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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0313861 |
| rosa_laevigata | RLG00000000965 |
| rosa_multiflora | Rmu_co8273039.1_g000001 Rmu_sc0000931.1_g000012 Rmu_sc0002045.1_g000026 Rmu_sc0003179.1_g000029 Rmu_sc0006198.1_g000015 |
| rosa_roxburghii | Rroxscaffold_1G00068970 Rroxscaffold_1G00068980 Rroxscaffold_1G00068990 Rroxscaffold_2G00129080 Rroxscaffold_2G00129090 Rroxscaffold_4G00309350 Rroxscaffold_7G00162680 Rroxscaffold_7G00162690 |
| rosa_samantha | Rh1AG005200 Rh1AG007200 Rh1AG007300 Rh1CG040300 Rh1CG040400 Rh1DG029100 Rh2AG353600 Rh3BG122100 Rh5AG305400 Rh5CG248700 Rh5CG248900 Rh5CG249000 Rh6BG075500 Rh6BG075600 Rh6CG151700 Rh7DG361800 Rh7DG361900 Rh7DG362800 Rh7DG363700 Rh7DG363800 Rh7DG364100 |
| rosa_wichuraiana | Rw1G000280 Rw1G010450 Rw6G013480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 85 |
| AatII | GACGTC | 1 cut(s) | 89 |
| AccII | CGCG | 1 cut(s) | 39 |
| AclWI | GGATC | 1 cut(s) | 180 |
| AcyI | GRCGYC | 2 cut(s) | 86, 254 |
| AfaI | GTAC | 3 cut(s) | 57, 443, 525 |
| AgsI | TTSAA | 3 cut(s) | 326, 437, 534 |
| AluBI | AGCT | 2 cut(s) | 413, 481 |
| AluI | AGCT | 2 cut(s) | 413, 481 |
| AlwI | GGATC | 1 cut(s) | 180 |
| AoxI | GGCC | 1 cut(s) | 92 |
| ApeKI | GCWGC | 1 cut(s) | 481 |
| AspS9I | GGNCC | 1 cut(s) | 18 |
| AsuHPI | GGTGA | 1 cut(s) | 438 |
| AvaII | GGWCC | 1 cut(s) | 18 |
| BbvI | GCAGC | 1 cut(s) | 468 |
| BccI | CCATC | 2 cut(s) | 100, 135 |
| BfaI | CTAG | 1 cut(s) | 426 |
| BisI | GCNGC | 1 cut(s) | 482 |
| BlsI | GCNGC | 1 cut(s) | 483 |
| Bme18I | GGWCC | 1 cut(s) | 18 |
| BmgT120I | GGNCC | 1 cut(s) | 18 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 37 |
| BsaHI | GRCGYC | 2 cut(s) | 86, 254 |
| BsaWI | WCCGGW | 1 cut(s) | 10 |
| BseGI | GGATG | 5 cut(s) | 146, 346, 385, 400, 472 |
| BseXI | GCAGC | 1 cut(s) | 468 |
| BseYI | CCCAGC | 1 cut(s) | 413 |
| Bsh1236I | CGCG | 1 cut(s) | 39 |
| BshFI | GGCC | 1 cut(s) | 94 |
| BsiSI | CCGG | 1 cut(s) | 11 |
| BslFI | GGGAC | 2 cut(s) | 97, 241 |
| BsmFI | GGGAC | 2 cut(s) | 97, 241 |
| BsnI | GGCC | 1 cut(s) | 94 |
| Bsp143I | GATC | 2 cut(s) | 40, 172 |
| Bsp68I | TCGCGA | 1 cut(s) | 39 |
| BspANI | GGCC | 1 cut(s) | 94 |
| BspFNI | CGCG | 1 cut(s) | 39 |
| BspPI | GGATC | 1 cut(s) | 180 |
| BssMI | GATC | 2 cut(s) | 40, 172 |
| BssNI | GRCGYC | 2 cut(s) | 86, 254 |
| Bst4CI | ACNGT | 1 cut(s) | 274 |
| BstACI | GRCGYC | 2 cut(s) | 86, 254 |
| BstC8I | GCNNGC | 4 cut(s) | 37, 96, 252, 279 |
| BstF5I | GGATG | 5 cut(s) | 146, 346, 385, 400, 472 |
| BstFNI | CGCG | 1 cut(s) | 39 |
| BstKTI | GATC | 2 cut(s) | 43, 175 |
| BstMBI | GATC | 2 cut(s) | 40, 172 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 100, 109, 260 |
| BstUI | CGCG | 1 cut(s) | 39 |
| BstV1I | GCAGC | 1 cut(s) | 468 |
| BsuRI | GGCC | 1 cut(s) | 94 |
| BtsCI | GGATG | 5 cut(s) | 146, 346, 385, 400, 472 |
| BtsIMutI | CAGTG | 1 cut(s) | 396 |
| BtuMI | TCGCGA | 1 cut(s) | 39 |
| Cac8I | GCNNGC | 4 cut(s) | 37, 96, 252, 279 |
| Cfr13I | GGNCC | 1 cut(s) | 18 |
| CseI | GACGC | 1 cut(s) | 243 |
| Csp6I | GTAC | 3 cut(s) | 56, 442, 524 |
| CviAII | CATG | 3 cut(s) | 268, 373, 473 |
| CviJI | RGCY | 4 cut(s) | 94, 250, 413, 481 |
| CviKI_1 | RGCY | 4 cut(s) | 94, 250, 413, 481 |
| CviQI | GTAC | 3 cut(s) | 56, 442, 524 |
| DpnI | GATC | 2 cut(s) | 42, 174 |
| DpnII | GATC | 2 cut(s) | 40, 172 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 85 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 85 |
| Eco47I | GGWCC | 1 cut(s) | 18 |
| FaeI | CATG | 3 cut(s) | 271, 376, 476 |
| FaqI | GGGAC | 2 cut(s) | 97, 241 |
| FatI | CATG | 3 cut(s) | 267, 372, 472 |
| FauNDI | CATATG | 1 cut(s) | 334 |
| Fnu4HI | GCNGC | 1 cut(s) | 482 |
| FokI | GGATG | 5 cut(s) | 153, 353, 392, 407, 479 |
| Fsp4HI | GCNGC | 1 cut(s) | 482 |
| FspBI | CTAG | 1 cut(s) | 426 |
| GluI | GCNGC | 1 cut(s) | 482 |
| GsaI | CCCAGC | 1 cut(s) | 417 |
| HaeIII | GGCC | 1 cut(s) | 94 |
| HapII | CCGG | 1 cut(s) | 11 |
| HgaI | GACGC | 1 cut(s) | 243 |
| Hin1I | GRCGYC | 2 cut(s) | 86, 254 |
| Hin1II | CATG | 3 cut(s) | 271, 376, 476 |
| HincII | GTYRAC | 1 cut(s) | 366 |
| HindII | GTYRAC | 1 cut(s) | 366 |
| HinfI | GANTC | 5 cut(s) | 145, 203, 407, 422, 501 |
| HpaII | CCGG | 1 cut(s) | 11 |
| HphI | GGTGA | 1 cut(s) | 438 |
| Hpy166II | GTNNAC | 3 cut(s) | 18, 366, 442 |
| Hpy188I | TCNGA | 2 cut(s) | 466, 506 |
| Hpy188III | TCNNGA | 2 cut(s) | 38, 404 |
| Hpy8I | GTNNAC | 3 cut(s) | 18, 366, 442 |
| Hpy99I | CGWCG | 1 cut(s) | 91 |
| HpyAV | CCTTC | 2 cut(s) | 118, 495 |
| HpyCH4III | ACNGT | 1 cut(s) | 274 |
| HpyCH4IV | ACGT | 1 cut(s) | 86 |
| HpyCH4V | TGCA | 4 cut(s) | 98, 224, 263, 281 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 100, 109, 260 |
| HpySE526I | ACGT | 1 cut(s) | 86 |
| Hsp92I | GRCGYC | 2 cut(s) | 86, 254 |
| Hsp92II | CATG | 3 cut(s) | 271, 376, 476 |
| Kzo9I | GATC | 2 cut(s) | 40, 172 |
| LmnI | GCTCC | 1 cut(s) | 478 |
| LpnPI | CCDG | 8 cut(s) | 24, 66, 106, 108, 236, 389, 399, 462 |
| Lsp1109I | GCAGC | 1 cut(s) | 468 |
| MaeI | CTAG | 1 cut(s) | 426 |
| MaeII | ACGT | 1 cut(s) | 86 |
| MaeIII | GTNAC | 3 cut(s) | 76, 212, 350 |
| MalI | GATC | 2 cut(s) | 42, 174 |
| MboI | GATC | 2 cut(s) | 40, 172 |
| MboII | GAAGA | 1 cut(s) | 467 |
| MluCI | AATT | 5 cut(s) | 5, 163, 310, 321, 514 |
| MlyI | GAGTC | 2 cut(s) | 416, 416 |
| MmeI | TCCRAC | 1 cut(s) | 270 |
| MnlI | CCTC | 8 cut(s) | 31, 64, 110, 131, 331, 370, 391, 412 |
| MslI | CAYNNNNRTG | 1 cut(s) | 272 |
| MspA1I | CMGCKG | 1 cut(s) | 413 |
| MspI | CCGG | 1 cut(s) | 11 |
| MvnI | CGCG | 1 cut(s) | 39 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 100, 109, 260 |
| NdeI | CATATG | 1 cut(s) | 334 |
| NdeII | GATC | 2 cut(s) | 40, 172 |
| NlaIII | CATG | 3 cut(s) | 271, 376, 476 |
| NmuCI | GTSAC | 2 cut(s) | 76, 350 |
| NruI | TCGCGA | 1 cut(s) | 39 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 217 |
| PfeI | GAWTC | 3 cut(s) | 145, 203, 501 |
| PkrI | GCNGC | 1 cut(s) | 483 |
| PleI | GAGTC | 2 cut(s) | 415, 416 |
| PpsI | GAGTC | 2 cut(s) | 415, 416 |
| PspFI | CCCAGC | 1 cut(s) | 413 |
| PspPI | GGNCC | 1 cut(s) | 18 |
| PvuII | CAGCTG | 1 cut(s) | 413 |
| RruI | TCGCGA | 1 cut(s) | 39 |
| RsaI | GTAC | 3 cut(s) | 57, 443, 525 |
| RsaNI | GTAC | 3 cut(s) | 56, 442, 524 |
| RseI | CAYNNNNRTG | 1 cut(s) | 272 |
| SatI | GCNGC | 1 cut(s) | 482 |
| Sau3AI | GATC | 2 cut(s) | 40, 172 |
| Sau96I | GGNCC | 1 cut(s) | 18 |
| SchI | GAGTC | 2 cut(s) | 416, 416 |
| SetI | ASST | 7 cut(s) | 23, 89, 129, 415, 451, 483, 540 |
| SinI | GGWCC | 1 cut(s) | 18 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 272 |
| Sse9I | AATT | 5 cut(s) | 5, 163, 310, 321, 514 |
| SspMI | CTAG | 1 cut(s) | 426 |
| TaaI | ACNGT | 1 cut(s) | 274 |
| TaiI | ACGT | 1 cut(s) | 89 |
| TaqI | TCGA | 1 cut(s) | 179 |
| TasI | AATT | 5 cut(s) | 5, 163, 310, 321, 514 |
| TatI | WGTACW | 1 cut(s) | 441 |
| TfiI | GAWTC | 3 cut(s) | 145, 203, 501 |
| TscAI | CASTG | 1 cut(s) | 396 |
| TseFI | GTSAC | 2 cut(s) | 76, 350 |
| TseI | GCWGC | 1 cut(s) | 481 |
| Tsp45I | GTSAC | 2 cut(s) | 76, 350 |
| TspDTI | ATGAA | 1 cut(s) | 483 |
| TspGWI | ACGGA | 2 cut(s) | 209, 369 |
| TspRI | CASTG | 1 cut(s) | 396 |
| VpaK11BI | GGWCC | 1 cut(s) | 18 |
| XspI | CTAG | 1 cut(s) | 426 |
| ZraI | GACGTC | 1 cut(s) | 87 |