gamma-irradiation and mitomycin c induced
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 416, 819 |
| AarI | CACCTGC | 1 cut(s) | 971 |
| Acc16I | TGCGCA | 1 cut(s) | 2888 |
| Acc36I | ACCTGC | 3 cut(s) | 702, 971, 2856 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 584 |
| AccI | GTMKAC | 1 cut(s) | 2529 |
| AccII | CGCG | 2 cut(s) | 3722, 3804 |
| AccIII | TCCGGA | 1 cut(s) | 3893 |
| AcoI | YGGCCR | 1 cut(s) | 1711 |
| AcuI | CTGAAG | 5 cut(s) | 251, 884, 1677, 2816, 3537 |
| AdeI | CACNNNGTG | 1 cut(s) | 3508 |
| AfaI | GTAC | 9 cut(s) | 332, 569, 1929, 1975, 2339, 2574, 2717, 3185, 3388 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 171, 469, 584, 912, 2671, 3265, 3371, 3709 |
| AflII | CTTAAG | 2 cut(s) | 1118, 1730 |
| AflIII | ACRYGT | 2 cut(s) | 333, 1647 |
| AjiI | CACGTC | 1 cut(s) | 336 |
| AjnI | CCWGG | 8 cut(s) | 84, 463, 543, 665, 1700, 2172, 2743, 3729 |
| AleI | CACNNNNGTG | 2 cut(s) | 217, 3261 |
| Alw21I | GWGCWC | 3 cut(s) | 36, 3244, 3567 |
| Alw26I | GTCTC | 7 cut(s) | 335, 394, 1077, 1237, 1308, 1361, 3067 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 67, 1462, 3302, 3422, 3853 |
| Ama87I | CYCGRG | 2 cut(s) | 106, 3245 |
| Aor13HI | TCCGGA | 1 cut(s) | 3893 |
| AoxI | GGCC | 8 cut(s) | 87, 460, 1275, 1711, 1841, 2495, 3362, 3520 |
| ApeKI | GCWGC | 9 cut(s) | 1197, 1433, 3050, 3233, 3302, 3623, 3743, 3776, 3844 |
| AseI | ATTAAT | 1 cut(s) | 641 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3407 |
| AspLEI | GCGC | 1 cut(s) | 2889 |
| AspS9I | GGNCC | 9 cut(s) | 461, 541, 605, 1022, 1275, 1421, 1750, 2176, 2496 |
| AsuC2I | CCSGG | 2 cut(s) | 173, 3661 |
| AsuII | TTCGAA | 1 cut(s) | 1969 |
| AvaI | CYCGRG | 2 cut(s) | 106, 3245 |
| AvaII | GGWCC | 6 cut(s) | 541, 605, 1022, 1421, 1750, 2176 |
| BaeGI | GKGCMC | 3 cut(s) | 560, 1324, 2077 |
| BalI | TGGCCA | 1 cut(s) | 1713 |
| BamHI | GGATCC | 2 cut(s) | 757, 3896 |
| BanII | GRGCYC | 1 cut(s) | 3567 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 857, 889 |
| BauI | CACGAG | 2 cut(s) | 1565, 3603 |
| BbsI | GAAGAC | 3 cut(s) | 743, 932, 2240 |
| Bbv12I | GWGCWC | 3 cut(s) | 36, 3244, 3567 |
| BbvCI | CCTCAGC | 1 cut(s) | 2241 |
| BbvI | GCAGC | 9 cut(s) | 1209, 1420, 3062, 3220, 3289, 3610, 3755, 3763, 3856 |
| BceAI | ACGGC | 1 cut(s) | 3377 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1355, 1389, 2271, 2305 |
| BciT130I | CCWGG | 8 cut(s) | 86, 465, 545, 667, 1702, 2174, 2745, 3731 |
| BciVI | GTATCC | 3 cut(s) | 1888, 3640, 3671 |
| BclI | TGATCA | 1 cut(s) | 777 |
| BcnI | CCSGG | 2 cut(s) | 173, 3661 |
| BcoDI | GTCTC | 7 cut(s) | 335, 394, 1077, 1237, 1308, 1361, 3067 |
| BfaI | CTAG | 7 cut(s) | 102, 350, 1497, 2948, 3279, 3485, 3582 |
| BfmI | CTRYAG | 6 cut(s) | 492, 609, 1222, 1837, 2082, 2849 |
| BfrI | CTTAAG | 2 cut(s) | 1118, 1730 |
| BfuAI | ACCTGC | 3 cut(s) | 702, 971, 2856 |
| BfuI | GTATCC | 3 cut(s) | 1888, 3640, 3671 |
| BglII | AGATCT | 3 cut(s) | 530, 2896, 3355 |
| BlpI | GCTNAGC | 1 cut(s) | 3164 |
| BmcAI | AGTACT | 2 cut(s) | 2574, 3185 |
| Bme18I | GGWCC | 6 cut(s) | 541, 605, 1022, 1421, 1750, 2176 |
| BmeT110I | CYCGRG | 2 cut(s) | 106, 3245 |
| BmgBI | CACGTC | 1 cut(s) | 336 |
| BmgT120I | GGNCC | 9 cut(s) | 461, 541, 605, 1022, 1275, 1421, 1750, 2176, 2496 |
| BmiI | GGNNCC | 6 cut(s) | 759, 1751, 1918, 2498, 2733, 3898 |
| BmrI | ACTGGG | 1 cut(s) | 3876 |
| BmuI | ACTGGG | 1 cut(s) | 3876 |
| BpiI | GAAGAC | 3 cut(s) | 743, 932, 2240 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3069, 3101 |
| BpmI | CTGGAG | 4 cut(s) | 1065, 1484, 2094, 3752 |
| Bpu10I | CCTNAGC | 3 cut(s) | 30, 2241, 3824 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3164 |
| Bpu14I | TTCGAA | 1 cut(s) | 1969 |
| BpuEI | CTTGAG | 4 cut(s) | 112, 2015, 2963, 3332 |
| BpuMI | CCSGG | 2 cut(s) | 173, 3661 |
| BsaJI | CCNNGG | 7 cut(s) | 463, 464, 1417, 2172, 2670, 3633, 3780 |
| BsaWI | WCCGGW | 1 cut(s) | 3893 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1234, 1264 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 171, 469, 584, 912, 2671, 3265, 3371, 3709 |
| Bse118I | RCCGGY | 1 cut(s) | 3330 |
| Bse1I | ACTGG | 8 cut(s) | 463, 938, 1607, 1899, 1954, 2101, 2142, 3871 |
| Bse3DI | GCAATG | 1 cut(s) | 3425 |
| BseAI | TCCGGA | 1 cut(s) | 3893 |
| BseBI | CCWGG | 8 cut(s) | 86, 465, 545, 667, 1702, 2174, 2745, 3731 |
| BseDI | CCNNGG | 7 cut(s) | 463, 464, 1417, 2172, 2670, 3633, 3780 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 171, 469, 584, 912, 2671, 3265, 3371, 3709 |
| BseMI | GCAATG | 1 cut(s) | 3425 |
| BseNI | ACTGG | 8 cut(s) | 463, 938, 1607, 1899, 1954, 2101, 2142, 3871 |
| BseRI | GAGGAG | 1 cut(s) | 3887 |
| BseSI | GKGCMC | 3 cut(s) | 560, 1324, 2077 |
| BseXI | GCAGC | 9 cut(s) | 1209, 1420, 3062, 3220, 3289, 3610, 3755, 3763, 3856 |
| BseYI | CCCAGC | 2 cut(s) | 1745, 3139 |
| BsgI | GTGCAG | 1 cut(s) | 1419 |
| Bsh1236I | CGCG | 2 cut(s) | 3722, 3804 |
| BshFI | GGCC | 8 cut(s) | 89, 462, 1277, 1713, 1843, 2497, 3364, 3522 |
| BsiHKAI | GWGCWC | 3 cut(s) | 36, 3244, 3567 |
| BsiHKCI | CYCGRG | 2 cut(s) | 106, 3245 |
| BsiSI | CCGG | 4 cut(s) | 172, 3331, 3660, 3894 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 171, 469, 584, 912, 2671, 3265, 3371, 3709 |
| BsmAI | GTCTC | 7 cut(s) | 335, 394, 1077, 1237, 1308, 1361, 3067 |
| BsmI | GAATGC | 1 cut(s) | 1009 |
| BsnI | GGCC | 8 cut(s) | 89, 462, 1277, 1713, 1843, 2497, 3364, 3522 |
| BsoBI | CYCGRG | 2 cut(s) | 106, 3245 |
| Bsp119I | TTCGAA | 1 cut(s) | 1969 |
| Bsp1286I | GDGCHC | 6 cut(s) | 36, 560, 1324, 2077, 3244, 3567 |
| Bsp13I | TCCGGA | 1 cut(s) | 3893 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3164 |
| Bsp19I | CCATGG | 2 cut(s) | 1417, 3780 |
| BspANI | GGCC | 8 cut(s) | 89, 462, 1277, 1713, 1843, 2497, 3364, 3522 |
| BspEI | TCCGGA | 1 cut(s) | 3893 |
| BspFNI | CGCG | 2 cut(s) | 3722, 3804 |
| BspHI | TCATGA | 2 cut(s) | 238, 2260 |
| BspLI | GGNNCC | 6 cut(s) | 759, 1751, 1918, 2498, 2733, 3898 |
| BspMAI | CTGCAG | 2 cut(s) | 1841, 2853 |
| BspMI | ACCTGC | 3 cut(s) | 702, 971, 2856 |
| BspQI | GCTCTTC | 2 cut(s) | 3006, 3413 |
| BspT104I | TTCGAA | 1 cut(s) | 1969 |
| BspTI | CTTAAG | 2 cut(s) | 1118, 1730 |
| BsrDI | GCAATG | 1 cut(s) | 3425 |
| BsrFI | RCCGGY | 1 cut(s) | 3330 |
| BsrI | ACTGG | 8 cut(s) | 463, 938, 1607, 1899, 1954, 2101, 2142, 3871 |
| BssAI | RCCGGY | 1 cut(s) | 3330 |
| BssECI | CCNNGG | 7 cut(s) | 463, 464, 1417, 2172, 2670, 3633, 3780 |
| BssNAI | GTATAC | 1 cut(s) | 2530 |
| BssSI | CACGAG | 2 cut(s) | 1565, 3603 |
| BssT1I | CCWWGG | 4 cut(s) | 1417, 2670, 3633, 3780 |
| Bst1107I | GTATAC | 1 cut(s) | 2530 |
| Bst2BI | CACGAG | 2 cut(s) | 1565, 3603 |
| Bst2UI | CCWGG | 8 cut(s) | 86, 465, 545, 667, 1702, 2174, 2745, 3731 |
| Bst4CI | ACNGT | 6 cut(s) | 794, 931, 1067, 1592, 3061, 3508 |
| Bst6I | CTCTTC | 5 cut(s) | 1684, 2158, 2521, 3006, 3413 |
| BstAFI | CTTAAG | 2 cut(s) | 1118, 1730 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 40, 3302 |
| BstBI | TTCGAA | 1 cut(s) | 1969 |
| BstC8I | GCNNGC | 8 cut(s) | 142, 636, 860, 1114, 1841, 2967, 3207, 3285 |
| BstDSI | CCRYGG | 2 cut(s) | 1417, 3780 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3369 |
| BstFNI | CGCG | 2 cut(s) | 3722, 3804 |
| BstHHI | GCGC | 1 cut(s) | 2889 |
| BstMAI | GTCTC | 7 cut(s) | 335, 394, 1077, 1237, 1308, 1361, 3067 |
| BstNI | CCWGG | 8 cut(s) | 86, 465, 545, 667, 1702, 2174, 2745, 3731 |
| BstNSI | RCATGY | 4 cut(s) | 638, 1651, 1743, 3287 |
| BstSFI | CTRYAG | 6 cut(s) | 492, 609, 1222, 1837, 2082, 2849 |
| BstSLI | GKGCMC | 3 cut(s) | 560, 1324, 2077 |
| BstUI | CGCG | 2 cut(s) | 3722, 3804 |
| BstV1I | GCAGC | 9 cut(s) | 1209, 1420, 3062, 3220, 3289, 3610, 3755, 3763, 3856 |
| BstV2I | GAAGAC | 3 cut(s) | 743, 932, 2240 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2173 |
| BstZ17I | GTATAC | 1 cut(s) | 2530 |
| BsuI | GTATCC | 3 cut(s) | 1888, 3640, 3671 |
| BsuRI | GGCC | 8 cut(s) | 89, 462, 1277, 1713, 1843, 2497, 3364, 3522 |
| BtgI | CCRYGG | 2 cut(s) | 1417, 3780 |
| BtgZI | GCGATG | 1 cut(s) | 495 |
| BtrI | CACGTC | 1 cut(s) | 336 |
| BtsI | GCAGTG | 3 cut(s) | 2075, 2239, 3268 |
| BtsIMutI | CAGTG | 9 cut(s) | 456, 896, 1436, 1614, 1942, 2075, 2239, 2277, 3268 |
| BveI | ACCTGC | 3 cut(s) | 702, 971, 2856 |
| Cac8I | GCNNGC | 8 cut(s) | 142, 636, 860, 1114, 1841, 2967, 3207, 3285 |
| CaiI | CAGNNNCTG | 5 cut(s) | 67, 1462, 3302, 3422, 3853 |
| CciI | TCATGA | 2 cut(s) | 238, 2260 |
| CfoI | GCGC | 1 cut(s) | 2889 |
| Cfr10I | RCCGGY | 1 cut(s) | 3330 |
| Cfr13I | GGNCC | 9 cut(s) | 461, 541, 605, 1022, 1275, 1421, 1750, 2176, 2496 |
| Csp6I | GTAC | 9 cut(s) | 331, 568, 1928, 1974, 2338, 2573, 2716, 3184, 3387 |
| CviQI | GTAC | 9 cut(s) | 331, 568, 1928, 1974, 2338, 2573, 2716, 3184, 3387 |
| DraI | TTTAAA | 2 cut(s) | 1515, 3651 |
| DraIII | CACNNNGTG | 1 cut(s) | 3508 |
| EaeI | YGGCCR | 1 cut(s) | 1711 |
| Eam1104I | CTCTTC | 5 cut(s) | 1684, 2158, 2521, 3006, 3413 |
| EarI | CTCTTC | 5 cut(s) | 1684, 2158, 2521, 3006, 3413 |
| Ecl136II | GAGCTC | 1 cut(s) | 3565 |
| Eco130I | CCWWGG | 4 cut(s) | 1417, 2670, 3633, 3780 |
| Eco147I | AGGCCT | 1 cut(s) | 1843 |
| Eco24I | GRGCYC | 1 cut(s) | 3567 |
| Eco32I | GATATC | 1 cut(s) | 1480 |
| Eco47I | GGWCC | 6 cut(s) | 541, 605, 1022, 1421, 1750, 2176 |
| Eco53kI | GAGCTC | 1 cut(s) | 3565 |
| Eco57I | CTGAAG | 5 cut(s) | 251, 884, 1677, 2816, 3537 |
| Eco88I | CYCGRG | 2 cut(s) | 106, 3245 |
| EcoICRI | GAGCTC | 1 cut(s) | 3565 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3369 |
| EcoRI | GAATTC | 1 cut(s) | 1295 |
| EcoRII | CCWGG | 8 cut(s) | 84, 463, 543, 665, 1700, 2172, 2743, 3729 |
| EcoRV | GATATC | 1 cut(s) | 1480 |
| EcoT14I | CCWWGG | 4 cut(s) | 1417, 2670, 3633, 3780 |
| EcoT22I | ATGCAT | 2 cut(s) | 640, 1874 |
| EcoT38I | GRGCYC | 1 cut(s) | 3567 |
| ErhI | CCWWGG | 4 cut(s) | 1417, 2670, 3633, 3780 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 3392, 3424, 3395, 3427 |
| FauI | CCCGC | 2 cut(s) | 114, 3635 |
| FbaI | TGATCA | 1 cut(s) | 777 |
| FblI | GTMKAC | 1 cut(s) | 2529 |
| FriOI | GRGCYC | 1 cut(s) | 3567 |
| FspBI | CTAG | 7 cut(s) | 102, 350, 1497, 2948, 3279, 3485, 3582 |
| FspI | TGCGCA | 1 cut(s) | 2888 |
| GlaI | GCGC | 1 cut(s) | 2888 |
| GsaI | CCCAGC | 2 cut(s) | 1749, 3143 |
| GsuI | CTGGAG | 4 cut(s) | 1065, 1484, 2094, 3752 |
| HaeIII | GGCC | 8 cut(s) | 89, 462, 1277, 1713, 1843, 2497, 3364, 3522 |
| HapII | CCGG | 4 cut(s) | 172, 3331, 3660, 3894 |
| HhaI | GCGC | 1 cut(s) | 2889 |
| Hin6I | GCGC | 1 cut(s) | 2887 |
| HinP1I | GCGC | 1 cut(s) | 2887 |
| HincII | GTYRAC | 1 cut(s) | 3481 |
| HindII | GTYRAC | 1 cut(s) | 3481 |
| HindIII | AAGCTT | 3 cut(s) | 233, 410, 2967 |
| HpaII | CCGG | 4 cut(s) | 172, 3331, 3660, 3894 |
| Hpy166II | GTNNAC | 7 cut(s) | 333, 605, 943, 1428, 2530, 3481, 3574 |
| Hpy8I | GTNNAC | 7 cut(s) | 333, 605, 943, 1428, 2530, 3481, 3574 |
| HpyAV | CCTTC | 8 cut(s) | 383, 859, 1790, 1799, 1858, 2028, 2840, 3512 |
| HpyCH4III | ACNGT | 6 cut(s) | 794, 931, 1067, 1592, 3061, 3508 |
| HpyCH4IV | ACGT | 3 cut(s) | 335, 1708, 2005 |
| HpySE526I | ACGT | 3 cut(s) | 335, 1708, 2005 |
| HspAI | GCGC | 1 cut(s) | 2887 |
| Kpn2I | TCCGGA | 1 cut(s) | 3893 |
| Ksp22I | TGATCA | 1 cut(s) | 777 |
| LguI | GCTCTTC | 2 cut(s) | 3006, 3413 |
| LmnI | GCTCC | 4 cut(s) | 76, 1736, 1922, 3570 |
| Lsp1109I | GCAGC | 9 cut(s) | 1209, 1420, 3062, 3220, 3289, 3610, 3755, 3763, 3856 |
| MaeI | CTAG | 7 cut(s) | 102, 350, 1497, 2948, 3279, 3485, 3582 |
| MaeII | ACGT | 3 cut(s) | 335, 1708, 2005 |
| MaeIII | GTNAC | 7 cut(s) | 298, 931, 1808, 2682, 2739, 3374, 3508 |
| MfeI | CAATTG | 4 cut(s) | 17, 2025, 2118, 2909 |
| MhlI | GDGCHC | 6 cut(s) | 36, 560, 1324, 2077, 3244, 3567 |
| MlsI | TGGCCA | 1 cut(s) | 1713 |
| MluNI | TGGCCA | 1 cut(s) | 1713 |
| MlyI | GAGTC | 7 cut(s) | 1805, 2144, 2402, 2507, 2552, 2614, 2734 |
| MmeI | TCCRAC | 2 cut(s) | 1412, 2040 |
| Mox20I | TGGCCA | 1 cut(s) | 1713 |
| Mph1103I | ATGCAT | 2 cut(s) | 640, 1874 |
| MroI | TCCGGA | 1 cut(s) | 3893 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3407 |
| MscI | TGGCCA | 1 cut(s) | 1713 |
| MslI | CAYNNNNRTG | 5 cut(s) | 62, 217, 2270, 2388, 3261 |
| Msp20I | TGGCCA | 1 cut(s) | 1713 |
| MspA1I | CMGCKG | 2 cut(s) | 1433, 3233 |
| MspCI | CTTAAG | 2 cut(s) | 1118, 1730 |
| MspI | CCGG | 4 cut(s) | 172, 3331, 3660, 3894 |
| MunI | CAATTG | 4 cut(s) | 17, 2025, 2118, 2909 |
| Mva1269I | GAATGC | 1 cut(s) | 1009 |
| MvaI | CCWGG | 8 cut(s) | 86, 465, 545, 667, 1702, 2174, 2745, 3731 |
| MvnI | CGCG | 2 cut(s) | 3722, 3804 |
| NciI | CCSGG | 2 cut(s) | 173, 3661 |
| NcoI | CCATGG | 2 cut(s) | 1417, 3780 |
| NlaIV | GGNNCC | 6 cut(s) | 759, 1751, 1918, 2498, 2733, 3898 |
| NmuCI | GTSAC | 4 cut(s) | 1808, 2739, 3374, 3508 |
| NsbI | TGCGCA | 1 cut(s) | 2888 |
| NsiI | ATGCAT | 2 cut(s) | 640, 1874 |
| NspI | RCATGY | 4 cut(s) | 638, 1651, 1743, 3287 |
| NspV | TTCGAA | 1 cut(s) | 1969 |
| OliI | CACNNNNGTG | 2 cut(s) | 217, 3261 |
| PaeI | GCATGC | 2 cut(s) | 638, 3287 |
| PaeR7I | CTCGAG | 2 cut(s) | 106, 3245 |
| PagI | TCATGA | 2 cut(s) | 238, 2260 |
| PaqCI | CACCTGC | 1 cut(s) | 971 |
| PasI | CCCWGGG | 1 cut(s) | 464 |
| PceI | AGGCCT | 1 cut(s) | 1843 |
| PciI | ACATGT | 1 cut(s) | 1647 |
| PciSI | GCTCTTC | 2 cut(s) | 3006, 3413 |
| PctI | GAATGC | 1 cut(s) | 1009 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3407 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 584 |
| PfoI | TCCNGGA | 2 cut(s) | 665, 3729 |
| PleI | GAGTC | 7 cut(s) | 1805, 2144, 2401, 2507, 2551, 2614, 2733 |
| PpsI | GAGTC | 7 cut(s) | 1805, 2144, 2401, 2507, 2551, 2614, 2733 |
| PscI | ACATGT | 1 cut(s) | 1647 |
| PshBI | ATTAAT | 1 cut(s) | 641 |
| PsiI | TTATAA | 2 cut(s) | 416, 819 |
| Psp124BI | GAGCTC | 1 cut(s) | 3567 |
| Psp6I | CCWGG | 8 cut(s) | 84, 463, 543, 665, 1700, 2172, 2743, 3729 |
| PspFI | CCCAGC | 2 cut(s) | 1745, 3139 |
| PspGI | CCWGG | 8 cut(s) | 84, 463, 543, 665, 1700, 2172, 2743, 3729 |
| PspN4I | GGNNCC | 6 cut(s) | 759, 1751, 1918, 2498, 2733, 3898 |
| PspPI | GGNCC | 9 cut(s) | 461, 541, 605, 1022, 1275, 1421, 1750, 2176, 2496 |
| PspXI | VCTCGAGB | 1 cut(s) | 106 |
| PstI | CTGCAG | 2 cut(s) | 1841, 2853 |
| PstNI | CAGNNNCTG | 5 cut(s) | 67, 1462, 3302, 3422, 3853 |
| PvuII | CAGCTG | 1 cut(s) | 3233 |
| RsaI | GTAC | 9 cut(s) | 332, 569, 1929, 1975, 2339, 2574, 2717, 3185, 3388 |
| RsaNI | GTAC | 9 cut(s) | 331, 568, 1928, 1974, 2338, 2573, 2716, 3184, 3387 |
| RseI | CAYNNNNRTG | 5 cut(s) | 62, 217, 2270, 2388, 3261 |
| SacI | GAGCTC | 1 cut(s) | 3567 |
| SapI | GCTCTTC | 2 cut(s) | 3006, 3413 |
| Sau96I | GGNCC | 9 cut(s) | 461, 541, 605, 1022, 1275, 1421, 1750, 2176, 2496 |
| ScaI | AGTACT | 2 cut(s) | 2574, 3185 |
| SchI | GAGTC | 7 cut(s) | 1805, 2144, 2402, 2507, 2552, 2614, 2734 |
| SduI | GDGCHC | 6 cut(s) | 36, 560, 1324, 2077, 3244, 3567 |
| SfcI | CTRYAG | 6 cut(s) | 492, 609, 1222, 1837, 2082, 2849 |
| Sfr274I | CTCGAG | 2 cut(s) | 106, 3245 |
| SfuI | TTCGAA | 1 cut(s) | 1969 |
| SinI | GGWCC | 6 cut(s) | 541, 605, 1022, 1421, 1750, 2176 |
| SlaI | CTCGAG | 2 cut(s) | 106, 3245 |
| SmiI | ATTTAAAT | 1 cut(s) | 1515 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 62, 217, 2270, 2388, 3261 |
| SmlI | CTYRAG | 8 cut(s) | 91, 106, 1118, 1730, 1994, 2942, 3245, 3311 |
| SmoI | CTYRAG | 8 cut(s) | 91, 106, 1118, 1730, 1994, 2942, 3245, 3311 |
| SphI | GCATGC | 2 cut(s) | 638, 3287 |
| SseBI | AGGCCT | 1 cut(s) | 1843 |
| SspI | AATATT | 2 cut(s) | 1159, 1784 |
| SspMI | CTAG | 7 cut(s) | 102, 350, 1497, 2948, 3279, 3485, 3582 |
| SstI | GAGCTC | 1 cut(s) | 3567 |
| StuI | AGGCCT | 1 cut(s) | 1843 |
| StyI | CCWWGG | 4 cut(s) | 1417, 2670, 3633, 3780 |
| SwaI | ATTTAAAT | 1 cut(s) | 1515 |
| TaaI | ACNGT | 6 cut(s) | 794, 931, 1067, 1592, 3061, 3508 |
| TaiI | ACGT | 3 cut(s) | 338, 1711, 2008 |
| TatI | WGTACW | 4 cut(s) | 330, 2572, 2715, 3183 |
| TauI | GCSGC | 1 cut(s) | 3535 |
| TscAI | CASTG | 9 cut(s) | 463, 896, 1443, 1614, 1942, 2082, 2239, 2277, 3268 |
| TseFI | GTSAC | 4 cut(s) | 1808, 2739, 3374, 3508 |
| TseI | GCWGC | 9 cut(s) | 1197, 1433, 3050, 3233, 3302, 3623, 3743, 3776, 3844 |
| Tsp45I | GTSAC | 4 cut(s) | 1808, 2739, 3374, 3508 |
| TspGWI | ACGGA | 5 cut(s) | 555, 1413, 2266, 2724, 3889 |
| TspRI | CASTG | 9 cut(s) | 463, 896, 1443, 1614, 1942, 2082, 2239, 2277, 3268 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 584 |
| Vha464I | CTTAAG | 2 cut(s) | 1118, 1730 |
| VpaK11BI | GGWCC | 6 cut(s) | 541, 605, 1022, 1421, 1750, 2176 |
| VspI | ATTAAT | 1 cut(s) | 641 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3369 |
| XbaI | TCTAGA | 1 cut(s) | 1496 |
| XceI | RCATGY | 4 cut(s) | 638, 1651, 1743, 3287 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1269 |
| XhoI | CTCGAG | 2 cut(s) | 106, 3245 |
| XmiI | GTMKAC | 1 cut(s) | 2529 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3407 |
| XspI | CTAG | 7 cut(s) | 102, 350, 1497, 2948, 3279, 3485, 3582 |
| ZrmI | AGTACT | 2 cut(s) | 2574, 3185 |
| Zsp2I | ATGCAT | 2 cut(s) | 640, 1874 |