repressing transcription factor binding
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 93, 186 |
| AclI | AACGTT | 1 cut(s) | 237 |
| AclWI | GGATC | 2 cut(s) | 582, 676 |
| AcsI | RAATTY | 3 cut(s) | 300, 554, 678 |
| AfaI | GTAC | 5 cut(s) | 68, 265, 381, 538, 690 |
| AfeI | AGCGCT | 1 cut(s) | 432 |
| AgsI | TTSAA | 2 cut(s) | 293, 560 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 222, 254 |
| AluBI | AGCT | 6 cut(s) | 182, 317, 469, 697, 727, 781 |
| AluI | AGCT | 6 cut(s) | 182, 317, 469, 697, 727, 781 |
| AlwI | GGATC | 2 cut(s) | 582, 676 |
| Aor51HI | AGCGCT | 1 cut(s) | 432 |
| AoxI | GGCC | 2 cut(s) | 18, 90 |
| ApeKI | GCWGC | 1 cut(s) | 182 |
| ApoI | RAATTY | 3 cut(s) | 300, 554, 678 |
| AspLEI | GCGC | 1 cut(s) | 433 |
| AspS9I | GGNCC | 1 cut(s) | 152 |
| AsuHPI | GGTGA | 4 cut(s) | 322, 356, 379, 778 |
| AvaII | GGWCC | 1 cut(s) | 152 |
| BbvI | GCAGC | 1 cut(s) | 169 |
| BccI | CCATC | 1 cut(s) | 710 |
| BfaI | CTAG | 2 cut(s) | 11, 134 |
| BfmI | CTRYAG | 2 cut(s) | 318, 672 |
| BfoI | RGCGCY | 1 cut(s) | 434 |
| BisI | GCNGC | 3 cut(s) | 93, 183, 186 |
| BlsI | GCNGC | 3 cut(s) | 94, 184, 187 |
| Bme18I | GGWCC | 1 cut(s) | 152 |
| BmgT120I | GGNCC | 1 cut(s) | 152 |
| BmiI | GGNNCC | 2 cut(s) | 154, 597 |
| BmsI | GCATC | 3 cut(s) | 91, 225, 610 |
| BsaBI | GATNNNNATC | 1 cut(s) | 333 |
| BsaJI | CCNNGG | 1 cut(s) | 684 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 120, 150 |
| Bse3DI | GCAATG | 2 cut(s) | 189, 614 |
| Bse8I | GATNNNNATC | 1 cut(s) | 333 |
| BseDI | CCNNGG | 1 cut(s) | 684 |
| BseJI | GATNNNNATC | 1 cut(s) | 333 |
| BseMI | GCAATG | 2 cut(s) | 189, 614 |
| BseXI | GCAGC | 1 cut(s) | 169 |
| BshFI | GGCC | 2 cut(s) | 20, 92 |
| BslFI | GGGAC | 1 cut(s) | 138 |
| BsmFI | GGGAC | 1 cut(s) | 138 |
| BsnI | GGCC | 2 cut(s) | 20, 92 |
| Bsp1407I | TGTACA | 2 cut(s) | 379, 536 |
| Bsp143I | GATC | 4 cut(s) | 564, 574, 668, 737 |
| BspACI | CCGC | 2 cut(s) | 93, 186 |
| BspANI | GGCC | 2 cut(s) | 20, 92 |
| BspHI | TCATGA | 1 cut(s) | 646 |
| BspLI | GGNNCC | 2 cut(s) | 154, 597 |
| BspPI | GGATC | 2 cut(s) | 582, 676 |
| BsrDI | GCAATG | 2 cut(s) | 189, 614 |
| BsrGI | TGTACA | 2 cut(s) | 379, 536 |
| BssECI | CCNNGG | 1 cut(s) | 684 |
| BssMI | GATC | 4 cut(s) | 564, 574, 668, 737 |
| BssT1I | CCWWGG | 1 cut(s) | 684 |
| Bst4CI | ACNGT | 3 cut(s) | 37, 322, 536 |
| Bst6I | CTCTTC | 1 cut(s) | 555 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 101 |
| BstAUI | TGTACA | 2 cut(s) | 379, 536 |
| BstDEI | CTNAG | 1 cut(s) | 434 |
| BstH2I | RGCGCY | 1 cut(s) | 434 |
| BstHHI | GCGC | 1 cut(s) | 433 |
| BstKTI | GATC | 4 cut(s) | 567, 577, 671, 740 |
| BstMBI | GATC | 4 cut(s) | 564, 574, 668, 737 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 101, 191, 604 |
| BstSFI | CTRYAG | 2 cut(s) | 318, 672 |
| BstV1I | GCAGC | 1 cut(s) | 169 |
| BstX2I | RGATCY | 2 cut(s) | 574, 668 |
| BstYI | RGATCY | 2 cut(s) | 574, 668 |
| BsuRI | GGCC | 2 cut(s) | 20, 92 |
| BtsIMutI | CAGTG | 1 cut(s) | 532 |
| CciI | TCATGA | 1 cut(s) | 646 |
| CfoI | GCGC | 1 cut(s) | 433 |
| Cfr13I | GGNCC | 1 cut(s) | 152 |
| Csp6I | GTAC | 5 cut(s) | 67, 264, 380, 537, 689 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 208, 243 |
| CviAII | CATG | 1 cut(s) | 647 |
| CviQI | GTAC | 5 cut(s) | 67, 264, 380, 537, 689 |
| DdeI | CTNAG | 1 cut(s) | 434 |
| DpnI | GATC | 4 cut(s) | 566, 576, 670, 739 |
| DpnII | GATC | 4 cut(s) | 564, 574, 668, 737 |
| Eam1104I | CTCTTC | 1 cut(s) | 555 |
| EarI | CTCTTC | 1 cut(s) | 555 |
| Eco130I | CCWWGG | 1 cut(s) | 684 |
| Eco147I | AGGCCT | 1 cut(s) | 20 |
| Eco47I | GGWCC | 1 cut(s) | 152 |
| Eco47III | AGCGCT | 1 cut(s) | 432 |
| EcoO109I | RGGNCCY | 1 cut(s) | 152 |
| EcoRI | GAATTC | 1 cut(s) | 678 |
| EcoT14I | CCWWGG | 1 cut(s) | 684 |
| ErhI | CCWWGG | 1 cut(s) | 684 |
| FaeI | CATG | 1 cut(s) | 650 |
| FaiI | YATR | 7 cut(s) | 402, 485, 593, 602, 648, 764, 775 |
| FaqI | GGGAC | 1 cut(s) | 138 |
| FatI | CATG | 1 cut(s) | 646 |
| Fnu4HI | GCNGC | 3 cut(s) | 93, 183, 186 |
| Fsp4HI | GCNGC | 3 cut(s) | 93, 183, 186 |
| FspBI | CTAG | 2 cut(s) | 11, 134 |
| GlaI | GCGC | 1 cut(s) | 432 |
| GluI | GCNGC | 3 cut(s) | 93, 183, 186 |
| HaeII | RGCGCY | 1 cut(s) | 434 |
| HaeIII | GGCC | 2 cut(s) | 20, 92 |
| HhaI | GCGC | 1 cut(s) | 433 |
| Hin1II | CATG | 1 cut(s) | 650 |
| Hin6I | GCGC | 1 cut(s) | 431 |
| HinP1I | GCGC | 1 cut(s) | 431 |
| HinfI | GANTC | 2 cut(s) | 506, 769 |
| HphI | GGTGA | 4 cut(s) | 322, 356, 379, 778 |
| Hpy166II | GTNNAC | 2 cut(s) | 8, 370 |
| Hpy188I | TCNGA | 1 cut(s) | 392 |
| Hpy188III | TCNNGA | 2 cut(s) | 203, 647 |
| Hpy8I | GTNNAC | 2 cut(s) | 8, 370 |
| Hpy99I | CGWCG | 1 cut(s) | 37 |
| HpyAV | CCTTC | 3 cut(s) | 205, 290, 290 |
| HpyCH4III | ACNGT | 3 cut(s) | 37, 322, 536 |
| HpyCH4IV | ACGT | 2 cut(s) | 85, 237 |
| HpyCH4V | TGCA | 5 cut(s) | 116, 487, 584, 703, 732 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 101, 191, 604 |
| HpyF3I | CTNAG | 1 cut(s) | 434 |
| HpySE526I | ACGT | 2 cut(s) | 85, 237 |
| Hsp92II | CATG | 1 cut(s) | 650 |
| HspAI | GCGC | 1 cut(s) | 431 |
| Kzo9I | GATC | 4 cut(s) | 564, 574, 668, 737 |
| LmnI | GCTCC | 2 cut(s) | 595, 724 |
| LpnPI | CCDG | 6 cut(s) | 74, 75, 90, 102, 368, 660 |
| Lsp1109I | GCAGC | 1 cut(s) | 169 |
| LweI | GCATC | 3 cut(s) | 91, 225, 610 |
| MaeI | CTAG | 2 cut(s) | 11, 134 |
| MaeII | ACGT | 2 cut(s) | 85, 237 |
| MaeIII | GTNAC | 1 cut(s) | 766 |
| MalI | GATC | 4 cut(s) | 566, 576, 670, 739 |
| MboI | GATC | 4 cut(s) | 564, 574, 668, 737 |
| MboII | GAAGA | 4 cut(s) | 305, 359, 450, 572 |
| MflI | RGATCY | 2 cut(s) | 574, 668 |
| MluCI | AATT | 7 cut(s) | 111, 143, 162, 288, 300, 554, 678 |
| MlyI | GAGTC | 1 cut(s) | 763 |
| MmeI | TCCRAC | 1 cut(s) | 304 |
| MnlI | CCTC | 5 cut(s) | 10, 122, 143, 301, 511 |
| MseI | TTAA | 4 cut(s) | 39, 72, 146, 614 |
| MspA1I | CMGCKG | 1 cut(s) | 182 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 101, 191, 604 |
| NdeII | GATC | 4 cut(s) | 564, 574, 668, 737 |
| NlaIII | CATG | 1 cut(s) | 650 |
| NlaIV | GGNNCC | 2 cut(s) | 154, 597 |
| NmuCI | GTSAC | 1 cut(s) | 766 |
| PagI | TCATGA | 1 cut(s) | 646 |
| PceI | AGGCCT | 1 cut(s) | 20 |
| PfeI | GAWTC | 1 cut(s) | 506 |
| PkrI | GCNGC | 3 cut(s) | 94, 184, 187 |
| PleI | GAGTC | 1 cut(s) | 763 |
| PpsI | GAGTC | 1 cut(s) | 763 |
| PpuMI | RGGWCCY | 1 cut(s) | 152 |
| Psp1406I | AACGTT | 1 cut(s) | 237 |
| Psp5II | RGGWCCY | 1 cut(s) | 152 |
| PspN4I | GGNNCC | 2 cut(s) | 154, 597 |
| PspPI | GGNCC | 1 cut(s) | 152 |
| PspPPI | RGGWCCY | 1 cut(s) | 152 |
| PsuI | RGATCY | 2 cut(s) | 574, 668 |
| PvuII | CAGCTG | 1 cut(s) | 182 |
| RsaI | GTAC | 5 cut(s) | 68, 265, 381, 538, 690 |
| RsaNI | GTAC | 5 cut(s) | 67, 264, 380, 537, 689 |
| SaqAI | TTAA | 4 cut(s) | 39, 72, 146, 614 |
| SatI | GCNGC | 3 cut(s) | 93, 183, 186 |
| Sau3AI | GATC | 4 cut(s) | 564, 574, 668, 737 |
| Sau96I | GGNCC | 1 cut(s) | 152 |
| SchI | GAGTC | 1 cut(s) | 763 |
| SfaNI | GCATC | 3 cut(s) | 91, 225, 610 |
| SfcI | CTRYAG | 2 cut(s) | 318, 672 |
| SinI | GGWCC | 1 cut(s) | 152 |
| Sse9I | AATT | 7 cut(s) | 111, 143, 162, 288, 300, 554, 678 |
| SseBI | AGGCCT | 1 cut(s) | 20 |
| SsiI | CCGC | 2 cut(s) | 93, 186 |
| SspI | AATATT | 1 cut(s) | 223 |
| SspMI | CTAG | 2 cut(s) | 11, 134 |
| StuI | AGGCCT | 1 cut(s) | 20 |
| StyI | CCWWGG | 1 cut(s) | 684 |
| TaaI | ACNGT | 3 cut(s) | 37, 322, 536 |
| TaiI | ACGT | 2 cut(s) | 88, 240 |
| TaqI | TCGA | 2 cut(s) | 32, 270 |
| TaqII | GACCGA | 1 cut(s) | 188 |
| TasI | AATT | 7 cut(s) | 111, 143, 162, 288, 300, 554, 678 |
| TatI | WGTACW | 2 cut(s) | 379, 536 |
| TauI | GCSGC | 2 cut(s) | 95, 188 |
| TfiI | GAWTC | 1 cut(s) | 506 |
| Tru1I | TTAA | 4 cut(s) | 39, 72, 146, 614 |
| Tru9I | TTAA | 4 cut(s) | 39, 72, 146, 614 |
| TscAI | CASTG | 1 cut(s) | 539 |
| TseFI | GTSAC | 1 cut(s) | 766 |
| TseI | GCWGC | 1 cut(s) | 182 |
| Tsp45I | GTSAC | 1 cut(s) | 766 |
| TspDTI | ATGAA | 4 cut(s) | 137, 417, 617, 635 |
| TspRI | CASTG | 1 cut(s) | 539 |
| VpaK11BI | GGWCC | 1 cut(s) | 152 |
| XapI | RAATTY | 3 cut(s) | 300, 554, 678 |
| XspI | CTAG | 2 cut(s) | 11, 134 |