Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0032022.1

Orthogroup ID

OG0001033

Physical Location & Seq

Genomic Coordinates Forward (+)

254 .. 2972

Gene Structure 2719 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0032022.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

atggaggtggagaccaccaagcatcacaacaccactggtccgacgatgtccacaaactttggtggcttgccagtactgctgcaatcatcaggtgtgaagttaagcgaacagatccaagtcgagactccaacggttcagtgtgaagatgcggttaaggaaaaagagaaaagtcggatgaagatgagagggacaaaatcaatggcgcacggtgattatgagagaccgagtcaaaagcccaaattctctaataacgatgatggcaaggcaacagactatagcaaattagaatggaagcctgaacaccccaatcggcctctgtggatttgtcccgatggtcgagtactcctggaaactaactcggctttctacgaacacgctcaggattttctcattgccattgccgaaccagttcgcagggcagagttgatccacgagtataacttgaccccggagtcattgtgtgcggctgcctcaactggtgtcaaaacagaaaccattatttctgtcttgaataagctctcgaaaaccgagctcacgaaacaactcaatgattttattcagtcttctactgataacagcggcaaagcgaagctggtcctcaagaacaatcggtactttgtggaatccacattcccggaggtactgaacacattgcttgaggataaacttatatctgaagcaaaaattagtagtataacaaataatggcaaagaattcgaaattgatcataacaaggttgaagacatcatgaaacgttgctcgcaagatggtttgaactatcccatggtggaggagtacgactatagaaacgataatgtaaaccccaatgttggtatggaactaaagccccaagcacgcgtgacgatacgaccatatcagcttaagagcttgagcacaatgtttgggaatggtagagcgagatctggtataattgtactaccttgcggcgcaggaaaatccctagttggtgtttctgcagcctccacaataggaaagagctgcctttgtttagcaacgaatggtgttgcagttgatcagtgggtctatcagttcaagttgtggtcaaccattcgagatgagcagatttgtcgtttcaaatctgactgtaaagaagaagctgcagagatgttaatccgccgcaaaagcaatgctgctggggtggtggttgtgactacatatagcatgcttggctgtggtggcaataggtcccaacagtctaaaaacattattgaggaaataaaaaatagaaaatgggggttgattctcatggatgaggttcatgtaactcctgctgaatcgtttcaaaatgtcatccgaatcaccaaatcacactgcaagcttggcctcacggcgacgctcttgagagaagatgacaagatatcagatctcaacttcctcattggacccaaattatatgaagcaaactggttggatttggcgaaacgaggatacattgcaaatgtgctctgtgctgaagtaaggtgtcagatgacaaaggagttctttgccgagtataagaaagaaaactcctgcgaaagaaagcaagcactttatttgatgaatccaaacaagtttaggatatgcgagtatcttatacagtttcatgagcagcagcgccgtggtgataagatcatagtcttttccgacaacctcttcaccctcactgaatatgccaccaagctccgaaaacctatgatttatggtgccaccacgcaggctgagacgacaaaagttctagaagagttcaaaacaaacccggatgtaaacaccgtattcatgtctaaggtgggtgataactccttggacattcccgaggcaaatgtgatcattgagatttcatggcacggcggttcgagacgacaagaagcgcagcgtcttggtcggattctaagggccaagaaaagtaaagagaagtacaatgcattcttctattcccttgtgtcatcggatacacgggagatggaatttgcagctaaaaggcagcagtttttggtcgatcaaggttatagttataagattgttacaatcttgcaattgcctaattttcctccacttggatcaggagctttgagctatgacagtcttcaagatcaacgcacactactcaagaaagtgttgagctttaatgaggctatagttggggccgaagatccactagtagaagatgtagatggcatgcattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0010224 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko03022 ko03420 map03022 map03420

Pfam Domains

Protein Families

ERCC3_RAD25_C Helicase_C_3 ResIII

Protein Analysis

727

Amino Acids

82.2

Weight (kDa)

8.01

Isoelectric Point (pI)

34.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001033)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41360 AT5G41360 AT5G41370
fragaria_vesca	FvH4_5g02840 FvH4_5g02840 FvH4_5g02840 FvH4_5g02840 FvH4_5g02840 FvH4_5g19420 FvH4_5g19430 FvH4_7g08220 FvH4_7g08220
malus_domestica	MD06G1087900.v1.1
prunus_persica	Prupe.5G104000_v2.0.a1
pyrus_communis	pycom06g08400
rosa_chinensis	RchiOBHm_Chr1g0341611 RchiOBHm_Chr1g0341621 RchiOBHm_Chr1g0341861 RchiOBHm_Chr7g0197061 RchiOBHm_Chr7g0203931
rosa_laevigata	RLG00000003497 RLG00000003962 RLG00000029105 RLG00000029132
rosa_multiflora	Rmu_co8328521.1_g000001 Rmu_co8329503.1_g000001 Rmu_sc0002302.1_g000034 Rmu_sc0002322.1_g000070 Rmu_sc0003411.1_g000004 Rmu_sc0013871.1_g000001 Rmu_sc0032022.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258690 Rroxscaffold_4G00312270 Rroxscaffold_4G00312590
rosa_rugosa	Rorug01G0154800.1 Rorug07G0037400 Rorug07G0079500
rosa_samantha	Rh1AG168500 Rh1AG170500 Rh1BG136800 Rh1BG138300 Rh1BG138400 Rh1CG156100 Rh1CG158700 Rh1DG170300 Rh1DG170600 Rh1DG170700 Rh7AG162300 Rh7AG209400 Rh7AG209500 Rh7BG164400 Rh7BG208200 Rh7BG208300 Rh7CG170500 Rh7CG221900 Rh7DG163800 Rh7DG216500
rosa_wichuraiana	Rw1G014160 Rw1G014180 Rw7G014170 Rw7G018250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2013
AasI	GACNNNNNNGTC	1 cut(s)	451
AccB1I	GGYRCC	1 cut(s)	1703
AccII	CGCG	1 cut(s)	858
AciI	CCGC	7 cut(s)	149, 464, 579, 945, 1135, 1138, 1848
AclI	AACGTT	1 cut(s)	754
AclWI	GGATC	4 cut(s)	106, 421, 2065, 2144
AcsI	RAATTY	3 cut(s)	239, 713, 1964
AcuI	CTGAAG	2 cut(s)	696, 1494
AfaI	GTAC	7 cut(s)	75, 342, 614, 642, 797, 936, 1916
AfiI	CCNNNNNNNGG	2 cut(s)	830, 2054
AflII	CTTAAG	1 cut(s)	881
AflIII	ACRYGT	1 cut(s)	856
AgsI	TTSAA	8 cut(s)	511, 740, 775, 1054, 1096, 1304, 1747, 2087
AhlI	ACTAGT	1 cut(s)	2155
AjnI	CCWGG	1 cut(s)	345
Alw21I	GWGCWC	3 cut(s)	534, 896, 1467
Alw26I	GTCTC	5 cut(s)	5, 116, 214, 1715, 1849
AlwI	GGATC	4 cut(s)	106, 421, 2065, 2144
Ama87I	CYCGRG	1 cut(s)	1811
AoxI	GGCC	4 cut(s)	311, 1342, 1893, 2142
ApoI	RAATTY	3 cut(s)	239, 713, 1964
Asp700I	GAANNNNTTC	2 cut(s)	408, 1299
AspLEI	GCGC	4 cut(s)	205, 950, 1617, 1870
AspS9I	GGNCC	6 cut(s)	38, 595, 1206, 1403, 1893, 2142
AsuC2I	CCSGG	3 cut(s)	449, 635, 1757
AsuHPI	GGTGA	5 cut(s)	221, 1312, 1634, 1648, 1802
AsuII	TTCGAA	1 cut(s)	717
AvaI	CYCGRG	1 cut(s)	1811
AvaII	GGWCC	4 cut(s)	38, 595, 1206, 1403
BanI	GGYRCC	1 cut(s)	1703
BanII	GRGCYC	1 cut(s)	534
BauI	CACGAG	1 cut(s)	431
BbsI	GAAGAC	3 cut(s)	555, 747, 2075
Bbv12I	GWGCWC	3 cut(s)	534, 896, 1467
BccI	CCATC	5 cut(s)	251, 326, 761, 1954, 2165
BceAI	ACGGC	3 cut(s)	1365, 1602, 1861
BcgI	CGANNNNNNTGC	4 cut(s)	697, 731, 1070, 1104
BciT130I	CCWGG	1 cut(s)	347
BciVI	GTATCC	2 cut(s)	1442, 1942
BclI	TGATCA	3 cut(s)	724, 1033, 1824
BcnI	CCSGG	3 cut(s)	449, 635, 1757
BcoDI	GTCTC	5 cut(s)	5, 116, 214, 1715, 1849
BcuI	ACTAGT	1 cut(s)	2155
BfaI	CTAG	3 cut(s)	962, 1736, 2156
BfmI	CTRYAG	5 cut(s)	274, 802, 975, 1119, 2133
BfoI	RGCGCY	1 cut(s)	1618
BfrI	CTTAAG	1 cut(s)	881
BfuI	GTATCC	2 cut(s)	1442, 1942
BglII	AGATCT	2 cut(s)	920, 1384
BmcAI	AGTACT	2 cut(s)	75, 342
Bme1390I	CCNGG	4 cut(s)	347, 449, 635, 1757
Bme18I	GGWCC	4 cut(s)	38, 595, 1206, 1403
BmeT110I	CYCGRG	1 cut(s)	1811
BmgT120I	GGNCC	6 cut(s)	38, 595, 1206, 1403, 1893, 2142
BmiI	GGNNCC	4 cut(s)	1208, 1405, 1705, 2143
BmrFI	CCNGG	4 cut(s)	347, 449, 635, 1757
BmsI	GCATC	2 cut(s)	31, 136
BpiI	GAAGAC	3 cut(s)	555, 747, 2075
Bpu10I	CCTNAGC	1 cut(s)	378
Bpu14I	TTCGAA	1 cut(s)	717
BpuEI	CTTGAG	5 cut(s)	584, 677, 910, 1381, 2090
BpuMI	CCSGG	3 cut(s)	449, 635, 1757
BsaBI	GATNNNNATC	1 cut(s)	1130
BsaI	GGTCTC	2 cut(s)	5, 214
BsaJI	CCNNGG	5 cut(s)	447, 783, 1618, 1800, 1812
BsaXI	ACNNNNNCTCC	2 cut(s)	443, 473
Bsc4I	CCNNNNNNNGG	2 cut(s)	830, 2054
Bse1I	ACTGG	5 cut(s)	40, 71, 407, 481, 1430
Bse3DI	GCAATG	5 cut(s)	390, 396, 650, 1153, 1452
Bse8I	GATNNNNATC	1 cut(s)	1130
BseBI	CCWGG	1 cut(s)	347
BseDI	CCNNGG	5 cut(s)	447, 783, 1618, 1800, 1812
BseGI	GGATG	4 cut(s)	180, 1276, 1311, 1765
BseJI	GATNNNNATC	1 cut(s)	1130
BseLI	CCNNNNNNNGG	2 cut(s)	830, 2054
BseMI	GCAATG	5 cut(s)	390, 396, 650, 1153, 1452
BseMII	CTCAG	2 cut(s)	392, 1710
BseNI	ACTGG	5 cut(s)	40, 71, 407, 481, 1430
BseRI	GAGGAG	1 cut(s)	806
BseYI	CCCAGC	1 cut(s)	1154
Bsh1236I	CGCG	1 cut(s)	858
BshFI	GGCC	4 cut(s)	313, 1344, 1895, 2144
BshNI	GGYRCC	1 cut(s)	1703
BsiHKAI	GWGCWC	3 cut(s)	534, 896, 1467
BsiHKCI	CYCGRG	1 cut(s)	1811
BsiSI	CCGG	3 cut(s)	449, 635, 1757
BslFI	GGGAC	3 cut(s)	202, 312, 1192
BslI	CCNNNNNNNGG	2 cut(s)	830, 2054
BsmAI	GTCTC	5 cut(s)	5, 116, 214, 1715, 1849
BsmBI	CGTCTC	2 cut(s)	1715, 1849
BsmFI	GGGAC	3 cut(s)	202, 312, 1192
BsmI	GAATGC	1 cut(s)	1922
BsnI	GGCC	4 cut(s)	313, 1344, 1895, 2144
Bso31I	GGTCTC	2 cut(s)	5, 214
BsoBI	CYCGRG	1 cut(s)	1811
Bsp119I	TTCGAA	1 cut(s)	717
Bsp1286I	GDGCHC	3 cut(s)	534, 896, 1467
Bsp19I	CCATGG	1 cut(s)	783
BspACI	CCGC	7 cut(s)	149, 464, 579, 945, 1135, 1138, 1848
BspANI	GGCC	4 cut(s)	313, 1344, 1895, 2144
BspCNI	CTCAG	2 cut(s)	391, 1711
BspFNI	CGCG	1 cut(s)	858
BspHI	TCATGA	2 cut(s)	747, 1603
BspLI	GGNNCC	4 cut(s)	1208, 1405, 1705, 2143
BspMAI	CTGCAG	2 cut(s)	979, 1123
BspPI	GGATC	4 cut(s)	106, 421, 2065, 2144
BspT104I	TTCGAA	1 cut(s)	717
BspT107I	GGYRCC	1 cut(s)	1703
BspTI	CTTAAG	1 cut(s)	881
BspTNI	GGTCTC	2 cut(s)	5, 214
BsrDI	GCAATG	5 cut(s)	390, 396, 650, 1153, 1452
BsrI	ACTGG	5 cut(s)	40, 71, 407, 481, 1430
BssECI	CCNNGG	5 cut(s)	447, 783, 1618, 1800, 1812
BssSI	CACGAG	1 cut(s)	431
BssT1I	CCWWGG	2 cut(s)	783, 1800
Bst2BI	CACGAG	1 cut(s)	431
Bst2UI	CCWGG	1 cut(s)	347
Bst4CI	ACNGT	7 cut(s)	133, 209, 1106, 1215, 1599, 1771, 2081
Bst6I	CTCTTC	2 cut(s)	1658, 1734
BstAFI	CTTAAG	1 cut(s)	881
BstBI	TTCGAA	1 cut(s)	717
BstC8I	GCNNGC	8 cut(s)	68, 761, 856, 1184, 1337, 1545, 1716, 2177
BstDEI	CTNAG	4 cut(s)	378, 1719, 1782, 1889
BstDSI	CCRYGG	2 cut(s)	783, 1618
BstF5I	GGATG	4 cut(s)	180, 1276, 1311, 1765
BstFNI	CGCG	1 cut(s)	858
BstH2I	RGCGCY	1 cut(s)	1618
BstHHI	GCGC	4 cut(s)	205, 950, 1617, 1870
BstMAI	GTCTC	5 cut(s)	5, 116, 214, 1715, 1849
BstMWI	GCNNNNNNNGC	5 cut(s)	76, 1143, 1188, 1197, 1341
BstNI	CCWGG	1 cut(s)	347
BstNSI	RCATGY	2 cut(s)	1186, 2179
BstSCI	CCNGG	4 cut(s)	345, 447, 633, 1755
BstSFI	CTRYAG	5 cut(s)	274, 802, 975, 1119, 2133
BstUI	CGCG	1 cut(s)	858
BstV2I	GAAGAC	3 cut(s)	555, 747, 2075
BstX2I	RGATCY	4 cut(s)	111, 920, 1384, 2149
BstYI	RGATCY	4 cut(s)	111, 920, 1384, 2149
BsuI	GTATCC	2 cut(s)	1442, 1942
BsuRI	GGCC	4 cut(s)	313, 1344, 1895, 2144
BtgI	CCRYGG	2 cut(s)	783, 1618
BtsCI	GGATG	4 cut(s)	180, 1276, 1311, 1765
BtsI	GCAGTG	1 cut(s)	1330
BtsIMutI	CAGTG	5 cut(s)	33, 143, 1043, 1330, 1662
Cac8I	GCNNGC	8 cut(s)	68, 761, 856, 1184, 1337, 1545, 1716, 2177
CciI	TCATGA	2 cut(s)	747, 1603
CfoI	GCGC	4 cut(s)	205, 950, 1617, 1870
Cfr13I	GGNCC	6 cut(s)	38, 595, 1206, 1403, 1893, 2142
CseI	GACGC	2 cut(s)	1363, 1862
Csp6I	GTAC	7 cut(s)	74, 341, 613, 641, 796, 935, 1915
CspCI	CAANNNNNGTGG	2 cut(s)	40, 75
CviAII	CATG	9 cut(s)	748, 784, 1183, 1267, 1280, 1604, 1777, 1839, 2176
CviQI	GTAC	7 cut(s)	74, 341, 613, 641, 796, 935, 1915
DdeI	CTNAG	4 cut(s)	378, 1719, 1782, 1889
DrdI	GACNNNNNNGTC	1 cut(s)	451
DseDI	GACNNNNNNGTC	1 cut(s)	451
Eam1104I	CTCTTC	2 cut(s)	1658, 1734
EarI	CTCTTC	2 cut(s)	1658, 1734
EciI	GGCGGA	1 cut(s)	1124
Ecl136II	GAGCTC	1 cut(s)	532
Eco130I	CCWWGG	2 cut(s)	783, 1800
Eco24I	GRGCYC	1 cut(s)	534
Eco31I	GGTCTC	2 cut(s)	5, 214
Eco32I	GATATC	1 cut(s)	1380
Eco47I	GGWCC	4 cut(s)	38, 595, 1206, 1403
Eco53kI	GAGCTC	1 cut(s)	532
Eco57I	CTGAAG	2 cut(s)	696, 1494
Eco88I	CYCGRG	1 cut(s)	1811
EcoICRI	GAGCTC	1 cut(s)	532
EcoO109I	RGGNCCY	1 cut(s)	1206
EcoRI	GAATTC	1 cut(s)	713
EcoRII	CCWGG	1 cut(s)	345
EcoRV	GATATC	1 cut(s)	1380
EcoT14I	CCWWGG	2 cut(s)	783, 1800
EcoT22I	ATGCAT	2 cut(s)	1924, 2181
EcoT38I	GRGCYC	1 cut(s)	534
ErhI	CCWWGG	2 cut(s)	783, 1800
Esp3I	CGTCTC	2 cut(s)	1715, 1849
FaeI	CATG	9 cut(s)	751, 787, 1186, 1270, 1283, 1607, 1780, 1842, 2179
FalI	AAGNNNNNCTT	2 cut(s)	1487, 1519
FaqI	GGGAC	3 cut(s)	202, 312, 1192
FatI	CATG	9 cut(s)	747, 783, 1182, 1266, 1279, 1603, 1776, 1838, 2175
FbaI	TGATCA	3 cut(s)	724, 1033, 1824
FokI	GGATG	4 cut(s)	187, 1283, 1298, 1772
FriOI	GRGCYC	1 cut(s)	534
FspBI	CTAG	3 cut(s)	962, 1736, 2156
GlaI	GCGC	4 cut(s)	204, 949, 1616, 1869
GsaI	CCCAGC	1 cut(s)	1158
HaeII	RGCGCY	1 cut(s)	1618
HaeIII	GGCC	4 cut(s)	313, 1344, 1895, 2144
HapII	CCGG	3 cut(s)	449, 635, 1757
HgaI	GACGC	2 cut(s)	1363, 1862
HhaI	GCGC	4 cut(s)	205, 950, 1617, 1870
Hin1II	CATG	9 cut(s)	751, 787, 1186, 1270, 1283, 1607, 1780, 1842, 2179
Hin6I	GCGC	4 cut(s)	203, 948, 1615, 1868
HinP1I	GCGC	4 cut(s)	203, 948, 1615, 1868
HincII	GTYRAC	1 cut(s)	1065
HindII	GTYRAC	1 cut(s)	1065
HindIII	AAGCTT	1 cut(s)	1337
HinfI	GANTC	9 cut(s)	124, 226, 452, 623, 1261, 1295, 1317, 1561, 1885
HpaII	CCGG	3 cut(s)	449, 635, 1757
HphI	GGTGA	5 cut(s)	221, 1312, 1634, 1648, 1802
Hpy166II	GTNNAC	4 cut(s)	51, 820, 1065, 1765
Hpy8I	GTNNAC	4 cut(s)	51, 820, 1065, 1765
Hpy99I	CGWCG	2 cut(s)	46, 1357
HpyCH4III	ACNGT	7 cut(s)	133, 209, 1106, 1215, 1599, 1771, 2081
HpyCH4IV	ACGT	1 cut(s)	754
HpyF10VI	GCNNNNNNNGC	5 cut(s)	76, 1143, 1188, 1197, 1341
HpyF3I	CTNAG	4 cut(s)	378, 1719, 1782, 1889
HpySE526I	ACGT	1 cut(s)	754
Hsp92II	CATG	9 cut(s)	751, 787, 1186, 1270, 1283, 1607, 1780, 1842, 2179
HspAI	GCGC	4 cut(s)	203, 948, 1615, 1868
Ksp22I	TGATCA	3 cut(s)	724, 1033, 1824
LmnI	GCTCC	2 cut(s)	1686, 2063
LweI	GCATC	2 cut(s)	31, 136
MaeI	CTAG	3 cut(s)	962, 1736, 2156
MaeII	ACGT	1 cut(s)	754
MaeIII	GTNAC	4 cut(s)	859, 1168, 1282, 2020
MfeI	CAATTG	1 cut(s)	2033
MflI	RGATCY	4 cut(s)	111, 920, 1384, 2149
MhlI	GDGCHC	3 cut(s)	534, 896, 1467
MluI	ACGCGT	1 cut(s)	856
MlyI	GAGTC	3 cut(s)	118, 235, 461
MmeI	TCCRAC	6 cut(s)	65, 152, 152, 1410, 1668, 1862
Mph1103I	ATGCAT	2 cut(s)	1924, 2181
MroXI	GAANNNNTTC	2 cut(s)	408, 1299
MseI	TTAA	5 cut(s)	101, 153, 882, 1130, 2124
MspA1I	CMGCKG	1 cut(s)	579
MspCI	CTTAAG	1 cut(s)	881
MspI	CCGG	3 cut(s)	449, 635, 1757
MspR9I	CCNGG	4 cut(s)	347, 449, 635, 1757
MunI	CAATTG	1 cut(s)	2033
Mva1269I	GAATGC	1 cut(s)	1922
MvaI	CCWGG	1 cut(s)	347
MvnI	CGCG	1 cut(s)	858
MwoI	GCNNNNNNNGC	5 cut(s)	76, 1143, 1188, 1197, 1341
NciI	CCSGG	3 cut(s)	449, 635, 1757
NcoI	CCATGG	1 cut(s)	783
NlaIII	CATG	9 cut(s)	751, 787, 1186, 1270, 1283, 1607, 1780, 1842, 2179
NlaIV	GGNNCC	4 cut(s)	1208, 1405, 1705, 2143
NmeAIII	GCCGAG	2 cut(s)	338, 1534
NmuCI	GTSAC	2 cut(s)	859, 1168
NsiI	ATGCAT	2 cut(s)	1924, 2181
NspI	RCATGY	2 cut(s)	1186, 2179
NspV	TTCGAA	1 cut(s)	717
PaeI	GCATGC	2 cut(s)	1186, 2179
PagI	TCATGA	2 cut(s)	747, 1603
PctI	GAATGC	1 cut(s)	1922
PdmI	GAANNNNTTC	2 cut(s)	408, 1299
PfeI	GAWTC	6 cut(s)	623, 1261, 1295, 1317, 1561, 1885
PflFI	GACNNNGTC	2 cut(s)	46, 225
PfoI	TCCNGGA	2 cut(s)	345, 633
PleI	GAGTC	3 cut(s)	118, 234, 460
PpsI	GAGTC	3 cut(s)	118, 234, 460
PpuMI	RGGWCCY	1 cut(s)	1206
PsiI	TTATAA	1 cut(s)	2013
Psp124BI	GAGCTC	1 cut(s)	534
Psp1406I	AACGTT	1 cut(s)	754
Psp5II	RGGWCCY	1 cut(s)	1206
Psp6I	CCWGG	1 cut(s)	345
PspFI	CCCAGC	1 cut(s)	1154
PspGI	CCWGG	1 cut(s)	345
PspN4I	GGNNCC	4 cut(s)	1208, 1405, 1705, 2143
PspPI	GGNCC	6 cut(s)	38, 595, 1206, 1403, 1893, 2142
PspPPI	RGGWCCY	1 cut(s)	1206
PsrI	GAACNNNNNNTAC	2 cut(s)	596, 628
PstI	CTGCAG	2 cut(s)	979, 1123
PsuI	RGATCY	4 cut(s)	111, 920, 1384, 2149
PsyI	GACNNNGTC	2 cut(s)	46, 225
RsaI	GTAC	7 cut(s)	75, 342, 614, 642, 797, 936, 1916
RsaNI	GTAC	7 cut(s)	74, 341, 613, 641, 796, 935, 1915
SacI	GAGCTC	1 cut(s)	534
SaqAI	TTAA	5 cut(s)	101, 153, 882, 1130, 2124
Sau96I	GGNCC	6 cut(s)	38, 595, 1206, 1403, 1893, 2142
ScaI	AGTACT	2 cut(s)	75, 342
SchI	GAGTC	3 cut(s)	118, 235, 461
ScrFI	CCNGG	4 cut(s)	347, 449, 635, 1757
SduI	GDGCHC	3 cut(s)	534, 896, 1467
SfaNI	GCATC	2 cut(s)	31, 136
SfcI	CTRYAG	5 cut(s)	274, 802, 975, 1119, 2133
SfuI	TTCGAA	1 cut(s)	717
SinI	GGWCC	4 cut(s)	38, 595, 1206, 1403
SmlI	CTYRAG	6 cut(s)	599, 656, 881, 889, 1360, 2105
SmoI	CTYRAG	6 cut(s)	599, 656, 881, 889, 1360, 2105
SpeI	ACTAGT	1 cut(s)	2155
SphI	GCATGC	2 cut(s)	1186, 2179
SsiI	CCGC	7 cut(s)	149, 464, 579, 945, 1135, 1138, 1848
SspMI	CTAG	3 cut(s)	962, 1736, 2156
SstI	GAGCTC	1 cut(s)	534
StyD4I	CCNGG	4 cut(s)	345, 447, 633, 1755
StyI	CCWWGG	2 cut(s)	783, 1800
TaaI	ACNGT	7 cut(s)	133, 209, 1106, 1215, 1599, 1771, 2081
TaiI	ACGT	1 cut(s)	757
TaqI	TCGA	7 cut(s)	120, 337, 521, 717, 1072, 1853, 1995
TaqII	GACCGA	1 cut(s)	238
TatI	WGTACW	4 cut(s)	73, 340, 934, 1914
TauI	GCSGC	4 cut(s)	467, 582, 948, 1140
TfiI	GAWTC	6 cut(s)	623, 1261, 1295, 1317, 1561, 1885
Tru1I	TTAA	5 cut(s)	101, 153, 882, 1130, 2124
Tru9I	TTAA	5 cut(s)	101, 153, 882, 1130, 2124
TscAI	CASTG	5 cut(s)	40, 143, 1043, 1337, 1669
TseFI	GTSAC	2 cut(s)	859, 1168
Tsp45I	GTSAC	2 cut(s)	859, 1168
TspDTI	ATGAA	8 cut(s)	191, 764, 1268, 1431, 1574, 1592, 1765, 1827
TspRI	CASTG	5 cut(s)	40, 143, 1043, 1337, 1669
Tth111I	GACNNNGTC	2 cut(s)	46, 225
Vha464I	CTTAAG	1 cut(s)	881
VpaK11BI	GGWCC	4 cut(s)	38, 595, 1206, 1403
XapI	RAATTY	3 cut(s)	239, 713, 1964
XbaI	TCTAGA	1 cut(s)	1735
XceI	RCATGY	2 cut(s)	1186, 2179
XcmI	CCANNNNNNNNNTGG	1 cut(s)	832
XmnI	GAANNNNTTC	2 cut(s)	408, 1299
XspI	CTAG	3 cut(s)	962, 1736, 2156
ZrmI	AGTACT	2 cut(s)	75, 342
Zsp2I	ATGCAT	2 cut(s)	1924, 2181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.