Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0001033

Physical Location & Seq

Genomic Coordinates Reverse (-)

19194625 .. 19196163

Gene Structure 1539 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG209500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGGCGCACGGTGATGATGAGAGACCGAGTCAAAAGCCCAAATTCTCTAATAACGATGATGGCAAAGCAACAGACTATAGGAAATTAGAATGGAAGCCTGAACACCCCAATCGGCCTCTGTGGATTTGTCCCGATGGTCGAGTACTCCTCGAAACTAACTCGGCTTTCTACGAACACGCTCAGGATTTTTTCATTGCCATTGCCGAACCAGTTCGCAGGGCAGAGTTGATCCACGAGTATAACTTGACCCCGGAGTCATTGTGTGCGGCTGCCTCAACTGGTGTCAAAACAGAAACCATTATTTCTGTCTTGAATAAGCTCTCGAAAACCGAGCTCACGAAACAACTCAATGATTTTTTTCAGTCTTCTACTTATAACAGCGGCAAAGCGAAGCTGGTCCTCAAGAACAATCGGTACTTTGTGGAATCCACATTCCCGGAGGTACTGAACACATTGCTTGAGGATAAACTTATATCTGAAGCAAAAATTAGTAGTATAACAAATAATGGCAAAGAATTCGAAATTGATCATAACAAGGTTGAAGACATCATGAAACGTTGCTCGCAAGATGGTTTGAACTATCCCATGGTGGAGGAGTACGACTATAGAAACGATAATGTAAACCCCAATGTTGGTATGGAACTAAAGCCCCAAGCATGCGTGACGATACGACCATATCAGCTTAAGAGCTTGAGCACAATGTTTGGGAATGGTAGAGCGAGATCTGGTATAATTGTACTACCTTGCGGCGCAGGAAAATCCCTAGTTAGTGTTTCTGCAACCTCCACAATAGGAAAGAGCTGCCTTTGTTTAGCAACGAATGGTGTTTCAGTTGATCAGTGGGTCTATCAGTTCAAGTTGTGGTCAACCATTCGAGATGAACAGCTTTGTCGTTTCAAATCTGACTGTAAAGAAGAAGCTGCAGAGATGTTAATCCACCGCAAAAGCAATGCTGCTGGGGTGGTGGTTGTGACTACATATAGCATGCTTGGCTGTGGTGGCAATAGGTCCCAACAGTCTACAAACATTATTGAGGAAATAAAAAATAGAAAATGGGGGTTGATTCTCATGGATGAGGTTCATGTAACTCCTGCTGAATCGTTTCAAAATGTCATCCGAATCACCAAATTACACTGCAAGCTTGGCCTCACGGTGACGCTCTTGAGAGAAGATGACAAGATATCATATCTCAACTTCCTCATTGGACCCAAATTATATGAAGCAAACTGGTTGGATTTGGCGAAACGAGGATACATTGCAAATGGGCTCTGTGCTGAAGTAAGGTGTCAGATGACAAAGGAGTTCTTTGCCGAGTATAAGAAAGAAAACTCCTACGAAAGAAAGCAAGCACTTTATTTGATGAATCCAAACAAGTTTAGGATATGCGAGTATCTTATACAGTTTCATGAGCAGCAGCGCCGTGGTGATAAGATCATAGTCTTTTCCGACAACCTCTTCACCCTCACTGAATATGCCACCAAGCTCCGAAAACCTATGATTTATGGTGCCACCACGCAGGCTGAGACGACAAAGTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0010224 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko03022 ko03420 map03022 map03420

Pfam Domains

Protein Families

ERCC3_RAD25_C Helicase_C_3 ResIII

Protein Analysis

512

Amino Acids

58.39

Weight (kDa)

8.24

Isoelectric Point (pI)

28.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Helicase_C_3	PF13625	40 - 165	1.1e-27	Helicase conserved C-terminal domain
ResIII	PF04851	222 - 387	8.2e-14	Type III restriction enzyme, res subunit
ERCC3_RAD25_C	PF16203	413 - 510	7.2e-38	ERCC3/RAD25/XPB C-terminal helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001033)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41360 AT5G41360 AT5G41370
fragaria_vesca	FvH4_5g02840 FvH4_5g02840 FvH4_5g02840 FvH4_5g02840 FvH4_5g02840 FvH4_5g19420 FvH4_5g19430 FvH4_7g08220 FvH4_7g08220
malus_domestica	MD06G1087900.v1.1
prunus_persica	Prupe.5G104000_v2.0.a1
pyrus_communis	pycom06g08400
rosa_chinensis	RchiOBHm_Chr1g0341611 RchiOBHm_Chr1g0341621 RchiOBHm_Chr1g0341861 RchiOBHm_Chr7g0197061 RchiOBHm_Chr7g0203931
rosa_laevigata	RLG00000003497 RLG00000003962 RLG00000029105 RLG00000029132
rosa_multiflora	Rmu_co8328521.1_g000001 Rmu_co8329503.1_g000001 Rmu_sc0002302.1_g000034 Rmu_sc0002322.1_g000070 Rmu_sc0003411.1_g000004 Rmu_sc0013871.1_g000001 Rmu_sc0032022.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258690 Rroxscaffold_4G00312270 Rroxscaffold_4G00312590
rosa_rugosa	Rorug01G0154800.1 Rorug07G0037400 Rorug07G0079500
rosa_samantha	Rh1AG168500 Rh1AG170500 Rh1BG136800 Rh1BG138300 Rh1BG138400 Rh1CG156100 Rh1CG158700 Rh1DG170300 Rh1DG170600 Rh1DG170700 Rh7AG162300 Rh7AG209400 Rh7AG209500 Rh7BG164400 Rh7BG208200 Rh7BG208300 Rh7CG170500 Rh7CG221900 Rh7DG163800 Rh7DG216500
rosa_wichuraiana	Rw1G014160 Rw1G014180 Rw7G014170 Rw7G018250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	375
AasI	GACNNNNNNGTC	1 cut(s)	253
AccB1I	GGYRCC	1 cut(s)	1505
AccI	GTMKAC	1 cut(s)	1019
AciI	CCGC	4 cut(s)	266, 381, 747, 940
AclI	AACGTT	1 cut(s)	556
AclWI	GGATC	1 cut(s)	223
AcsI	RAATTY	2 cut(s)	41, 515
AcuI	CTGAAG	2 cut(s)	498, 1296
AfaI	GTAC	5 cut(s)	144, 416, 444, 599, 738
AfiI	CCNNNNNNNGG	1 cut(s)	632
AflII	CTTAAG	1 cut(s)	683
AgsI	TTSAA	6 cut(s)	313, 542, 577, 856, 898, 1106
Alw21I	GWGCWC	2 cut(s)	336, 698
Alw26I	GTCTC	2 cut(s)	16, 1517
AlwI	GGATC	1 cut(s)	223
AoxI	GGCC	2 cut(s)	113, 1144
ApeKI	GCWGC	6 cut(s)	269, 801, 920, 953, 1411, 1414
ApoI	RAATTY	2 cut(s)	41, 515
Asp700I	GAANNNNTTC	2 cut(s)	210, 1101
AspLEI	GCGC	3 cut(s)	7, 752, 1419
AspS9I	GGNCC	3 cut(s)	397, 1008, 1205
AsuC2I	CCSGG	2 cut(s)	251, 437
AsuHPI	GGTGA	5 cut(s)	23, 1114, 1165, 1436, 1450
AsuII	TTCGAA	1 cut(s)	519
AvaII	GGWCC	3 cut(s)	397, 1008, 1205
BanI	GGYRCC	1 cut(s)	1505
BanII	GRGCYC	2 cut(s)	336, 1269
BauI	CACGAG	1 cut(s)	233
BbsI	GAAGAC	2 cut(s)	357, 549
Bbv12I	GWGCWC	2 cut(s)	336, 698
BbvI	GCAGC	6 cut(s)	256, 788, 907, 940, 1423, 1426
BccI	CCATC	3 cut(s)	53, 128, 563
BceAI	ACGGC	1 cut(s)	1404
BcgI	CGANNNNNNTGC	2 cut(s)	499, 533
BciVI	GTATCC	1 cut(s)	1244
BclI	TGATCA	2 cut(s)	526, 835
BcnI	CCSGG	2 cut(s)	251, 437
BcoDI	GTCTC	2 cut(s)	16, 1517
BfaI	CTAG	2 cut(s)	764, 1537
BfmI	CTRYAG	3 cut(s)	76, 604, 921
BfoI	RGCGCY	1 cut(s)	1420
BfrI	CTTAAG	1 cut(s)	683
BfuI	GTATCC	1 cut(s)	1244
BglII	AGATCT	1 cut(s)	722
BisI	GCNGC	9 cut(s)	267, 270, 382, 748, 802, 921, 954, 1412, 1415
BlsI	GCNGC	9 cut(s)	268, 271, 383, 749, 803, 922, 955, 1413, 1416
BmcAI	AGTACT	1 cut(s)	144
Bme1390I	CCNGG	2 cut(s)	251, 437
Bme18I	GGWCC	3 cut(s)	397, 1008, 1205
BmgT120I	GGNCC	3 cut(s)	397, 1008, 1205
BmiI	GGNNCC	3 cut(s)	1010, 1207, 1507
BmrFI	CCNGG	2 cut(s)	251, 437
BpiI	GAAGAC	2 cut(s)	357, 549
BplI	GAGNNNNNCTC	2 cut(s)	132, 164
Bpu10I	CCTNAGC	1 cut(s)	180
Bpu14I	TTCGAA	1 cut(s)	519
BpuEI	CTTGAG	4 cut(s)	386, 479, 712, 1183
BpuMI	CCSGG	2 cut(s)	251, 437
BsaBI	GATNNNNATC	1 cut(s)	932
BsaI	GGTCTC	1 cut(s)	16
BsaJI	CCNNGG	3 cut(s)	249, 585, 1420
BsaXI	ACNNNNNCTCC	2 cut(s)	245, 275
Bsc4I	CCNNNNNNNGG	1 cut(s)	632
Bse1I	ACTGG	3 cut(s)	209, 283, 1232
Bse3DI	GCAATG	5 cut(s)	192, 198, 452, 955, 1254
Bse8I	GATNNNNATC	1 cut(s)	932
BseDI	CCNNGG	3 cut(s)	249, 585, 1420
BseGI	GGATG	2 cut(s)	1078, 1113
BseJI	GATNNNNATC	1 cut(s)	932
BseLI	CCNNNNNNNGG	1 cut(s)	632
BseMI	GCAATG	5 cut(s)	192, 198, 452, 955, 1254
BseMII	CTCAG	2 cut(s)	194, 1512
BseNI	ACTGG	3 cut(s)	209, 283, 1232
BseRI	GAGGAG	2 cut(s)	137, 608
BseXI	GCAGC	6 cut(s)	256, 788, 907, 940, 1423, 1426
BseYI	CCCAGC	1 cut(s)	956
BshFI	GGCC	2 cut(s)	115, 1146
BshNI	GGYRCC	1 cut(s)	1505
BsiHKAI	GWGCWC	2 cut(s)	336, 698
BsiSI	CCGG	2 cut(s)	251, 437
BslFI	GGGAC	2 cut(s)	114, 994
BslI	CCNNNNNNNGG	1 cut(s)	632
BsmAI	GTCTC	2 cut(s)	16, 1517
BsmBI	CGTCTC	1 cut(s)	1517
BsmFI	GGGAC	2 cut(s)	114, 994
BsnI	GGCC	2 cut(s)	115, 1146
Bso31I	GGTCTC	1 cut(s)	16
Bsp119I	TTCGAA	1 cut(s)	519
Bsp1286I	GDGCHC	3 cut(s)	336, 698, 1269
Bsp143I	GATC	5 cut(s)	228, 526, 722, 835, 1431
Bsp19I	CCATGG	1 cut(s)	585
BspACI	CCGC	4 cut(s)	266, 381, 747, 940
BspANI	GGCC	2 cut(s)	115, 1146
BspCNI	CTCAG	2 cut(s)	193, 1513
BspHI	TCATGA	2 cut(s)	549, 1405
BspLI	GGNNCC	3 cut(s)	1010, 1207, 1507
BspMAI	CTGCAG	1 cut(s)	925
BspPI	GGATC	1 cut(s)	223
BspT104I	TTCGAA	1 cut(s)	519
BspT107I	GGYRCC	1 cut(s)	1505
BspTI	CTTAAG	1 cut(s)	683
BspTNI	GGTCTC	1 cut(s)	16
BsrDI	GCAATG	5 cut(s)	192, 198, 452, 955, 1254
BsrI	ACTGG	3 cut(s)	209, 283, 1232
BssECI	CCNNGG	3 cut(s)	249, 585, 1420
BssMI	GATC	5 cut(s)	228, 526, 722, 835, 1431
BssSI	CACGAG	1 cut(s)	233
BssT1I	CCWWGG	1 cut(s)	585
Bst2BI	CACGAG	1 cut(s)	233
Bst4CI	ACNGT	5 cut(s)	11, 908, 1017, 1153, 1401
Bst6I	CTCTTC	1 cut(s)	1460
BstAFI	CTTAAG	1 cut(s)	683
BstBI	TTCGAA	1 cut(s)	519
BstC8I	GCNNGC	6 cut(s)	563, 658, 986, 1139, 1347, 1518
BstDEI	CTNAG	2 cut(s)	180, 1521
BstDSI	CCRYGG	2 cut(s)	585, 1420
BstF5I	GGATG	2 cut(s)	1078, 1113
BstH2I	RGCGCY	1 cut(s)	1420
BstHHI	GCGC	3 cut(s)	7, 752, 1419
BstKTI	GATC	5 cut(s)	231, 529, 725, 838, 1434
BstMAI	GTCTC	2 cut(s)	16, 1517
BstMBI	GATC	5 cut(s)	228, 526, 722, 835, 1431
BstMWI	GCNNNNNNNGC	3 cut(s)	990, 999, 1143
BstNSI	RCATGY	2 cut(s)	660, 988
BstSCI	CCNGG	2 cut(s)	249, 435
BstSFI	CTRYAG	3 cut(s)	76, 604, 921
BstV1I	GCAGC	6 cut(s)	256, 788, 907, 940, 1423, 1426
BstV2I	GAAGAC	2 cut(s)	357, 549
BstX2I	RGATCY	1 cut(s)	722
BstYI	RGATCY	1 cut(s)	722
BsuI	GTATCC	1 cut(s)	1244
BsuRI	GGCC	2 cut(s)	115, 1146
BtgI	CCRYGG	2 cut(s)	585, 1420
BtsCI	GGATG	2 cut(s)	1078, 1113
BtsI	GCAGTG	1 cut(s)	1132
BtsIMutI	CAGTG	3 cut(s)	845, 1132, 1464
Cac8I	GCNNGC	6 cut(s)	563, 658, 986, 1139, 1347, 1518
CciI	TCATGA	2 cut(s)	549, 1405
CfoI	GCGC	3 cut(s)	7, 752, 1419
Cfr13I	GGNCC	3 cut(s)	397, 1008, 1205
CseI	GACGC	1 cut(s)	1165
Csp6I	GTAC	5 cut(s)	143, 415, 443, 598, 737
CviAII	CATG	7 cut(s)	550, 586, 657, 985, 1069, 1082, 1406
CviQI	GTAC	5 cut(s)	143, 415, 443, 598, 737
DdeI	CTNAG	2 cut(s)	180, 1521
DpnI	GATC	5 cut(s)	230, 528, 724, 837, 1433
DpnII	GATC	5 cut(s)	228, 526, 722, 835, 1431
DrdI	GACNNNNNNGTC	1 cut(s)	253
DseDI	GACNNNNNNGTC	1 cut(s)	253
Eam1104I	CTCTTC	1 cut(s)	1460
EarI	CTCTTC	1 cut(s)	1460
Ecl136II	GAGCTC	1 cut(s)	334
Eco130I	CCWWGG	1 cut(s)	585
Eco24I	GRGCYC	2 cut(s)	336, 1269
Eco31I	GGTCTC	1 cut(s)	16
Eco32I	GATATC	1 cut(s)	1182
Eco47I	GGWCC	3 cut(s)	397, 1008, 1205
Eco53kI	GAGCTC	1 cut(s)	334
Eco57I	CTGAAG	2 cut(s)	498, 1296
EcoICRI	GAGCTC	1 cut(s)	334
EcoO109I	RGGNCCY	1 cut(s)	1008
EcoRI	GAATTC	1 cut(s)	515
EcoRV	GATATC	1 cut(s)	1182
EcoT14I	CCWWGG	1 cut(s)	585
EcoT38I	GRGCYC	2 cut(s)	336, 1269
ErhI	CCWWGG	1 cut(s)	585
Esp3I	CGTCTC	1 cut(s)	1517
FaeI	CATG	7 cut(s)	553, 589, 660, 988, 1072, 1085, 1409
FalI	AAGNNNNNCTT	2 cut(s)	1289, 1321
FaqI	GGGAC	2 cut(s)	114, 994
FatI	CATG	7 cut(s)	549, 585, 656, 984, 1068, 1081, 1405
FbaI	TGATCA	2 cut(s)	526, 835
FblI	GTMKAC	1 cut(s)	1019
Fnu4HI	GCNGC	9 cut(s)	267, 270, 382, 748, 802, 921, 954, 1412, 1415
FokI	GGATG	2 cut(s)	1085, 1100
FriOI	GRGCYC	2 cut(s)	336, 1269
Fsp4HI	GCNGC	9 cut(s)	267, 270, 382, 748, 802, 921, 954, 1412, 1415
FspBI	CTAG	2 cut(s)	764, 1537
GlaI	GCGC	3 cut(s)	6, 751, 1418
GluI	GCNGC	9 cut(s)	267, 270, 382, 748, 802, 921, 954, 1412, 1415
GsaI	CCCAGC	1 cut(s)	960
HaeII	RGCGCY	1 cut(s)	1420
HaeIII	GGCC	2 cut(s)	115, 1146
HapII	CCGG	2 cut(s)	251, 437
HgaI	GACGC	1 cut(s)	1165
HhaI	GCGC	3 cut(s)	7, 752, 1419
Hin1II	CATG	7 cut(s)	553, 589, 660, 988, 1072, 1085, 1409
Hin6I	GCGC	3 cut(s)	5, 750, 1417
HinP1I	GCGC	3 cut(s)	5, 750, 1417
HincII	GTYRAC	1 cut(s)	867
HindII	GTYRAC	1 cut(s)	867
HindIII	AAGCTT	1 cut(s)	1139
HinfI	GANTC	7 cut(s)	28, 254, 425, 1063, 1097, 1119, 1363
HpaII	CCGG	2 cut(s)	251, 437
HphI	GGTGA	5 cut(s)	23, 1114, 1165, 1436, 1450
Hpy166II	GTNNAC	3 cut(s)	622, 867, 1020
Hpy188I	TCNGA	6 cut(s)	478, 904, 1118, 1290, 1447, 1487
Hpy8I	GTNNAC	3 cut(s)	622, 867, 1020
HpyCH4III	ACNGT	5 cut(s)	11, 908, 1017, 1153, 1401
HpyCH4IV	ACGT	1 cut(s)	556
HpyCH4V	TGCA	4 cut(s)	779, 923, 1137, 1259
HpyF10VI	GCNNNNNNNGC	3 cut(s)	990, 999, 1143
HpyF3I	CTNAG	2 cut(s)	180, 1521
HpySE526I	ACGT	1 cut(s)	556
Hsp92II	CATG	7 cut(s)	553, 589, 660, 988, 1072, 1085, 1409
HspAI	GCGC	3 cut(s)	5, 750, 1417
Ksp22I	TGATCA	2 cut(s)	526, 835
Kzo9I	GATC	5 cut(s)	228, 526, 722, 835, 1431
LmnI	GCTCC	1 cut(s)	1488
Lsp1109I	GCAGC	6 cut(s)	256, 788, 907, 940, 1423, 1426
MaeI	CTAG	2 cut(s)	764, 1537
MaeII	ACGT	1 cut(s)	556
MaeIII	GTNAC	4 cut(s)	661, 970, 1084, 1153
MalI	GATC	5 cut(s)	230, 528, 724, 837, 1433
MboI	GATC	5 cut(s)	228, 526, 722, 835, 1431
MboII	GAAGA	5 cut(s)	357, 554, 926, 1181, 1447
MflI	RGATCY	1 cut(s)	722
MhlI	GDGCHC	3 cut(s)	336, 698, 1269
MluCI	AATT	8 cut(s)	41, 83, 486, 515, 522, 732, 1127, 1211
MlyI	GAGTC	2 cut(s)	37, 263
MmeI	TCCRAC	2 cut(s)	1212, 1470
MroXI	GAANNNNTTC	2 cut(s)	210, 1101
MseI	TTAA	2 cut(s)	684, 932
MslI	CAYNNNNRTG	1 cut(s)	12
MspA1I	CMGCKG	1 cut(s)	381
MspCI	CTTAAG	1 cut(s)	683
MspI	CCGG	2 cut(s)	251, 437
MspR9I	CCNGG	2 cut(s)	251, 437
MwoI	GCNNNNNNNGC	3 cut(s)	990, 999, 1143
NciI	CCSGG	2 cut(s)	251, 437
NcoI	CCATGG	1 cut(s)	585
NdeII	GATC	5 cut(s)	228, 526, 722, 835, 1431
NlaIII	CATG	7 cut(s)	553, 589, 660, 988, 1072, 1085, 1409
NlaIV	GGNNCC	3 cut(s)	1010, 1207, 1507
NmeAIII	GCCGAG	2 cut(s)	140, 1336
NmuCI	GTSAC	3 cut(s)	661, 970, 1153
NspI	RCATGY	2 cut(s)	660, 988
NspV	TTCGAA	1 cut(s)	519
PaeI	GCATGC	2 cut(s)	660, 988
PagI	TCATGA	2 cut(s)	549, 1405
PdmI	GAANNNNTTC	2 cut(s)	210, 1101
PfeI	GAWTC	5 cut(s)	425, 1063, 1097, 1119, 1363
PflFI	GACNNNGTC	1 cut(s)	27
PfoI	TCCNGGA	1 cut(s)	435
PkrI	GCNGC	9 cut(s)	268, 271, 383, 749, 803, 922, 955, 1413, 1416
PleI	GAGTC	2 cut(s)	36, 262
PpsI	GAGTC	2 cut(s)	36, 262
PpuMI	RGGWCCY	1 cut(s)	1008
PsiI	TTATAA	1 cut(s)	375
Psp124BI	GAGCTC	1 cut(s)	336
Psp1406I	AACGTT	1 cut(s)	556
Psp5II	RGGWCCY	1 cut(s)	1008
PspFI	CCCAGC	1 cut(s)	956
PspN4I	GGNNCC	3 cut(s)	1010, 1207, 1507
PspPI	GGNCC	3 cut(s)	397, 1008, 1205
PspPPI	RGGWCCY	1 cut(s)	1008
PsrI	GAACNNNNNNTAC	2 cut(s)	398, 430
PstI	CTGCAG	1 cut(s)	925
PsuI	RGATCY	1 cut(s)	722
PsyI	GACNNNGTC	1 cut(s)	27
RsaI	GTAC	5 cut(s)	144, 416, 444, 599, 738
RsaNI	GTAC	5 cut(s)	143, 415, 443, 598, 737
RseI	CAYNNNNRTG	1 cut(s)	12
SacI	GAGCTC	1 cut(s)	336
SaqAI	TTAA	2 cut(s)	684, 932
SatI	GCNGC	9 cut(s)	267, 270, 382, 748, 802, 921, 954, 1412, 1415
Sau3AI	GATC	5 cut(s)	228, 526, 722, 835, 1431
Sau96I	GGNCC	3 cut(s)	397, 1008, 1205
ScaI	AGTACT	1 cut(s)	144
SchI	GAGTC	2 cut(s)	37, 263
ScrFI	CCNGG	2 cut(s)	251, 437
SduI	GDGCHC	3 cut(s)	336, 698, 1269
SfcI	CTRYAG	3 cut(s)	76, 604, 921
SfuI	TTCGAA	1 cut(s)	519
SinI	GGWCC	3 cut(s)	397, 1008, 1205
SmiMI	CAYNNNNRTG	1 cut(s)	12
SmlI	CTYRAG	5 cut(s)	401, 458, 683, 691, 1162
SmoI	CTYRAG	5 cut(s)	401, 458, 683, 691, 1162
SphI	GCATGC	2 cut(s)	660, 988
Sse9I	AATT	8 cut(s)	41, 83, 486, 515, 522, 732, 1127, 1211
SsiI	CCGC	4 cut(s)	266, 381, 747, 940
SspMI	CTAG	2 cut(s)	764, 1537
SstI	GAGCTC	1 cut(s)	336
StyD4I	CCNGG	2 cut(s)	249, 435
StyI	CCWWGG	1 cut(s)	585
TaaI	ACNGT	5 cut(s)	11, 908, 1017, 1153, 1401
TaiI	ACGT	1 cut(s)	559
TaqI	TCGA	5 cut(s)	139, 150, 323, 519, 874
TaqII	GACCGA	1 cut(s)	40
TasI	AATT	8 cut(s)	41, 83, 486, 515, 522, 732, 1127, 1211
TatI	WGTACW	2 cut(s)	142, 736
TauI	GCSGC	3 cut(s)	269, 384, 750
TfiI	GAWTC	5 cut(s)	425, 1063, 1097, 1119, 1363
Tru1I	TTAA	2 cut(s)	684, 932
Tru9I	TTAA	2 cut(s)	684, 932
TscAI	CASTG	3 cut(s)	845, 1139, 1471
TseFI	GTSAC	3 cut(s)	661, 970, 1153
TseI	GCWGC	6 cut(s)	269, 801, 920, 953, 1411, 1414
Tsp45I	GTSAC	3 cut(s)	661, 970, 1153
TspDTI	ATGAA	7 cut(s)	181, 566, 894, 1070, 1233, 1376, 1394
TspRI	CASTG	3 cut(s)	845, 1139, 1471
Tth111I	GACNNNGTC	1 cut(s)	27
Vha464I	CTTAAG	1 cut(s)	683
VpaK11BI	GGWCC	3 cut(s)	397, 1008, 1205
XapI	RAATTY	2 cut(s)	41, 515
XceI	RCATGY	2 cut(s)	660, 988
XcmI	CCANNNNNNNNNTGG	1 cut(s)	634
XmiI	GTMKAC	1 cut(s)	1019
XmnI	GAANNNNTTC	2 cut(s)	210, 1101
XspI	CTAG	2 cut(s)	764, 1537
ZrmI	AGTACT	1 cut(s)	144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.