RLG00000001339

monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0001076
Physical Location & Seq
Forward (+)
14320369 .. 14321157
789 bp
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UTR
Exon/CDS
Intron
RLM00000001339

Sequence Viewer

Length: 396 bp
ATGGAAATTGCTTTGGATCTGGCAAACGATGGTGCAAAGACTTCAATCATTGTTCAAAGCCCGGTTCATTTTTTGTCAAGAAGGATGGTTTACTTGGCCTTGGTTTTGTTAAGATATCTTTCATTTAGCAAAGTGGATTCTTTGATGGTTTTGCTAATTAGCAAGCTGGTTTATGGAGACCTGACCCAAGTACGGGATAGCCAGGCCAAAAGAGGGCCCTTTCTTTATGAAGATCAAGTTTTACCTGCAGAAATAGGCAGCATAAGAGGAAGCGATGTGGAACGCAAAAAGGAGAAGTCATACCAGTTTGAGTCCATCGTTTTCTGCACCAGATTCAAGGCATCAACAAGTTTGTGGCTCAAGGCAGATGATTATCTTTTGAAAGAAGATAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00380 ko01100 map00380 map01100
Pfam Domains
Protein Families
FMO-like K_oxygenase Pyr_redox_3

Protein Analysis

132

Amino Acids

14.96

Weight (kDa)

7.79

Isoelectric Point (pI)

34.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 253
AclWI GGATC 1 cut(s) 24
AfaI GTAC 1 cut(s) 192
AfiI CCNNNNNNNGG 3 cut(s) 192, 193, 213
AgsI TTSAA 4 cut(s) 45, 56, 337, 382
AjnI CCWGG 1 cut(s) 201
AluBI AGCT 1 cut(s) 166
AluI AGCT 1 cut(s) 166
Alw26I GTCTC 1 cut(s) 171
AlwI GGATC 1 cut(s) 24
AoxI GGCC 3 cut(s) 96, 204, 215
ApaI GGGCCC 1 cut(s) 219
ApeKI GCWGC 1 cut(s) 258
AspS9I GGNCC 2 cut(s) 215, 216
AsuC2I CCSGG 1 cut(s) 62
BaeGI GKGCMC 1 cut(s) 219
BanII GRGCYC 1 cut(s) 219
BbvI GCAGC 1 cut(s) 270
BccI CCATC 4 cut(s) 23, 79, 139, 323
BciT130I CCWGG 1 cut(s) 203
BcnI CCSGG 1 cut(s) 62
BcoDI GTCTC 1 cut(s) 171
BfmI CTRYAG 1 cut(s) 246
BfuAI ACCTGC 1 cut(s) 253
BisI GCNGC 1 cut(s) 259
BlsI GCNGC 1 cut(s) 260
Bme1390I CCNGG 2 cut(s) 62, 203
BmgT120I GGNCC 2 cut(s) 215, 216
BmiI GGNNCC 1 cut(s) 217
BmrFI CCNGG 2 cut(s) 62, 203
BmsI GCATC 1 cut(s) 350
BpuEI CTTGAG 1 cut(s) 344
BpuMI CCSGG 1 cut(s) 62
BsaBI GATNNNNATC 1 cut(s) 372
BsaI GGTCTC 1 cut(s) 171
BsaJI CCNNGG 1 cut(s) 99
Bsc4I CCNNNNNNNGG 3 cut(s) 192, 193, 213
Bse1I ACTGG 1 cut(s) 304
Bse8I GATNNNNATC 1 cut(s) 372
BseBI CCWGG 1 cut(s) 203
BseDI CCNNGG 1 cut(s) 99
BseGI GGATG 1 cut(s) 90
BseJI GATNNNNATC 1 cut(s) 372
BseLI CCNNNNNNNGG 3 cut(s) 192, 193, 213
BseNI ACTGG 1 cut(s) 304
BseSI GKGCMC 1 cut(s) 219
BseXI GCAGC 1 cut(s) 270
BsgI GTGCAG 1 cut(s) 310
BshFI GGCC 3 cut(s) 98, 206, 217
BsiSI CCGG 1 cut(s) 62
BslI CCNNNNNNNGG 3 cut(s) 192, 193, 213
BsmAI GTCTC 1 cut(s) 171
BsnI GGCC 3 cut(s) 98, 206, 217
Bso31I GGTCTC 1 cut(s) 171
Bsp120I GGGCCC 1 cut(s) 215
Bsp1286I GDGCHC 1 cut(s) 219
Bsp143I GATC 2 cut(s) 16, 232
BspANI GGCC 3 cut(s) 98, 206, 217
BspLI GGNNCC 1 cut(s) 217
BspMAI CTGCAG 1 cut(s) 250
BspMI ACCTGC 1 cut(s) 253
BspPI GGATC 1 cut(s) 24
BspTNI GGTCTC 1 cut(s) 171
BsrI ACTGG 1 cut(s) 304
BssECI CCNNGG 1 cut(s) 99
BssMI GATC 2 cut(s) 16, 232
BssT1I CCWWGG 1 cut(s) 99
Bst2UI CCWGG 1 cut(s) 203
BstC8I GCNNGC 1 cut(s) 164
BstF5I GGATG 1 cut(s) 90
BstKTI GATC 2 cut(s) 19, 235
BstMAI GTCTC 1 cut(s) 171
BstMBI GATC 2 cut(s) 16, 232
BstNI CCWGG 1 cut(s) 203
BstSCI CCNGG 2 cut(s) 60, 201
BstSFI CTRYAG 1 cut(s) 246
BstSLI GKGCMC 1 cut(s) 219
BstV1I GCAGC 1 cut(s) 270
BstX2I RGATCY 1 cut(s) 16
BstYI RGATCY 1 cut(s) 16
BsuRI GGCC 3 cut(s) 98, 206, 217
BtgZI GCGATG 1 cut(s) 288
BtsCI GGATG 1 cut(s) 90
BveI ACCTGC 1 cut(s) 253
Cac8I GCNNGC 1 cut(s) 164
Cfr13I GGNCC 2 cut(s) 215, 216
Csp6I GTAC 1 cut(s) 191
CviJI RGCY 7 cut(s) 60, 98, 166, 201, 206, 217, 358
CviKI_1 RGCY 7 cut(s) 60, 98, 166, 201, 206, 217, 358
CviQI GTAC 1 cut(s) 191
DpnI GATC 2 cut(s) 18, 234
DpnII GATC 2 cut(s) 16, 232
Eco130I CCWWGG 1 cut(s) 99
Eco24I GRGCYC 1 cut(s) 219
Eco31I GGTCTC 1 cut(s) 171
Eco32I GATATC 1 cut(s) 116
EcoO109I RGGNCCY 2 cut(s) 215, 216
EcoRII CCWGG 1 cut(s) 201
EcoRV GATATC 1 cut(s) 116
EcoT14I CCWWGG 1 cut(s) 99
EcoT38I GRGCYC 1 cut(s) 219
ErhI CCWWGG 1 cut(s) 99
FaiI YATR 4 cut(s) 174, 228, 263, 301
Fnu4HI GCNGC 1 cut(s) 259
FokI GGATG 1 cut(s) 97
FriOI GRGCYC 1 cut(s) 219
Fsp4HI GCNGC 1 cut(s) 259
GluI GCNGC 1 cut(s) 259
HaeIII GGCC 3 cut(s) 98, 206, 217
HapII CCGG 1 cut(s) 62
HinfI GANTC 3 cut(s) 137, 311, 333
HpaII CCGG 1 cut(s) 62
Hpy166II GTNNAC 1 cut(s) 91
Hpy188III TCNNGA 1 cut(s) 78
Hpy8I GTNNAC 1 cut(s) 91
HpyAV CCTTC 1 cut(s) 75
HpyCH4V TGCA 3 cut(s) 35, 248, 327
Kzo9I GATC 2 cut(s) 16, 232
LpnPI CCDG 9 cut(s) 5, 75, 152, 188, 194, 215, 258, 317, 343
Lsp1109I GCAGC 1 cut(s) 270
LweI GCATC 1 cut(s) 350
MalI GATC 2 cut(s) 18, 234
MboI GATC 2 cut(s) 16, 232
MboII GAAGA 1 cut(s) 242
MflI RGATCY 1 cut(s) 16
MhlI GDGCHC 1 cut(s) 219
MluCI AATT 3 cut(s) 6, 156, 391
MlyI GAGTC 1 cut(s) 320
MnlI CCTC 2 cut(s) 206, 260
MseI TTAA 1 cut(s) 110
MspI CCGG 1 cut(s) 62
MspR9I CCNGG 2 cut(s) 62, 203
MvaI CCWGG 1 cut(s) 203
NciI CCSGG 1 cut(s) 62
NdeII GATC 2 cut(s) 16, 232
NlaIV GGNNCC 1 cut(s) 217
PfeI GAWTC 2 cut(s) 137, 333
PkrI GCNGC 1 cut(s) 260
PleI GAGTC 1 cut(s) 319
PpsI GAGTC 1 cut(s) 319
Psp6I CCWGG 1 cut(s) 201
PspGI CCWGG 1 cut(s) 201
PspN4I GGNNCC 1 cut(s) 217
PspOMI GGGCCC 1 cut(s) 215
PspPI GGNCC 2 cut(s) 215, 216
PstI CTGCAG 1 cut(s) 250
PsuI RGATCY 1 cut(s) 16
RsaI GTAC 1 cut(s) 192
RsaNI GTAC 1 cut(s) 191
SaqAI TTAA 1 cut(s) 110
SatI GCNGC 1 cut(s) 259
Sau3AI GATC 2 cut(s) 16, 232
Sau96I GGNCC 2 cut(s) 215, 216
SchI GAGTC 1 cut(s) 320
ScrFI CCNGG 2 cut(s) 62, 203
SduI GDGCHC 1 cut(s) 219
SetI ASST 3 cut(s) 168, 183, 247
SfaNI GCATC 1 cut(s) 350
SfcI CTRYAG 1 cut(s) 246
SmlI CTYRAG 1 cut(s) 359
SmoI CTYRAG 1 cut(s) 359
Sse9I AATT 3 cut(s) 6, 156, 391
StyD4I CCNGG 2 cut(s) 60, 201
StyI CCWWGG 1 cut(s) 99
TasI AATT 3 cut(s) 6, 156, 391
TfiI GAWTC 2 cut(s) 137, 333
Tru1I TTAA 1 cut(s) 110
Tru9I TTAA 1 cut(s) 110
TseI GCWGC 1 cut(s) 258
TspDTI ATGAA 3 cut(s) 56, 111, 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.