gamma-irradiation and mitomycin c induced
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HATPase_c_3 | PF13589 | 124 - 244 | 2e-09 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1521 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 623, 2089 |
| AccBSI | CCGCTC | 1 cut(s) | 157 |
| AccI | GTMKAC | 1 cut(s) | 371 |
| AccII | CGCG | 1 cut(s) | 2175 |
| AciI | CCGC | 8 cut(s) | 64, 157, 292, 362, 815, 1221, 1276, 2175 |
| AclWI | GGATC | 5 cut(s) | 19, 333, 779, 792, 1326 |
| AcoI | YGGCCR | 2 cut(s) | 1273, 2301 |
| AcuI | CTGAAG | 5 cut(s) | 810, 911, 1046, 1163, 1707 |
| AcyI | GRCGYC | 2 cut(s) | 1977, 2372 |
| AfaI | GTAC | 2 cut(s) | 1959, 2179 |
| AfeI | AGCGCT | 1 cut(s) | 301 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 623, 2089, 2427 |
| AflII | CTTAAG | 1 cut(s) | 1760 |
| AflIII | ACRYGT | 1 cut(s) | 318 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1248 |
| AjnI | CCWGG | 2 cut(s) | 502, 1730 |
| AleI | CACNNNNGTG | 1 cut(s) | 259 |
| AluBI | AGCT | 6 cut(s) | 825, 889, 1060, 1130, 1616, 1994 |
| AluI | AGCT | 6 cut(s) | 825, 889, 1060, 1130, 1616, 1994 |
| Alw26I | GTCTC | 5 cut(s) | 1235, 1385, 1835, 2023, 2360 |
| AlwI | GGATC | 5 cut(s) | 19, 333, 779, 792, 1326 |
| Ama87I | CYCGRG | 1 cut(s) | 2220 |
| Aor51HI | AGCGCT | 1 cut(s) | 301 |
| AoxI | GGCC | 4 cut(s) | 1273, 1871, 2301, 2517 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2239 |
| AspLEI | GCGC | 2 cut(s) | 302, 2363 |
| AspS9I | GGNCC | 7 cut(s) | 500, 644, 1040, 1224, 1699, 1728, 2131 |
| AsuHPI | GGTGA | 3 cut(s) | 1637, 1850, 1862 |
| AsuII | TTCGAA | 1 cut(s) | 2233 |
| AvaI | CYCGRG | 1 cut(s) | 2220 |
| AvaII | GGWCC | 7 cut(s) | 500, 644, 1040, 1224, 1699, 1728, 2131 |
| AxyI | CCTNAGG | 1 cut(s) | 72 |
| BalI | TGGCCA | 1 cut(s) | 2303 |
| BamHI | GGATCC | 1 cut(s) | 784 |
| BbsI | GAAGAC | 3 cut(s) | 770, 950, 1430 |
| BccI | CCATC | 6 cut(s) | 278, 502, 506, 1290, 1391, 2093 |
| BceAI | ACGGC | 4 cut(s) | 55, 2051, 2139, 2385 |
| BciT130I | CCWGG | 2 cut(s) | 504, 1732 |
| BcoDI | GTCTC | 5 cut(s) | 1235, 1385, 1835, 2023, 2360 |
| BfaI | CTAG | 1 cut(s) | 1433 |
| BfmI | CTRYAG | 2 cut(s) | 531, 648 |
| BfoI | RGCGCY | 2 cut(s) | 303, 2364 |
| BfrI | CTTAAG | 1 cut(s) | 1760 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2369 |
| BisI | GCNGC | 1 cut(s) | 1276 |
| BlsI | GCNGC | 1 cut(s) | 1277 |
| Bme1390I | CCNGG | 2 cut(s) | 504, 1732 |
| Bme18I | GGWCC | 7 cut(s) | 500, 644, 1040, 1224, 1699, 1728, 2131 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1248 |
| BmeT110I | CYCGRG | 1 cut(s) | 2220 |
| BmgT120I | GGNCC | 7 cut(s) | 500, 644, 1040, 1224, 1699, 1728, 2131 |
| BmiI | GGNNCC | 4 cut(s) | 786, 1225, 1700, 2132 |
| BmrFI | CCNGG | 2 cut(s) | 504, 1732 |
| BmsI | GCATC | 7 cut(s) | 193, 727, 1279, 1575, 1911, 2059, 2269 |
| BoxI | GACNNNNGTC | 1 cut(s) | 498 |
| BpiI | GAAGAC | 3 cut(s) | 770, 950, 1430 |
| BpmI | CTGGAG | 2 cut(s) | 173, 863 |
| Bpu14I | TTCGAA | 1 cut(s) | 2233 |
| BpuEI | CTTGAG | 2 cut(s) | 1307, 1508 |
| BsaHI | GRCGYC | 2 cut(s) | 1977, 2372 |
| BsaI | GGTCTC | 2 cut(s) | 1235, 1835 |
| BsaJI | CCNNGG | 2 cut(s) | 503, 1834 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 623, 2089, 2427 |
| Bse1I | ACTGG | 8 cut(s) | 156, 179, 502, 772, 867, 880, 956, 1227 |
| Bse21I | CCTNAGG | 1 cut(s) | 72 |
| Bse3DI | GCAATG | 2 cut(s) | 86, 1042 |
| BseBI | CCWGG | 2 cut(s) | 504, 1732 |
| BseDI | CCNNGG | 2 cut(s) | 503, 1834 |
| BseGI | GGATG | 6 cut(s) | 123, 469, 513, 517, 1902, 2284 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 623, 2089, 2427 |
| BseMI | GCAATG | 2 cut(s) | 86, 1042 |
| BseMII | CTCAG | 5 cut(s) | 63, 760, 981, 1203, 1998 |
| BseNI | ACTGG | 8 cut(s) | 156, 179, 502, 772, 867, 880, 956, 1227 |
| BseRI | GAGGAG | 1 cut(s) | 1350 |
| BseYI | CCCAGC | 2 cut(s) | 1775, 2126 |
| Bsh1236I | CGCG | 1 cut(s) | 2175 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2432 |
| BshFI | GGCC | 4 cut(s) | 1275, 1873, 2303, 2519 |
| BsiEI | CGRYCG | 1 cut(s) | 2432 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2220 |
| BsiSI | CCGG | 1 cut(s) | 1980 |
| BslFI | GGGAC | 1 cut(s) | 1237 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 623, 2089, 2427 |
| BsmAI | GTCTC | 5 cut(s) | 1235, 1385, 1835, 2023, 2360 |
| BsmBI | CGTCTC | 2 cut(s) | 2023, 2360 |
| BsmFI | GGGAC | 1 cut(s) | 1237 |
| BsmI | GAATGC | 1 cut(s) | 1027 |
| BsnI | GGCC | 4 cut(s) | 1275, 1873, 2303, 2519 |
| Bso31I | GGTCTC | 2 cut(s) | 1235, 1835 |
| BsoBI | CYCGRG | 1 cut(s) | 2220 |
| Bsp119I | TTCGAA | 1 cut(s) | 2233 |
| Bsp143I | GATC | 6 cut(s) | 24, 325, 480, 784, 1318, 1429 |
| BspACI | CCGC | 8 cut(s) | 64, 157, 292, 362, 815, 1221, 1276, 2175 |
| BspANI | GGCC | 4 cut(s) | 1275, 1873, 2303, 2519 |
| BspCNI | CTCAG | 5 cut(s) | 64, 759, 982, 1204, 1999 |
| BspFNI | CGCG | 1 cut(s) | 2175 |
| BspHI | TCATGA | 1 cut(s) | 240 |
| BspLI | GGNNCC | 4 cut(s) | 786, 1225, 1700, 2132 |
| BspPI | GGATC | 5 cut(s) | 19, 333, 779, 792, 1326 |
| BspT104I | TTCGAA | 1 cut(s) | 2233 |
| BspTI | CTTAAG | 1 cut(s) | 1760 |
| BspTNI | GGTCTC | 2 cut(s) | 1235, 1835 |
| BsrBI | CCGCTC | 1 cut(s) | 157 |
| BsrDI | GCAATG | 2 cut(s) | 86, 1042 |
| BsrI | ACTGG | 8 cut(s) | 156, 179, 502, 772, 867, 880, 956, 1227 |
| BssECI | CCNNGG | 2 cut(s) | 503, 1834 |
| BssMI | GATC | 6 cut(s) | 24, 325, 480, 784, 1318, 1429 |
| BssNAI | GTATAC | 1 cut(s) | 372 |
| BssNI | GRCGYC | 2 cut(s) | 1977, 2372 |
| BssT1I | CCWWGG | 1 cut(s) | 1834 |
| Bst1107I | GTATAC | 1 cut(s) | 372 |
| Bst2UI | CCWGG | 2 cut(s) | 504, 1732 |
| Bst4CI | ACNGT | 3 cut(s) | 1445, 1622, 2182 |
| Bst6I | CTCTTC | 2 cut(s) | 108, 2527 |
| BstACI | GRCGYC | 2 cut(s) | 1977, 2372 |
| BstAFI | CTTAAG | 1 cut(s) | 1760 |
| BstBI | TTCGAA | 1 cut(s) | 2233 |
| BstC8I | GCNNGC | 6 cut(s) | 417, 675, 887, 1138, 1280, 1871 |
| BstDEI | CTNAG | 8 cut(s) | 72, 272, 690, 746, 831, 990, 1212, 2007 |
| BstF5I | GGATG | 6 cut(s) | 123, 469, 513, 517, 1902, 2284 |
| BstFNI | CGCG | 1 cut(s) | 2175 |
| BstH2I | RGCGCY | 2 cut(s) | 303, 2364 |
| BstHHI | GCGC | 2 cut(s) | 302, 2363 |
| BstKTI | GATC | 6 cut(s) | 27, 328, 483, 787, 1321, 1432 |
| BstMAI | GTCTC | 5 cut(s) | 1235, 1385, 1835, 2023, 2360 |
| BstMBI | GATC | 6 cut(s) | 24, 325, 480, 784, 1318, 1429 |
| BstMCI | CGRYCG | 1 cut(s) | 2432 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1146, 2369 |
| BstNI | CCWGG | 2 cut(s) | 504, 1732 |
| BstNSI | RCATGY | 2 cut(s) | 322, 1773 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 498 |
| BstSCI | CCNGG | 2 cut(s) | 502, 1730 |
| BstSFI | CTRYAG | 2 cut(s) | 531, 648 |
| BstUI | CGCG | 1 cut(s) | 2175 |
| BstV2I | GAAGAC | 3 cut(s) | 770, 950, 1430 |
| BstX2I | RGATCY | 4 cut(s) | 24, 325, 784, 1318 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 664 |
| BstYI | RGATCY | 4 cut(s) | 24, 325, 784, 1318 |
| BstZ17I | GTATAC | 1 cut(s) | 372 |
| Bsu36I | CCTNAGG | 1 cut(s) | 72 |
| BsuRI | GGCC | 4 cut(s) | 1275, 1873, 2303, 2519 |
| BtgZI | GCGATG | 1 cut(s) | 1491 |
| BtsCI | GGATG | 6 cut(s) | 123, 469, 513, 517, 1902, 2284 |
| BtsIMutI | CAGTG | 6 cut(s) | 149, 495, 754, 887, 1234, 1972 |
| Cac8I | GCNNGC | 6 cut(s) | 417, 675, 887, 1138, 1280, 1871 |
| CciI | TCATGA | 1 cut(s) | 240 |
| CfoI | GCGC | 2 cut(s) | 302, 2363 |
| Cfr13I | GGNCC | 7 cut(s) | 500, 644, 1040, 1224, 1699, 1728, 2131 |
| CseI | GACGC | 2 cut(s) | 1985, 2361 |
| Csp6I | GTAC | 2 cut(s) | 1958, 2178 |
| CviAII | CATG | 9 cut(s) | 164, 241, 319, 365, 658, 778, 1315, 1369, 1770 |
| CviQI | GTAC | 2 cut(s) | 1958, 2178 |
| DdeI | CTNAG | 8 cut(s) | 72, 272, 690, 746, 831, 990, 1212, 2007 |
| DpnI | GATC | 6 cut(s) | 26, 327, 482, 786, 1320, 1431 |
| DpnII | GATC | 6 cut(s) | 24, 325, 480, 784, 1318, 1429 |
| DraI | TTTAAA | 1 cut(s) | 1113 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1248 |
| EaeI | YGGCCR | 2 cut(s) | 1273, 2301 |
| Eam1104I | CTCTTC | 2 cut(s) | 108, 2527 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1248 |
| EarI | CTCTTC | 2 cut(s) | 108, 2527 |
| Eco130I | CCWWGG | 1 cut(s) | 1834 |
| Eco147I | AGGCCT | 1 cut(s) | 1873 |
| Eco31I | GGTCTC | 2 cut(s) | 1235, 1835 |
| Eco47I | GGWCC | 7 cut(s) | 500, 644, 1040, 1224, 1699, 1728, 2131 |
| Eco47III | AGCGCT | 1 cut(s) | 301 |
| Eco57I | CTGAAG | 5 cut(s) | 810, 911, 1046, 1163, 1707 |
| Eco81I | CCTNAGG | 1 cut(s) | 72 |
| Eco88I | CYCGRG | 1 cut(s) | 2220 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1728, 2131 |
| EcoRI | GAATTC | 1 cut(s) | 2435 |
| EcoRII | CCWGG | 2 cut(s) | 502, 1730 |
| EcoT14I | CCWWGG | 1 cut(s) | 1834 |
| EcoT22I | ATGCAT | 1 cut(s) | 1590 |
| ErhI | CCWWGG | 1 cut(s) | 1834 |
| Esp3I | CGTCTC | 2 cut(s) | 2023, 2360 |
| FaeI | CATG | 9 cut(s) | 167, 244, 322, 368, 661, 781, 1318, 1372, 1773 |
| FaqI | GGGAC | 1 cut(s) | 1237 |
| FatI | CATG | 9 cut(s) | 163, 240, 318, 364, 657, 777, 1314, 1368, 1769 |
| FauI | CCCGC | 2 cut(s) | 285, 1214 |
| FauNDI | CATATG | 2 cut(s) | 422, 1120 |
| FblI | GTMKAC | 1 cut(s) | 371 |
| Fnu4HI | GCNGC | 1 cut(s) | 1276 |
| FokI | GGATG | 6 cut(s) | 110, 476, 520, 524, 1889, 2291 |
| Fsp4HI | GCNGC | 1 cut(s) | 1276 |
| FspBI | CTAG | 1 cut(s) | 1433 |
| GlaI | GCGC | 2 cut(s) | 301, 2362 |
| GluI | GCNGC | 1 cut(s) | 1276 |
| GsaI | CCCAGC | 2 cut(s) | 1779, 2130 |
| GsuI | CTGGAG | 2 cut(s) | 173, 863 |
| HaeII | RGCGCY | 2 cut(s) | 303, 2364 |
| HaeIII | GGCC | 4 cut(s) | 1275, 1873, 2303, 2519 |
| HapII | CCGG | 1 cut(s) | 1980 |
| HgaI | GACGC | 2 cut(s) | 1985, 2361 |
| HhaI | GCGC | 2 cut(s) | 302, 2363 |
| Hin1I | GRCGYC | 2 cut(s) | 1977, 2372 |
| Hin1II | CATG | 9 cut(s) | 167, 244, 322, 368, 661, 781, 1318, 1372, 1773 |
| Hin6I | GCGC | 2 cut(s) | 300, 2361 |
| HinP1I | GCGC | 2 cut(s) | 300, 2361 |
| HincII | GTYRAC | 2 cut(s) | 469, 1975 |
| HindII | GTYRAC | 2 cut(s) | 469, 1975 |
| HindIII | AAGCTT | 1 cut(s) | 823 |
| HinfI | GANTC | 9 cut(s) | 67, 701, 724, 994, 1208, 1841, 1946, 2168, 2216 |
| HpaII | CCGG | 1 cut(s) | 1980 |
| HphI | GGTGA | 3 cut(s) | 1637, 1850, 1862 |
| Hpy166II | GTNNAC | 5 cut(s) | 372, 469, 599, 644, 1975 |
| Hpy8I | GTNNAC | 5 cut(s) | 372, 469, 599, 644, 1975 |
| Hpy99I | CGWCG | 1 cut(s) | 2037 |
| HpyCH4III | ACNGT | 3 cut(s) | 1445, 1622, 2182 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1146, 2369 |
| HpyF3I | CTNAG | 8 cut(s) | 72, 272, 690, 746, 831, 990, 1212, 2007 |
| Hsp92I | GRCGYC | 2 cut(s) | 1977, 2372 |
| Hsp92II | CATG | 9 cut(s) | 167, 244, 322, 368, 661, 781, 1318, 1372, 1773 |
| HspAI | GCGC | 2 cut(s) | 300, 2361 |
| Kzo9I | GATC | 6 cut(s) | 24, 325, 480, 784, 1318, 1429 |
| LmnI | GCTCC | 2 cut(s) | 154, 1766 |
| LweI | GCATC | 7 cut(s) | 193, 727, 1279, 1575, 1911, 2059, 2269 |
| MaeI | CTAG | 1 cut(s) | 1433 |
| MaeIII | GTNAC | 3 cut(s) | 263, 773, 1711 |
| MalI | GATC | 6 cut(s) | 26, 327, 482, 786, 1320, 1431 |
| MbiI | CCGCTC | 1 cut(s) | 157 |
| MboI | GATC | 6 cut(s) | 24, 325, 480, 784, 1318, 1429 |
| MfeI | CAATTG | 3 cut(s) | 1349, 1806, 2055 |
| MflI | RGATCY | 4 cut(s) | 24, 325, 784, 1318 |
| MlsI | TGGCCA | 1 cut(s) | 2303 |
| MluNI | TGGCCA | 1 cut(s) | 2303 |
| MlyI | GAGTC | 2 cut(s) | 1217, 2162 |
| MmeI | TCCRAC | 3 cut(s) | 1436, 2070, 2412 |
| Mox20I | TGGCCA | 1 cut(s) | 2303 |
| Mph1103I | ATGCAT | 1 cut(s) | 1590 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2239 |
| MscI | TGGCCA | 1 cut(s) | 2303 |
| MslI | CAYNNNNRTG | 1 cut(s) | 259 |
| Msp20I | TGGCCA | 1 cut(s) | 2303 |
| MspCI | CTTAAG | 1 cut(s) | 1760 |
| MspI | CCGG | 1 cut(s) | 1980 |
| MspR9I | CCNGG | 2 cut(s) | 504, 1732 |
| MunI | CAATTG | 3 cut(s) | 1349, 1806, 2055 |
| Mva1269I | GAATGC | 1 cut(s) | 1027 |
| MvaI | CCWGG | 2 cut(s) | 504, 1732 |
| MvnI | CGCG | 1 cut(s) | 2175 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1146, 2369 |
| NdeI | CATATG | 2 cut(s) | 422, 1120 |
| NdeII | GATC | 6 cut(s) | 24, 325, 480, 784, 1318, 1429 |
| NlaIII | CATG | 9 cut(s) | 167, 244, 322, 368, 661, 781, 1318, 1372, 1773 |
| NlaIV | GGNNCC | 4 cut(s) | 786, 1225, 1700, 2132 |
| NmeAIII | GCCGAG | 1 cut(s) | 2389 |
| NmuCI | GTSAC | 1 cut(s) | 263 |
| NsiI | ATGCAT | 1 cut(s) | 1590 |
| NspI | RCATGY | 2 cut(s) | 322, 1773 |
| NspV | TTCGAA | 1 cut(s) | 2233 |
| OliI | CACNNNNGTG | 1 cut(s) | 259 |
| PagI | TCATGA | 1 cut(s) | 240 |
| PceI | AGGCCT | 1 cut(s) | 1873 |
| PciI | ACATGT | 1 cut(s) | 318 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2163 |
| PctI | GAATGC | 1 cut(s) | 1027 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2239 |
| PfeI | GAWTC | 7 cut(s) | 67, 701, 724, 994, 1841, 1946, 2216 |
| PflFI | GACNNNGTC | 1 cut(s) | 2371 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 623, 2089 |
| PkrI | GCNGC | 1 cut(s) | 1277 |
| PleI | GAGTC | 2 cut(s) | 1216, 2162 |
| PpsI | GAGTC | 2 cut(s) | 1216, 2162 |
| PpuMI | RGGWCCY | 2 cut(s) | 1728, 2131 |
| PscI | ACATGT | 1 cut(s) | 318 |
| PshAI | GACNNNNGTC | 1 cut(s) | 498 |
| PsiI | TTATAA | 1 cut(s) | 1521 |
| Psp5II | RGGWCCY | 2 cut(s) | 1728, 2131 |
| Psp6I | CCWGG | 2 cut(s) | 502, 1730 |
| PspFI | CCCAGC | 2 cut(s) | 1775, 2126 |
| PspGI | CCWGG | 2 cut(s) | 502, 1730 |
| PspN4I | GGNNCC | 4 cut(s) | 786, 1225, 1700, 2132 |
| PspPI | GGNCC | 7 cut(s) | 500, 644, 1040, 1224, 1699, 1728, 2131 |
| PspPPI | RGGWCCY | 2 cut(s) | 1728, 2131 |
| PsuI | RGATCY | 4 cut(s) | 24, 325, 784, 1318 |
| PsyI | GACNNNGTC | 1 cut(s) | 2371 |
| RsaI | GTAC | 2 cut(s) | 1959, 2179 |
| RsaNI | GTAC | 2 cut(s) | 1958, 2178 |
| RseI | CAYNNNNRTG | 1 cut(s) | 259 |
| SatI | GCNGC | 1 cut(s) | 1276 |
| Sau3AI | GATC | 6 cut(s) | 24, 325, 480, 784, 1318, 1429 |
| Sau96I | GGNCC | 7 cut(s) | 500, 644, 1040, 1224, 1699, 1728, 2131 |
| SchI | GAGTC | 2 cut(s) | 1217, 2162 |
| ScrFI | CCNGG | 2 cut(s) | 504, 1732 |
| SfaNI | GCATC | 7 cut(s) | 193, 727, 1279, 1575, 1911, 2059, 2269 |
| SfcI | CTRYAG | 2 cut(s) | 531, 648 |
| SfuI | TTCGAA | 1 cut(s) | 2233 |
| SinI | GGWCC | 7 cut(s) | 500, 644, 1040, 1224, 1699, 1728, 2131 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 259 |
| SmlI | CTYRAG | 3 cut(s) | 1322, 1487, 1760 |
| SmoI | CTYRAG | 3 cut(s) | 1322, 1487, 1760 |
| SseBI | AGGCCT | 1 cut(s) | 1873 |
| SsiI | CCGC | 8 cut(s) | 64, 157, 292, 362, 815, 1221, 1276, 2175 |
| SspMI | CTAG | 1 cut(s) | 1433 |
| StuI | AGGCCT | 1 cut(s) | 1873 |
| StyD4I | CCNGG | 2 cut(s) | 502, 1730 |
| StyI | CCWWGG | 1 cut(s) | 1834 |
| TaaI | ACNGT | 3 cut(s) | 1445, 1622, 2182 |
| TaqI | TCGA | 4 cut(s) | 1294, 1421, 2166, 2233 |
| TaqII | GACCGA | 1 cut(s) | 2418 |
| TauI | GCSGC | 1 cut(s) | 1278 |
| TfiI | GAWTC | 7 cut(s) | 67, 701, 724, 994, 1841, 1946, 2216 |
| TscAI | CASTG | 6 cut(s) | 156, 502, 754, 887, 1234, 1972 |
| TseFI | GTSAC | 1 cut(s) | 263 |
| Tsp45I | GTSAC | 1 cut(s) | 263 |
| TspGWI | ACGGA | 3 cut(s) | 41, 834, 2174 |
| TspRI | CASTG | 6 cut(s) | 156, 502, 754, 887, 1234, 1972 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2371 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 623, 2089 |
| Vha464I | CTTAAG | 1 cut(s) | 1760 |
| VpaK11BI | GGWCC | 7 cut(s) | 500, 644, 1040, 1224, 1699, 1728, 2131 |
| XceI | RCATGY | 2 cut(s) | 322, 1773 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1841 |
| XmiI | GTMKAC | 1 cut(s) | 371 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2239 |
| XspI | CTAG | 1 cut(s) | 1433 |
| Zsp2I | ATGCAT | 1 cut(s) | 1590 |