RchiOBHm_Chr2g0087341

repressing transcription factor binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000518
Physical Location & Seq
Reverse (-)
2124342 .. 2125355
1014 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46279

Sequence Viewer

Length: 1014 bp
ATGTCTATGGGTTCTTCACTTCCGATCTCGGAAGCGATTAGGGTTCGGGCCTCGAGCGAGACCGGCCGTGGCAGCAAGACCAGAGATTCCGATCTTGTTCGAGAAAATGCAAGAAACCATCTTTTGGCGACGGGCTGGACTTTCTTGCGGGCAAGAAAGTCCAACAATTACATGGAGCTCCGGTACTACTCACCGGCCGGAAAAGTCTTCTACTCGCTCCGTACAGCCTTCAAGAGCGTAGTTTCTCAAAGCCTGGAAGTGGACTCAACGACGTCGTCGCCTTTGTTCTGCATGAAGACTTGTTCATCAAGAAAGAGAAGGAAGATAAAGATGAGAACAATGGAGGACGTAATGAACGACGAAAGGTTTTTTCTCTCCGGCATTGACAGGCTTTTGGGAAGTCCGAGTCCGGTGAACGGCCGGAGCGATCTTTCTTGGACTTTACTCAAGTCCGACTTGAAAGAGAACAATAATCACAACCTCAAGCTCAACCAAGCCCTAAAAGTCATGCACCAGTGTTTTAAGCCTTCTAAGGACCCTTTGACCCACAAAGATGTAGCGGAGGACATCATTTTCAATAGGGAAAGAGAGTTTTACACAGTCGTTTTGGAGAAGCAAGACAAGGTGGTCACCGCCGCTAATGTGAGGATTCATGGTGTGGTGGCAGAACTGCCACTTATGGCAACTAAATTTAAGTACCGGAGACAAGGGATGTGCAAGATTTTGATGAATGAGATTGAGAACTGGCTTAGGGACTCCGGGATCGAGAGGCTTGTCTTGCCTTCGGCACAAAGCGCGCTGAAGACATGGACTAGTAGTTCGATTGGGTTTTCGACTATGACTGAGGATGACAAGGCAGATCTTCTCATTGCTTATGATTGCTTGGATTTCCAGGACACTGTTATGTGTGAGAAACAACTGATCTTGAAGAAAAATGAGAACGGTGATGGTGAATCTAGTGATGAAGGCTCTACAATATCACATGAAGACTACACTTATGGGGACGATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000118 GO:0000228 GO:0000785 GO:0000790 GO:0001085 GO:0001103 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0004407 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006325 GO:0006355 GO:0006357 GO:0006464 GO:0006476 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0008270 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0015630 GO:0016043 GO:0016462 GO:0016569 GO:0016570 GO:0016575 GO:0016581 GO:0016787 GO:0016810 GO:0016811 GO:0016817 GO:0016818 GO:0016887 GO:0017053 GO:0017111 GO:0019213 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032392 GO:0032508 GO:0032991 GO:0033558 GO:0035601 GO:0036211 GO:0042623 GO:0042826 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0046872 GO:0046914 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070035 GO:0070491 GO:0070603 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090545 GO:0090568 GO:0097159 GO:0098732 GO:0140096 GO:0140097 GO:1901363 GO:1901564 GO:1902494 GO:1903506 GO:1904949 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1 Acetyltransf_10 Agenet Jas PHD

Protein Analysis

337

Amino Acids

38.32

Weight (kDa)

8.11

Isoelectric Point (pI)

48.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7028 PF22970 24 - 83 2.4e-16 Domain of unknown function (DUF7028)
IDM1_C PF23209 174 - 306 9.1e-38 Increased DNA methylation 1, C-terminal domain
Acetyltransf_1 PF00583 182 - 266 8.6e-07 Acetyltransferase (GNAT) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000518)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21681 FvH4_3g29252 FvH4_3g38950 FvH4_3g44310 FvH4_5g29400
malus_domestica MD03G1066300.v1.1
rosa_chinensis RchiOBHm_Chr2g0087341 RchiOBHm_Chr7g0225691 RchiOBHm_Chr7g0225721 RchiOBHm_Chr7g0225751 RchiOBHm_Chr7g0225781 RchiOBHm_Chr7g0225811 RchiOBHm_Chr7g0225821 RchiOBHm_Chr7g0225841 RchiOBHm_Chr7g0225941
rosa_laevigata RLG00000001777 RLG00000001779 RLG00000001787 RLG00000001796 RLG00000015858 RLG00000018399 RLG00000030202
rosa_multiflora Rmu_co7995100.1_g000001 Rmu_sc0003367.1_g000025 Rmu_sc0004082.1_g000018 Rmu_sc0006064.1_g000002 Rmu_sc0011806.1_g000001 Rmu_sc0014642.1_g000005 Rmu_sc0014767.1_g000003 Rmu_sc0015723.1_g000001 Rmu_sc0030795.1_g000001 Rmu_sc0033647.1_g000001
rosa_roxburghii Rroxscaffold_1G00028220 Rroxscaffold_2G00089180 Rroxscaffold_2G00125860 Rroxscaffold_3G00233350 Rroxscaffold_3G00239570 Rroxscaffold_4G00325690 Rroxscaffold_5G00348560 Rroxscaffold_7G00198070
rosa_rugosa Rorug01G0045600 Rorug01G0474300.1 Rorug07G0220000 Rorug07G0220100 Rorug07G0220200 Rorug07G0220300 Rorug07G0232800 Rorug07G0233000 Rorug07G0233100 Rorug07G0233100 Rorug07G0233200 Rorug07G0233300.1
rosa_samantha Rh1AG061100 Rh1BG052200 Rh1CG063300 Rh1CG063600 Rh1DG067700 Rh2AG027900 Rh2BG027400 Rh2CG028200 Rh2DG028000 Rh7AG369700 Rh7AG370100 Rh7AG371200 Rh7AG387800 Rh7BG366500 Rh7BG366800 Rh7BG367000 Rh7BG367600 Rh7CG388600 Rh7CG389000 Rh7CG389800 Rh7CG407400 Rh7DG377400 Rh7DG377500 Rh7DG377900 Rh7DG378600 Rh7DG378700 Rh7DG378800
rosa_wichuraiana Rw0G020970 Rw0G020980 Rw1G005200 Rw2G002210 Rw7G031830 Rw7G031860 Rw7G031900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 626
AatII GACGTC 1 cut(s) 275
AccB7I CCANNNNNTGG 1 cut(s) 124
AccII CGCG 1 cut(s) 797
AciI CCGC 4 cut(s) 148, 560, 633, 636
AclWI GGATC 1 cut(s) 770
AcoI YGGCCR 3 cut(s) 64, 195, 418
AcsI RAATTY 1 cut(s) 689
AcuI CTGAAG 1 cut(s) 821
AcyI GRCGYC 1 cut(s) 272
AfaI GTAC 3 cut(s) 185, 223, 698
AfiI CCNNNNNNNGG 3 cut(s) 124, 259, 416
AgsI TTSAA 4 cut(s) 232, 460, 577, 928
AhlI ACTAGT 1 cut(s) 812
AjnI CCWGG 2 cut(s) 252, 891
AloI GAACNNNNNNTCC 2 cut(s) 802, 834
AluBI AGCT 2 cut(s) 178, 487
AluI AGCT 2 cut(s) 178, 487
Alw21I GWGCWC 1 cut(s) 180
Alw26I GTCTC 2 cut(s) 53, 697
AlwI GGATC 1 cut(s) 770
Ama87I CYCGRG 1 cut(s) 52
AoxI GGCC 4 cut(s) 48, 64, 195, 418
ApeKI GCWGC 1 cut(s) 72
ApoI RAATTY 1 cut(s) 689
ArsI GACNNNNNNTTYG 2 cut(s) 802, 834
AspLEI GCGC 2 cut(s) 797, 799
AspS9I GGNCC 2 cut(s) 48, 535
AsuC2I CCSGG 1 cut(s) 760
AsuHPI GGTGA 5 cut(s) 183, 424, 622, 956, 962
AvaI CYCGRG 1 cut(s) 52
AvaII GGWCC 1 cut(s) 535
BanII GRGCYC 1 cut(s) 180
BbsI GAAGAC 4 cut(s) 199, 302, 809, 993
Bbv12I GWGCWC 1 cut(s) 180
BbvI GCAGC 1 cut(s) 84
BccI CCATC 2 cut(s) 126, 941
BceAI ACGGC 2 cut(s) 51, 433
BciT130I CCWGG 2 cut(s) 254, 893
BcnI CCSGG 1 cut(s) 760
BcoDI GTCTC 2 cut(s) 53, 697
BcuI ACTAGT 1 cut(s) 812
BfaI CTAG 2 cut(s) 813, 957
BglII AGATCT 1 cut(s) 859
BisI GCNGC 2 cut(s) 73, 636
BlsI GCNGC 2 cut(s) 74, 637
Bme1390I CCNGG 3 cut(s) 254, 760, 893
Bme18I GGWCC 1 cut(s) 535
BmeT110I CYCGRG 1 cut(s) 52
BmgT120I GGNCC 2 cut(s) 48, 535
BmiI GGNNCC 1 cut(s) 537
BmrFI CCNGG 3 cut(s) 254, 760, 893
BpiI GAAGAC 4 cut(s) 199, 302, 809, 993
Bpu10I CCTNAGC 1 cut(s) 749
BpuEI CTTGAG 2 cut(s) 431, 467
BpuMI CCSGG 1 cut(s) 760
BsaBI GATNNNNATC 1 cut(s) 90
BsaHI GRCGYC 1 cut(s) 272
BsaI GGTCTC 1 cut(s) 53
BsaJI CCNNGG 1 cut(s) 67
BsaWI WCCGGW 3 cut(s) 180, 409, 699
BsaXI ACNNNNNCTCC 2 cut(s) 167, 197
Bsc4I CCNNNNNNNGG 3 cut(s) 124, 259, 416
Bse118I RCCGGY 2 cut(s) 62, 193
Bse1I ACTGG 2 cut(s) 514, 749
Bse3DI GCAATG 1 cut(s) 867
Bse8I GATNNNNATC 1 cut(s) 90
BseBI CCWGG 2 cut(s) 254, 893
BseDI CCNNGG 1 cut(s) 67
BseGI GGATG 2 cut(s) 717, 853
BseJI GATNNNNATC 1 cut(s) 90
BseLI CCNNNNNNNGG 3 cut(s) 124, 259, 416
BseMI GCAATG 1 cut(s) 867
BseMII CTCAG 1 cut(s) 834
BseNI ACTGG 2 cut(s) 514, 749
BsePI GCGCGC 1 cut(s) 795
BseX3I CGGCCG 3 cut(s) 64, 195, 418
BseXI GCAGC 1 cut(s) 84
Bsh1236I CGCG 1 cut(s) 797
Bsh1285I CGRYCG 3 cut(s) 67, 198, 421
BshFI GGCC 4 cut(s) 50, 66, 197, 420
BsiEI CGRYCG 3 cut(s) 67, 198, 421
BsiHKAI GWGCWC 1 cut(s) 180
BsiHKCI CYCGRG 1 cut(s) 52
BsiSI CCGG 9 cut(s) 63, 181, 194, 198, 378, 410, 421, 700, 759
BslFI GGGAC 1 cut(s) 767
BslI CCNNNNNNNGG 3 cut(s) 124, 259, 416
BsmAI GTCTC 2 cut(s) 53, 697
BsmFI GGGAC 1 cut(s) 767
BsnI GGCC 4 cut(s) 50, 66, 197, 420
Bso31I GGTCTC 1 cut(s) 53
BsoBI CYCGRG 1 cut(s) 52
Bsp1286I GDGCHC 1 cut(s) 180
Bsp143I GATC 6 cut(s) 24, 91, 427, 762, 859, 921
BspACI CCGC 4 cut(s) 148, 560, 633, 636
BspANI GGCC 4 cut(s) 50, 66, 197, 420
BspCNI CTCAG 1 cut(s) 835
BspFNI CGCG 1 cut(s) 797
BspLI GGNNCC 1 cut(s) 537
BspPI GGATC 1 cut(s) 770
BspTNI GGTCTC 1 cut(s) 53
BsrDI GCAATG 1 cut(s) 867
BsrFI RCCGGY 2 cut(s) 62, 193
BsrI ACTGG 2 cut(s) 514, 749
BssAI RCCGGY 2 cut(s) 62, 193
BssECI CCNNGG 1 cut(s) 67
BssHII GCGCGC 1 cut(s) 795
BssMI GATC 6 cut(s) 24, 91, 427, 762, 859, 921
BssNI GRCGYC 1 cut(s) 272
Bst2UI CCWGG 2 cut(s) 254, 893
Bst4CI ACNGT 3 cut(s) 601, 901, 944
BstACI GRCGYC 1 cut(s) 272
BstC8I GCNNGC 2 cut(s) 150, 797
BstDEI CTNAG 3 cut(s) 531, 749, 843
BstDSI CCRYGG 1 cut(s) 67
BstEII GGTNACC 1 cut(s) 628
BstF5I GGATG 2 cut(s) 717, 853
BstFNI CGCG 1 cut(s) 797
BstHHI GCGC 2 cut(s) 797, 799
BstKTI GATC 6 cut(s) 27, 94, 430, 765, 862, 924
BstMAI GTCTC 2 cut(s) 53, 697
BstMBI GATC 6 cut(s) 24, 91, 427, 762, 859, 921
BstMCI CGRYCG 3 cut(s) 67, 198, 421
BstMWI GCNNNNNNNGC 4 cut(s) 63, 72, 778, 794
BstNI CCWGG 2 cut(s) 254, 893
BstPI GGTNACC 1 cut(s) 628
BstSCI CCNGG 3 cut(s) 252, 758, 891
BstUI CGCG 1 cut(s) 797
BstV1I GCAGC 1 cut(s) 84
BstV2I GAAGAC 4 cut(s) 199, 302, 809, 993
BstX2I RGATCY 1 cut(s) 859
BstYI RGATCY 1 cut(s) 859
BstZI CGGCCG 3 cut(s) 64, 195, 418
BsuRI GGCC 4 cut(s) 50, 66, 197, 420
BtgI CCRYGG 1 cut(s) 67
BtsCI GGATG 2 cut(s) 717, 853
BtsIMutI CAGTG 2 cut(s) 521, 897
Cac8I GCNNGC 2 cut(s) 150, 797
CfoI GCGC 2 cut(s) 797, 799
Cfr10I RCCGGY 2 cut(s) 62, 193
Cfr13I GGNCC 2 cut(s) 48, 535
Csp6I GTAC 3 cut(s) 184, 222, 697
CviAII CATG 6 cut(s) 172, 292, 508, 653, 807, 983
CviQI GTAC 3 cut(s) 184, 222, 697
DdeI CTNAG 3 cut(s) 531, 749, 843
DpnI GATC 6 cut(s) 26, 93, 429, 764, 861, 923
DpnII GATC 6 cut(s) 24, 91, 427, 762, 859, 921
DrdI GACNNNNNNGTC 1 cut(s) 626
DseDI GACNNNNNNGTC 1 cut(s) 626
EaeI YGGCCR 3 cut(s) 64, 195, 418
EagI CGGCCG 3 cut(s) 64, 195, 418
Ecl136II GAGCTC 1 cut(s) 178
EclXI CGGCCG 3 cut(s) 64, 195, 418
Eco24I GRGCYC 1 cut(s) 180
Eco31I GGTCTC 1 cut(s) 53
Eco47I GGWCC 1 cut(s) 535
Eco52I CGGCCG 3 cut(s) 64, 195, 418
Eco53kI GAGCTC 1 cut(s) 178
Eco57I CTGAAG 1 cut(s) 821
Eco88I CYCGRG 1 cut(s) 52
Eco91I GGTNACC 1 cut(s) 628
EcoICRI GAGCTC 1 cut(s) 178
EcoO109I RGGNCCY 1 cut(s) 535
EcoO65I GGTNACC 1 cut(s) 628
EcoRII CCWGG 2 cut(s) 252, 891
EcoT38I GRGCYC 1 cut(s) 180
FaeI CATG 6 cut(s) 175, 295, 511, 656, 810, 986
FalI AAGNNNNNCTT 2 cut(s) 440, 472
FaqI GGGAC 1 cut(s) 767
FatI CATG 6 cut(s) 171, 291, 507, 652, 806, 982
FauI CCCGC 1 cut(s) 141
Fnu4HI GCNGC 2 cut(s) 73, 636
FokI GGATG 2 cut(s) 724, 860
FriOI GRGCYC 1 cut(s) 180
Fsp4HI GCNGC 2 cut(s) 73, 636
FspBI CTAG 2 cut(s) 813, 957
GlaI GCGC 2 cut(s) 796, 798
GluI GCNGC 2 cut(s) 73, 636
HaeIII GGCC 4 cut(s) 50, 66, 197, 420
HapII CCGG 9 cut(s) 63, 181, 194, 198, 378, 410, 421, 700, 759
HhaI GCGC 2 cut(s) 797, 799
Hin1I GRCGYC 1 cut(s) 272
Hin1II CATG 6 cut(s) 175, 295, 511, 656, 810, 986
Hin6I GCGC 2 cut(s) 795, 797
HinP1I GCGC 2 cut(s) 795, 797
HinfI GANTC 6 cut(s) 86, 263, 406, 649, 755, 953
HpaII CCGG 9 cut(s) 63, 181, 194, 198, 378, 410, 421, 700, 759
HphI GGTGA 5 cut(s) 183, 424, 622, 956, 962
Hpy166II GTNNAC 2 cut(s) 262, 415
Hpy188I TCNGA 5 cut(s) 24, 31, 91, 405, 454
Hpy188III TCNNGA 5 cut(s) 101, 232, 309, 766, 925
Hpy8I GTNNAC 2 cut(s) 262, 415
Hpy99I CGWCG 5 cut(s) 133, 274, 277, 280, 362
HpyAV CCTTC 5 cut(s) 238, 312, 537, 792, 959
HpyCH4III ACNGT 3 cut(s) 601, 901, 944
HpyCH4IV ACGT 2 cut(s) 272, 348
HpyCH4V TGCA 4 cut(s) 110, 291, 511, 717
HpyF10VI GCNNNNNNNGC 4 cut(s) 63, 72, 778, 794
HpyF3I CTNAG 3 cut(s) 531, 749, 843
HpySE526I ACGT 2 cut(s) 272, 348
Hsp92I GRCGYC 1 cut(s) 272
Hsp92II CATG 6 cut(s) 175, 295, 511, 656, 810, 986
HspAI GCGC 2 cut(s) 795, 797
Kzo9I GATC 6 cut(s) 24, 91, 427, 762, 859, 921
LmnI GCTCC 4 cut(s) 175, 183, 222, 423
Lsp1109I GCAGC 1 cut(s) 84
MaeI CTAG 2 cut(s) 813, 957
MaeII ACGT 2 cut(s) 272, 348
MaeIII GTNAC 1 cut(s) 628
MalI GATC 6 cut(s) 26, 93, 429, 764, 861, 923
MboI GATC 6 cut(s) 24, 91, 427, 762, 859, 921
MboII GAAGA 8 cut(s) 6, 199, 307, 334, 814, 854, 940, 998
MflI RGATCY 1 cut(s) 859
MhlI GDGCHC 1 cut(s) 180
MluCI AATT 2 cut(s) 166, 689
MlyI GAGTC 3 cut(s) 257, 415, 749
MmeI TCCRAC 2 cut(s) 186, 477
MnlI CCTC 7 cut(s) 61, 337, 491, 556, 639, 762, 838
MseI TTAA 2 cut(s) 522, 693
MslI CAYNNNNRTG 2 cut(s) 552, 902
MspI CCGG 9 cut(s) 63, 181, 194, 198, 378, 410, 421, 700, 759
MspR9I CCNGG 3 cut(s) 254, 760, 893
MvaI CCWGG 2 cut(s) 254, 893
MvnI CGCG 1 cut(s) 797
MwoI GCNNNNNNNGC 4 cut(s) 63, 72, 778, 794
NciI CCSGG 1 cut(s) 760
NdeII GATC 6 cut(s) 24, 91, 427, 762, 859, 921
NlaIII CATG 6 cut(s) 175, 295, 511, 656, 810, 986
NlaIV GGNNCC 1 cut(s) 537
NmuCI GTSAC 1 cut(s) 628
PaeR7I CTCGAG 1 cut(s) 52
PauI GCGCGC 1 cut(s) 795
PcsI WCGNNNNNNNCGW 2 cut(s) 354, 423
PfeI GAWTC 3 cut(s) 86, 649, 953
PflFI GACNNNGTC 1 cut(s) 274
PflMI CCANNNNNTGG 1 cut(s) 124
PfoI TCCNGGA 2 cut(s) 758, 891
PkrI GCNGC 2 cut(s) 74, 637
PleI GAGTC 3 cut(s) 257, 414, 749
PpsI GAGTC 3 cut(s) 257, 414, 749
PpuMI RGGWCCY 1 cut(s) 535
Psp124BI GAGCTC 1 cut(s) 180
Psp5II RGGWCCY 1 cut(s) 535
Psp6I CCWGG 2 cut(s) 252, 891
PspEI GGTNACC 1 cut(s) 628
PspGI CCWGG 2 cut(s) 252, 891
PspN4I GGNNCC 1 cut(s) 537
PspPI GGNCC 2 cut(s) 48, 535
PspPPI RGGWCCY 1 cut(s) 535
PspXI VCTCGAGB 1 cut(s) 52
PsuI RGATCY 1 cut(s) 859
PsyI GACNNNGTC 1 cut(s) 274
PteI GCGCGC 1 cut(s) 795
RsaI GTAC 3 cut(s) 185, 223, 698
RsaNI GTAC 3 cut(s) 184, 222, 697
RseI CAYNNNNRTG 2 cut(s) 552, 902
SacI GAGCTC 1 cut(s) 180
SaqAI TTAA 2 cut(s) 522, 693
SatI GCNGC 2 cut(s) 73, 636
Sau3AI GATC 6 cut(s) 24, 91, 427, 762, 859, 921
Sau96I GGNCC 2 cut(s) 48, 535
SchI GAGTC 3 cut(s) 257, 415, 749
ScrFI CCNGG 3 cut(s) 254, 760, 893
SduI GDGCHC 1 cut(s) 180
SetI ASST 7 cut(s) 180, 275, 351, 368, 483, 489, 627
Sfr274I CTCGAG 1 cut(s) 52
SinI GGWCC 1 cut(s) 535
SlaI CTCGAG 1 cut(s) 52
SmiMI CAYNNNNRTG 2 cut(s) 552, 902
SmlI CTYRAG 3 cut(s) 52, 446, 482
SmoI CTYRAG 3 cut(s) 52, 446, 482
SpeI ACTAGT 1 cut(s) 812
Sse9I AATT 2 cut(s) 166, 689
SsiI CCGC 4 cut(s) 148, 560, 633, 636
SspMI CTAG 2 cut(s) 813, 957
SstI GAGCTC 1 cut(s) 180
StyD4I CCNGG 3 cut(s) 252, 758, 891
TaaI ACNGT 3 cut(s) 601, 901, 944
TaiI ACGT 2 cut(s) 275, 351
TaqI TCGA 5 cut(s) 53, 100, 765, 821, 833
TasI AATT 2 cut(s) 166, 689
TauI GCSGC 1 cut(s) 638
TfiI GAWTC 3 cut(s) 86, 649, 953
Tru1I TTAA 2 cut(s) 522, 693
Tru9I TTAA 2 cut(s) 522, 693
TscAI CASTG 2 cut(s) 521, 904
TseFI GTSAC 1 cut(s) 628
TseI GCWGC 1 cut(s) 72
Tsp45I GTSAC 1 cut(s) 628
TspDTI ATGAA 7 cut(s) 294, 308, 368, 641, 743, 978, 999
TspGWI ACGGA 1 cut(s) 209
TspRI CASTG 2 cut(s) 521, 904
Tth111I GACNNNGTC 1 cut(s) 274
Van91I CCANNNNNTGG 1 cut(s) 124
VpaK11BI GGWCC 1 cut(s) 535
XapI RAATTY 1 cut(s) 689
XcmI CCANNNNNNNNNTGG 1 cut(s) 169
XhoI CTCGAG 1 cut(s) 52
XspI CTAG 2 cut(s) 813, 957
ZraI GACGTC 1 cut(s) 273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.