repressing transcription factor binding
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 56, 77 |
| AciI | CCGC | 4 cut(s) | 39, 54, 69, 247 |
| AclWI | GGATC | 1 cut(s) | 180 |
| AcyI | GRCGYC | 1 cut(s) | 57 |
| Alw26I | GTCTC | 1 cut(s) | 244 |
| AlwI | GGATC | 1 cut(s) | 180 |
| AoxI | GGCC | 1 cut(s) | 117 |
| ApeKI | GCWGC | 1 cut(s) | 36 |
| AspLEI | GCGC | 1 cut(s) | 59 |
| AsuHPI | GGTGA | 2 cut(s) | 95, 122 |
| BanI | GGYRCC | 2 cut(s) | 56, 77 |
| BbsI | GAAGAC | 1 cut(s) | 201 |
| BbvI | GCAGC | 1 cut(s) | 48 |
| BcoDI | GTCTC | 1 cut(s) | 244 |
| BfaI | CTAG | 4 cut(s) | 204, 219, 228, 265 |
| BfoI | RGCGCY | 1 cut(s) | 60 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 54 |
| BisI | GCNGC | 4 cut(s) | 37, 40, 55, 248 |
| BlsI | GCNGC | 4 cut(s) | 38, 41, 56, 249 |
| BmiI | GGNNCC | 2 cut(s) | 58, 79 |
| BpiI | GAAGAC | 1 cut(s) | 201 |
| BsaBI | GATNNNNATC | 1 cut(s) | 171 |
| BsaHI | GRCGYC | 1 cut(s) | 57 |
| Bse118I | RCCGGY | 1 cut(s) | 80 |
| Bse1I | ACTGG | 1 cut(s) | 70 |
| Bse8I | GATNNNNATC | 1 cut(s) | 171 |
| BseJI | GATNNNNATC | 1 cut(s) | 171 |
| BseNI | ACTGG | 1 cut(s) | 70 |
| BseRI | GAGGAG | 1 cut(s) | 128 |
| BseXI | GCAGC | 1 cut(s) | 48 |
| BshFI | GGCC | 1 cut(s) | 119 |
| BshNI | GGYRCC | 2 cut(s) | 56, 77 |
| BsiSI | CCGG | 1 cut(s) | 81 |
| BslFI | GGGAC | 1 cut(s) | 173 |
| BsmAI | GTCTC | 1 cut(s) | 244 |
| BsmFI | GGGAC | 1 cut(s) | 173 |
| BsnI | GGCC | 1 cut(s) | 119 |
| Bsp143I | GATC | 1 cut(s) | 172 |
| BspACI | CCGC | 4 cut(s) | 39, 54, 69, 247 |
| BspANI | GGCC | 1 cut(s) | 119 |
| BspLI | GGNNCC | 2 cut(s) | 58, 79 |
| BspPI | GGATC | 1 cut(s) | 180 |
| BspT107I | GGYRCC | 2 cut(s) | 56, 77 |
| BsrFI | RCCGGY | 1 cut(s) | 80 |
| BsrI | ACTGG | 1 cut(s) | 70 |
| BssAI | RCCGGY | 1 cut(s) | 80 |
| BssMI | GATC | 1 cut(s) | 172 |
| BssNI | GRCGYC | 1 cut(s) | 57 |
| Bst4CI | ACNGT | 1 cut(s) | 110 |
| Bst6I | CTCTTC | 3 cut(s) | 84, 90, 96 |
| BstACI | GRCGYC | 1 cut(s) | 57 |
| BstH2I | RGCGCY | 1 cut(s) | 60 |
| BstHHI | GCGC | 1 cut(s) | 59 |
| BstKTI | GATC | 1 cut(s) | 175 |
| BstMAI | GTCTC | 1 cut(s) | 244 |
| BstMBI | GATC | 1 cut(s) | 172 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 33, 45, 54 |
| BstV1I | GCAGC | 1 cut(s) | 48 |
| BstV2I | GAAGAC | 1 cut(s) | 201 |
| BstX2I | RGATCY | 1 cut(s) | 172 |
| BstYI | RGATCY | 1 cut(s) | 172 |
| BsuRI | GGCC | 1 cut(s) | 119 |
| BtsIMutI | CAGTG | 1 cut(s) | 63 |
| CfoI | GCGC | 1 cut(s) | 59 |
| Cfr10I | RCCGGY | 1 cut(s) | 80 |
| CseI | GACGC | 1 cut(s) | 170 |
| CviAII | CATG | 1 cut(s) | 243 |
| CviJI | RGCY | 4 cut(s) | 21, 48, 119, 183 |
| CviKI_1 | RGCY | 4 cut(s) | 21, 48, 119, 183 |
| DinI | GGCGCC | 1 cut(s) | 58 |
| DpnI | GATC | 1 cut(s) | 174 |
| DpnII | GATC | 1 cut(s) | 172 |
| Eam1104I | CTCTTC | 3 cut(s) | 84, 90, 96 |
| EarI | CTCTTC | 3 cut(s) | 84, 90, 96 |
| EgeI | GGCGCC | 1 cut(s) | 58 |
| EheI | GGCGCC | 1 cut(s) | 58 |
| FaeI | CATG | 1 cut(s) | 246 |
| FaiI | YATR | 2 cut(s) | 24, 244 |
| FaqI | GGGAC | 1 cut(s) | 173 |
| FatI | CATG | 1 cut(s) | 242 |
| Fnu4HI | GCNGC | 4 cut(s) | 37, 40, 55, 248 |
| Fsp4HI | GCNGC | 4 cut(s) | 37, 40, 55, 248 |
| FspBI | CTAG | 4 cut(s) | 204, 219, 228, 265 |
| GlaI | GCGC | 1 cut(s) | 58 |
| GluI | GCNGC | 4 cut(s) | 37, 40, 55, 248 |
| HaeII | RGCGCY | 1 cut(s) | 60 |
| HaeIII | GGCC | 1 cut(s) | 119 |
| HapII | CCGG | 1 cut(s) | 81 |
| HgaI | GACGC | 1 cut(s) | 170 |
| HhaI | GCGC | 1 cut(s) | 59 |
| Hin1I | GRCGYC | 1 cut(s) | 57 |
| Hin1II | CATG | 1 cut(s) | 246 |
| Hin6I | GCGC | 1 cut(s) | 57 |
| HinP1I | GCGC | 1 cut(s) | 57 |
| HinfI | GANTC | 1 cut(s) | 29 |
| HpaII | CCGG | 1 cut(s) | 81 |
| HphI | GGTGA | 2 cut(s) | 95, 122 |
| Hpy188I | TCNGA | 1 cut(s) | 187 |
| Hpy188III | TCNNGA | 1 cut(s) | 140 |
| HpyCH4III | ACNGT | 1 cut(s) | 110 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 33, 45, 54 |
| Hsp92I | GRCGYC | 1 cut(s) | 57 |
| Hsp92II | CATG | 1 cut(s) | 246 |
| HspAI | GCGC | 1 cut(s) | 57 |
| KasI | GGCGCC | 1 cut(s) | 56 |
| Kzo9I | GATC | 1 cut(s) | 172 |
| LpnPI | CCDG | 4 cut(s) | 46, 51, 94, 225 |
| Lsp1109I | GCAGC | 1 cut(s) | 48 |
| MaeI | CTAG | 4 cut(s) | 204, 219, 228, 265 |
| MalI | GATC | 1 cut(s) | 174 |
| MboI | GATC | 1 cut(s) | 172 |
| MboII | GAAGA | 4 cut(s) | 101, 107, 113, 206 |
| MflI | RGATCY | 1 cut(s) | 172 |
| Mly113I | GGCGCC | 1 cut(s) | 57 |
| MlyI | GAGTC | 1 cut(s) | 38 |
| MnlI | CCTC | 5 cut(s) | 79, 85, 91, 106, 109 |
| MspA1I | CMGCKG | 1 cut(s) | 39 |
| MspI | CCGG | 1 cut(s) | 81 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 33, 45, 54 |
| NarI | GGCGCC | 1 cut(s) | 57 |
| NdeII | GATC | 1 cut(s) | 172 |
| NlaIII | CATG | 1 cut(s) | 246 |
| NlaIV | GGNNCC | 2 cut(s) | 58, 79 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 147 |
| PkrI | GCNGC | 4 cut(s) | 38, 41, 56, 249 |
| PleI | GAGTC | 1 cut(s) | 37 |
| PluTI | GGCGCC | 1 cut(s) | 60 |
| PpsI | GAGTC | 1 cut(s) | 37 |
| PspN4I | GGNNCC | 2 cut(s) | 58, 79 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 199, 231 |
| PsuI | RGATCY | 1 cut(s) | 172 |
| SatI | GCNGC | 4 cut(s) | 37, 40, 55, 248 |
| Sau3AI | GATC | 1 cut(s) | 172 |
| SchI | GAGTC | 1 cut(s) | 38 |
| SetI | ASST | 1 cut(s) | 261 |
| SfoI | GGCGCC | 1 cut(s) | 58 |
| SsiI | CCGC | 4 cut(s) | 39, 54, 69, 247 |
| SspDI | GGCGCC | 1 cut(s) | 56 |
| SspMI | CTAG | 4 cut(s) | 204, 219, 228, 265 |
| TaaI | ACNGT | 1 cut(s) | 110 |
| TauI | GCSGC | 3 cut(s) | 42, 57, 250 |
| TscAI | CASTG | 1 cut(s) | 70 |
| TseI | GCWGC | 1 cut(s) | 36 |
| TspDTI | ATGAA | 1 cut(s) | 207 |
| TspRI | CASTG | 1 cut(s) | 70 |
| XspI | CTAG | 4 cut(s) | 204, 219, 228, 265 |