RchiOBHm_Chr1g0341621

DNA repair helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001033
Physical Location & Seq
Reverse (-)
33374025 .. 33379197
5173 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56830

Sequence Viewer

Length: 1983 bp
ATGGGACACGGTGACAAAGGCCGACCCAATAAGAAGCTCAGACTCTCTATCAAGGAAAAATCAAATGTGCAAAACGACGACGTACACTGCTGCAGCGGTGAGGAAGAAGACAATGTCCCCCATGGTGGTGAAGGGAAATACAAAGATTTTACCAAACTAGAATTGAAGCCTGACCACCCTAACCGCCCTATATGGGCTTGCCCTGATGGCCGAATATTCCTCGAATCTTTCTCTGCTGTGTACAAACAAGCCTATGATTTCCTCATTGCCATTGCCGAACCTGTTTGCAGGCAAGAGTTGATGCACGAGTATAACTTGACCCCGCATTCGCTGTATGCGGCTGTGTCAGTTGGTCTTGCTACGGAGACCATTATTTCTGTACTTAATAAGCTGTCAAAGGTCAACCTGCCGAGAGAAGTTATTGATTTCATACACGCTTCTACTGCTAATTATGGCAAACTGAAGCTCGTGCTTAAGAAGAATCGCTACTTTGTGGAATCCCCATTCCCTGAGGCAAGAGTATTGGAAATATTGCTTAAGGACGACTTTATATCTCAATCAAGGATTGCTTCGGAGGGTTGTCATGGAACTGGTGGTTTCACAATTAGCACAACAATGGGTGAGATTGGAGCTGGTCCAAGTGATTTGCTAAATGAAGCAGAATTGGCAGCTGCCGCTGAAGAAAAAGAAACTCATGCATTTGAAATTGATCCTTCAAAGGTTGAGAATGTTAAGCAGCGTTGCTTGCCAGAATCTTTGAACTATCCCATGTTGGAGGAGTATGACTTCAGAAATGATACAGTTAACCCTGATCTTGACATGGAACTAAAGCCTCAAGCGCAACCACGACCATATCAGGAGAAGAGCTTGAGTAAAATGTTTGGGAACGGGAGAGCAAGATCTGGTATAATTGTACTTCCTTGTGGTGCCGGAAAGTCTCTAGTTGGTGTTTCTGCTGCCTCCAGGATAAGAAAGAGCTGCCTTTGTTTAGCAACAAATGCTGTTTCTGTTGATCAGTGGGCTTTTCAGTTTAAGTTGTGGTCAACCATCCGAGATGAACAAATTTGTCGTTTCACATCTGATAGTAAAGAAAGAATCCGTGGAAATGCTGGGGTAAGGTCTGAAGAATCTGAAAAGATCATTGAAGAAATAAGAAACAGAGAATGGGGATTGCTTCTCATGGATGAGGTGCACGTCGTTCCTGCTGAAATGTTTCGAAATGTCATCAGGCTTACTAAATCTCACTGCAAGCTTGGTCTCACCGCCACACTTGTGAGAGAGGATGAGAAGATCACAGACCTTAACTTCCTTATTGGTCCAAAGTTGTATGAAGCAAACTGGTTGGATTTGGTTAAAGGTGGATTTATTGCAAATGTACAGTGTGCTGAAGTATGGTGTCCAATGACAAAAGAGTTTTTTGTGGAATATTTGAAGAAAGAAAACTCAAAGAAAAAGCAGGCACTTTATGTCATGAATCCAAATAAGTTTAGGGCATGCGAGTTTCTTATAAGGTTTCATGAAGAGCAACGTGGTGATAAAATTATTGTGTTTGCTGACAATCTCTTTGCCCTCGCGAAGTATGCAAAGAAACTTCGGAAACCTATGATCTGTGGTAGTACCAGGTTGTTCATGGACATTGTCCATGTGGAGAGGACAAAAATTCTAGAAGCCTTCAAAACAAGTCAGGACATAAATACTGTTTTCTTGTCTAAGGTGGGTGATAATTCCATAGACATTCCTGAGGCAAATGTGATTATTCAGATTTCATCACATGCTGGTTCAAGACGTCAAGAAGCACAGCGTCTTGGTCGTATTTTAAGAGCTAAGGATTCCTCCATCCTTGTTTGTCATCTTTTTTACCGAAACGCTAACGTCTTGGTTACATTCTTTCTGCATAAGATAGAGTTTTTCTTTTCTATTGAATCCGGAAATCAGATTAGTAGGCATAGTTCATTAATATCGAACTTGTACTCTGTTATATAA

Protein Analysis

660

Amino Acids

74.76

Weight (kDa)

8.03

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Helicase_C_3 PF13625 64 - 189 3.1e-29 Helicase conserved C-terminal domain
ResIII PF04851 281 - 425 2e-14 Type III restriction enzyme, res subunit
ERCC3_RAD25_C PF16203 450 - 612 4.8e-79 ERCC3/RAD25/XPB C-terminal helicase
Helicase_C PF00271 500 - 608 6.1e-12 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1508
AatII GACGTC 1 cut(s) 1789
Acc36I ACCTGC 1 cut(s) 414
AccB1I GGYRCC 1 cut(s) 926
AccII CGCG 1 cut(s) 1574
AccIII TCCGGA 1 cut(s) 1925
AciI CCGC 6 cut(s) 96, 184, 323, 338, 675, 1263
AclWI GGATC 1 cut(s) 704
AcoI YGGCCR 1 cut(s) 208
AcsI RAATTY 2 cut(s) 1062, 1659
AcuI CTGAAG 5 cut(s) 482, 699, 772, 1143, 1407
AcyI GRCGYC 1 cut(s) 1786
AfaI GTAC 7 cut(s) 84, 242, 381, 915, 1377, 1618, 1970
AfiI CCNNNNNNNGG 2 cut(s) 125, 193
AflII CTTAAG 2 cut(s) 473, 536
AgsI TTSAA 9 cut(s) 166, 704, 717, 760, 1145, 1432, 1675, 1782, 1922
AjiI CACGTC 1 cut(s) 1195
AjnI CCWGG 2 cut(s) 962, 1619
AleI CACNNNNGTG 1 cut(s) 1271
AluBI AGCT 9 cut(s) 37, 391, 466, 632, 671, 867, 978, 1252, 1823
AluI AGCT 9 cut(s) 37, 391, 466, 632, 671, 867, 978, 1252, 1823
Alw21I GWGCWC 1 cut(s) 1194
Alw26I GTCTC 3 cut(s) 359, 942, 1262
Alw44I GTGCAC 1 cut(s) 1190
AlwI GGATC 1 cut(s) 704
Aor13HI TCCGGA 1 cut(s) 1925
AoxI GGCC 2 cut(s) 19, 208
ApaLI GTGCAC 1 cut(s) 1190
ApeKI GCWGC 7 cut(s) 90, 93, 668, 671, 736, 956, 978
ApoI RAATTY 2 cut(s) 1062, 1659
ArsI GACNNNNNNTTYG 4 cut(s) 310, 342, 1547, 1579
AseI ATTAAT 1 cut(s) 1955
Asp700I GAANNNNTTC 1 cut(s) 1212
AspLEI GCGC 1 cut(s) 841
AspS9I GGNCC 2 cut(s) 635, 1316
AsuHPI GGTGA 7 cut(s) 23, 110, 140, 632, 1252, 1544, 1730
AsuII TTCGAA 1 cut(s) 1216
AvaII GGWCC 2 cut(s) 635, 1316
AxyI CCTNAGG 2 cut(s) 510, 1740
BaeGI GKGCMC 1 cut(s) 1194
BanI GGYRCC 1 cut(s) 926
BarI GAAGNNNNNNTAC 2 cut(s) 470, 502
BauI CACGAG 2 cut(s) 305, 467
BbsI GAAGAC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 1194
BbvI GCAGC 7 cut(s) 77, 105, 658, 680, 748, 943, 965
BccI CCATC 3 cut(s) 200, 1055, 1844
BciT130I CCWGG 2 cut(s) 964, 1621
BclI TGATCA 1 cut(s) 1012
BcoDI GTCTC 3 cut(s) 359, 942, 1262
BfaI CTAG 3 cut(s) 158, 941, 1664
BfmI CTRYAG 1 cut(s) 91
BfrI CTTAAG 2 cut(s) 473, 536
BfuAI ACCTGC 1 cut(s) 414
BglI GCCNNNNNGGC 1 cut(s) 207
BglII AGATCT 1 cut(s) 899
BisI GCNGC 9 cut(s) 91, 94, 339, 669, 672, 675, 737, 957, 979
BlsI GCNGC 9 cut(s) 92, 95, 340, 670, 673, 676, 738, 958, 980
Bme1390I CCNGG 2 cut(s) 964, 1621
Bme18I GGWCC 2 cut(s) 635, 1316
BmgBI CACGTC 1 cut(s) 1195
BmgT120I GGNCC 2 cut(s) 635, 1316
BmiI GGNNCC 1 cut(s) 928
BmrFI CCNGG 2 cut(s) 964, 1621
BmsI GCATC 1 cut(s) 291
BpiI GAAGAC 1 cut(s) 114
BpmI CTGGAG 1 cut(s) 946
Bpu10I CCTNAGC 1 cut(s) 1824
Bpu14I TTCGAA 1 cut(s) 1216
BpuEI CTTGAG 2 cut(s) 819, 889
BsaHI GRCGYC 1 cut(s) 1786
BsaI GGTCTC 2 cut(s) 359, 1262
BsaJI CCNNGG 2 cut(s) 121, 1099
BsaWI WCCGGW 1 cut(s) 1925
Bsc4I CCNNNNNNNGG 2 cut(s) 125, 193
Bse1I ACTGG 2 cut(s) 595, 1343
Bse21I CCTNAGG 2 cut(s) 510, 1740
Bse3DI GCAATG 2 cut(s) 264, 270
BseAI TCCGGA 1 cut(s) 1925
BseBI CCWGG 2 cut(s) 964, 1621
BseDI CCNNGG 2 cut(s) 121, 1099
BseGI GGATG 4 cut(s) 1047, 1189, 1288, 1836
BseLI CCNNNNNNNGG 2 cut(s) 125, 193
BseMI GCAATG 2 cut(s) 264, 270
BseMII CTCAG 3 cut(s) 52, 501, 1731
BseNI ACTGG 2 cut(s) 595, 1343
BseRI GAGGAG 1 cut(s) 791
BseSI GKGCMC 1 cut(s) 1194
BseXI GCAGC 7 cut(s) 77, 105, 658, 680, 748, 943, 965
BseYI CCCAGC 1 cut(s) 1109
Bsh1236I CGCG 1 cut(s) 1574
BshFI GGCC 2 cut(s) 21, 210
BshNI GGYRCC 1 cut(s) 926
BsiHKAI GWGCWC 1 cut(s) 1194
BsiSI CCGG 2 cut(s) 930, 1926
BslFI GGGAC 2 cut(s) 18, 101
BslI CCNNNNNNNGG 2 cut(s) 125, 193
BsmAI GTCTC 3 cut(s) 359, 942, 1262
BsmFI GGGAC 2 cut(s) 18, 101
BsmI GAATGC 1 cut(s) 325
BsnI GGCC 2 cut(s) 21, 210
Bso31I GGTCTC 2 cut(s) 359, 1262
Bsp119I TTCGAA 1 cut(s) 1216
Bsp1286I GDGCHC 1 cut(s) 1194
Bsp13I TCCGGA 1 cut(s) 1925
Bsp1407I TGTACA 2 cut(s) 240, 1375
Bsp143I GATC 7 cut(s) 709, 811, 899, 1012, 1137, 1290, 1605
Bsp19I CCATGG 1 cut(s) 121
Bsp68I TCGCGA 1 cut(s) 1574
BspACI CCGC 6 cut(s) 96, 184, 323, 338, 675, 1263
BspANI GGCC 2 cut(s) 21, 210
BspCNI CTCAG 3 cut(s) 51, 502, 1732
BspEI TCCGGA 1 cut(s) 1925
BspFNI CGCG 1 cut(s) 1574
BspHI TCATGA 2 cut(s) 1470, 1516
BspLI GGNNCC 1 cut(s) 928
BspMAI CTGCAG 1 cut(s) 95
BspMI ACCTGC 1 cut(s) 414
BspPI GGATC 1 cut(s) 704
BspQI GCTCTTC 2 cut(s) 857, 1515
BspT104I TTCGAA 1 cut(s) 1216
BspT107I GGYRCC 1 cut(s) 926
BspTI CTTAAG 2 cut(s) 473, 536
BspTNI GGTCTC 2 cut(s) 359, 1262
BsrDI GCAATG 2 cut(s) 264, 270
BsrGI TGTACA 2 cut(s) 240, 1375
BsrI ACTGG 2 cut(s) 595, 1343
BssECI CCNNGG 2 cut(s) 121, 1099
BssMI GATC 7 cut(s) 709, 811, 899, 1012, 1137, 1290, 1605
BssNI GRCGYC 1 cut(s) 1786
BssSI CACGAG 2 cut(s) 305, 467
BssT1I CCWWGG 1 cut(s) 121
Bst2BI CACGAG 2 cut(s) 305, 467
Bst2UI CCWGG 2 cut(s) 964, 1621
Bst4CI ACNGT 4 cut(s) 11, 802, 1380, 1699
Bst6I CTCTTC 2 cut(s) 857, 1515
BstACI GRCGYC 1 cut(s) 1786
BstAFI CTTAAG 2 cut(s) 473, 536
BstAPI GCANNNNNTGC 1 cut(s) 998
BstAUI TGTACA 2 cut(s) 240, 1375
BstBI TTCGAA 1 cut(s) 1216
BstC8I GCNNGC 6 cut(s) 199, 290, 746, 1250, 1458, 1495
BstDEI CTNAG 5 cut(s) 38, 510, 1710, 1740, 1824
BstDSI CCRYGG 2 cut(s) 121, 1099
BstF5I GGATG 4 cut(s) 1047, 1189, 1288, 1836
BstFNI CGCG 1 cut(s) 1574
BstHHI GCGC 1 cut(s) 841
BstKTI GATC 7 cut(s) 712, 814, 902, 1015, 1140, 1293, 1608
BstMAI GTCTC 3 cut(s) 359, 942, 1262
BstMBI GATC 7 cut(s) 709, 811, 899, 1012, 1137, 1290, 1605
BstMWI GCNNNNNNNGC 8 cut(s) 207, 443, 665, 674, 745, 838, 998, 1580
BstNI CCWGG 2 cut(s) 964, 1621
BstNSI RCATGY 2 cut(s) 1497, 1775
BstSCI CCNGG 2 cut(s) 962, 1619
BstSFI CTRYAG 1 cut(s) 91
BstSLI GKGCMC 1 cut(s) 1194
BstUI CGCG 1 cut(s) 1574
BstV1I GCAGC 7 cut(s) 77, 105, 658, 680, 748, 943, 965
BstV2I GAAGAC 1 cut(s) 114
BstX2I RGATCY 1 cut(s) 899
BstYI RGATCY 1 cut(s) 899
Bsu36I CCTNAGG 2 cut(s) 510, 1740
BsuRI GGCC 2 cut(s) 21, 210
BtgI CCRYGG 2 cut(s) 121, 1099
BtrI CACGTC 1 cut(s) 1195
BtsCI GGATG 4 cut(s) 1047, 1189, 1288, 1836
BtsI GCAGTG 2 cut(s) 85, 1243
BtsIMutI CAGTG 4 cut(s) 85, 1022, 1243, 1385
BtuMI TCGCGA 1 cut(s) 1574
BveI ACCTGC 1 cut(s) 414
Cac8I GCNNGC 6 cut(s) 199, 290, 746, 1250, 1458, 1495
CciI TCATGA 2 cut(s) 1470, 1516
CfoI GCGC 1 cut(s) 841
Cfr13I GGNCC 2 cut(s) 635, 1316
CseI GACGC 1 cut(s) 1790
CsiI ACCWGGT 1 cut(s) 1619
Csp6I GTAC 7 cut(s) 83, 241, 380, 914, 1376, 1617, 1969
CviQI GTAC 7 cut(s) 83, 241, 380, 914, 1376, 1617, 1969
DdeI CTNAG 5 cut(s) 38, 510, 1710, 1740, 1824
DpnI GATC 7 cut(s) 711, 813, 901, 1014, 1139, 1292, 1607
DpnII GATC 7 cut(s) 709, 811, 899, 1012, 1137, 1290, 1605
EaeI YGGCCR 1 cut(s) 208
Eam1104I CTCTTC 2 cut(s) 857, 1515
EarI CTCTTC 2 cut(s) 857, 1515
Eco130I CCWWGG 1 cut(s) 121
Eco31I GGTCTC 2 cut(s) 359, 1262
Eco47I GGWCC 2 cut(s) 635, 1316
Eco57I CTGAAG 5 cut(s) 482, 699, 772, 1143, 1407
Eco81I CCTNAGG 2 cut(s) 510, 1740
EcoRII CCWGG 2 cut(s) 962, 1619
EcoT14I CCWWGG 1 cut(s) 121
EcoT22I ATGCAT 1 cut(s) 700
ErhI CCWWGG 1 cut(s) 121
FalI AAGNNNNNCTT 4 cut(s) 530, 562, 553, 585
FaqI GGGAC 2 cut(s) 18, 101
FauI CCCGC 1 cut(s) 330
FbaI TGATCA 1 cut(s) 1012
Fnu4HI GCNGC 9 cut(s) 91, 94, 339, 669, 672, 675, 737, 957, 979
FokI GGATG 4 cut(s) 1034, 1196, 1295, 1823
Fsp4HI GCNGC 9 cut(s) 91, 94, 339, 669, 672, 675, 737, 957, 979
FspBI CTAG 3 cut(s) 158, 941, 1664
GlaI GCGC 1 cut(s) 840
GluI GCNGC 9 cut(s) 91, 94, 339, 669, 672, 675, 737, 957, 979
GsaI CCCAGC 1 cut(s) 1113
GsuI CTGGAG 1 cut(s) 946
HaeIII GGCC 2 cut(s) 21, 210
HapII CCGG 2 cut(s) 930, 1926
HgaI GACGC 1 cut(s) 1790
HhaI GCGC 1 cut(s) 841
Hin1I GRCGYC 1 cut(s) 1786
Hin6I GCGC 1 cut(s) 839
HinP1I GCGC 1 cut(s) 839
HincII GTYRAC 3 cut(s) 403, 805, 1044
HindII GTYRAC 3 cut(s) 403, 805, 1044
HindIII AAGCTT 1 cut(s) 1250
HpaI GTTAAC 1 cut(s) 805
HpaII CCGG 2 cut(s) 930, 1926
HphI GGTGA 7 cut(s) 23, 110, 140, 632, 1252, 1544, 1730
Hpy166II GTNNAC 6 cut(s) 85, 241, 403, 805, 1044, 1192
Hpy8I GTNNAC 6 cut(s) 85, 241, 403, 805, 1044, 1192
Hpy99I CGWCG 3 cut(s) 80, 83, 1199
HpyAV CCTTC 3 cut(s) 125, 723, 1681
HpyCH4III ACNGT 4 cut(s) 11, 802, 1380, 1699
HpyCH4IV ACGT 5 cut(s) 81, 1194, 1528, 1786, 1872
HpyF10VI GCNNNNNNNGC 8 cut(s) 207, 443, 665, 674, 745, 838, 998, 1580
HpyF3I CTNAG 5 cut(s) 38, 510, 1710, 1740, 1824
HpySE526I ACGT 5 cut(s) 81, 1194, 1528, 1786, 1872
Hsp92I GRCGYC 1 cut(s) 1786
HspAI GCGC 1 cut(s) 839
Kpn2I TCCGGA 1 cut(s) 1925
Ksp22I TGATCA 1 cut(s) 1012
KspAI GTTAAC 1 cut(s) 805
Kzo9I GATC 7 cut(s) 709, 811, 899, 1012, 1137, 1290, 1605
LguI GCTCTTC 2 cut(s) 857, 1515
LmnI GCTCC 1 cut(s) 629
Lsp1109I GCAGC 7 cut(s) 77, 105, 658, 680, 748, 943, 965
LweI GCATC 1 cut(s) 291
MabI ACCWGGT 1 cut(s) 1619
MaeI CTAG 3 cut(s) 158, 941, 1664
MaeII ACGT 5 cut(s) 81, 1194, 1528, 1786, 1872
MaeIII GTNAC 2 cut(s) 11, 1879
MalI GATC 7 cut(s) 711, 813, 901, 1014, 1139, 1292, 1607
MboI GATC 7 cut(s) 709, 811, 899, 1012, 1137, 1290, 1605
MflI RGATCY 1 cut(s) 899
MhlI GDGCHC 1 cut(s) 1194
MlyI GAGTC 1 cut(s) 36
MmeI TCCRAC 2 cut(s) 753, 1323
Mph1103I ATGCAT 1 cut(s) 700
MroI TCCGGA 1 cut(s) 1925
MroXI GAANNNNTTC 1 cut(s) 1212
MslI CAYNNNNRTG 3 cut(s) 126, 614, 1271
MspA1I CMGCKG 3 cut(s) 96, 671, 677
MspCI CTTAAG 2 cut(s) 473, 536
MspI CCGG 2 cut(s) 930, 1926
MspR9I CCNGG 2 cut(s) 964, 1621
Mva1269I GAATGC 1 cut(s) 325
MvaI CCWGG 2 cut(s) 964, 1621
MvnI CGCG 1 cut(s) 1574
MwoI GCNNNNNNNGC 8 cut(s) 207, 443, 665, 674, 745, 838, 998, 1580
NcoI CCATGG 1 cut(s) 121
NdeII GATC 7 cut(s) 709, 811, 899, 1012, 1137, 1290, 1605
NlaIV GGNNCC 1 cut(s) 928
NmeAIII GCCGAG 1 cut(s) 435
NmuCI GTSAC 1 cut(s) 11
NruI TCGCGA 1 cut(s) 1574
NsiI ATGCAT 1 cut(s) 700
NspI RCATGY 2 cut(s) 1497, 1775
NspV TTCGAA 1 cut(s) 1216
OliI CACNNNNGTG 1 cut(s) 1271
PaeI GCATGC 1 cut(s) 1497
PagI TCATGA 2 cut(s) 1470, 1516
PciSI GCTCTTC 2 cut(s) 857, 1515
PctI GAATGC 1 cut(s) 325
PdmI GAANNNNTTC 1 cut(s) 1212
PfeI GAWTC 9 cut(s) 224, 481, 497, 752, 1095, 1127, 1474, 1829, 1922
PflFI GACNNNGTC 2 cut(s) 113, 1637
PfoI TCCNGGA 1 cut(s) 962
PkrI GCNGC 9 cut(s) 92, 95, 340, 670, 673, 676, 738, 958, 980
PleI GAGTC 1 cut(s) 36
PpsI GAGTC 1 cut(s) 36
PshBI ATTAAT 1 cut(s) 1955
PsiI TTATAA 1 cut(s) 1508
Psp6I CCWGG 2 cut(s) 962, 1619
PspFI CCCAGC 1 cut(s) 1109
PspGI CCWGG 2 cut(s) 962, 1619
PspN4I GGNNCC 1 cut(s) 928
PspPI GGNCC 2 cut(s) 635, 1316
PsrI GAACNNNNNNTAC 2 cut(s) 1933, 1965
PstI CTGCAG 1 cut(s) 95
PsuI RGATCY 1 cut(s) 899
PsyI GACNNNGTC 2 cut(s) 113, 1637
PvuII CAGCTG 1 cut(s) 671
RruI TCGCGA 1 cut(s) 1574
RsaI GTAC 7 cut(s) 84, 242, 381, 915, 1377, 1618, 1970
RsaNI GTAC 7 cut(s) 83, 241, 380, 914, 1376, 1617, 1969
RseI CAYNNNNRTG 3 cut(s) 126, 614, 1271
SapI GCTCTTC 2 cut(s) 857, 1515
SatI GCNGC 9 cut(s) 91, 94, 339, 669, 672, 675, 737, 957, 979
Sau3AI GATC 7 cut(s) 709, 811, 899, 1012, 1137, 1290, 1605
Sau96I GGNCC 2 cut(s) 635, 1316
SchI GAGTC 1 cut(s) 36
ScrFI CCNGG 2 cut(s) 964, 1621
SduI GDGCHC 1 cut(s) 1194
SexAI ACCWGGT 1 cut(s) 1619
SfaNI GCATC 1 cut(s) 291
SfcI CTRYAG 1 cut(s) 91
SfuI TTCGAA 1 cut(s) 1216
SinI GGWCC 2 cut(s) 635, 1316
SmiMI CAYNNNNRTG 3 cut(s) 126, 614, 1271
SmlI CTYRAG 4 cut(s) 473, 536, 834, 868
SmoI CTYRAG 4 cut(s) 473, 536, 834, 868
SphI GCATGC 1 cut(s) 1497
SsiI CCGC 6 cut(s) 96, 184, 323, 338, 675, 1263
SspI AATATT 3 cut(s) 216, 531, 1427
SspMI CTAG 3 cut(s) 158, 941, 1664
StyD4I CCNGG 2 cut(s) 962, 1619
StyI CCWWGG 1 cut(s) 121
TaaI ACNGT 4 cut(s) 11, 802, 1380, 1699
TaiI ACGT 5 cut(s) 84, 1197, 1531, 1789, 1875
TaqI TCGA 3 cut(s) 222, 1216, 1961
TatI WGTACW 5 cut(s) 240, 379, 913, 1375, 1968
TauI GCSGC 2 cut(s) 341, 677
TfiI GAWTC 9 cut(s) 224, 481, 497, 752, 1095, 1127, 1474, 1829, 1922
TscAI CASTG 4 cut(s) 92, 1022, 1250, 1385
TseFI GTSAC 1 cut(s) 11
TseI GCWGC 7 cut(s) 90, 93, 668, 671, 736, 956, 978
Tsp45I GTSAC 1 cut(s) 11
TspGWI ACGGA 2 cut(s) 377, 1088
TspRI CASTG 4 cut(s) 92, 1022, 1250, 1385
Tth111I GACNNNGTC 2 cut(s) 113, 1637
Vha464I CTTAAG 2 cut(s) 473, 536
VneI GTGCAC 1 cut(s) 1190
VpaK11BI GGWCC 2 cut(s) 635, 1316
VspI ATTAAT 1 cut(s) 1955
XapI RAATTY 2 cut(s) 1062, 1659
XbaI TCTAGA 1 cut(s) 1663
XceI RCATGY 2 cut(s) 1497, 1775
XcmI CCANNNNNNNNNTGG 1 cut(s) 1627
XmnI GAANNNNTTC 1 cut(s) 1212
XspI CTAG 3 cut(s) 158, 941, 1664
ZraI GACGTC 1 cut(s) 1787
Zsp2I ATGCAT 1 cut(s) 700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.