Rw1G039500

gamma-irradiation and mitomycin c induced

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
67062106 .. 67072077
9972 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G039500.1

Sequence Viewer

Length: 2592 bp
ATGCCATTCCGAGATTTCATTAAAAGGGTGGAAGAGGAATACATTCGCACGCCGAAACAATCAGGCTCACACTCACTGGAGCGGAGACAGGAGATTAACTGGAAAGGTGGTAACTTTCTTCTTGTAGATGCTGATGATATGGAGATACAGAATGTAGTGAATTTCATGACCTGCAACCCACAAGAGTGTCACATTCTAAGGCTTCAAGATGGTCTGCGGGAGAGTACTACTACTTTTGAGAACATGTGGAATCTGACACCTGATACTGATATACTAAAGGAACTACCGCATGAGTATACATATTTGAATGCTCTGGCACATTTGATTGATAATTCTCTGCAAGCCGTGTGGTCAAATGAAAGGAGAGATATTAAACATATAAGCGTGGATGTTGACGATGATGTAATCTCAATTTTTGACACTGGCCCTGGGATGGATGGAAGTGATGAAAACTCTATAGTGAAGTGGGGAAAGATGGGTGCTTCAATTCACAGATTTGAAAAGGAACAGGCAATAGGGGGTGCACCTCCGTACTTAAAGCCGTTTTTTGGAATGTTTGGATATGGTGGACCAATAGCCTCCATGCAGTTGGGGAGGCGTGCATTAGTTTCTTCCAAGACAAAGGATTCAAAGAAAGTTTATACCTTGAATCTTGATAGAGATGCTTTACTCAGTGGGTCTGATTGGAAGGCTGGCGCTAACATGAGGGATCCTGAAGAAGATGAGATAAGCAGAACACCGCACGGAAGCTTTACTAAGGTTGAAATCTCTGAGCCTAGATCAAAACTGGACATATATCAACTCCAGTGCCAACTGAAGGATATATATTTCCCATATATTCAGTATGAAGATACAAAATCAGGGAAGACCATATTGCCAGTCAAGTTTGAGGTCAATGGTGTTGATTTGGCTGAGATTCAGGGTGGTGAAATTGCAATTACCAACTTGCATTCCTGCAATGGTCCTGATTTTGTTTTACAGCTTCAGTTCTCCTATAAGCAAGATAATATGAGTAAATATTCAAAGACATATACCAAAGCTAATGCTCGCCTGAAGTGCGTTTATTTCCCTATTGTTAAGAGAAAAGAGAACATTGACAGAATTTTGGAGGGGTTAGAGTCTGAGAAATGTGGGACCACAGAAAATTTTGAGACCTTTAGTCGTGTCTCTATTCGGAGGCTTGGCCGCCTGCTTCCTGATGCTCGTTGGGGTTTGCTTCCTTTCATGGATCTCAAGCAAAAGAGAGGAGACACGGCACGATTGTTGAAAAGATGTTGCATGAGAGTAAAGTGCTTTATAGAGACTGATGCTGGTTTCAATCCAACATCATCAAAGACTGATCTAGCATACCACAGTCTTTTCACAACTGCATTGAGGAATTTCGGCAATAAGCCTCTTGAGAACGAGAATGTTGCAAGGATGTGTAAATTTATAACGAGGAATGGAAGGACCTGGAAGTGTGGTCAAAGAATTAAACTTCTTAAGGGAGCATGTGCTGGGGTTCAAAAGAACAATGTTTATGCCACAATTGAATACTTTTTACTTGAAGGTCTCCAAGATGAATCTGGTGGTGAGGCTCAAATTATATGCAGGCCTTCAAGTCTGTCAGATGAAAAGGGGTGCATTCTTTCAGTCAATGATGAGGATACTAAATCCTTGTCTATACCACTCAGTGTGATTGATGCTGGAAAGTGCATAGGAGTTGAAAGAACTGAGTGGGAAAAACATATAGAGAGACGACGCCAGAGATCTTTTACAGCTGAACTTCTTGATGCAGAACAATGCCAAGAGTTGGAGGTTGATGGGGTTTATGAAAATGGAACTACCTCTGCGGCCATAAAGTATTCTGAAGGTATTGCATGCACATTCGATTCTCGTGGTACCTGCTGCCATACAAACCAGAATGAGTCTATCATGGATACCCGAGATAAGTTTCGTGTGATTTCCAGTAAATCAAATTTATTATATATGGGGGTTGGGGACTCAACTAGCTGGGAGTGGCTAGCCAAGATGGTAGCTGCTGAAGTTAAAAGTTTAGAAGAATCGTCCAAGAATCTGGTGACGGTGGAGAGGGCACTTATCATGGTACAGGAATATCTGGAAGGATATTTGAAAGTGTACCCCAAAAATAAGGGCGTTTTTGGAGGAATTTTAGTAGGATGGCTACCAAACAAGGTTTATCACGCTTATTCGGTTCTTTTGGAGGGGAAAGTGACACACAAGGCTGTAAGTCTTGACACCGAAAACCCCTATTTGGTGCTTGGTTCAAAATCTGCAGAAGTCATCCTAAAGAAGTTGGCTCGTAATCCCAAAATGTGTGGAAATGCTGCTAGGAGAGCTGCTATAAGCACAATGGTTTATGCAACATTTAATGATGTACACACAGGTGGCCCCATACACGTTTTTGTTCTTCGAGATGGAGAAAATATAACCAGAGATGGAGGACATGAGAGTGAAATCCCTCCATTGGATGTGGCTCTCTACCCGAAATTTAGGACAGTTACTATTTCTGTGGGGCACGGAATGTCTGTTAATGTGCTTGTGCAAAAGTGCAACAAAGAAATGTTGGAATTCATGGCAACATATGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

863

Amino Acids

97.37

Weight (kDa)

6.44

Isoelectric Point (pI)

41.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c_3 PF13589 100 - 219 4.9e-08 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1433
Acc36I ACCTGC 2 cut(s) 179, 1892
Acc65I GGTACC 1 cut(s) 1880
AccB1I GGYRCC 1 cut(s) 1880
AccB7I CCANNNNNTGG 1 cut(s) 1792
AccBSI CCGCTC 1 cut(s) 82
AccI GTMKAC 1 cut(s) 296
AciI CCGC 6 cut(s) 82, 217, 287, 740, 1186, 1832
AclWI GGATC 3 cut(s) 704, 717, 1236
AcoI YGGCCR 2 cut(s) 1183, 1833
AcsI RAATTY 9 cut(s) 160, 1101, 1144, 1378, 1427, 1957, 2148, 2489, 2570
AcuI CTGAAG 6 cut(s) 735, 836, 968, 1073, 1869, 2043
AcyI GRCGYC 1 cut(s) 1741
AdeI CACNNNGTG 1 cut(s) 1673
AfaI GTAC 6 cut(s) 226, 533, 1882, 2088, 2120, 2379
AfiI CCNNNNNNNGG 6 cut(s) 433, 548, 817, 1792, 2254, 2467
AflII CTTAAG 1 cut(s) 1481
AflIII ACRYGT 2 cut(s) 243, 2398
AhdI GACNNNNNGTC 1 cut(s) 1158
AjnI CCWGG 2 cut(s) 427, 1451
AleI CACNNNNGTG 2 cut(s) 184, 2385
AluBI AGCT 7 cut(s) 750, 982, 1040, 1760, 1992, 2018, 2339
AluI AGCT 7 cut(s) 750, 982, 1040, 1760, 1992, 2018, 2339
Alw21I GWGCWC 1 cut(s) 526
Alw26I GTCTC 7 cut(s) 79, 1145, 1171, 1242, 1295, 1556, 1729
Alw44I GTGCAC 1 cut(s) 522
AlwI GGATC 3 cut(s) 704, 717, 1236
Ama87I CYCGRG 1 cut(s) 1923
AoxI GGCC 5 cut(s) 424, 1183, 1592, 1833, 2389
ApaLI GTGCAC 1 cut(s) 522
ApeKI GCWGC 4 cut(s) 1887, 2018, 2327, 2339
ApoI RAATTY 9 cut(s) 160, 1101, 1144, 1378, 1427, 1957, 2148, 2489, 2570
Asp700I GAANNNNTTC 1 cut(s) 42
Asp718I GGTACC 1 cut(s) 1880
AspLEI GCGC 1 cut(s) 698
AspS9I GGNCC 6 cut(s) 425, 569, 962, 1134, 1449, 2390
AsuHPI GGTGA 3 cut(s) 938, 1583, 2071
AsuNHI GCTAGC 1 cut(s) 2002
AvaI CYCGRG 1 cut(s) 1923
AvaII GGWCC 4 cut(s) 569, 962, 1134, 1449
BaeGI GKGCMC 3 cut(s) 526, 2077, 2520
BamHI GGATCC 1 cut(s) 709
BanI GGYRCC 1 cut(s) 1880
BauI CACGAG 1 cut(s) 1875
BbsI GAAGAC 1 cut(s) 872
Bbv12I GWGCWC 1 cut(s) 526
BbvI GCAGC 4 cut(s) 1874, 2005, 2314, 2326
BccI CCATC 9 cut(s) 203, 427, 431, 469, 1796, 2005, 2154, 2411, 2432
BceAI ACGGC 3 cut(s) 329, 526, 1269
BcgI CGANNNNNNTGC 2 cut(s) 1394, 1428
BciT130I CCWGG 2 cut(s) 429, 1453
BciVI GTATCC 2 cut(s) 1639, 1912
BcoDI GTCTC 7 cut(s) 79, 1145, 1171, 1242, 1295, 1556, 1729
BfaI CTAG 5 cut(s) 777, 1343, 1989, 2003, 2331
BfmI CTRYAG 2 cut(s) 456, 2274
BfoI RGCGCY 1 cut(s) 699
BfrI CTTAAG 1 cut(s) 1481
BfuAI ACCTGC 2 cut(s) 179, 1892
BfuI GTATCC 2 cut(s) 1639, 1912
BglII AGATCT 1 cut(s) 1748
BisI GCNGC 6 cut(s) 1186, 1833, 1888, 2019, 2328, 2340
BlsI GCNGC 6 cut(s) 1187, 1834, 1889, 2020, 2329, 2341
BmcAI AGTACT 1 cut(s) 226
Bme1390I CCNGG 2 cut(s) 429, 1453
Bme18I GGWCC 4 cut(s) 569, 962, 1134, 1449
BmeRI GACNNNNNGTC 1 cut(s) 1158
BmeT110I CYCGRG 1 cut(s) 1923
BmgT120I GGNCC 6 cut(s) 425, 569, 962, 1134, 1449, 2390
BmiI GGNNCC 4 cut(s) 711, 1135, 1882, 2392
BmrFI CCNGG 2 cut(s) 429, 1453
BmsI GCATC 6 cut(s) 118, 652, 1189, 1297, 1672, 1762
BmtI GCTAGC 1 cut(s) 2006
BpiI GAAGAC 1 cut(s) 872
BpmI CTGGAG 2 cut(s) 98, 788
BpuEI CTTGAG 2 cut(s) 1217, 1418
BsaHI GRCGYC 1 cut(s) 1741
BsaI GGTCTC 2 cut(s) 1145, 1556
BsaJI CCNNGG 2 cut(s) 427, 428
Bsc4I CCNNNNNNNGG 6 cut(s) 433, 548, 817, 1792, 2254, 2467
Bse1I ACTGG 7 cut(s) 81, 104, 427, 792, 805, 878, 1947
Bse3DI GCAATG 1 cut(s) 964
BseBI CCWGG 2 cut(s) 429, 1453
BseDI CCNNGG 2 cut(s) 427, 428
BseGI GGATG 7 cut(s) 394, 438, 442, 1425, 2165, 2283, 2476
BseLI CCNNNNNNNGG 6 cut(s) 433, 548, 817, 1792, 2254, 2467
BseMI GCAATG 1 cut(s) 964
BseMII CTCAG 6 cut(s) 685, 762, 903, 1113, 1684, 1704
BseNI ACTGG 7 cut(s) 81, 104, 427, 792, 805, 878, 1947
BseRI GAGGAG 1 cut(s) 1260
BseSI GKGCMC 3 cut(s) 526, 2077, 2520
BseXI GCAGC 4 cut(s) 1874, 2005, 2314, 2326
BseYI CCCAGC 2 cut(s) 1496, 1992
BshFI GGCC 5 cut(s) 426, 1185, 1594, 1835, 2391
BshNI GGYRCC 1 cut(s) 1880
BsiHKAI GWGCWC 1 cut(s) 526
BsiHKCI CYCGRG 1 cut(s) 1923
BslFI GGGAC 2 cut(s) 1147, 1994
BslI CCNNNNNNNGG 6 cut(s) 433, 548, 817, 1792, 2254, 2467
BsmAI GTCTC 7 cut(s) 79, 1145, 1171, 1242, 1295, 1556, 1729
BsmBI CGTCTC 1 cut(s) 1729
BsmFI GGGAC 2 cut(s) 1147, 1994
BsmI GAATGC 3 cut(s) 313, 949, 1623
BsnI GGCC 5 cut(s) 426, 1185, 1594, 1835, 2391
Bso31I GGTCTC 2 cut(s) 1145, 1556
BsoBI CYCGRG 1 cut(s) 1923
Bsp1286I GDGCHC 3 cut(s) 526, 2077, 2520
Bsp1407I TGTACA 1 cut(s) 2377
Bsp143I GATC 5 cut(s) 709, 779, 1228, 1339, 1748
BspACI CCGC 6 cut(s) 82, 217, 287, 740, 1186, 1832
BspANI GGCC 5 cut(s) 426, 1185, 1594, 1835, 2391
BspCNI CTCAG 6 cut(s) 684, 763, 904, 1114, 1683, 1705
BspHI TCATGA 1 cut(s) 165
BspLI GGNNCC 4 cut(s) 711, 1135, 1882, 2392
BspMAI CTGCAG 1 cut(s) 2278
BspMI ACCTGC 2 cut(s) 179, 1892
BspOI GCTAGC 1 cut(s) 2006
BspPI GGATC 3 cut(s) 704, 717, 1236
BspT107I GGYRCC 1 cut(s) 1880
BspTI CTTAAG 1 cut(s) 1481
BspTNI GGTCTC 2 cut(s) 1145, 1556
BsrBI CCGCTC 1 cut(s) 82
BsrDI GCAATG 1 cut(s) 964
BsrGI TGTACA 1 cut(s) 2377
BsrI ACTGG 7 cut(s) 81, 104, 427, 792, 805, 878, 1947
BssECI CCNNGG 2 cut(s) 427, 428
BssMI GATC 5 cut(s) 709, 779, 1228, 1339, 1748
BssNAI GTATAC 1 cut(s) 297
BssNI GRCGYC 1 cut(s) 1741
BssSI CACGAG 1 cut(s) 1875
Bst1107I GTATAC 1 cut(s) 297
Bst2BI CACGAG 1 cut(s) 1875
Bst2UI CCWGG 2 cut(s) 429, 1453
Bst4CI ACNGT 3 cut(s) 1355, 2065, 2500
Bst6I CTCTTC 1 cut(s) 27
BstACI GRCGYC 1 cut(s) 1741
BstAFI CTTAAG 1 cut(s) 1481
BstAUI TGTACA 1 cut(s) 2377
BstC8I GCNNGC 9 cut(s) 50, 342, 600, 694, 1048, 1190, 1592, 1861, 2004
BstDEI CTNAG 8 cut(s) 197, 671, 756, 771, 912, 1122, 1670, 1713
BstF5I GGATG 7 cut(s) 394, 438, 442, 1425, 2165, 2283, 2476
BstH2I RGCGCY 1 cut(s) 699
BstHHI GCGC 1 cut(s) 698
BstKTI GATC 5 cut(s) 712, 782, 1231, 1342, 1751
BstMAI GTCTC 7 cut(s) 79, 1145, 1171, 1242, 1295, 1556, 1729
BstMBI GATC 5 cut(s) 709, 779, 1228, 1339, 1748
BstMWI GCNNNNNNNGC 2 cut(s) 1056, 2336
BstNI CCWGG 2 cut(s) 429, 1453
BstNSI RCATGY 3 cut(s) 247, 1494, 1863
BstSCI CCNGG 2 cut(s) 427, 1451
BstSFI CTRYAG 2 cut(s) 456, 2274
BstSLI GKGCMC 3 cut(s) 526, 2077, 2520
BstV1I GCAGC 4 cut(s) 1874, 2005, 2314, 2326
BstV2I GAAGAC 1 cut(s) 872
BstX2I RGATCY 3 cut(s) 709, 1228, 1748
BstXI CCANNNNNNTGG 2 cut(s) 589, 2056
BstYI RGATCY 3 cut(s) 709, 1228, 1748
BstZ17I GTATAC 1 cut(s) 297
BsuI GTATCC 2 cut(s) 1639, 1912
BsuRI GGCC 5 cut(s) 426, 1185, 1594, 1835, 2391
BtsCI GGATG 7 cut(s) 394, 438, 442, 1425, 2165, 2283, 2476
BtsIMutI CAGTG 5 cut(s) 74, 420, 679, 812, 1678
BveI ACCTGC 2 cut(s) 179, 1892
Cac8I GCNNGC 9 cut(s) 50, 342, 600, 694, 1048, 1190, 1592, 1861, 2004
CciI TCATGA 1 cut(s) 165
CfoI GCGC 1 cut(s) 698
Cfr13I GGNCC 6 cut(s) 425, 569, 962, 1134, 1449, 2390
CseI GACGC 1 cut(s) 1749
Csp6I GTAC 6 cut(s) 225, 532, 1881, 2087, 2119, 2378
CspCI CAANNNNNGTGG 4 cut(s) 329, 364, 2299, 2334
CviQI GTAC 6 cut(s) 225, 532, 1881, 2087, 2119, 2378
DdeI CTNAG 8 cut(s) 197, 671, 756, 771, 912, 1122, 1670, 1713
DpnI GATC 5 cut(s) 711, 781, 1230, 1341, 1750
DpnII GATC 5 cut(s) 709, 779, 1228, 1339, 1748
DraIII CACNNNGTG 1 cut(s) 1673
DriI GACNNNNNGTC 1 cut(s) 1158
EaeI YGGCCR 2 cut(s) 1183, 1833
Eam1104I CTCTTC 1 cut(s) 27
Eam1105I GACNNNNNGTC 1 cut(s) 1158
EarI CTCTTC 1 cut(s) 27
Eco147I AGGCCT 1 cut(s) 1594
Eco31I GGTCTC 2 cut(s) 1145, 1556
Eco47I GGWCC 4 cut(s) 569, 962, 1134, 1449
Eco57I CTGAAG 6 cut(s) 735, 836, 968, 1073, 1869, 2043
Eco88I CYCGRG 1 cut(s) 1923
EcoO109I RGGNCCY 1 cut(s) 1449
EcoRI GAATTC 1 cut(s) 2570
EcoRII CCWGG 2 cut(s) 427, 1451
Esp3I CGTCTC 1 cut(s) 1729
FaqI GGGAC 2 cut(s) 1147, 1994
FauI CCCGC 1 cut(s) 210
FauNDI CATATG 1 cut(s) 2584
FblI GTMKAC 1 cut(s) 296
Fnu4HI GCNGC 6 cut(s) 1186, 1833, 1888, 2019, 2328, 2340
FokI GGATG 7 cut(s) 401, 445, 449, 1432, 2172, 2270, 2483
Fsp4HI GCNGC 6 cut(s) 1186, 1833, 1888, 2019, 2328, 2340
FspBI CTAG 5 cut(s) 777, 1343, 1989, 2003, 2331
GlaI GCGC 1 cut(s) 697
GluI GCNGC 6 cut(s) 1186, 1833, 1888, 2019, 2328, 2340
GsaI CCCAGC 2 cut(s) 1500, 1996
GsuI CTGGAG 2 cut(s) 98, 788
HaeII RGCGCY 1 cut(s) 699
HaeIII GGCC 5 cut(s) 426, 1185, 1594, 1835, 2391
HgaI GACGC 1 cut(s) 1749
HhaI GCGC 1 cut(s) 698
Hin1I GRCGYC 1 cut(s) 1741
Hin6I GCGC 1 cut(s) 696
HinP1I GCGC 1 cut(s) 696
HincII GTYRAC 1 cut(s) 394
HindII GTYRAC 1 cut(s) 394
HindIII AAGCTT 1 cut(s) 748
HphI GGTGA 3 cut(s) 938, 1583, 2071
Hpy166II GTNNAC 6 cut(s) 297, 394, 524, 569, 2119, 2380
Hpy188I TCNGA 8 cut(s) 11, 255, 682, 772, 1123, 1176, 1609, 1849
Hpy8I GTNNAC 6 cut(s) 297, 394, 524, 569, 2119, 2380
Hpy99I CGWCG 1 cut(s) 1743
HpyAV CCTTC 7 cut(s) 682, 811, 1440, 1541, 1605, 1844, 2096
HpyCH4III ACNGT 3 cut(s) 1355, 2065, 2500
HpyCH4IV ACGT 1 cut(s) 2400
HpyF10VI GCNNNNNNNGC 2 cut(s) 1056, 2336
HpyF3I CTNAG 8 cut(s) 197, 671, 756, 771, 912, 1122, 1670, 1713
HpySE526I ACGT 1 cut(s) 2400
Hsp92I GRCGYC 1 cut(s) 1741
HspAI GCGC 1 cut(s) 696
KpnI GGTACC 1 cut(s) 1884
Kzo9I GATC 5 cut(s) 709, 779, 1228, 1339, 1748
LmnI GCTCC 2 cut(s) 79, 1487
Lsp1109I GCAGC 4 cut(s) 1874, 2005, 2314, 2326
LweI GCATC 6 cut(s) 118, 652, 1189, 1297, 1672, 1762
MaeI CTAG 5 cut(s) 777, 1343, 1989, 2003, 2331
MaeII ACGT 1 cut(s) 2400
MaeIII GTNAC 5 cut(s) 110, 188, 2059, 2212, 2500
MalI GATC 5 cut(s) 711, 781, 1230, 1341, 1750
MbiI CCGCTC 1 cut(s) 82
MboI GATC 5 cut(s) 709, 779, 1228, 1339, 1748
MboII GAAGA 9 cut(s) 44, 110, 603, 728, 731, 860, 877, 2051, 2402
MfeI CAATTG 1 cut(s) 1527
MflI RGATCY 3 cut(s) 709, 1228, 1748
MhlI GDGCHC 3 cut(s) 526, 2077, 2520
MlyI GAGTC 3 cut(s) 1127, 1916, 1976
MmeI TCCRAC 3 cut(s) 1346, 1773, 2547
MroXI GAANNNNTTC 1 cut(s) 42
MslI CAYNNNNRTG 3 cut(s) 184, 2385, 2451
MspA1I CMGCKG 1 cut(s) 1760
MspCI CTTAAG 1 cut(s) 1481
MspR9I CCNGG 2 cut(s) 429, 1453
MunI CAATTG 1 cut(s) 1527
Mva1269I GAATGC 3 cut(s) 313, 949, 1623
MvaI CCWGG 2 cut(s) 429, 1453
MwoI GCNNNNNNNGC 2 cut(s) 1056, 2336
NdeI CATATG 1 cut(s) 2584
NdeII GATC 5 cut(s) 709, 779, 1228, 1339, 1748
NheI GCTAGC 1 cut(s) 2002
NlaIV GGNNCC 4 cut(s) 711, 1135, 1882, 2392
NmuCI GTSAC 3 cut(s) 188, 2059, 2212
NspI RCATGY 3 cut(s) 247, 1494, 1863
OliI CACNNNNGTG 2 cut(s) 184, 2385
PaeI GCATGC 1 cut(s) 1863
PagI TCATGA 1 cut(s) 165
PasI CCCWGGG 1 cut(s) 428
PceI AGGCCT 1 cut(s) 1594
PciI ACATGT 1 cut(s) 243
PctI GAATGC 3 cut(s) 313, 949, 1623
PdmI GAANNNNTTC 1 cut(s) 42
PfeI GAWTC 8 cut(s) 250, 626, 649, 916, 1562, 1871, 2042, 2053
PflMI CCANNNNNTGG 1 cut(s) 1792
PkrI GCNGC 6 cut(s) 1187, 1834, 1889, 2020, 2329, 2341
PleI GAGTC 3 cut(s) 1126, 1915, 1976
PpsI GAGTC 3 cut(s) 1126, 1915, 1976
PpuMI RGGWCCY 1 cut(s) 1449
PscI ACATGT 1 cut(s) 243
PsiI TTATAA 1 cut(s) 1433
Psp5II RGGWCCY 1 cut(s) 1449
Psp6I CCWGG 2 cut(s) 427, 1451
PspFI CCCAGC 2 cut(s) 1496, 1992
PspGI CCWGG 2 cut(s) 427, 1451
PspN4I GGNNCC 4 cut(s) 711, 1135, 1882, 2392
PspPI GGNCC 6 cut(s) 425, 569, 962, 1134, 1449, 2390
PspPPI RGGWCCY 1 cut(s) 1449
PstI CTGCAG 1 cut(s) 2278
PsuI RGATCY 3 cut(s) 709, 1228, 1748
PvuII CAGCTG 1 cut(s) 1760
RsaI GTAC 6 cut(s) 226, 533, 1882, 2088, 2120, 2379
RsaNI GTAC 6 cut(s) 225, 532, 1881, 2087, 2119, 2378
RseI CAYNNNNRTG 3 cut(s) 184, 2385, 2451
SatI GCNGC 6 cut(s) 1186, 1833, 1888, 2019, 2328, 2340
Sau3AI GATC 5 cut(s) 709, 779, 1228, 1339, 1748
Sau96I GGNCC 6 cut(s) 425, 569, 962, 1134, 1449, 2390
ScaI AGTACT 1 cut(s) 226
SchI GAGTC 3 cut(s) 1127, 1916, 1976
ScrFI CCNGG 2 cut(s) 429, 1453
SduI GDGCHC 3 cut(s) 526, 2077, 2520
SfaNI GCATC 6 cut(s) 118, 652, 1189, 1297, 1672, 1762
SfcI CTRYAG 2 cut(s) 456, 2274
SinI GGWCC 4 cut(s) 569, 962, 1134, 1449
SmiMI CAYNNNNRTG 3 cut(s) 184, 2385, 2451
SmlI CTYRAG 3 cut(s) 1232, 1397, 1481
SmoI CTYRAG 3 cut(s) 1232, 1397, 1481
SphI GCATGC 1 cut(s) 1863
SseBI AGGCCT 1 cut(s) 1594
SsiI CCGC 6 cut(s) 82, 217, 287, 740, 1186, 1832
SspI AATATT 1 cut(s) 1019
SspMI CTAG 5 cut(s) 777, 1343, 1989, 2003, 2331
StuI AGGCCT 1 cut(s) 1594
StyD4I CCNGG 2 cut(s) 427, 1451
TaaI ACNGT 3 cut(s) 1355, 2065, 2500
TaiI ACGT 1 cut(s) 2403
TaqI TCGA 2 cut(s) 1869, 2413
TatI WGTACW 2 cut(s) 224, 2377
TauI GCSGC 2 cut(s) 1188, 1835
TfiI GAWTC 8 cut(s) 250, 626, 649, 916, 1562, 1871, 2042, 2053
TscAI CASTG 5 cut(s) 81, 427, 679, 812, 1678
TseFI GTSAC 3 cut(s) 188, 2059, 2212
TseI GCWGC 4 cut(s) 1887, 2018, 2327, 2339
Tsp45I GTSAC 3 cut(s) 188, 2059, 2212
TspGWI ACGGA 3 cut(s) 519, 759, 2535
TspRI CASTG 5 cut(s) 81, 427, 679, 812, 1678
Van91I CCANNNNNTGG 1 cut(s) 1792
Vha464I CTTAAG 1 cut(s) 1481
VneI GTGCAC 1 cut(s) 522
VpaK11BI GGWCC 4 cut(s) 569, 962, 1134, 1449
XapI RAATTY 9 cut(s) 160, 1101, 1144, 1378, 1427, 1957, 2148, 2489, 2570
XceI RCATGY 3 cut(s) 247, 1494, 1863
XcmI CCANNNNNNNNNTGG 1 cut(s) 1562
XmiI GTMKAC 1 cut(s) 296
XmnI GAANNNNTTC 1 cut(s) 42
XspI CTAG 5 cut(s) 777, 1343, 1989, 2003, 2331
ZrmI AGTACT 1 cut(s) 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.