Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003179.1

Orthogroup ID

OG0002876

Physical Location & Seq

Genomic Coordinates Forward (+)

127471 .. 133864

Gene Structure 6394 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003179.1_g000029.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

atggcttcaggaagtggatcacaccgtccaatgcagttgggaaggcagccgtgtttcatccaagttgtgaggagcccgtcaaagaacacggagagtttggtcatccctcctccatttgtgatagagttcatgaatggtgacagatgccggcagggaaagataaaactggaaggattggaacagtgccagtggcgggttgaaataaatacggatgggaggggagttgaattgggtgaagggtgggcggaatttgtgggggaaaatttggaggacgggtggatgctagtgctgttaaggtacgagggggcaatgactttttctgccaggagatatggccggtcaggagctctgatggtgacggcaccaagggggagacagacagaggagacaccacgtggagttaggggcatttatccatcatttgcacagttggttattcgaggtggaatgaacagcgaagtactggaaataccagcagggatctttcgtggagggtcaagtcgaaccacgattgaaagtaaggtttggttgaataatatgaattgggggatgtcgtgcaatgcacggatcaaggtaagtgaggatggaggagtcataaaaggaggttgggacaggtgggtgagtgcaaacattgtaagggtatgcaagtggtgcattgtggattgtaatcgttcaaaaaatgaggcaactgtgatggtgtttctgcaatgtggaggggtgatgtcgaacgtggcaatgatgaatgccgtaacaatcggtgatgctatgtacgttgatagttgtgatgaagaatatctaaatgattcagaggaagaggaggaagatctgcctgatgaaggagaagctggtcatatggtacagtttccaatacctcaaactgtgatccgagttggaaaaaaatatgggcaacttcccacagagtatgcaaagcaatatttcccgggtgtcggtagtcgtcaggttgttgtgaggactggagatggacaatcatgggaggtttcatttttgaagtcaaatgaaacatataggttcagcggagggtttgtggaactaaggaaagaatatgggctgaaggtggaaaacaaatgcaagggtgatgtcatgttgcagctgcttcaagttagcgcccgacatgcatttatcaaggcccgggaccaagcccgaaatgttcgggtcgggcccaaatttcattttccagcttcagggaccagaaaggcccggaccagaaaagaatgggctggtccttcggaggaatctgaaacagatagtgaagagtcagatgttagtggttcagatggggatgacacatcttggatatcatggttttgcaatttgagaggaaatgagtttttttgtgaagttgatgatgattatatacaagatgatttcaacctttgtgggctaagcagccaagttccgtattatgattatgcacttgatttgatcttggatgttgagtcttcacatggtgatatgtttacggaagaacaaaatgaattaattgaatcagcagcggagatgctctatggtctgattcatgtacgatatattttgaccagcaagggcatggctgccatgctagacaaatacaaaaactatgatttcgggagatgtccaagagtgtactgctgtggacaaccctgcctcccagttggccaatcagacatcccacggtcaagcactgtaaaaatatactgccccaagtgtgaagatatctactaccctcgatcgaagtatcaaggtagtatcctttgtatttataattctgcatttgaaactgctggctgcgtataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 ko04064 ko04137 ko04139 ko04310 ko04520 ko04712 ko05162 ko05168 ko05169 map03008 map04064 map04137 map04139 map04310 map04520 map04712 map05162 map05168 map05169

Pfam Domains

Protein Families

CK_II_beta

Protein Analysis

597

Amino Acids

66.98

Weight (kDa)

5.14

Isoelectric Point (pI)

45.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002876)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr1g0313861
rosa_laevigata	RLG00000000965
rosa_multiflora	Rmu_co8273039.1_g000001 Rmu_sc0000931.1_g000012 Rmu_sc0002045.1_g000026 Rmu_sc0003179.1_g000029 Rmu_sc0006198.1_g000015
rosa_roxburghii	Rroxscaffold_1G00068970 Rroxscaffold_1G00068980 Rroxscaffold_1G00068990 Rroxscaffold_2G00129080 Rroxscaffold_2G00129090 Rroxscaffold_4G00309350 Rroxscaffold_7G00162680 Rroxscaffold_7G00162690
rosa_samantha	Rh1AG005200 Rh1AG007200 Rh1AG007300 Rh1CG040300 Rh1CG040400 Rh1DG029100 Rh2AG353600 Rh3BG122100 Rh5AG305400 Rh5CG248700 Rh5CG248900 Rh5CG249000 Rh6BG075500 Rh6BG075600 Rh6CG151700 Rh7DG361800 Rh7DG361900 Rh7DG362800 Rh7DG363700 Rh7DG363800 Rh7DG364100
rosa_wichuraiana	Rw1G000280 Rw1G010450 Rw6G013480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1761
AccB1I	GGYRCC	1 cut(s)	361
AciI	CCGC	4 cut(s)	193, 245, 1035, 1514
AclWI	GGATC	4 cut(s)	25, 488, 575, 877
AcoI	YGGCCR	2 cut(s)	334, 1654
AcsI	RAATTY	3 cut(s)	248, 262, 1184
AcuI	CTGAAG	2 cut(s)	1091, 1185
AcvI	CACGTG	1 cut(s)	395
AdeI	CACNNNGTG	2 cut(s)	395, 1469
AfaI	GTAC	6 cut(s)	299, 462, 770, 858, 1542, 1625
AfiI	CCNNNNNNNGG	4 cut(s)	193, 836, 947, 1202
AjnI	CCWGG	1 cut(s)	323
AluBI	AGCT	4 cut(s)	347, 845, 1111, 1199
AluI	AGCT	4 cut(s)	347, 845, 1111, 1199
Alw21I	GWGCWC	1 cut(s)	349
Alw26I	GTCTC	2 cut(s)	367, 380
AlwI	GGATC	4 cut(s)	25, 488, 575, 877
Ama87I	CYCGRG	2 cut(s)	940, 1149
AoxI	GGCC	5 cut(s)	334, 1146, 1178, 1215, 1654
ApaI	GGGCCC	1 cut(s)	1182
ApeKI	GCWGC	7 cut(s)	46, 1108, 1111, 1407, 1511, 1571, 1785
ApoI	RAATTY	3 cut(s)	248, 262, 1184
AseI	ATTAAT	1 cut(s)	1499
AspLEI	GCGC	1 cut(s)	1127
AspS9I	GGNCC	8 cut(s)	1147, 1153, 1178, 1179, 1206, 1216, 1221, 1241
AsuC2I	CCSGG	5 cut(s)	941, 942, 1150, 1151, 1219
AsuHPI	GGTGA	8 cut(s)	149, 245, 367, 631, 730, 770, 1106, 1481
AvaI	CYCGRG	2 cut(s)	940, 1149
AvaII	GGWCC	4 cut(s)	1153, 1206, 1221, 1241
BaeGI	GKGCMC	1 cut(s)	1182
BalI	TGGCCA	1 cut(s)	1656
BanI	GGYRCC	1 cut(s)	361
BanII	GRGCYC	3 cut(s)	77, 349, 1182
BbrPI	CACGTG	1 cut(s)	395
BbsI	GAAGAC	1 cut(s)	1452
Bbv12I	GWGCWC	1 cut(s)	349
BbvI	GCAGC	7 cut(s)	58, 1098, 1120, 1419, 1523, 1558, 1772
BccI	CCATC	7 cut(s)	206, 346, 424, 578, 688, 974, 1289
BceAI	ACGGC	3 cut(s)	34, 375, 731
BciT130I	CCWGG	1 cut(s)	325
BciVI	GTATCC	1 cut(s)	1757
BcnI	CCSGG	5 cut(s)	941, 942, 1150, 1151, 1219
BcoDI	GTCTC	2 cut(s)	367, 380
BfaI	CTAG	2 cut(s)	284, 1580
BfoI	RGCGCY	1 cut(s)	1128
BfuI	GTATCC	1 cut(s)	1757
BglII	AGATCT	1 cut(s)	823
BisI	GCNGC	7 cut(s)	47, 1109, 1112, 1408, 1512, 1572, 1786
BlpI	GCTNAGC	1 cut(s)	1403
BlsI	GCNGC	7 cut(s)	48, 1110, 1113, 1409, 1513, 1573, 1787
BmcAI	AGTACT	1 cut(s)	462
Bme1390I	CCNGG	6 cut(s)	325, 941, 942, 1150, 1151, 1219
Bme18I	GGWCC	4 cut(s)	1153, 1206, 1221, 1241
BmeT110I	CYCGRG	2 cut(s)	940, 1149
BmgT120I	GGNCC	8 cut(s)	1147, 1153, 1178, 1179, 1206, 1216, 1221, 1241
BmiI	GGNNCC	5 cut(s)	74, 363, 1154, 1180, 1207
BmrFI	CCNGG	6 cut(s)	325, 941, 942, 1150, 1151, 1219
BmrI	ACTGGG	1 cut(s)	1643
BmsI	GCATC	4 cut(s)	134, 270, 751, 1509
BmuI	ACTGGG	1 cut(s)	1643
BpiI	GAAGAC	1 cut(s)	1452
BpmI	CTGGAG	1 cut(s)	996
Bpu1102I	GCTNAGC	1 cut(s)	1403
BpuMI	CCSGG	5 cut(s)	941, 942, 1150, 1151, 1219
BsaAI	YACGTR	1 cut(s)	395
BsaBI	GATNNNNATC	1 cut(s)	666
BsaJI	CCNNGG	4 cut(s)	365, 940, 1149, 1670
BsaXI	ACNNNNNCTCC	6 cut(s)	260, 290, 1029, 1059, 1629, 1659
Bsc4I	CCNNNNNNNGG	4 cut(s)	193, 836, 947, 1202
Bse118I	RCCGGY	2 cut(s)	147, 336
Bse1I	ACTGG	5 cut(s)	171, 187, 468, 979, 1649
Bse3DI	GCAATG	4 cut(s)	315, 565, 713, 741
Bse8I	GATNNNNATC	1 cut(s)	666
BseBI	CCWGG	1 cut(s)	325
BseDI	CCNNGG	4 cut(s)	365, 940, 1149, 1670
BseGI	GGATG	9 cut(s)	57, 102, 217, 285, 555, 589, 1306, 1456, 1665
BseJI	GATNNNNATC	1 cut(s)	666
BseLI	CCNNNNNNNGG	4 cut(s)	193, 836, 947, 1202
BseMI	GCAATG	4 cut(s)	315, 565, 713, 741
BseNI	ACTGG	5 cut(s)	171, 187, 468, 979, 1649
BseRI	GAGGAG	5 cut(s)	85, 99, 398, 603, 830
BseSI	GKGCMC	1 cut(s)	1182
BseXI	GCAGC	7 cut(s)	58, 1098, 1120, 1419, 1523, 1558, 1772
Bsh1285I	CGRYCG	1 cut(s)	1730
BshFI	GGCC	5 cut(s)	336, 1148, 1180, 1217, 1656
BshNI	GGYRCC	1 cut(s)	361
BsiEI	CGRYCG	1 cut(s)	1730
BsiHKAI	GWGCWC	1 cut(s)	349
BsiHKCI	CYCGRG	2 cut(s)	940, 1149
BsiSI	CCGG	5 cut(s)	148, 337, 941, 1150, 1219
BslFI	GGGAC	3 cut(s)	623, 1166, 1219
BslI	CCNNNNNNNGG	4 cut(s)	193, 836, 947, 1202
BsmAI	GTCTC	2 cut(s)	367, 380
BsmFI	GGGAC	3 cut(s)	623, 1166, 1219
BsmI	GAATGC	1 cut(s)	748
BsnI	GGCC	5 cut(s)	336, 1148, 1180, 1217, 1656
BsoBI	CYCGRG	2 cut(s)	940, 1149
Bsp120I	GGGCCC	1 cut(s)	1178
Bsp1286I	GDGCHC	3 cut(s)	77, 349, 1182
Bsp143I	GATC	7 cut(s)	17, 480, 567, 823, 882, 1443, 1727
Bsp1720I	GCTNAGC	1 cut(s)	1403
BspACI	CCGC	4 cut(s)	193, 245, 1035, 1514
BspANI	GGCC	5 cut(s)	336, 1148, 1180, 1217, 1656
BspHI	TCATGA	1 cut(s)	129
BspLI	GGNNCC	5 cut(s)	74, 363, 1154, 1180, 1207
BspPI	GGATC	4 cut(s)	25, 488, 575, 877
BspT107I	GGYRCC	1 cut(s)	361
BsrDI	GCAATG	4 cut(s)	315, 565, 713, 741
BsrFI	RCCGGY	2 cut(s)	147, 336
BsrI	ACTGG	5 cut(s)	171, 187, 468, 979, 1649
BssAI	RCCGGY	2 cut(s)	147, 336
BssECI	CCNNGG	4 cut(s)	365, 940, 1149, 1670
BssMI	GATC	7 cut(s)	17, 480, 567, 823, 882, 1443, 1727
BssT1I	CCWWGG	1 cut(s)	365
Bst2UI	CCWGG	1 cut(s)	325
Bst4CI	ACNGT	8 cut(s)	26, 183, 429, 691, 861, 880, 1674, 1684
Bst6I	CTCTTC	2 cut(s)	807, 1266
BstAPI	GCANNNNNTGC	1 cut(s)	651
BstBAI	YACGTR	1 cut(s)	395
BstC8I	GCNNGC	2 cut(s)	149, 1783
BstDEI	CTNAG	2 cut(s)	1052, 1403
BstDSI	CCRYGG	1 cut(s)	1670
BstENI	CCTNNNNNAGG	1 cut(s)	834
BstF5I	GGATG	9 cut(s)	57, 102, 217, 285, 555, 589, 1306, 1456, 1665
BstH2I	RGCGCY	1 cut(s)	1128
BstHHI	GCGC	1 cut(s)	1127
BstKTI	GATC	7 cut(s)	20, 483, 570, 826, 885, 1446, 1730
BstMAI	GTCTC	2 cut(s)	367, 380
BstMBI	GATC	7 cut(s)	17, 480, 567, 823, 882, 1443, 1727
BstMCI	CGRYCG	1 cut(s)	1730
BstMWI	GCNNNNNNNGC	2 cut(s)	651, 1133
BstNI	CCWGG	1 cut(s)	325
BstNSI	RCATGY	1 cut(s)	1136
BstSCI	CCNGG	6 cut(s)	323, 939, 940, 1148, 1149, 1217
BstSLI	GKGCMC	1 cut(s)	1182
BstV1I	GCAGC	7 cut(s)	58, 1098, 1120, 1419, 1523, 1558, 1772
BstV2I	GAAGAC	1 cut(s)	1452
BstX2I	RGATCY	2 cut(s)	480, 823
BstYI	RGATCY	2 cut(s)	480, 823
BsuI	GTATCC	1 cut(s)	1757
BsuRI	GGCC	5 cut(s)	336, 1148, 1180, 1217, 1656
BtgI	CCRYGG	1 cut(s)	1670
BtsCI	GGATG	9 cut(s)	57, 102, 217, 285, 555, 589, 1306, 1456, 1665
BtsIMutI	CAGTG	3 cut(s)	188, 194, 1680
Cac8I	GCNNGC	2 cut(s)	149, 1783
CciI	TCATGA	1 cut(s)	129
CfoI	GCGC	1 cut(s)	1127
Cfr10I	RCCGGY	2 cut(s)	147, 336
Cfr13I	GGNCC	8 cut(s)	1147, 1153, 1178, 1179, 1206, 1216, 1221, 1241
Cfr9I	CCCGGG	2 cut(s)	940, 1149
Csp6I	GTAC	6 cut(s)	298, 461, 769, 857, 1541, 1624
CspCI	CAANNNNNGTGG	2 cut(s)	1378, 1413
CviAII	CATG	9 cut(s)	130, 990, 1102, 1133, 1320, 1466, 1538, 1567, 1576
CviQI	GTAC	6 cut(s)	298, 461, 769, 857, 1541, 1624
DdeI	CTNAG	2 cut(s)	1052, 1403
DpnI	GATC	7 cut(s)	19, 482, 569, 825, 884, 1445, 1729
DpnII	GATC	7 cut(s)	17, 480, 567, 823, 882, 1443, 1727
DraIII	CACNNNGTG	2 cut(s)	395, 1469
EaeI	YGGCCR	2 cut(s)	334, 1654
Eam1104I	CTCTTC	2 cut(s)	807, 1266
EarI	CTCTTC	2 cut(s)	807, 1266
EciI	GGCGGA	1 cut(s)	260
Ecl136II	GAGCTC	1 cut(s)	347
Eco130I	CCWWGG	1 cut(s)	365
Eco24I	GRGCYC	3 cut(s)	77, 349, 1182
Eco32I	GATATC	2 cut(s)	1317, 1714
Eco47I	GGWCC	4 cut(s)	1153, 1206, 1221, 1241
Eco53kI	GAGCTC	1 cut(s)	347
Eco57I	CTGAAG	2 cut(s)	1091, 1185
Eco72I	CACGTG	1 cut(s)	395
Eco88I	CYCGRG	2 cut(s)	940, 1149
EcoICRI	GAGCTC	1 cut(s)	347
EcoNI	CCTNNNNNAGG	1 cut(s)	834
EcoRII	CCWGG	1 cut(s)	323
EcoRV	GATATC	2 cut(s)	1317, 1714
EcoT14I	CCWWGG	1 cut(s)	365
EcoT22I	ATGCAT	1 cut(s)	1138
EcoT38I	GRGCYC	3 cut(s)	77, 349, 1182
ErhI	CCWWGG	1 cut(s)	365
FaeI	CATG	9 cut(s)	133, 993, 1105, 1136, 1323, 1469, 1541, 1570, 1579
FaqI	GGGAC	3 cut(s)	623, 1166, 1219
FatI	CATG	9 cut(s)	129, 989, 1101, 1132, 1319, 1465, 1537, 1566, 1575
FauI	CCCGC	1 cut(s)	186
FauNDI	CATATG	1 cut(s)	852
Fnu4HI	GCNGC	7 cut(s)	47, 1109, 1112, 1408, 1512, 1572, 1786
FokI	GGATG	9 cut(s)	44, 89, 224, 292, 562, 596, 1313, 1463, 1652
FriOI	GRGCYC	3 cut(s)	77, 349, 1182
Fsp4HI	GCNGC	7 cut(s)	47, 1109, 1112, 1408, 1512, 1572, 1786
FspBI	CTAG	2 cut(s)	284, 1580
GlaI	GCGC	1 cut(s)	1126
GluI	GCNGC	7 cut(s)	47, 1109, 1112, 1408, 1512, 1572, 1786
GsuI	CTGGAG	1 cut(s)	996
HaeII	RGCGCY	1 cut(s)	1128
HaeIII	GGCC	5 cut(s)	336, 1148, 1180, 1217, 1656
HapII	CCGG	5 cut(s)	148, 337, 941, 1150, 1219
HhaI	GCGC	1 cut(s)	1127
Hin1II	CATG	9 cut(s)	133, 993, 1105, 1136, 1323, 1469, 1541, 1570, 1579
Hin6I	GCGC	1 cut(s)	1125
HinP1I	GCGC	1 cut(s)	1125
HinfI	GANTC	7 cut(s)	591, 803, 1253, 1274, 1457, 1505, 1534
HpaII	CCGG	5 cut(s)	148, 337, 941, 1150, 1219
HphI	GGTGA	8 cut(s)	149, 245, 367, 631, 730, 770, 1106, 1481
Hpy166II	GTNNAC	3 cut(s)	1479, 1624, 1634
Hpy188I	TCNGA	9 cut(s)	351, 808, 887, 1249, 1258, 1279, 1294, 1533, 1663
Hpy188III	TCNNGA	4 cut(s)	9, 130, 342, 1606
Hpy8I	GTNNAC	3 cut(s)	1479, 1624, 1634
HpyAV	CCTTC	6 cut(s)	36, 164, 230, 830, 1066, 1254
HpyCH4III	ACNGT	8 cut(s)	26, 183, 429, 691, 861, 880, 1674, 1684
HpyCH4IV	ACGT	3 cut(s)	394, 729, 771
HpyF10VI	GCNNNNNNNGC	2 cut(s)	651, 1133
HpyF3I	CTNAG	2 cut(s)	1052, 1403
HpySE526I	ACGT	3 cut(s)	394, 729, 771
Hsp92II	CATG	9 cut(s)	133, 993, 1105, 1136, 1323, 1469, 1541, 1570, 1579
HspAI	GCGC	1 cut(s)	1125
KroI	GCCGGC	1 cut(s)	147
KroNI	GCCGGC	1 cut(s)	149
Kzo9I	GATC	7 cut(s)	17, 480, 567, 823, 882, 1443, 1727
LmnI	GCTCC	2 cut(s)	72, 344
Lsp1109I	GCAGC	7 cut(s)	58, 1098, 1120, 1419, 1523, 1558, 1772
LweI	GCATC	4 cut(s)	134, 270, 751, 1509
MaeI	CTAG	2 cut(s)	284, 1580
MaeII	ACGT	3 cut(s)	394, 729, 771
MaeIII	GTNAC	3 cut(s)	137, 355, 748
MalI	GATC	7 cut(s)	19, 482, 569, 825, 884, 1445, 1729
MboI	GATC	7 cut(s)	17, 480, 567, 823, 882, 1443, 1727
MboII	GAAGA	7 cut(s)	800, 824, 833, 1283, 1452, 1496, 1721
MflI	RGATCY	2 cut(s)	480, 823
MhlI	GDGCHC	3 cut(s)	77, 349, 1182
MlsI	TGGCCA	1 cut(s)	1656
MluCI	AATT	9 cut(s)	227, 248, 262, 541, 1184, 1330, 1496, 1500, 1762
MluNI	TGGCCA	1 cut(s)	1656
MlyI	GAGTC	3 cut(s)	600, 1283, 1466
MmeI	TCCRAC	1 cut(s)	871
Mox20I	TGGCCA	1 cut(s)	1656
Mph1103I	ATGCAT	1 cut(s)	1138
MroNI	GCCGGC	1 cut(s)	147
MscI	TGGCCA	1 cut(s)	1656
MseI	TTAA	2 cut(s)	293, 1499
Msp20I	TGGCCA	1 cut(s)	1656
MspA1I	CMGCKG	3 cut(s)	1035, 1111, 1514
MspI	CCGG	5 cut(s)	148, 337, 941, 1150, 1219
MspR9I	CCNGG	6 cut(s)	325, 941, 942, 1150, 1151, 1219
Mva1269I	GAATGC	1 cut(s)	748
MvaI	CCWGG	1 cut(s)	325
MwoI	GCNNNNNNNGC	2 cut(s)	651, 1133
NaeI	GCCGGC	1 cut(s)	149
NciI	CCSGG	5 cut(s)	941, 942, 1150, 1151, 1219
NdeI	CATATG	1 cut(s)	852
NdeII	GATC	7 cut(s)	17, 480, 567, 823, 882, 1443, 1727
NgoMIV	GCCGGC	1 cut(s)	147
NlaIII	CATG	9 cut(s)	133, 993, 1105, 1136, 1323, 1469, 1541, 1570, 1579
NlaIV	GGNNCC	5 cut(s)	74, 363, 1154, 1180, 1207
NmuCI	GTSAC	2 cut(s)	137, 355
NsiI	ATGCAT	1 cut(s)	1138
NspI	RCATGY	1 cut(s)	1136
PagI	TCATGA	1 cut(s)	129
PctI	GAATGC	1 cut(s)	748
PdiI	GCCGGC	1 cut(s)	149
PfeI	GAWTC	4 cut(s)	803, 1253, 1505, 1534
PkrI	GCNGC	7 cut(s)	48, 1110, 1113, 1409, 1513, 1573, 1787
Ple19I	CGATCG	1 cut(s)	1730
PleI	GAGTC	3 cut(s)	599, 1282, 1465
PmaCI	CACGTG	1 cut(s)	395
PmlI	CACGTG	1 cut(s)	395
PpsI	GAGTC	3 cut(s)	599, 1282, 1465
Ppu21I	YACGTR	1 cut(s)	395
PshBI	ATTAAT	1 cut(s)	1499
PsiI	TTATAA	1 cut(s)	1761
Psp124BI	GAGCTC	1 cut(s)	349
Psp6I	CCWGG	1 cut(s)	323
PspCI	CACGTG	1 cut(s)	395
PspGI	CCWGG	1 cut(s)	323
PspN4I	GGNNCC	5 cut(s)	74, 363, 1154, 1180, 1207
PspOMI	GGGCCC	1 cut(s)	1178
PspPI	GGNCC	8 cut(s)	1147, 1153, 1178, 1179, 1206, 1216, 1221, 1241
PsuI	RGATCY	2 cut(s)	480, 823
PvuI	CGATCG	1 cut(s)	1730
PvuII	CAGCTG	1 cut(s)	1111
RsaI	GTAC	6 cut(s)	299, 462, 770, 858, 1542, 1625
RsaNI	GTAC	6 cut(s)	298, 461, 769, 857, 1541, 1624
SacI	GAGCTC	1 cut(s)	349
SaqAI	TTAA	2 cut(s)	293, 1499
SatI	GCNGC	7 cut(s)	47, 1109, 1112, 1408, 1512, 1572, 1786
Sau3AI	GATC	7 cut(s)	17, 480, 567, 823, 882, 1443, 1727
Sau96I	GGNCC	8 cut(s)	1147, 1153, 1178, 1179, 1206, 1216, 1221, 1241
ScaI	AGTACT	1 cut(s)	462
SchI	GAGTC	3 cut(s)	600, 1283, 1466
ScrFI	CCNGG	6 cut(s)	325, 941, 942, 1150, 1151, 1219
SduI	GDGCHC	3 cut(s)	77, 349, 1182
SfaNI	GCATC	4 cut(s)	134, 270, 751, 1509
SinI	GGWCC	4 cut(s)	1153, 1206, 1221, 1241
SmaI	CCCGGG	2 cut(s)	942, 1151
Sse9I	AATT	9 cut(s)	227, 248, 262, 541, 1184, 1330, 1496, 1500, 1762
SsiI	CCGC	4 cut(s)	193, 245, 1035, 1514
SspI	AATATT	1 cut(s)	935
SspMI	CTAG	2 cut(s)	284, 1580
SstI	GAGCTC	1 cut(s)	349
StyD4I	CCNGG	6 cut(s)	323, 939, 940, 1148, 1149, 1217
StyI	CCWWGG	1 cut(s)	365
TaaI	ACNGT	8 cut(s)	26, 183, 429, 691, 861, 880, 1674, 1684
TaiI	ACGT	3 cut(s)	397, 732, 774
TaqI	TCGA	5 cut(s)	439, 502, 725, 1726, 1730
TasI	AATT	9 cut(s)	227, 248, 262, 541, 1184, 1330, 1496, 1500, 1762
TatI	WGTACW	2 cut(s)	460, 1623
TfiI	GAWTC	4 cut(s)	803, 1253, 1505, 1534
Tru1I	TTAA	2 cut(s)	293, 1499
Tru9I	TTAA	2 cut(s)	293, 1499
TscAI	CASTG	3 cut(s)	188, 194, 1687
TseFI	GTSAC	2 cut(s)	137, 355
TseI	GCWGC	7 cut(s)	46, 1108, 1111, 1407, 1511, 1571, 1785
Tsp45I	GTSAC	2 cut(s)	137, 355
TspGWI	ACGGA	5 cut(s)	104, 224, 580, 1407, 1496
TspMI	CCCGGG	2 cut(s)	940, 1149
TspRI	CASTG	3 cut(s)	188, 194, 1687
VpaK11BI	GGWCC	4 cut(s)	1153, 1206, 1221, 1241
VspI	ATTAAT	1 cut(s)	1499
XagI	CCTNNNNNAGG	1 cut(s)	834
XapI	RAATTY	3 cut(s)	248, 262, 1184
XceI	RCATGY	1 cut(s)	1136
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1564
XmaI	CCCGGG	2 cut(s)	940, 1149
XspI	CTAG	2 cut(s)	284, 1580
ZrmI	AGTACT	1 cut(s)	462
Zsp2I	ATGCAT	1 cut(s)	1138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.