Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0001033

Physical Location & Seq

Genomic Coordinates Forward (+)

23046256 .. 23050576

Gene Structure 4321 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG138300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGGACACGGTGACAAAGGCCGACCCAATAAAAAGCTCAGACTCTCTATCAAGGAAAAATCAAATGTGCAAAACGACGACGTACACTACTGCAGCGGTGAGGAAGAAGACAATGTCCCGCATGGTGGTGAAGGGAAATACAGAGATTTTACCAAACTAGAATTGAAGCCTGACCACCCTAACCGCCCTATATGGGCTTGCCCTGATGGCCGAATATTCCTCGAATCTTTCTCTGCTGTGTACAAACAAGCTTATGATTTCCTCATTGCCATTGCCGAACCTGTTTGCAGGCAAGAGTTGATGCACGAGTATAACTTAACCCCGCATTCGCTGTATGCGGCTGTGTCAGTTGGTCTTGCGACGGAGACCATTATTTCTGTGCTTAATAAGCTGTCAAAGGTCAACCTGCCGAGAGAAGTTATTGATTTCATACACGCTTCTACTGCTAATTATGGCAAACTGAAGCTCGTGCTTAAGAAGAATCGCTACTTTGTGGAATCCCCATTCCCTGAGGTATTGGAAATATTGCTTAAGGACGACTTTATATCTCAATCAAGGATTGCTTCAGAGGGTTCTCATGGAACTGGTGGTTTCACAATTAGCACAACAATGGGTGAGATTGGAGCTGGTCCAAGTGATTTGCTAAATGAAGCAGAATTGGCAGCTGCCGCTGAAGAAAAAGAAACTCATGCATTTGAAATTGATCCTTCAAAGGTTGAGAATGTTAAGCAGCGTTGCTTGCCAGAATCTTTGAACTATCCCATGTTGGAGGAGTATGACTTCAGAAATGATACAGTTAACCCTGATCTTGACATGGAACTAAAGCCTCAAGCGCAACCACGACCATATCAGGAGAAGAGCTTGAGTAAAATGTTTGGGAACGGGAGAGCAAGATCTGGCATAATTGTACTGCCTTGTGGTGCCGGAAAGTCTCTAGTTGGTGTTTCTGCTGCCTCCAGGATAAGAAAGAGCTGCCTTTGTTTAGCAACAAATGCTGTTTCTGTTGATCAGTGGGCTTTTCAGTTTAAGTTGTGGTCAACCATCCGAGATGAACAAATTTGTCGTTTCACATCTGATAGTAAAGAAAGAATCCGTGGAAATGCTGGGGTAGTTGTGACAACATATAACATGATTGGTTTTGGTGGCAAGAGGTCTGAAGAATCTGAAAAGATCATTGAAGAAATAAGAAACAGAGAATGGGGATTGCTTCTCATGGATGAGGTGCACGTCGTTCCTGCTGAAATGTTTCGAAATGTCATCAGGCTTACTAAATCTCACTGCAAGCTTGGTCTCACCGCCACACTTGTGAGAGAGGATGAGAAGATCACAGACCTTAACTTCCTTATTGGTCCAAAGTTGTATGAAGCAAACTGGTTGGATTTGGTTAAAGGTGGATTTATTGCAAACGTACAGTGTGCTGAAGTTTGGTGTCCAATGACAAAAGAGTTTTTTGTGGAATATTTGAAGAAAGAAAACTCAAAGAAAAAGCAGGCACTTTATGTCATGAATCCAAATAAGTTTAGGGCATGCGAGTTTCTTATAAGGTTTCATGAAGAGCAACGTACGTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0010224 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko03022 ko03420 map03022 map03420

Pfam Domains

Protein Families

ERCC3_RAD25_C Helicase_C_3 ResIII

Protein Analysis

523

Amino Acids

59.26

Weight (kDa)

6.36

Isoelectric Point (pI)

34.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Helicase_C_3	PF13625	64 - 187	1.4e-31	Helicase conserved C-terminal domain
ResIII	PF04851	279 - 436	3.5e-18	Type III restriction enzyme, res subunit
ERCC3_RAD25_C	PF16203	461 - 520	7e-26	ERCC3/RAD25/XPB C-terminal helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001033)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41360 AT5G41360 AT5G41370
fragaria_vesca	FvH4_5g02840 FvH4_5g02840 FvH4_5g02840 FvH4_5g02840 FvH4_5g02840 FvH4_5g19420 FvH4_5g19430 FvH4_7g08220 FvH4_7g08220
malus_domestica	MD06G1087900.v1.1
prunus_persica	Prupe.5G104000_v2.0.a1
pyrus_communis	pycom06g08400
rosa_chinensis	RchiOBHm_Chr1g0341611 RchiOBHm_Chr1g0341621 RchiOBHm_Chr1g0341861 RchiOBHm_Chr7g0197061 RchiOBHm_Chr7g0203931
rosa_laevigata	RLG00000003497 RLG00000003962 RLG00000029105 RLG00000029132
rosa_multiflora	Rmu_co8328521.1_g000001 Rmu_co8329503.1_g000001 Rmu_sc0002302.1_g000034 Rmu_sc0002322.1_g000070 Rmu_sc0003411.1_g000004 Rmu_sc0013871.1_g000001 Rmu_sc0032022.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258690 Rroxscaffold_4G00312270 Rroxscaffold_4G00312590
rosa_rugosa	Rorug01G0154800.1 Rorug07G0037400 Rorug07G0079500
rosa_samantha	Rh1AG168500 Rh1AG170500 Rh1BG136800 Rh1BG138300 Rh1BG138400 Rh1CG156100 Rh1CG158700 Rh1DG170300 Rh1DG170600 Rh1DG170700 Rh7AG162300 Rh7AG209400 Rh7AG209500 Rh7BG164400 Rh7BG208200 Rh7BG208300 Rh7CG170500 Rh7CG221900 Rh7DG163800 Rh7DG216500
rosa_wichuraiana	Rw1G014160 Rw1G014180 Rw7G014170 Rw7G018250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1541
Acc36I	ACCTGC	1 cut(s)	414
AccB1I	GGYRCC	1 cut(s)	920
AciI	CCGC	7 cut(s)	96, 119, 184, 323, 338, 669, 1296
AclWI	GGATC	1 cut(s)	698
AcoI	YGGCCR	1 cut(s)	208
AcsI	RAATTY	1 cut(s)	1056
AcuI	CTGAAG	6 cut(s)	482, 549, 693, 766, 1176, 1440
AfaI	GTAC	5 cut(s)	84, 242, 909, 1410, 1564
AfiI	CCNNNNNNNGG	2 cut(s)	125, 193
AflII	CTTAAG	2 cut(s)	473, 530
AgsI	TTSAA	6 cut(s)	166, 698, 711, 754, 1178, 1465
AjiI	CACGTC	1 cut(s)	1228
AjnI	CCWGG	1 cut(s)	956
AleI	CACNNNNGTG	1 cut(s)	1304
AluBI	AGCT	9 cut(s)	37, 251, 391, 466, 626, 665, 861, 972, 1285
AluI	AGCT	9 cut(s)	37, 251, 391, 466, 626, 665, 861, 972, 1285
Alw21I	GWGCWC	1 cut(s)	1227
Alw26I	GTCTC	3 cut(s)	359, 936, 1295
Alw44I	GTGCAC	1 cut(s)	1223
AlwI	GGATC	1 cut(s)	698
AoxI	GGCC	2 cut(s)	19, 208
ApaLI	GTGCAC	1 cut(s)	1223
ApeKI	GCWGC	6 cut(s)	93, 662, 665, 730, 950, 972
ApoI	RAATTY	1 cut(s)	1056
Asp700I	GAANNNNTTC	1 cut(s)	1245
AspLEI	GCGC	1 cut(s)	835
AspS9I	GGNCC	2 cut(s)	629, 1349
AsuHPI	GGTGA	5 cut(s)	23, 110, 140, 626, 1285
AsuII	TTCGAA	1 cut(s)	1249
AvaII	GGWCC	2 cut(s)	629, 1349
AxyI	CCTNAGG	1 cut(s)	510
BaeGI	GKGCMC	1 cut(s)	1227
BanI	GGYRCC	1 cut(s)	920
BarI	GAAGNNNNNNTAC	2 cut(s)	470, 502
BauI	CACGAG	2 cut(s)	305, 467
BbsI	GAAGAC	1 cut(s)	114
Bbv12I	GWGCWC	1 cut(s)	1227
BbvI	GCAGC	6 cut(s)	105, 652, 674, 742, 937, 959
BccI	CCATC	2 cut(s)	200, 1049
BciT130I	CCWGG	1 cut(s)	958
BclI	TGATCA	1 cut(s)	1006
BcoDI	GTCTC	3 cut(s)	359, 936, 1295
BfaI	CTAG	2 cut(s)	158, 935
BfmI	CTRYAG	1 cut(s)	91
BfrI	CTTAAG	2 cut(s)	473, 530
BfuAI	ACCTGC	1 cut(s)	414
BglI	GCCNNNNNGGC	1 cut(s)	207
BglII	AGATCT	1 cut(s)	893
BisI	GCNGC	8 cut(s)	94, 339, 663, 666, 669, 731, 951, 973
BlsI	GCNGC	8 cut(s)	95, 340, 664, 667, 670, 732, 952, 974
Bme1390I	CCNGG	1 cut(s)	958
Bme18I	GGWCC	2 cut(s)	629, 1349
BmgBI	CACGTC	1 cut(s)	1228
BmgT120I	GGNCC	2 cut(s)	629, 1349
BmiI	GGNNCC	1 cut(s)	922
BmrFI	CCNGG	1 cut(s)	958
BmsI	GCATC	1 cut(s)	291
BpiI	GAAGAC	1 cut(s)	114
BpmI	CTGGAG	1 cut(s)	940
Bpu14I	TTCGAA	1 cut(s)	1249
BpuEI	CTTGAG	2 cut(s)	813, 883
BsaAI	YACGTR	1 cut(s)	1566
BsaI	GGTCTC	2 cut(s)	359, 1295
BsaJI	CCNNGG	1 cut(s)	1093
Bsc4I	CCNNNNNNNGG	2 cut(s)	125, 193
Bse1I	ACTGG	2 cut(s)	589, 1376
Bse21I	CCTNAGG	1 cut(s)	510
Bse3DI	GCAATG	2 cut(s)	264, 270
BseBI	CCWGG	1 cut(s)	958
BseDI	CCNNGG	1 cut(s)	1093
BseGI	GGATG	3 cut(s)	1041, 1222, 1321
BseLI	CCNNNNNNNGG	2 cut(s)	125, 193
BseMI	GCAATG	2 cut(s)	264, 270
BseMII	CTCAG	2 cut(s)	52, 501
BseNI	ACTGG	2 cut(s)	589, 1376
BseRI	GAGGAG	1 cut(s)	785
BseSI	GKGCMC	1 cut(s)	1227
BseXI	GCAGC	6 cut(s)	105, 652, 674, 742, 937, 959
BseYI	CCCAGC	1 cut(s)	1103
BshFI	GGCC	2 cut(s)	21, 210
BshNI	GGYRCC	1 cut(s)	920
BsiHKAI	GWGCWC	1 cut(s)	1227
BsiSI	CCGG	1 cut(s)	924
BsiWI	CGTACG	1 cut(s)	1562
BslFI	GGGAC	2 cut(s)	18, 101
BslI	CCNNNNNNNGG	2 cut(s)	125, 193
BsmAI	GTCTC	3 cut(s)	359, 936, 1295
BsmFI	GGGAC	2 cut(s)	18, 101
BsmI	GAATGC	1 cut(s)	325
BsnI	GGCC	2 cut(s)	21, 210
Bso31I	GGTCTC	2 cut(s)	359, 1295
Bsp119I	TTCGAA	1 cut(s)	1249
Bsp1286I	GDGCHC	1 cut(s)	1227
Bsp1407I	TGTACA	1 cut(s)	240
Bsp143I	GATC	6 cut(s)	703, 805, 893, 1006, 1170, 1323
BspACI	CCGC	7 cut(s)	96, 119, 184, 323, 338, 669, 1296
BspANI	GGCC	2 cut(s)	21, 210
BspCNI	CTCAG	2 cut(s)	51, 502
BspHI	TCATGA	2 cut(s)	1503, 1549
BspLI	GGNNCC	1 cut(s)	922
BspMAI	CTGCAG	1 cut(s)	95
BspMI	ACCTGC	1 cut(s)	414
BspPI	GGATC	1 cut(s)	698
BspQI	GCTCTTC	2 cut(s)	851, 1548
BspT104I	TTCGAA	1 cut(s)	1249
BspT107I	GGYRCC	1 cut(s)	920
BspTI	CTTAAG	2 cut(s)	473, 530
BspTNI	GGTCTC	2 cut(s)	359, 1295
BsrDI	GCAATG	2 cut(s)	264, 270
BsrGI	TGTACA	1 cut(s)	240
BsrI	ACTGG	2 cut(s)	589, 1376
BssECI	CCNNGG	1 cut(s)	1093
BssMI	GATC	6 cut(s)	703, 805, 893, 1006, 1170, 1323
BssSI	CACGAG	2 cut(s)	305, 467
Bst2BI	CACGAG	2 cut(s)	305, 467
Bst2UI	CCWGG	1 cut(s)	958
Bst4CI	ACNGT	3 cut(s)	11, 796, 1413
Bst6I	CTCTTC	2 cut(s)	851, 1548
BstAFI	CTTAAG	2 cut(s)	473, 530
BstAPI	GCANNNNNTGC	1 cut(s)	992
BstAUI	TGTACA	1 cut(s)	240
BstBAI	YACGTR	1 cut(s)	1566
BstBI	TTCGAA	1 cut(s)	1249
BstC8I	GCNNGC	6 cut(s)	199, 290, 740, 1283, 1491, 1528
BstDEI	CTNAG	2 cut(s)	38, 510
BstDSI	CCRYGG	1 cut(s)	1093
BstF5I	GGATG	3 cut(s)	1041, 1222, 1321
BstHHI	GCGC	1 cut(s)	835
BstKTI	GATC	6 cut(s)	706, 808, 896, 1009, 1173, 1326
BstMAI	GTCTC	3 cut(s)	359, 936, 1295
BstMBI	GATC	6 cut(s)	703, 805, 893, 1006, 1170, 1323
BstMWI	GCNNNNNNNGC	8 cut(s)	207, 388, 443, 659, 668, 739, 832, 992
BstNI	CCWGG	1 cut(s)	958
BstNSI	RCATGY	1 cut(s)	1530
BstSCI	CCNGG	1 cut(s)	956
BstSFI	CTRYAG	1 cut(s)	91
BstSLI	GKGCMC	1 cut(s)	1227
BstV1I	GCAGC	6 cut(s)	105, 652, 674, 742, 937, 959
BstV2I	GAAGAC	1 cut(s)	114
BstX2I	RGATCY	1 cut(s)	893
BstYI	RGATCY	1 cut(s)	893
Bsu36I	CCTNAGG	1 cut(s)	510
BsuRI	GGCC	2 cut(s)	21, 210
BtgI	CCRYGG	1 cut(s)	1093
BtrI	CACGTC	1 cut(s)	1228
BtsCI	GGATG	3 cut(s)	1041, 1222, 1321
BtsI	GCAGTG	1 cut(s)	1276
BtsIMutI	CAGTG	3 cut(s)	1016, 1276, 1418
BveI	ACCTGC	1 cut(s)	414
Cac8I	GCNNGC	6 cut(s)	199, 290, 740, 1283, 1491, 1528
CciI	TCATGA	2 cut(s)	1503, 1549
CfoI	GCGC	1 cut(s)	835
Cfr13I	GGNCC	2 cut(s)	629, 1349
Csp6I	GTAC	5 cut(s)	83, 241, 908, 1409, 1563
CspCI	CAANNNNNGTGG	1 cut(s)	1547
CviQI	GTAC	5 cut(s)	83, 241, 908, 1409, 1563
DdeI	CTNAG	2 cut(s)	38, 510
DpnI	GATC	6 cut(s)	705, 807, 895, 1008, 1172, 1325
DpnII	GATC	6 cut(s)	703, 805, 893, 1006, 1170, 1323
EaeI	YGGCCR	1 cut(s)	208
Eam1104I	CTCTTC	2 cut(s)	851, 1548
EarI	CTCTTC	2 cut(s)	851, 1548
Eco31I	GGTCTC	2 cut(s)	359, 1295
Eco47I	GGWCC	2 cut(s)	629, 1349
Eco57I	CTGAAG	6 cut(s)	482, 549, 693, 766, 1176, 1440
Eco81I	CCTNAGG	1 cut(s)	510
EcoRII	CCWGG	1 cut(s)	956
EcoT22I	ATGCAT	1 cut(s)	694
FalI	AAGNNNNNCTT	4 cut(s)	524, 556, 547, 579
FaqI	GGGAC	2 cut(s)	18, 101
FauI	CCCGC	2 cut(s)	126, 330
FbaI	TGATCA	1 cut(s)	1006
Fnu4HI	GCNGC	8 cut(s)	94, 339, 663, 666, 669, 731, 951, 973
FokI	GGATG	3 cut(s)	1028, 1229, 1328
Fsp4HI	GCNGC	8 cut(s)	94, 339, 663, 666, 669, 731, 951, 973
FspBI	CTAG	2 cut(s)	158, 935
GlaI	GCGC	1 cut(s)	834
GluI	GCNGC	8 cut(s)	94, 339, 663, 666, 669, 731, 951, 973
GsaI	CCCAGC	1 cut(s)	1107
GsuI	CTGGAG	1 cut(s)	940
HaeIII	GGCC	2 cut(s)	21, 210
HapII	CCGG	1 cut(s)	924
HhaI	GCGC	1 cut(s)	835
Hin6I	GCGC	1 cut(s)	833
HinP1I	GCGC	1 cut(s)	833
HincII	GTYRAC	3 cut(s)	403, 799, 1038
HindII	GTYRAC	3 cut(s)	403, 799, 1038
HindIII	AAGCTT	2 cut(s)	249, 1283
HinfI	GANTC	8 cut(s)	42, 224, 481, 497, 746, 1089, 1160, 1507
HpaI	GTTAAC	1 cut(s)	799
HpaII	CCGG	1 cut(s)	924
HphI	GGTGA	5 cut(s)	23, 110, 140, 626, 1285
Hpy166II	GTNNAC	6 cut(s)	85, 241, 403, 799, 1038, 1225
Hpy188I	TCNGA	7 cut(s)	41, 568, 785, 1046, 1075, 1156, 1165
Hpy188III	TCNNGA	4 cut(s)	809, 851, 1504, 1550
Hpy8I	GTNNAC	6 cut(s)	85, 241, 403, 799, 1038, 1225
Hpy99I	CGWCG	4 cut(s)	80, 83, 364, 1232
HpyAV	CCTTC	2 cut(s)	125, 717
HpyCH4III	ACNGT	3 cut(s)	11, 796, 1413
HpyCH4IV	ACGT	5 cut(s)	81, 1227, 1407, 1561, 1565
HpyCH4V	TGCA	8 cut(s)	70, 93, 288, 304, 692, 1225, 1281, 1403
HpyF10VI	GCNNNNNNNGC	8 cut(s)	207, 388, 443, 659, 668, 739, 832, 992
HpyF3I	CTNAG	2 cut(s)	38, 510
HpySE526I	ACGT	5 cut(s)	81, 1227, 1407, 1561, 1565
HspAI	GCGC	1 cut(s)	833
Ksp22I	TGATCA	1 cut(s)	1006
KspAI	GTTAAC	1 cut(s)	799
Kzo9I	GATC	6 cut(s)	703, 805, 893, 1006, 1170, 1323
LguI	GCTCTTC	2 cut(s)	851, 1548
LmnI	GCTCC	1 cut(s)	623
Lsp1109I	GCAGC	6 cut(s)	105, 652, 674, 742, 937, 959
LweI	GCATC	1 cut(s)	291
MaeI	CTAG	2 cut(s)	158, 935
MaeII	ACGT	5 cut(s)	81, 1227, 1407, 1561, 1565
MaeIII	GTNAC	2 cut(s)	11, 1114
MalI	GATC	6 cut(s)	705, 807, 895, 1008, 1172, 1325
MboI	GATC	6 cut(s)	703, 805, 893, 1006, 1170, 1323
MflI	RGATCY	1 cut(s)	893
MhlI	GDGCHC	1 cut(s)	1227
MluCI	AATT	7 cut(s)	161, 448, 597, 656, 699, 903, 1056
MlyI	GAGTC	1 cut(s)	36
MmeI	TCCRAC	2 cut(s)	747, 1356
Mph1103I	ATGCAT	1 cut(s)	694
MroXI	GAANNNNTTC	1 cut(s)	1245
MseI	TTAA	9 cut(s)	317, 384, 474, 531, 726, 798, 1026, 1335, 1386
MslI	CAYNNNNRTG	3 cut(s)	126, 608, 1304
MspA1I	CMGCKG	3 cut(s)	96, 665, 671
MspCI	CTTAAG	2 cut(s)	473, 530
MspI	CCGG	1 cut(s)	924
MspR9I	CCNGG	1 cut(s)	958
Mva1269I	GAATGC	1 cut(s)	325
MvaI	CCWGG	1 cut(s)	958
MwoI	GCNNNNNNNGC	8 cut(s)	207, 388, 443, 659, 668, 739, 832, 992
NdeII	GATC	6 cut(s)	703, 805, 893, 1006, 1170, 1323
NlaIV	GGNNCC	1 cut(s)	922
NmeAIII	GCCGAG	1 cut(s)	435
NmuCI	GTSAC	2 cut(s)	11, 1114
NsiI	ATGCAT	1 cut(s)	694
NspI	RCATGY	1 cut(s)	1530
NspV	TTCGAA	1 cut(s)	1249
OliI	CACNNNNGTG	1 cut(s)	1304
PaeI	GCATGC	1 cut(s)	1530
PagI	TCATGA	2 cut(s)	1503, 1549
PciSI	GCTCTTC	2 cut(s)	851, 1548
PctI	GAATGC	1 cut(s)	325
PdmI	GAANNNNTTC	1 cut(s)	1245
PfeI	GAWTC	7 cut(s)	224, 481, 497, 746, 1089, 1160, 1507
Pfl23II	CGTACG	1 cut(s)	1562
PflFI	GACNNNGTC	1 cut(s)	113
PfoI	TCCNGGA	1 cut(s)	956
PkrI	GCNGC	8 cut(s)	95, 340, 664, 667, 670, 732, 952, 974
PleI	GAGTC	1 cut(s)	36
PpsI	GAGTC	1 cut(s)	36
Ppu21I	YACGTR	1 cut(s)	1566
PsiI	TTATAA	1 cut(s)	1541
Psp6I	CCWGG	1 cut(s)	956
PspFI	CCCAGC	1 cut(s)	1103
PspGI	CCWGG	1 cut(s)	956
PspLI	CGTACG	1 cut(s)	1562
PspN4I	GGNNCC	1 cut(s)	922
PspPI	GGNCC	2 cut(s)	629, 1349
PstI	CTGCAG	1 cut(s)	95
PsuI	RGATCY	1 cut(s)	893
PsyI	GACNNNGTC	1 cut(s)	113
PvuII	CAGCTG	1 cut(s)	665
RsaI	GTAC	5 cut(s)	84, 242, 909, 1410, 1564
RsaNI	GTAC	5 cut(s)	83, 241, 908, 1409, 1563
RseI	CAYNNNNRTG	3 cut(s)	126, 608, 1304
SapI	GCTCTTC	2 cut(s)	851, 1548
SaqAI	TTAA	9 cut(s)	317, 384, 474, 531, 726, 798, 1026, 1335, 1386
SatI	GCNGC	8 cut(s)	94, 339, 663, 666, 669, 731, 951, 973
Sau3AI	GATC	6 cut(s)	703, 805, 893, 1006, 1170, 1323
Sau96I	GGNCC	2 cut(s)	629, 1349
SchI	GAGTC	1 cut(s)	36
ScrFI	CCNGG	1 cut(s)	958
SduI	GDGCHC	1 cut(s)	1227
SfaNI	GCATC	1 cut(s)	291
SfcI	CTRYAG	1 cut(s)	91
SfuI	TTCGAA	1 cut(s)	1249
SinI	GGWCC	2 cut(s)	629, 1349
SmiMI	CAYNNNNRTG	3 cut(s)	126, 608, 1304
SmlI	CTYRAG	4 cut(s)	473, 530, 828, 862
SmoI	CTYRAG	4 cut(s)	473, 530, 828, 862
SphI	GCATGC	1 cut(s)	1530
Sse9I	AATT	7 cut(s)	161, 448, 597, 656, 699, 903, 1056
SsiI	CCGC	7 cut(s)	96, 119, 184, 323, 338, 669, 1296
SspI	AATATT	3 cut(s)	216, 525, 1460
SspMI	CTAG	2 cut(s)	158, 935
StyD4I	CCNGG	1 cut(s)	956
TaaI	ACNGT	3 cut(s)	11, 796, 1413
TaiI	ACGT	5 cut(s)	84, 1230, 1410, 1564, 1568
TaqI	TCGA	2 cut(s)	222, 1249
TasI	AATT	7 cut(s)	161, 448, 597, 656, 699, 903, 1056
TatI	WGTACW	2 cut(s)	240, 907
TauI	GCSGC	2 cut(s)	341, 671
TfiI	GAWTC	7 cut(s)	224, 481, 497, 746, 1089, 1160, 1507
Tru1I	TTAA	9 cut(s)	317, 384, 474, 531, 726, 798, 1026, 1335, 1386
Tru9I	TTAA	9 cut(s)	317, 384, 474, 531, 726, 798, 1026, 1335, 1386
TscAI	CASTG	3 cut(s)	1016, 1283, 1418
TseFI	GTSAC	2 cut(s)	11, 1114
TseI	GCWGC	6 cut(s)	93, 662, 665, 730, 950, 972
Tsp45I	GTSAC	2 cut(s)	11, 1114
TspDTI	ATGAA	7 cut(s)	418, 663, 1065, 1377, 1520, 1538, 1566
TspGWI	ACGGA	2 cut(s)	377, 1082
TspRI	CASTG	3 cut(s)	1016, 1283, 1418
Tth111I	GACNNNGTC	1 cut(s)	113
Vha464I	CTTAAG	2 cut(s)	473, 530
VneI	GTGCAC	1 cut(s)	1223
VpaK11BI	GGWCC	2 cut(s)	629, 1349
XapI	RAATTY	1 cut(s)	1056
XceI	RCATGY	1 cut(s)	1530
XmnI	GAANNNNTTC	1 cut(s)	1245
XspI	CTAG	2 cut(s)	158, 935
Zsp2I	ATGCAT	1 cut(s)	694

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.