repressing transcription factor binding
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| IDM1_C | PF23209 | 116 - 212 | 2.7e-21 | Increased DNA methylation 1, C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 497 |
| AccBSI | CCGCTC | 1 cut(s) | 323 |
| AccI | GTMKAC | 1 cut(s) | 44 |
| AccII | CGCG | 1 cut(s) | 61 |
| AciI | CCGC | 4 cut(s) | 7, 13, 321, 501 |
| AclWI | GGATC | 4 cut(s) | 163, 192, 221, 521 |
| AcsI | RAATTY | 2 cut(s) | 427, 620 |
| AcuI | CTGAAG | 2 cut(s) | 90, 552 |
| AcyI | GRCGYC | 1 cut(s) | 107 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 91, 226, 510 |
| AgsI | TTSAA | 3 cut(s) | 274, 293, 427 |
| AluBI | AGCT | 2 cut(s) | 313, 601 |
| AluI | AGCT | 2 cut(s) | 313, 601 |
| Alw21I | GWGCWC | 1 cut(s) | 603 |
| Alw26I | GTCTC | 2 cut(s) | 372, 562 |
| AlwI | GGATC | 4 cut(s) | 163, 192, 221, 521 |
| AoxI | GGCC | 2 cut(s) | 15, 554 |
| ApoI | RAATTY | 2 cut(s) | 427, 620 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 383, 415 |
| AspLEI | GCGC | 1 cut(s) | 63 |
| AspS9I | GGNCC | 1 cut(s) | 15 |
| AsuHPI | GGTGA | 1 cut(s) | 520 |
| BaeGI | GKGCMC | 1 cut(s) | 540 |
| BanI | GGYRCC | 1 cut(s) | 497 |
| BanII | GRGCYC | 1 cut(s) | 603 |
| BauI | CACGAG | 2 cut(s) | 338, 542 |
| BbsI | GAAGAC | 1 cut(s) | 391 |
| Bbv12I | GWGCWC | 1 cut(s) | 603 |
| BbvCI | CCTCAGC | 1 cut(s) | 387 |
| BccI | CCATC | 3 cut(s) | 341, 470, 484 |
| BceAI | ACGGC | 1 cut(s) | 120 |
| BcoDI | GTCTC | 2 cut(s) | 372, 562 |
| BfaI | CTAG | 1 cut(s) | 552 |
| BisI | GCNGC | 1 cut(s) | 501 |
| BlsI | GCNGC | 1 cut(s) | 502 |
| BmgT120I | GGNCC | 1 cut(s) | 15 |
| BmiI | GGNNCC | 1 cut(s) | 499 |
| BpiI | GAAGAC | 1 cut(s) | 391 |
| Bpu10I | CCTNAGC | 1 cut(s) | 387 |
| BsaHI | GRCGYC | 1 cut(s) | 107 |
| BsaJI | CCNNGG | 1 cut(s) | 504 |
| BsaWI | WCCGGW | 2 cut(s) | 84, 219 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 91, 226, 510 |
| Bse3DI | GCAATG | 1 cut(s) | 381 |
| BseDI | CCNNGG | 1 cut(s) | 504 |
| BseGI | GGATG | 3 cut(s) | 333, 472, 582 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 91, 226, 510 |
| BseMI | GCAATG | 1 cut(s) | 381 |
| BseMII | CTCAG | 2 cut(s) | 378, 572 |
| BseRI | GAGGAG | 2 cut(s) | 475, 500 |
| BseSI | GKGCMC | 1 cut(s) | 540 |
| BsgI | GTGCAG | 2 cut(s) | 289, 601 |
| Bsh1236I | CGCG | 1 cut(s) | 61 |
| BshFI | GGCC | 2 cut(s) | 17, 556 |
| BshNI | GGYRCC | 1 cut(s) | 497 |
| BsiHKAI | GWGCWC | 1 cut(s) | 603 |
| BsiSI | CCGG | 2 cut(s) | 85, 220 |
| BslFI | GGGAC | 1 cut(s) | 244 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 91, 226, 510 |
| BsmAI | GTCTC | 2 cut(s) | 372, 562 |
| BsmFI | GGGAC | 1 cut(s) | 244 |
| BsnI | GGCC | 2 cut(s) | 17, 556 |
| Bsp1286I | GDGCHC | 2 cut(s) | 540, 603 |
| Bsp143I | GATC | 5 cut(s) | 143, 155, 197, 213, 513 |
| BspACI | CCGC | 4 cut(s) | 7, 13, 321, 501 |
| BspANI | GGCC | 2 cut(s) | 17, 556 |
| BspCNI | CTCAG | 2 cut(s) | 379, 571 |
| BspFNI | CGCG | 1 cut(s) | 61 |
| BspHI | TCATGA | 1 cut(s) | 481 |
| BspLI | GGNNCC | 1 cut(s) | 499 |
| BspPI | GGATC | 4 cut(s) | 163, 192, 221, 521 |
| BspT107I | GGYRCC | 1 cut(s) | 497 |
| BsrBI | CCGCTC | 1 cut(s) | 323 |
| BsrDI | GCAATG | 1 cut(s) | 381 |
| BssECI | CCNNGG | 1 cut(s) | 504 |
| BssMI | GATC | 5 cut(s) | 143, 155, 197, 213, 513 |
| BssNI | GRCGYC | 1 cut(s) | 107 |
| BssSI | CACGAG | 2 cut(s) | 338, 542 |
| Bst2BI | CACGAG | 2 cut(s) | 338, 542 |
| Bst4CI | ACNGT | 3 cut(s) | 49, 448, 508 |
| Bst6I | CTCTTC | 1 cut(s) | 145 |
| BstACI | GRCGYC | 1 cut(s) | 107 |
| BstC8I | GCNNGC | 1 cut(s) | 15 |
| BstDEI | CTNAG | 2 cut(s) | 387, 558 |
| BstDSI | CCRYGG | 1 cut(s) | 504 |
| BstF5I | GGATG | 3 cut(s) | 333, 472, 582 |
| BstFNI | CGCG | 1 cut(s) | 61 |
| BstHHI | GCGC | 1 cut(s) | 63 |
| BstKTI | GATC | 5 cut(s) | 146, 158, 200, 216, 516 |
| BstMAI | GTCTC | 2 cut(s) | 372, 562 |
| BstMBI | GATC | 5 cut(s) | 143, 155, 197, 213, 513 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 329 |
| BstNSI | RCATGY | 1 cut(s) | 286 |
| BstSLI | GKGCMC | 1 cut(s) | 540 |
| BstUI | CGCG | 1 cut(s) | 61 |
| BstV2I | GAAGAC | 1 cut(s) | 391 |
| BstX2I | RGATCY | 1 cut(s) | 197 |
| BstYI | RGATCY | 1 cut(s) | 197 |
| BsuRI | GGCC | 2 cut(s) | 17, 556 |
| BtgI | CCRYGG | 1 cut(s) | 504 |
| BtsCI | GGATG | 3 cut(s) | 333, 472, 582 |
| BtsIMutI | CAGTG | 1 cut(s) | 444 |
| Cac8I | GCNNGC | 1 cut(s) | 15 |
| CciI | TCATGA | 1 cut(s) | 481 |
| CfoI | GCGC | 1 cut(s) | 63 |
| Cfr13I | GGNCC | 1 cut(s) | 15 |
| CseI | GACGC | 1 cut(s) | 96 |
| CviAII | CATG | 4 cut(s) | 261, 283, 482, 616 |
| CviJI | RGCY | 9 cut(s) | 17, 29, 268, 313, 352, 530, 556, 601, 613 |
| CviKI_1 | RGCY | 9 cut(s) | 17, 29, 268, 313, 352, 530, 556, 601, 613 |
| DdeI | CTNAG | 2 cut(s) | 387, 558 |
| DpnI | GATC | 5 cut(s) | 145, 157, 199, 215, 515 |
| DpnII | GATC | 5 cut(s) | 143, 155, 197, 213, 513 |
| Eam1104I | CTCTTC | 1 cut(s) | 145 |
| EarI | CTCTTC | 1 cut(s) | 145 |
| Ecl136II | GAGCTC | 1 cut(s) | 601 |
| Eco147I | AGGCCT | 1 cut(s) | 556 |
| Eco24I | GRGCYC | 1 cut(s) | 603 |
| Eco53kI | GAGCTC | 1 cut(s) | 601 |
| Eco57I | CTGAAG | 2 cut(s) | 90, 552 |
| EcoICRI | GAGCTC | 1 cut(s) | 601 |
| EcoRI | GAATTC | 1 cut(s) | 620 |
| EcoT38I | GRGCYC | 1 cut(s) | 603 |
| FaeI | CATG | 4 cut(s) | 264, 286, 485, 619 |
| FaiI | YATR | 5 cut(s) | 26, 262, 284, 483, 617 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 34 |
| FaqI | GGGAC | 1 cut(s) | 244 |
| FatI | CATG | 4 cut(s) | 260, 282, 481, 615 |
| FauI | CCCGC | 1 cut(s) | 6 |
| FblI | GTMKAC | 1 cut(s) | 44 |
| Fnu4HI | GCNGC | 1 cut(s) | 501 |
| FokI | GGATG | 3 cut(s) | 320, 479, 589 |
| FriOI | GRGCYC | 1 cut(s) | 603 |
| Fsp4HI | GCNGC | 1 cut(s) | 501 |
| FspBI | CTAG | 1 cut(s) | 552 |
| GlaI | GCGC | 1 cut(s) | 62 |
| GluI | GCNGC | 1 cut(s) | 501 |
| HaeIII | GGCC | 2 cut(s) | 17, 556 |
| HapII | CCGG | 2 cut(s) | 85, 220 |
| HgaI | GACGC | 1 cut(s) | 96 |
| HhaI | GCGC | 1 cut(s) | 63 |
| Hin1I | GRCGYC | 1 cut(s) | 107 |
| Hin1II | CATG | 4 cut(s) | 264, 286, 485, 619 |
| Hin6I | GCGC | 1 cut(s) | 61 |
| HinP1I | GCGC | 1 cut(s) | 61 |
| HinfI | GANTC | 4 cut(s) | 77, 293, 410, 416 |
| HpaII | CCGG | 2 cut(s) | 85, 220 |
| HphI | GGTGA | 1 cut(s) | 520 |
| Hpy166II | GTNNAC | 1 cut(s) | 45 |
| Hpy188I | TCNGA | 2 cut(s) | 415, 421 |
| Hpy188III | TCNNGA | 3 cut(s) | 141, 147, 482 |
| Hpy8I | GTNNAC | 1 cut(s) | 45 |
| Hpy99I | CGWCG | 2 cut(s) | 43, 112 |
| HpyAV | CCTTC | 1 cut(s) | 363 |
| HpyCH4III | ACNGT | 3 cut(s) | 49, 448, 508 |
| HpyCH4V | TGCA | 2 cut(s) | 306, 582 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 329 |
| HpyF3I | CTNAG | 2 cut(s) | 387, 558 |
| Hsp92I | GRCGYC | 1 cut(s) | 107 |
| Hsp92II | CATG | 4 cut(s) | 264, 286, 485, 619 |
| HspAI | GCGC | 1 cut(s) | 61 |
| Kzo9I | GATC | 5 cut(s) | 143, 155, 197, 213, 513 |
| LmnI | GCTCC | 2 cut(s) | 318, 606 |
| LpnPI | CCDG | 7 cut(s) | 81, 98, 154, 195, 233, 269, 568 |
| MaeI | CTAG | 1 cut(s) | 552 |
| MalI | GATC | 5 cut(s) | 145, 157, 199, 215, 515 |
| MbiI | CCGCTC | 1 cut(s) | 323 |
| MboI | GATC | 5 cut(s) | 143, 155, 197, 213, 513 |
| MboII | GAAGA | 4 cut(s) | 83, 86, 162, 391 |
| MflI | RGATCY | 1 cut(s) | 197 |
| MhlI | GDGCHC | 2 cut(s) | 540, 603 |
| MluCI | AATT | 3 cut(s) | 288, 427, 620 |
| MseI | TTAA | 1 cut(s) | 185 |
| MslI | CAYNNNNRTG | 1 cut(s) | 242 |
| MspI | CCGG | 2 cut(s) | 85, 220 |
| MvnI | CGCG | 1 cut(s) | 61 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 329 |
| NdeII | GATC | 5 cut(s) | 143, 155, 197, 213, 513 |
| NlaIII | CATG | 4 cut(s) | 264, 286, 485, 619 |
| NlaIV | GGNNCC | 1 cut(s) | 499 |
| NspI | RCATGY | 1 cut(s) | 286 |
| PagI | TCATGA | 1 cut(s) | 481 |
| PceI | AGGCCT | 1 cut(s) | 556 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 38, 345 |
| PfeI | GAWTC | 4 cut(s) | 77, 293, 410, 416 |
| PflFI | GACNNNGTC | 1 cut(s) | 395 |
| PkrI | GCNGC | 1 cut(s) | 502 |
| Psp124BI | GAGCTC | 1 cut(s) | 603 |
| PspN4I | GGNNCC | 1 cut(s) | 499 |
| PspPI | GGNCC | 1 cut(s) | 15 |
| PsuI | RGATCY | 1 cut(s) | 197 |
| PsyI | GACNNNGTC | 1 cut(s) | 395 |
| RseI | CAYNNNNRTG | 1 cut(s) | 242 |
| SacI | GAGCTC | 1 cut(s) | 603 |
| SaqAI | TTAA | 1 cut(s) | 185 |
| SatI | GCNGC | 1 cut(s) | 501 |
| Sau3AI | GATC | 5 cut(s) | 143, 155, 197, 213, 513 |
| Sau96I | GGNCC | 1 cut(s) | 15 |
| SduI | GDGCHC | 2 cut(s) | 540, 603 |
| SetI | ASST | 3 cut(s) | 258, 315, 603 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 242 |
| Sse9I | AATT | 3 cut(s) | 288, 427, 620 |
| SseBI | AGGCCT | 1 cut(s) | 556 |
| SsiI | CCGC | 4 cut(s) | 7, 13, 321, 501 |
| SspMI | CTAG | 1 cut(s) | 552 |
| SstI | GAGCTC | 1 cut(s) | 603 |
| StuI | AGGCCT | 1 cut(s) | 556 |
| TaaI | ACNGT | 3 cut(s) | 49, 448, 508 |
| TaqI | TCGA | 3 cut(s) | 158, 348, 402 |
| TasI | AATT | 3 cut(s) | 288, 427, 620 |
| TauI | GCSGC | 1 cut(s) | 503 |
| TfiI | GAWTC | 4 cut(s) | 77, 293, 410, 416 |
| Tru1I | TTAA | 1 cut(s) | 185 |
| Tru9I | TTAA | 1 cut(s) | 185 |
| TscAI | CASTG | 1 cut(s) | 451 |
| TspDTI | ATGAA | 3 cut(s) | 17, 207, 608 |
| TspRI | CASTG | 1 cut(s) | 451 |
| Tth111I | GACNNNGTC | 1 cut(s) | 395 |
| XapI | RAATTY | 2 cut(s) | 427, 620 |
| XceI | RCATGY | 1 cut(s) | 286 |
| XmiI | GTMKAC | 1 cut(s) | 44 |
| XspI | CTAG | 1 cut(s) | 552 |