Rh7AG159500

Purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0002404
Physical Location & Seq
Reverse (-)
13367708 .. 13369655
1948 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG159500.1

Sequence Viewer

Length: 621 bp
ATGACTTCAAGTATAATGTCATATTTTCTTGTTTACTTAATTCTATATATGCTTGCTTCTACACTTTTCAGGGACTATATAGACTCTGGATCAGTGTACATTCTTGCAGATTCAGGTGGGGAAGTTGGAGTTCCCTATGAGACTTACTTTCCAATGCCAACCCCAGCAAAGGATAAACCATGGTATTCCATAGAACAAGGAAGCGTCCACATCACGATGATTTCAACAGAGCATGACTGGACCAAAAATTCTGAGCAGTATCAATGGATGAAAAAGGACATGGCTTCATTTGATCGATCTAAAACTCCTTGGTTGATATTTATGGGGCATAGACCAATGTATACATCTGCCCCTGGATTCCTGAGTGTTGATGAGAAATTCGTTGACAAAGTTGAACCATTACTTCTGGCAAGCAAAGTTGATCTGGCGCTGTTTGGTCATGTCCATAACTACGAGCGAACCTGCTCCATTTATAAGAGCCAATGCATGAAATTGCCTTGCAAAGATGAGGCTGGGATCGACACATATGATCACAGCAACTACAGTGCCCCAGTGCAAGCCATAATTGGAATGGCTGGCTTTTCCTTGGACAAGTTTCCCAGTGGTGTAAGTCCTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003993 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0044237
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos Metallophos_C Pur_ac_phosph_N

Protein Analysis

206

Amino Acids

23.32

Weight (kDa)

5.44

Isoelectric Point (pI)

41.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 77 - 151 5.5e-08 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 474
Acc36I ACCTGC 1 cut(s) 470
AccI GTMKAC 1 cut(s) 341
AclWI GGATC 2 cut(s) 97, 524
AcsI RAATTY 2 cut(s) 247, 377
AfaI GTAC 1 cut(s) 98
AfiI CCNNNNNNNGG 1 cut(s) 169
AgsI TTSAA 3 cut(s) 9, 225, 395
AjnI CCWGG 1 cut(s) 352
Alw26I GTCTC 1 cut(s) 134
AlwI GGATC 2 cut(s) 97, 524
ApoI RAATTY 2 cut(s) 247, 377
AspLEI GCGC 1 cut(s) 430
AspS9I GGNCC 1 cut(s) 240
AvaII GGWCC 1 cut(s) 240
BaeGI GKGCMC 1 cut(s) 550
BciT130I CCWGG 1 cut(s) 354
BclI TGATCA 1 cut(s) 529
BcoDI GTCTC 1 cut(s) 134
BfmI CTRYAG 1 cut(s) 541
BfoI RGCGCY 1 cut(s) 431
BfuAI ACCTGC 1 cut(s) 470
Bme1390I CCNGG 1 cut(s) 354
Bme18I GGWCC 1 cut(s) 240
BmgT120I GGNCC 1 cut(s) 240
BmrFI CCNGG 1 cut(s) 354
BmrI ACTGGG 2 cut(s) 545, 594
BmuI ACTGGG 2 cut(s) 545, 594
Bsa29I ATCGAT 1 cut(s) 295
BsaJI CCNNGG 4 cut(s) 179, 308, 352, 585
Bsc4I CCNNNNNNNGG 1 cut(s) 169
Bse1I ACTGG 3 cut(s) 242, 551, 600
BseBI CCWGG 1 cut(s) 354
BseCI ATCGAT 1 cut(s) 295
BseDI CCNNGG 4 cut(s) 179, 308, 352, 585
BseGI GGATG 1 cut(s) 273
BseLI CCNNNNNNNGG 1 cut(s) 169
BseMII CTCAG 2 cut(s) 243, 353
BseNI ACTGG 3 cut(s) 242, 551, 600
BseSI GKGCMC 1 cut(s) 550
BseYI CCCAGC 2 cut(s) 163, 512
BshVI ATCGAT 1 cut(s) 295
BslFI GGGAC 1 cut(s) 86
BslI CCNNNNNNNGG 1 cut(s) 169
BsmAI GTCTC 1 cut(s) 134
BsmFI GGGAC 1 cut(s) 86
Bsp1286I GDGCHC 1 cut(s) 550
Bsp1407I TGTACA 1 cut(s) 96
Bsp143I GATC 6 cut(s) 89, 292, 296, 421, 516, 529
Bsp19I CCATGG 1 cut(s) 179
BspCNI CTCAG 2 cut(s) 244, 354
BspDI ATCGAT 1 cut(s) 295
BspMI ACCTGC 1 cut(s) 470
BspPI GGATC 2 cut(s) 97, 524
BsrGI TGTACA 1 cut(s) 96
BsrI ACTGG 3 cut(s) 242, 551, 600
BssECI CCNNGG 4 cut(s) 179, 308, 352, 585
BssMI GATC 6 cut(s) 89, 292, 296, 421, 516, 529
BssNAI GTATAC 1 cut(s) 342
BssT1I CCWWGG 3 cut(s) 179, 308, 585
Bst1107I GTATAC 1 cut(s) 342
Bst2UI CCWGG 1 cut(s) 354
Bst4CI ACNGT 1 cut(s) 545
BstAUI TGTACA 1 cut(s) 96
BstC8I GCNNGC 4 cut(s) 54, 412, 558, 577
BstDEI CTNAG 2 cut(s) 252, 362
BstDSI CCRYGG 1 cut(s) 179
BstF5I GGATG 1 cut(s) 273
BstH2I RGCGCY 1 cut(s) 431
BstHHI GCGC 1 cut(s) 430
BstKTI GATC 6 cut(s) 92, 295, 299, 424, 519, 532
BstMAI GTCTC 1 cut(s) 134
BstMBI GATC 6 cut(s) 89, 292, 296, 421, 516, 529
BstNI CCWGG 1 cut(s) 354
BstSCI CCNGG 1 cut(s) 352
BstSFI CTRYAG 1 cut(s) 541
BstSLI GKGCMC 1 cut(s) 550
BstZ17I GTATAC 1 cut(s) 342
Bsu15I ATCGAT 1 cut(s) 295
BsuTUI ATCGAT 1 cut(s) 295
BtgI CCRYGG 1 cut(s) 179
BtsCI GGATG 1 cut(s) 273
BtsIMutI CAGTG 4 cut(s) 99, 550, 558, 607
BveI ACCTGC 1 cut(s) 470
Cac8I GCNNGC 4 cut(s) 54, 412, 558, 577
CfoI GCGC 1 cut(s) 430
Cfr13I GGNCC 1 cut(s) 240
ClaI ATCGAT 1 cut(s) 295
CseI GACGC 1 cut(s) 193
Csp6I GTAC 1 cut(s) 97
CviAII CATG 5 cut(s) 180, 233, 280, 440, 487
CviJI RGCY 6 cut(s) 284, 480, 512, 560, 575, 579
CviKI_1 RGCY 6 cut(s) 284, 480, 512, 560, 575, 579
CviQI GTAC 1 cut(s) 97
DdeI CTNAG 2 cut(s) 252, 362
DpnI GATC 6 cut(s) 91, 294, 298, 423, 518, 531
DpnII GATC 6 cut(s) 89, 292, 296, 421, 516, 529
Eco130I CCWWGG 3 cut(s) 179, 308, 585
Eco47I GGWCC 1 cut(s) 240
EcoRII CCWGG 1 cut(s) 352
EcoT14I CCWWGG 3 cut(s) 179, 308, 585
EcoT22I ATGCAT 1 cut(s) 488
ErhI CCWWGG 3 cut(s) 179, 308, 585
FaeI CATG 5 cut(s) 183, 236, 283, 443, 490
FalI AAGNNNNNCTT 1 cut(s) 601
FaqI GGGAC 1 cut(s) 86
FatI CATG 5 cut(s) 179, 232, 279, 439, 486
FauNDI CATATG 1 cut(s) 526
FbaI TGATCA 1 cut(s) 529
FblI GTMKAC 1 cut(s) 341
FokI GGATG 1 cut(s) 280
GlaI GCGC 1 cut(s) 429
GsaI CCCAGC 2 cut(s) 167, 516
HaeII RGCGCY 1 cut(s) 431
HgaI GACGC 1 cut(s) 193
HhaI GCGC 1 cut(s) 430
Hin1II CATG 5 cut(s) 183, 236, 283, 443, 490
Hin6I GCGC 1 cut(s) 428
HinP1I GCGC 1 cut(s) 428
HincII GTYRAC 1 cut(s) 385
HindII GTYRAC 1 cut(s) 385
HinfI GANTC 3 cut(s) 83, 110, 357
Hpy166II GTNNAC 5 cut(s) 34, 97, 208, 342, 385
Hpy188I TCNGA 1 cut(s) 253
Hpy188III TCNNGA 4 cut(s) 87, 214, 361, 618
Hpy8I GTNNAC 5 cut(s) 34, 97, 208, 342, 385
HpyCH4III ACNGT 1 cut(s) 545
HpyCH4V TGCA 4 cut(s) 107, 486, 501, 556
HpyF3I CTNAG 2 cut(s) 252, 362
Hsp92II CATG 5 cut(s) 183, 236, 283, 443, 490
HspAI GCGC 1 cut(s) 428
Ksp22I TGATCA 1 cut(s) 529
Kzo9I GATC 6 cut(s) 89, 292, 296, 421, 516, 529
LmnI GCTCC 1 cut(s) 470
MalI GATC 6 cut(s) 91, 294, 298, 423, 518, 531
MboI GATC 6 cut(s) 89, 292, 296, 421, 516, 529
MhlI GDGCHC 1 cut(s) 550
MluCI AATT 5 cut(s) 39, 247, 377, 491, 564
MlyI GAGTC 1 cut(s) 77
MmeI TCCRAC 1 cut(s) 106
MnlI CCTC 1 cut(s) 502
Mph1103I ATGCAT 1 cut(s) 488
MseI TTAA 1 cut(s) 38
MslI CAYNNNNRTG 1 cut(s) 215
MspR9I CCNGG 1 cut(s) 354
MvaI CCWGG 1 cut(s) 354
NcoI CCATGG 1 cut(s) 179
NdeI CATATG 1 cut(s) 526
NdeII GATC 6 cut(s) 89, 292, 296, 421, 516, 529
NlaIII CATG 5 cut(s) 183, 236, 283, 443, 490
NsiI ATGCAT 1 cut(s) 488
PfeI GAWTC 2 cut(s) 110, 357
PleI GAGTC 1 cut(s) 77
PpsI GAGTC 1 cut(s) 77
PsiI TTATAA 1 cut(s) 474
Psp6I CCWGG 1 cut(s) 352
PspFI CCCAGC 2 cut(s) 163, 512
PspGI CCWGG 1 cut(s) 352
PspPI GGNCC 1 cut(s) 240
RsaI GTAC 1 cut(s) 98
RsaNI GTAC 1 cut(s) 97
RseI CAYNNNNRTG 1 cut(s) 215
SaqAI TTAA 1 cut(s) 38
Sau3AI GATC 6 cut(s) 89, 292, 296, 421, 516, 529
Sau96I GGNCC 1 cut(s) 240
SchI GAGTC 1 cut(s) 77
ScrFI CCNGG 1 cut(s) 354
SduI GDGCHC 1 cut(s) 550
SetI ASST 2 cut(s) 118, 464
SfcI CTRYAG 1 cut(s) 541
SinI GGWCC 1 cut(s) 240
SmiMI CAYNNNNRTG 1 cut(s) 215
Sse9I AATT 5 cut(s) 39, 247, 377, 491, 564
StyD4I CCNGG 1 cut(s) 352
StyI CCWWGG 3 cut(s) 179, 308, 585
TaaI ACNGT 1 cut(s) 545
TaqI TCGA 2 cut(s) 295, 519
TasI AATT 5 cut(s) 39, 247, 377, 491, 564
TatI WGTACW 1 cut(s) 96
TfiI GAWTC 2 cut(s) 110, 357
Tru1I TTAA 1 cut(s) 38
Tru9I TTAA 1 cut(s) 38
TscAI CASTG 4 cut(s) 99, 550, 558, 607
TspDTI ATGAA 3 cut(s) 276, 284, 503
TspRI CASTG 4 cut(s) 99, 550, 558, 607
VpaK11BI GGWCC 1 cut(s) 240
XapI RAATTY 2 cut(s) 247, 377
XcmI CCANNNNNNNNNTGG 1 cut(s) 568
XmiI GTMKAC 1 cut(s) 341
Zsp2I ATGCAT 1 cut(s) 488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.