Rw0G015050

monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00682
OG0001076
Physical Location & Seq
Forward (+)
20092 .. 22089
1998 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G015050.1

Sequence Viewer

Length: 516 bp
ATGGAAATTGCTTTGGATCTGGCAAACGATGGTGCAAAGACTTCAATCACTGTTCAAAGCCCGGTTCATTTTTTGTCAAGAAGGATGGTTTACTTGGCCTTGGTTTTGTTAAGATATCTTTCATTTAGCAAAGTGGACTCTTTGATGGTTTTGCTTAGCAAGCTGGGCCCTTTCTTTATGAAGATCAATTACAGCAAGTATCCGACCATTGATGTCGGCACCTGTAGTAAGATCAAGTCCGGCGAGATTCAGGTTTTACCCGCAGAAATAGGCAGCATAAGAGGAAGCGATGTGGAACTCAAAAAGGGGAAGTCGTACCAGTTTGAGTCCATCGTTTTCTGCACCGGATTCAAGACATCAACAAGTTTGTGGCTCAAGTTTGGAGCCAAAATTTGTTTAATCACCTCTCTTCGGGATACTTGCTACATTGAGATCCTTCCTACAGACAGGAATCCTACACAAGAATTAGAAAATGGGACAGTGCCTTGGTTGTTTCTACGAGGACCATTCTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00380 ko01100 map00380 map01100
Pfam Domains
Protein Families
FMO-like K_oxygenase Pyr_redox_3

Protein Analysis

171

Amino Acids

19.22

Weight (kDa)

9.03

Isoelectric Point (pI)

34.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 218
AciI CCGC 1 cut(s) 261
AclWI GGATC 2 cut(s) 24, 427
AcsI RAATTY 1 cut(s) 390
AfaI GTAC 1 cut(s) 317
AfiI CCNNNNNNNGG 1 cut(s) 411
AgsI TTSAA 3 cut(s) 45, 56, 352
AluBI AGCT 1 cut(s) 163
AluI AGCT 1 cut(s) 163
AlwI GGATC 2 cut(s) 24, 427
AoxI GGCC 2 cut(s) 96, 166
ApaI GGGCCC 1 cut(s) 170
ApeKI GCWGC 1 cut(s) 273
ApoI RAATTY 1 cut(s) 390
AspS9I GGNCC 3 cut(s) 166, 167, 503
AsuC2I CCSGG 1 cut(s) 62
AsuHPI GGTGA 1 cut(s) 394
AvaII GGWCC 1 cut(s) 503
BaeGI GKGCMC 1 cut(s) 170
BanI GGYRCC 1 cut(s) 218
BanII GRGCYC 1 cut(s) 170
BarI GAAGNNNNNNTAC 2 cut(s) 173, 205
BbvI GCAGC 1 cut(s) 285
BccI CCATC 4 cut(s) 23, 79, 139, 338
BciVI GTATCC 2 cut(s) 210, 409
BcnI CCSGG 1 cut(s) 62
BfmI CTRYAG 2 cut(s) 223, 441
BfuI GTATCC 2 cut(s) 210, 409
BisI GCNGC 1 cut(s) 274
BlpI GCTNAGC 1 cut(s) 155
BlsI GCNGC 1 cut(s) 275
Bme1390I CCNGG 1 cut(s) 62
Bme18I GGWCC 1 cut(s) 503
BmgT120I GGNCC 3 cut(s) 166, 167, 503
BmiI GGNNCC 3 cut(s) 168, 220, 385
BmrFI CCNGG 1 cut(s) 62
Bpu1102I GCTNAGC 1 cut(s) 155
BpuEI CTTGAG 1 cut(s) 359
BpuMI CCSGG 1 cut(s) 62
BsaJI CCNNGG 2 cut(s) 99, 485
BsaWI WCCGGW 1 cut(s) 344
Bsc4I CCNNNNNNNGG 1 cut(s) 411
Bse1I ACTGG 1 cut(s) 319
BseDI CCNNGG 2 cut(s) 99, 485
BseGI GGATG 1 cut(s) 90
BseLI CCNNNNNNNGG 1 cut(s) 411
BseNI ACTGG 1 cut(s) 319
BseSI GKGCMC 1 cut(s) 170
BseXI GCAGC 1 cut(s) 285
BseYI CCCAGC 1 cut(s) 163
BsgI GTGCAG 1 cut(s) 325
BshFI GGCC 2 cut(s) 98, 168
BshNI GGYRCC 1 cut(s) 218
BsiSI CCGG 3 cut(s) 62, 240, 345
BslFI GGGAC 1 cut(s) 490
BslI CCNNNNNNNGG 1 cut(s) 411
BsmFI GGGAC 1 cut(s) 490
BsnI GGCC 2 cut(s) 98, 168
Bsp120I GGGCCC 1 cut(s) 166
Bsp1286I GDGCHC 1 cut(s) 170
Bsp143I GATC 4 cut(s) 16, 183, 231, 432
Bsp1720I GCTNAGC 1 cut(s) 155
BspACI CCGC 1 cut(s) 261
BspANI GGCC 2 cut(s) 98, 168
BspLI GGNNCC 3 cut(s) 168, 220, 385
BspPI GGATC 2 cut(s) 24, 427
BspT107I GGYRCC 1 cut(s) 218
BsrI ACTGG 1 cut(s) 319
BssECI CCNNGG 2 cut(s) 99, 485
BssMI GATC 4 cut(s) 16, 183, 231, 432
BssT1I CCWWGG 2 cut(s) 99, 485
Bst4CI ACNGT 2 cut(s) 52, 481
Bst6I CTCTTC 1 cut(s) 414
BstC8I GCNNGC 1 cut(s) 161
BstDEI CTNAG 1 cut(s) 155
BstF5I GGATG 1 cut(s) 90
BstKTI GATC 4 cut(s) 19, 186, 234, 435
BstMBI GATC 4 cut(s) 16, 183, 231, 432
BstMWI GCNNNNNNNGC 2 cut(s) 160, 165
BstSCI CCNGG 1 cut(s) 60
BstSFI CTRYAG 2 cut(s) 223, 441
BstSLI GKGCMC 1 cut(s) 170
BstV1I GCAGC 1 cut(s) 285
BstX2I RGATCY 2 cut(s) 16, 432
BstYI RGATCY 2 cut(s) 16, 432
BsuI GTATCC 2 cut(s) 210, 409
BsuRI GGCC 2 cut(s) 98, 168
BtgZI GCGATG 1 cut(s) 303
BtsCI GGATG 1 cut(s) 90
BtsIMutI CAGTG 2 cut(s) 48, 486
Cac8I GCNNGC 1 cut(s) 161
Cfr13I GGNCC 3 cut(s) 166, 167, 503
Csp6I GTAC 1 cut(s) 316
CviJI RGCY 6 cut(s) 60, 98, 163, 168, 373, 386
CviKI_1 RGCY 6 cut(s) 60, 98, 163, 168, 373, 386
CviQI GTAC 1 cut(s) 316
DdeI CTNAG 1 cut(s) 155
DpnI GATC 4 cut(s) 18, 185, 233, 434
DpnII GATC 4 cut(s) 16, 183, 231, 432
Eam1104I CTCTTC 1 cut(s) 414
EarI CTCTTC 1 cut(s) 414
Eco130I CCWWGG 2 cut(s) 99, 485
Eco24I GRGCYC 1 cut(s) 170
Eco32I GATATC 1 cut(s) 116
Eco47I GGWCC 1 cut(s) 503
EcoO109I RGGNCCY 1 cut(s) 167
EcoRV GATATC 1 cut(s) 116
EcoT14I CCWWGG 2 cut(s) 99, 485
EcoT38I GRGCYC 1 cut(s) 170
ErhI CCWWGG 2 cut(s) 99, 485
FaiI YATR 2 cut(s) 179, 278
FaqI GGGAC 1 cut(s) 490
FauI CCCGC 1 cut(s) 268
Fnu4HI GCNGC 1 cut(s) 274
FokI GGATG 1 cut(s) 97
FriOI GRGCYC 1 cut(s) 170
Fsp4HI GCNGC 1 cut(s) 274
GluI GCNGC 1 cut(s) 274
GsaI CCCAGC 1 cut(s) 167
HaeIII GGCC 2 cut(s) 98, 168
HapII CCGG 3 cut(s) 62, 240, 345
HinfI GANTC 5 cut(s) 137, 247, 326, 348, 451
HpaII CCGG 3 cut(s) 62, 240, 345
HphI GGTGA 1 cut(s) 394
Hpy166II GTNNAC 2 cut(s) 91, 136
Hpy188I TCNGA 1 cut(s) 204
Hpy188III TCNNGA 3 cut(s) 78, 352, 413
Hpy8I GTNNAC 2 cut(s) 91, 136
HpyAV CCTTC 2 cut(s) 75, 446
HpyCH4III ACNGT 2 cut(s) 52, 481
HpyCH4V TGCA 2 cut(s) 35, 342
HpyF10VI GCNNNNNNNGC 2 cut(s) 160, 165
HpyF3I CTNAG 1 cut(s) 155
Kzo9I GATC 4 cut(s) 16, 183, 231, 432
LmnI GCTCC 1 cut(s) 383
LpnPI CCDG 9 cut(s) 5, 75, 149, 235, 236, 253, 332, 358, 433
Lsp1109I GCAGC 1 cut(s) 285
MalI GATC 4 cut(s) 18, 185, 233, 434
MboI GATC 4 cut(s) 16, 183, 231, 432
MboII GAAGA 2 cut(s) 193, 401
MflI RGATCY 2 cut(s) 16, 432
MhlI GDGCHC 1 cut(s) 170
MluCI AATT 4 cut(s) 6, 187, 390, 464
MlyI GAGTC 2 cut(s) 131, 335
MmeI TCCRAC 1 cut(s) 227
MnlI CCTC 3 cut(s) 275, 415, 494
MseI TTAA 2 cut(s) 110, 398
MspI CCGG 3 cut(s) 62, 240, 345
MspR9I CCNGG 1 cut(s) 62
MwoI GCNNNNNNNGC 2 cut(s) 160, 165
NciI CCSGG 1 cut(s) 62
NdeII GATC 4 cut(s) 16, 183, 231, 432
NlaIV GGNNCC 3 cut(s) 168, 220, 385
PfeI GAWTC 3 cut(s) 247, 348, 451
PkrI GCNGC 1 cut(s) 275
PleI GAGTC 2 cut(s) 131, 334
PpsI GAGTC 2 cut(s) 131, 334
PspFI CCCAGC 1 cut(s) 163
PspN4I GGNNCC 3 cut(s) 168, 220, 385
PspOMI GGGCCC 1 cut(s) 166
PspPI GGNCC 3 cut(s) 166, 167, 503
PsuI RGATCY 2 cut(s) 16, 432
RsaI GTAC 1 cut(s) 317
RsaNI GTAC 1 cut(s) 316
SaqAI TTAA 2 cut(s) 110, 398
SatI GCNGC 1 cut(s) 274
Sau3AI GATC 4 cut(s) 16, 183, 231, 432
Sau96I GGNCC 3 cut(s) 166, 167, 503
SchI GAGTC 2 cut(s) 131, 335
ScrFI CCNGG 1 cut(s) 62
SduI GDGCHC 1 cut(s) 170
SetI ASST 4 cut(s) 165, 224, 255, 407
SfcI CTRYAG 2 cut(s) 223, 441
SinI GGWCC 1 cut(s) 503
SmlI CTYRAG 1 cut(s) 374
SmoI CTYRAG 1 cut(s) 374
Sse9I AATT 4 cut(s) 6, 187, 390, 464
SsiI CCGC 1 cut(s) 261
StyD4I CCNGG 1 cut(s) 60
StyI CCWWGG 2 cut(s) 99, 485
TaaI ACNGT 2 cut(s) 52, 481
TasI AATT 4 cut(s) 6, 187, 390, 464
TfiI GAWTC 3 cut(s) 247, 348, 451
Tru1I TTAA 2 cut(s) 110, 398
Tru9I TTAA 2 cut(s) 110, 398
TscAI CASTG 2 cut(s) 55, 486
TseI GCWGC 1 cut(s) 273
TspDTI ATGAA 3 cut(s) 56, 111, 194
TspRI CASTG 2 cut(s) 55, 486
VpaK11BI GGWCC 1 cut(s) 503
XapI RAATTY 1 cut(s) 390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.