pycom07g02160

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
1735295 .. 1736012
718 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g02160.2

Sequence Viewer

Length: 408 bp
ATGGAAGATGGACAAAAATGCAGCGATTCAGTTGGTTGGAGTGATCAAATCCAATTCCGGACTCCACCAGCAGGAGGATCTGATGAACTCAAATTTCTTGCATTTGGCGACATGGGAAAGGCTCCTCGGGATTCTTCAACGATGCATTACATTCAGCCAGGATCTCTTTCAGTGATTCAAGCCGTGGCCAATGAAATAAATTCCGGGAATGTAGACTCTATCTTCCACATTGGAGACATTAGCTATGCCACAGGATTTTTAGTTGAATGGGATCTTTTCCTTCAACAAATCAGTCCGGTCGCTTCTCGAGTTTCTTACATGACAGCAATAGGAAACCATGAGAGGTATGCTCTTTTATTATTGCCAATATTTTTTATACGCTACGGATACTGGAGACGATTTCATTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

136

Amino Acids

15.17

Weight (kDa)

5.41

Isoelectric Point (pI)

48.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 213
AccIII TCCGGA 1 cut(s) 57
AclWI GGATC 3 cut(s) 85, 169, 279
AcoI YGGCCR 1 cut(s) 186
AcsI RAATTY 2 cut(s) 92, 199
AfiI CCNNNNNNNGG 2 cut(s) 71, 74
AgsI TTSAA 4 cut(s) 138, 179, 266, 284
AjnI CCWGG 1 cut(s) 157
AluBI AGCT 1 cut(s) 243
AluI AGCT 1 cut(s) 243
Alw26I GTCTC 2 cut(s) 228, 388
AlwI GGATC 3 cut(s) 85, 169, 279
Ama87I CYCGRG 2 cut(s) 126, 306
Aor13HI TCCGGA 1 cut(s) 57
AoxI GGCC 1 cut(s) 186
ApeKI GCWGC 1 cut(s) 21
ApoI RAATTY 2 cut(s) 92, 199
AsuC2I CCSGG 1 cut(s) 205
AvaI CYCGRG 2 cut(s) 126, 306
BalI TGGCCA 1 cut(s) 188
BbvI GCAGC 1 cut(s) 33
BccI CCATC 1 cut(s) 2
BceAI ACGGC 1 cut(s) 167
BciT130I CCWGG 1 cut(s) 159
BciVI GTATCC 1 cut(s) 380
BclI TGATCA 1 cut(s) 43
BcnI CCSGG 1 cut(s) 205
BcoDI GTCTC 2 cut(s) 228, 388
BfuI GTATCC 1 cut(s) 380
BisI GCNGC 1 cut(s) 22
BlsI GCNGC 1 cut(s) 23
Bme1390I CCNGG 2 cut(s) 159, 205
BmeT110I CYCGRG 2 cut(s) 126, 306
BmiI GGNNCC 1 cut(s) 123
BmrFI CCNGG 2 cut(s) 159, 205
BmsI GCATC 1 cut(s) 132
BplI GAGNNNNNCTC 2 cut(s) 334, 366
BpuMI CCSGG 1 cut(s) 205
BsaJI CCNNGG 2 cut(s) 125, 183
BsaWI WCCGGW 2 cut(s) 57, 295
Bsc4I CCNNNNNNNGG 2 cut(s) 71, 74
Bse1I ACTGG 1 cut(s) 395
BseAI TCCGGA 1 cut(s) 57
BseBI CCWGG 1 cut(s) 159
BseDI CCNNGG 2 cut(s) 125, 183
BseLI CCNNNNNNNGG 2 cut(s) 71, 74
BseNI ACTGG 1 cut(s) 395
BseRI GAGGAG 1 cut(s) 114
BseXI GCAGC 1 cut(s) 33
Bsh1285I CGRYCG 1 cut(s) 300
BshFI GGCC 1 cut(s) 188
BsiEI CGRYCG 1 cut(s) 300
BsiHKCI CYCGRG 2 cut(s) 126, 306
BsiSI CCGG 3 cut(s) 58, 204, 296
BslI CCNNNNNNNGG 2 cut(s) 71, 74
BsmAI GTCTC 2 cut(s) 228, 388
BsmBI CGTCTC 1 cut(s) 388
BsnI GGCC 1 cut(s) 188
BsoBI CYCGRG 2 cut(s) 126, 306
Bsp13I TCCGGA 1 cut(s) 57
Bsp143I GATC 4 cut(s) 43, 77, 161, 271
BspANI GGCC 1 cut(s) 188
BspEI TCCGGA 1 cut(s) 57
BspLI GGNNCC 1 cut(s) 123
BspPI GGATC 3 cut(s) 85, 169, 279
BsrI ACTGG 1 cut(s) 395
BssECI CCNNGG 2 cut(s) 125, 183
BssMI GATC 4 cut(s) 43, 77, 161, 271
Bst2UI CCWGG 1 cut(s) 159
BstDSI CCRYGG 1 cut(s) 183
BstKTI GATC 4 cut(s) 46, 80, 164, 274
BstMAI GTCTC 2 cut(s) 228, 388
BstMBI GATC 4 cut(s) 43, 77, 161, 271
BstMCI CGRYCG 1 cut(s) 300
BstNI CCWGG 1 cut(s) 159
BstSCI CCNGG 2 cut(s) 157, 203
BstV1I GCAGC 1 cut(s) 33
BstX2I RGATCY 3 cut(s) 77, 161, 271
BstYI RGATCY 3 cut(s) 77, 161, 271
BsuI GTATCC 1 cut(s) 380
BsuRI GGCC 1 cut(s) 188
BtgI CCRYGG 1 cut(s) 183
BtsIMutI CAGTG 1 cut(s) 177
CviAII CATG 3 cut(s) 112, 319, 338
CviJI RGCY 5 cut(s) 122, 157, 182, 188, 243
CviKI_1 RGCY 5 cut(s) 122, 157, 182, 188, 243
DpnI GATC 4 cut(s) 45, 79, 163, 273
DpnII GATC 4 cut(s) 43, 77, 161, 271
EaeI YGGCCR 1 cut(s) 186
Eco88I CYCGRG 2 cut(s) 126, 306
EcoRII CCWGG 1 cut(s) 157
EcoT22I ATGCAT 1 cut(s) 147
Esp3I CGTCTC 1 cut(s) 388
FaeI CATG 3 cut(s) 115, 322, 341
FaiI YATR 6 cut(s) 113, 246, 320, 339, 348, 377
FatI CATG 3 cut(s) 111, 318, 337
FbaI TGATCA 1 cut(s) 43
FblI GTMKAC 1 cut(s) 213
Fnu4HI GCNGC 1 cut(s) 22
Fsp4HI GCNGC 1 cut(s) 22
GluI GCNGC 1 cut(s) 22
HaeIII GGCC 1 cut(s) 188
HapII CCGG 3 cut(s) 58, 204, 296
Hin1II CATG 3 cut(s) 115, 322, 341
HinfI GANTC 5 cut(s) 26, 61, 131, 175, 215
HpaII CCGG 3 cut(s) 58, 204, 296
Hpy166II GTNNAC 1 cut(s) 214
Hpy188I TCNGA 1 cut(s) 82
Hpy188III TCNNGA 3 cut(s) 58, 128, 306
Hpy8I GTNNAC 1 cut(s) 214
HpyAV CCTTC 1 cut(s) 290
HpyCH4V TGCA 3 cut(s) 21, 101, 145
Hsp92II CATG 3 cut(s) 115, 322, 341
Kpn2I TCCGGA 1 cut(s) 57
Ksp22I TGATCA 1 cut(s) 43
Kzo9I GATC 4 cut(s) 43, 77, 161, 271
LmnI GCTCC 1 cut(s) 127
LpnPI CCDG 9 cut(s) 57, 71, 81, 144, 171, 217, 237, 309, 376
Lsp1109I GCAGC 1 cut(s) 33
LweI GCATC 1 cut(s) 132
MalI GATC 4 cut(s) 45, 79, 163, 273
MboI GATC 4 cut(s) 43, 77, 161, 271
MboII GAAGA 3 cut(s) 17, 126, 214
MflI RGATCY 3 cut(s) 77, 161, 271
MlsI TGGCCA 1 cut(s) 188
MluCI AATT 3 cut(s) 53, 92, 199
MluNI TGGCCA 1 cut(s) 188
MlyI GAGTC 2 cut(s) 55, 209
MmeI TCCRAC 1 cut(s) 17
MnlI CCTC 3 cut(s) 68, 135, 336
Mox20I TGGCCA 1 cut(s) 188
Mph1103I ATGCAT 1 cut(s) 147
MroI TCCGGA 1 cut(s) 57
MscI TGGCCA 1 cut(s) 188
MseI TTAA 1 cut(s) 406
Msp20I TGGCCA 1 cut(s) 188
MspI CCGG 3 cut(s) 58, 204, 296
MspR9I CCNGG 2 cut(s) 159, 205
MvaI CCWGG 1 cut(s) 159
NciI CCSGG 1 cut(s) 205
NdeII GATC 4 cut(s) 43, 77, 161, 271
NlaIII CATG 3 cut(s) 115, 322, 341
NlaIV GGNNCC 1 cut(s) 123
NsiI ATGCAT 1 cut(s) 147
PaeR7I CTCGAG 1 cut(s) 306
PfeI GAWTC 3 cut(s) 26, 131, 175
PfoI TCCNGGA 1 cut(s) 203
PkrI GCNGC 1 cut(s) 23
PleI GAGTC 2 cut(s) 55, 209
PpsI GAGTC 2 cut(s) 55, 209
Psp6I CCWGG 1 cut(s) 157
PspGI CCWGG 1 cut(s) 157
PspN4I GGNNCC 1 cut(s) 123
PsuI RGATCY 3 cut(s) 77, 161, 271
SaqAI TTAA 1 cut(s) 406
SatI GCNGC 1 cut(s) 22
Sau3AI GATC 4 cut(s) 43, 77, 161, 271
SchI GAGTC 2 cut(s) 55, 209
ScrFI CCNGG 2 cut(s) 159, 205
SetI ASST 2 cut(s) 245, 347
SfaNI GCATC 1 cut(s) 132
Sfr274I CTCGAG 1 cut(s) 306
SlaI CTCGAG 1 cut(s) 306
SmlI CTYRAG 1 cut(s) 306
SmoI CTYRAG 1 cut(s) 306
Sse9I AATT 3 cut(s) 53, 92, 199
SspI AATATT 1 cut(s) 369
StyD4I CCNGG 2 cut(s) 157, 203
TaqI TCGA 1 cut(s) 307
TasI AATT 3 cut(s) 53, 92, 199
TfiI GAWTC 3 cut(s) 26, 131, 175
Tru1I TTAA 1 cut(s) 406
Tru9I TTAA 1 cut(s) 406
TscAI CASTG 1 cut(s) 177
TseI GCWGC 1 cut(s) 21
TspDTI ATGAA 3 cut(s) 99, 207, 392
TspGWI ACGGA 1 cut(s) 399
TspRI CASTG 1 cut(s) 177
XapI RAATTY 2 cut(s) 92, 199
XhoI CTCGAG 1 cut(s) 306
XmiI GTMKAC 1 cut(s) 213
Zsp2I ATGCAT 1 cut(s) 147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.