RLG00000026588

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
4072793 .. 4073533
741 bp
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UTR
Exon/CDS
Intron
RLM00000026588

Sequence Viewer

Length: 444 bp
ATGGGCAAGAAGTTGAAGGTGTTGATGCAGAAGTTGAAAGTTGAGAAACTTTTAGGGCAAGGTAACTTTGCAAAGGTCTATAGCGCAACGAACCTTGAAACCAATCAGAGTGTAGCCATTAAGGTCATCAGCAAAGACATGGTTGTCAAAACTGGACTGATTGATCAGACCAAAAGAGAGATTACTGCTATGAGATTGCTTAAACACCCAAACATAGTGCAGCTATATGAAGTCATGGCCTCCAAAGCCAAGATCTACCTTGTCAATGAATACGCAAAAGGCGGTGAGCTTTTTCAAAAGATAAAGAAAGGAAGGCTCAAGGAGGAAGTTGCATGGAATTACTTCCAACAGCTCATCACTGCTGTTGATTTCTGCCACAAAAGAGGTGTTTACCACCGCGATTTGAAGCCCGAGAACTTGCTGCTAGATGAAATGGAGTGTTGA

Protein Analysis

148

Amino Acids

16.94

Weight (kDa)

9.58

Isoelectric Point (pI)

15.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 12 - 145 1.6e-22 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 13 - 144 2.1e-40 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 143
AccII CGCG 1 cut(s) 399
AciI CCGC 2 cut(s) 282, 397
AgsI TTSAA 5 cut(s) 16, 37, 98, 296, 406
AluBI AGCT 3 cut(s) 223, 289, 352
AluI AGCT 3 cut(s) 223, 289, 352
Ama87I CYCGRG 1 cut(s) 410
AoxI GGCC 1 cut(s) 237
ApeKI GCWGC 2 cut(s) 220, 421
Asp700I GAANNNNTTC 1 cut(s) 341
AspLEI GCGC 1 cut(s) 86
AsuHPI GGTGA 1 cut(s) 296
AvaI CYCGRG 1 cut(s) 410
BbvI GCAGC 2 cut(s) 232, 408
BclI TGATCA 1 cut(s) 163
BfaI CTAG 1 cut(s) 425
BfmI CTRYAG 1 cut(s) 79
BglII AGATCT 1 cut(s) 252
BisI GCNGC 2 cut(s) 221, 422
BlsI GCNGC 2 cut(s) 222, 423
BmeT110I CYCGRG 1 cut(s) 410
BmsI GCATC 1 cut(s) 15
BpuEI CTTGAG 1 cut(s) 302
Bse1I ACTGG 1 cut(s) 157
BseNI ACTGG 1 cut(s) 157
BseXI GCAGC 2 cut(s) 232, 408
BsgI GTGCAG 1 cut(s) 239
Bsh1236I CGCG 1 cut(s) 399
BshFI GGCC 1 cut(s) 239
BsiHKCI CYCGRG 1 cut(s) 410
BsnI GGCC 1 cut(s) 239
BsoBI CYCGRG 1 cut(s) 410
Bsp143I GATC 2 cut(s) 163, 252
BspACI CCGC 2 cut(s) 282, 397
BspANI GGCC 1 cut(s) 239
BspFNI CGCG 1 cut(s) 399
BsrI ACTGG 1 cut(s) 157
BssMI GATC 2 cut(s) 163, 252
BstFNI CGCG 1 cut(s) 399
BstHHI GCGC 1 cut(s) 86
BstKTI GATC 2 cut(s) 166, 255
BstMBI GATC 2 cut(s) 163, 252
BstMWI GCNNNNNNNGC 1 cut(s) 245
BstSFI CTRYAG 1 cut(s) 79
BstUI CGCG 1 cut(s) 399
BstV1I GCAGC 2 cut(s) 232, 408
BstX2I RGATCY 1 cut(s) 252
BstYI RGATCY 1 cut(s) 252
BsuRI GGCC 1 cut(s) 239
BtsI GCAGTG 1 cut(s) 357
BtsIMutI CAGTG 1 cut(s) 357
CfoI GCGC 1 cut(s) 86
CviAII CATG 3 cut(s) 139, 235, 333
CviJI RGCY 8 cut(s) 116, 223, 239, 248, 289, 316, 352, 409
CviKI_1 RGCY 8 cut(s) 116, 223, 239, 248, 289, 316, 352, 409
DpnI GATC 2 cut(s) 165, 254
DpnII GATC 2 cut(s) 163, 252
DrdI GACNNNNNNGTC 1 cut(s) 143
DseDI GACNNNNNNGTC 1 cut(s) 143
Eco88I CYCGRG 1 cut(s) 410
FaeI CATG 3 cut(s) 142, 238, 336
FaiI YATR 8 cut(s) 81, 140, 191, 215, 226, 228, 236, 334
FatI CATG 3 cut(s) 138, 234, 332
FbaI TGATCA 1 cut(s) 163
Fnu4HI GCNGC 2 cut(s) 221, 422
Fsp4HI GCNGC 2 cut(s) 221, 422
FspBI CTAG 1 cut(s) 425
GlaI GCGC 1 cut(s) 85
GluI GCNGC 2 cut(s) 221, 422
HaeIII GGCC 1 cut(s) 239
HhaI GCGC 1 cut(s) 86
Hin1II CATG 3 cut(s) 142, 238, 336
Hin6I GCGC 1 cut(s) 84
HinP1I GCGC 1 cut(s) 84
HphI GGTGA 1 cut(s) 296
Hpy166II GTNNAC 1 cut(s) 391
Hpy188I TCNGA 2 cut(s) 108, 168
Hpy8I GTNNAC 1 cut(s) 391
HpyAV CCTTC 2 cut(s) 10, 306
HpyCH4V TGCA 4 cut(s) 28, 71, 220, 332
HpyF10VI GCNNNNNNNGC 1 cut(s) 245
Hsp92II CATG 3 cut(s) 142, 238, 336
HspAI GCGC 1 cut(s) 84
Ksp22I TGATCA 1 cut(s) 163
Kzo9I GATC 2 cut(s) 163, 252
LpnPI CCDG 1 cut(s) 138
Lsp1109I GCAGC 2 cut(s) 232, 408
LweI GCATC 1 cut(s) 15
MaeI CTAG 1 cut(s) 425
MaeIII GTNAC 1 cut(s) 62
MalI GATC 2 cut(s) 165, 254
MboI GATC 2 cut(s) 163, 252
MflI RGATCY 1 cut(s) 252
MluCI AATT 1 cut(s) 337
MmeI TCCRAC 1 cut(s) 370
MnlI CCTC 3 cut(s) 250, 316, 377
MroXI GAANNNNTTC 1 cut(s) 341
MseI TTAA 2 cut(s) 120, 201
MvnI CGCG 1 cut(s) 399
MwoI GCNNNNNNNGC 1 cut(s) 245
NdeII GATC 2 cut(s) 163, 252
NlaIII CATG 3 cut(s) 142, 238, 336
PdmI GAANNNNTTC 1 cut(s) 341
PkrI GCNGC 2 cut(s) 222, 423
PsuI RGATCY 1 cut(s) 252
SaqAI TTAA 2 cut(s) 120, 201
SatI GCNGC 2 cut(s) 221, 422
Sau3AI GATC 2 cut(s) 163, 252
SfaNI GCATC 1 cut(s) 15
SfcI CTRYAG 1 cut(s) 79
SmlI CTYRAG 1 cut(s) 317
SmoI CTYRAG 1 cut(s) 317
Sse9I AATT 1 cut(s) 337
SsiI CCGC 2 cut(s) 282, 397
SspMI CTAG 1 cut(s) 425
TasI AATT 1 cut(s) 337
Tru1I TTAA 2 cut(s) 120, 201
Tru9I TTAA 2 cut(s) 120, 201
TscAI CASTG 1 cut(s) 364
TseI GCWGC 2 cut(s) 220, 421
TspDTI ATGAA 3 cut(s) 243, 282, 444
TspRI CASTG 1 cut(s) 364
XmnI GAANNNNTTC 1 cut(s) 341
XspI CTAG 1 cut(s) 425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.