Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002280.1

Orthogroup ID

OG0004212

Physical Location & Seq

Genomic Coordinates Forward (+)

37548 .. 40334

Gene Structure 2787 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002280.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2358 bp

atggaggatttcacaagtggagattacagttttagtaatgaatcctcatcgtctagtgattccgacaagtcttctcagggatcaacatctagttctgatgagggggggacgtctactgggtcgttggaaaacttgggtgtgcatgggttagagaaggagtttgtaggtcagggattagagtctggcagtcggggttcctctactacgtgttcggagtctagtggctcctccttcaaagggggacgtcgaatgttgagtgggagaggccgtggtcgtgtgacttcggttggcgtgttatctggacctagtctccggggcgcttcctctggacgattatgcagcaatagtgaggtggagagtgattatggtgggtcgaagttgagtagaaaaatgcagacagaggctaggagacggctgttggcatataaggctgctcgttctccgtggacggctgaccaggagatgaccgagaccagtgttgacgctctaagagaactgaggtggaactatcaaatacctgactccgtaaagctaagattgattggggatgatgagctgcctagtattcctccggatgggtttgttactctatacccagccatgctagaattaggtattaggataccgttccagccctccgtgcatggttgggtgagtgagcttggagttgctccagctcaaattaatcctaatggctacagagtgattattgctttgatagcattgtggaatgataaattcagttgtgacccaccaattgaagttcttcgttatcatttgcggcttaagaacatatcagtgaccaaagatcctattgagggtttttattgtattgtccctcaacgtcctaccattgtacttgagcttccatccgtggttaaaacttggaggaataagtggttttatgttaagggatgggcgtccacctctagtggtggagttccagcccccaacattgttacccattttaaggatgcagggaagtggtggaaactgaattctctctctagagttgtgaaggagagatttgaaactttacttgatcttccgagggaggagcgacgtttcaagacaattgtcacagaagcgaaattggcgagacttgggatagcagctccagctagaaatatgacacttgacaagaatgatcctggacttcgtgcaaggattcaccagcaacgtcaagccataaaggggccaattgtgcccagacctttggtcccttccaatgaaggcgtgtcttcacctaggccttcaagtcccaagtttcgggcccgaccaccgaggcttccatcacctcttggatttaggagggcaacgggtaagcaagaccctctgaagaagaaaacgagggtggatgacgaggttgacaatctcatggaagatgcgaagaaggagactcggcagtccaaggctaggcagcgagttgacactccgggtgtgcaccaccgtcaagttgacgttccagagtttctttctgattatgttggggacatgatggggcttgtcgatactaagacttataccgcaaattttgggacgggtgaactcgaaggagaacttgattcccttatggaaggggctaagagttttttgattttggccaatttgaagaatcatctcataattgacaagatggcggagaggattcgtgacttggactcccaggtgcttgcaatcaacaaggagctcaggccaaccaagactcagttgggtcaaaagaagaaagatgtggctaaaatggaggattatcacaaaaagcttaaggagaaagaaacagaggttgaccagctgggagaaaaggttaagggcctagaaaaggaactcagggttaaggccaaagagtgtaagaaaaacaaggatttggaggtggaagtccaagaccttagagagaggtttgagggtctcaggggcaaggccagggctggtcgtaacaatatattgagggagttccaggattctaaagagtacaaggacctcttagagaatagctactcagaggggtatgctgacttgctcaacctatgtgtagagcattttggtgagaagggtatggaatgggcagtttcattgggcgttgatgttgtgccttcggaaaacaagggtagtccttccaaggctacacctgctgatgcaagtccaagtcttgccctgtctggccatgaagttgagggattggacagtggaggagtcgaccaagcaagtgggtcagtattgggagacggacctactgaggcactgagcgacgaccaccagcaaggtaagtctggcactggtgacactccggctgaggacaaagggggtgctcttggcgatggggaagatgggggtgaaagggctaaggtgacaaatgtgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

785

Amino Acids

86.24

Weight (kDa)

7.6

Isoelectric Point (pI)

42.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004212)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g00910 FvH4_2g19120
malus_domestica	MD00G1026400.v1.1 MD05G1342000.v1.1
rosa_chinensis	RchiOBHm_Chr1g0325301 RchiOBHm_Chr6g0267261
rosa_laevigata	RLG00000002306 RLG00000008304 RLG00000008305 RLG00000023168 RLG00000023169 RLG00000034344 RLG00000034345
rosa_multiflora	Rmu_sc0000226.1_g000007 Rmu_sc0002280.1_g000010 Rmu_sc0002724.1_g000006 Rmu_sc0003945.1_g000015 Rmu_sc0005665.1_g000015 Rmu_sc0015523.1_g000014
rosa_roxburghii	Rroxscaffold_2G00155190 Rroxscaffold_2G00155200 Rroxscaffold_2G00155210 Rroxscaffold_2G00155220 Rroxscaffold_3G00238450 Rroxscaffold_3G00238460 Rroxscaffold_4G00318960 Rroxscaffold_4G00318980 Rroxscaffold_7G00215260
rosa_samantha	Rh1DG282300 Rh2DG050600 Rh3AG252200 Rh7AG090900 Rh7AG425200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2134
AasI	GACNNNNNNGTC	1 cut(s)	1405
AatII	GACGTC	2 cut(s)	113, 247
Acc36I	ACCTGC	1 cut(s)	2134
AccI	GTMKAC	2 cut(s)	113, 2193
AccIII	TCCGGA	1 cut(s)	571
AciI	CCGC	3 cut(s)	781, 1527, 1640
AclWI	GGATC	3 cut(s)	88, 803, 1142
AcoI	YGGCCR	2 cut(s)	1602, 2158
AcsI	RAATTY	3 cut(s)	737, 997, 1531
AcuI	CTGAAG	1 cut(s)	1358
AcyI	GRCGYC	3 cut(s)	110, 244, 920
AfaI	GTAC	2 cut(s)	858, 1970
AfiI	CCNNNNNNNGG	8 cut(s)	237, 575, 818, 970, 1194, 1269, 1416, 1819
AflII	CTTAAG	2 cut(s)	785, 1763
AflIII	ACRYGT	1 cut(s)	206
AgsI	TTSAA	6 cut(s)	235, 761, 1031, 1069, 1257, 1612
AhdI	GACNNNNNGTC	1 cut(s)	1217
AjnI	CCWGG	5 cut(s)	456, 1150, 1665, 1919, 1953
Alw21I	GWGCWC	3 cut(s)	1446, 1692, 2308
Alw26I	GTCTC	7 cut(s)	314, 403, 464, 1093, 1391, 1910, 2214
Alw44I	GTGCAC	1 cut(s)	1442
AlwI	GGATC	3 cut(s)	88, 803, 1142
Aor13HI	TCCGGA	1 cut(s)	571
ApaI	GGGCCC	1 cut(s)	1276
ApaLI	GTGCAC	1 cut(s)	1442
ApeKI	GCWGC	5 cut(s)	339, 431, 556, 1112, 1420
ApoI	RAATTY	3 cut(s)	737, 997, 1531
AseI	ATTAAT	1 cut(s)	684
Asp700I	GAANNNNTTC	1 cut(s)	765
AspA2I	CCTAGG	1 cut(s)	1247
AspLEI	GCGC	1 cut(s)	320
AspS9I	GGNCC	8 cut(s)	302, 1196, 1219, 1272, 1273, 1810, 1975, 2225
AsuC2I	CCSGG	2 cut(s)	314, 1437
AsuHPI	GGTGA	9 cut(s)	664, 1163, 1236, 1287, 1556, 2054, 2288, 2342, 2356
AvaII	GGWCC	4 cut(s)	302, 1219, 1975, 2225
AvrII	CCTAGG	1 cut(s)	1247
BaeGI	GKGCMC	3 cut(s)	1209, 1276, 1446
BalI	TGGCCA	2 cut(s)	1604, 2160
BanII	GRGCYC	2 cut(s)	1276, 1692
BarI	GAAGNNNNNNTAC	2 cut(s)	849, 881
BbsI	GAAGAC	2 cut(s)	63, 1233
Bbv12I	GWGCWC	3 cut(s)	1446, 1692, 2308
BbvCI	CCTCAGC	1 cut(s)	2289
BbvI	GCAGC	5 cut(s)	351, 418, 543, 1124, 1432
BccI	CCATC	8 cut(s)	569, 877, 909, 1300, 1492, 1630, 2309, 2318
BceAI	ACGGC	3 cut(s)	252, 428, 465
BciT130I	CCWGG	5 cut(s)	458, 1152, 1667, 1921, 1955
BciVI	GTATCC	1 cut(s)	615
BcnI	CCSGG	2 cut(s)	314, 1437
BcoDI	GTCTC	7 cut(s)	314, 403, 464, 1093, 1391, 1910, 2214
BfmI	CTRYAG	1 cut(s)	697
BfoI	RGCGCY	1 cut(s)	321
BfrI	CTTAAG	2 cut(s)	785, 1763
BfuAI	ACCTGC	1 cut(s)	2134
BfuI	GTATCC	1 cut(s)	615
BisI	GCNGC	6 cut(s)	340, 432, 557, 782, 1113, 1421
BlnI	CCTAGG	1 cut(s)	1247
BlsI	GCNGC	6 cut(s)	341, 433, 558, 783, 1114, 1422
Bme1390I	CCNGG	7 cut(s)	314, 458, 1152, 1437, 1667, 1921, 1955
Bme18I	GGWCC	4 cut(s)	302, 1219, 1975, 2225
BmeRI	GACNNNNNGTC	1 cut(s)	1217
BmgT120I	GGNCC	8 cut(s)	302, 1196, 1219, 1272, 1273, 1810, 1975, 2225
BmiI	GGNNCC	5 cut(s)	196, 226, 1197, 1221, 1274
BmrFI	CCNGG	7 cut(s)	314, 458, 1152, 1437, 1667, 1921, 1955
BmrI	ACTGGG	1 cut(s)	126
BmsI	GCATC	3 cut(s)	964, 1375, 2122
BmuI	ACTGGG	1 cut(s)	126
BoxI	GACNNNNGTC	1 cut(s)	1076
BpiI	GAAGAC	2 cut(s)	63, 1233
BpmI	CTGGAG	2 cut(s)	657, 1101
Bpu10I	CCTNAGC	3 cut(s)	1691, 2289, 2340
BpuEI	CTTGAG	1 cut(s)	881
BpuMI	CCSGG	2 cut(s)	314, 1437
BsaAI	YACGTR	1 cut(s)	207
BsaBI	GATNNNNATC	1 cut(s)	85
BsaHI	GRCGYC	3 cut(s)	110, 244, 920
BsaI	GGTCTC	2 cut(s)	464, 1910
BsaWI	WCCGGW	1 cut(s)	571
BsaXI	ACNNNNNCTCC	8 cut(s)	253, 283, 294, 324, 1646, 1676, 1788, 1818
Bsc4I	CCNNNNNNNGG	8 cut(s)	237, 575, 818, 970, 1194, 1269, 1416, 1819
Bse1I	ACTGG	3 cut(s)	121, 474, 2278
Bse8I	GATNNNNATC	1 cut(s)	85
BseAI	TCCGGA	1 cut(s)	571
BseBI	CCWGG	5 cut(s)	458, 1152, 1667, 1921, 1955
BseGI	GGATG	6 cut(s)	553, 580, 869, 920, 979, 1363
BseJI	GATNNNNATC	1 cut(s)	85
BseLI	CCNNNNNNNGG	8 cut(s)	237, 575, 818, 970, 1194, 1269, 1416, 1819
BseNI	ACTGG	3 cut(s)	121, 474, 2278
BseRI	GAGGAG	3 cut(s)	217, 1070, 2202
BseSI	GKGCMC	3 cut(s)	1209, 1276, 1446
BseXI	GCAGC	5 cut(s)	351, 418, 543, 1124, 1432
BseYI	CCCAGC	2 cut(s)	595, 1792
BsiHKAI	GWGCWC	3 cut(s)	1446, 1692, 2308
BsiSI	CCGG	4 cut(s)	313, 572, 1436, 2285
BslFI	GGGAC	7 cut(s)	121, 255, 821, 1205, 1245, 1505, 1552
BslI	CCNNNNNNNGG	8 cut(s)	237, 575, 818, 970, 1194, 1269, 1416, 1819
BsmAI	GTCTC	7 cut(s)	314, 403, 464, 1093, 1391, 1910, 2214
BsmBI	CGTCTC	2 cut(s)	403, 2214
BsmFI	GGGAC	7 cut(s)	121, 255, 821, 1205, 1245, 1505, 1552
Bso31I	GGTCTC	2 cut(s)	464, 1910
Bsp120I	GGGCCC	1 cut(s)	1272
Bsp1286I	GDGCHC	5 cut(s)	1209, 1276, 1446, 1692, 2308
Bsp13I	TCCGGA	1 cut(s)	571
Bsp143I	GATC	4 cut(s)	80, 808, 1042, 1147
BspACI	CCGC	3 cut(s)	781, 1527, 1640
BspEI	TCCGGA	1 cut(s)	571
BspLI	GGNNCC	5 cut(s)	196, 226, 1197, 1221, 1274
BspMI	ACCTGC	1 cut(s)	2134
BspPI	GGATC	3 cut(s)	88, 803, 1142
BspTI	CTTAAG	2 cut(s)	785, 1763
BspTNI	GGTCTC	2 cut(s)	464, 1910
BsrI	ACTGG	3 cut(s)	121, 474, 2278
BssMI	GATC	4 cut(s)	80, 808, 1042, 1147
BssNI	GRCGYC	3 cut(s)	110, 244, 920
BssT1I	CCWWGG	3 cut(s)	1247, 1410, 2115
Bst2UI	CCWGG	5 cut(s)	458, 1152, 1667, 1921, 1955
Bst4CI	ACNGT	4 cut(s)	29, 627, 1451, 2183
BstACI	GRCGYC	3 cut(s)	110, 244, 920
BstAFI	CTTAAG	2 cut(s)	785, 1763
BstBAI	YACGTR	1 cut(s)	207
BstC8I	GCNNGC	1 cut(s)	1674
BstDSI	CCRYGG	3 cut(s)	268, 443, 873
BstENI	CCTNNNNNAGG	1 cut(s)	1817
BstF5I	GGATG	6 cut(s)	553, 580, 869, 920, 979, 1363
BstH2I	RGCGCY	1 cut(s)	321
BstHHI	GCGC	1 cut(s)	320
BstKTI	GATC	4 cut(s)	83, 811, 1045, 1150
BstMAI	GTCTC	7 cut(s)	314, 403, 464, 1093, 1391, 1910, 2214
BstMBI	GATC	4 cut(s)	80, 808, 1042, 1147
BstMWI	GCNNNNNNNGC	7 cut(s)	428, 640, 719, 1094, 1118, 1204, 2126
BstNI	CCWGG	5 cut(s)	458, 1152, 1667, 1921, 1955
BstPAI	GACNNNNGTC	1 cut(s)	1076
BstSCI	CCNGG	7 cut(s)	312, 456, 1150, 1435, 1665, 1919, 1953
BstSFI	CTRYAG	1 cut(s)	697
BstSLI	GKGCMC	3 cut(s)	1209, 1276, 1446
BstV1I	GCAGC	5 cut(s)	351, 418, 543, 1124, 1432
BstV2I	GAAGAC	2 cut(s)	63, 1233
BstX2I	RGATCY	1 cut(s)	808
BstXI	CCANNNNNNTGG	2 cut(s)	1216, 2204
BstYI	RGATCY	1 cut(s)	808
BsuI	GTATCC	1 cut(s)	615
BtgI	CCRYGG	3 cut(s)	268, 443, 873
BtgZI	GCGATG	1 cut(s)	2328
BtsCI	GGATG	6 cut(s)	553, 580, 869, 920, 979, 1363
BtsIMutI	CAGTG	5 cut(s)	481, 804, 2188, 2237, 2271
BveI	ACCTGC	1 cut(s)	2134
Cac8I	GCNNGC	1 cut(s)	1674
CfoI	GCGC	1 cut(s)	320
Cfr13I	GGNCC	8 cut(s)	302, 1196, 1219, 1272, 1273, 1810, 1975, 2225
CseI	GACGC	2 cut(s)	491, 909
Csp6I	GTAC	2 cut(s)	857, 1969
CviAII	CATG	6 cut(s)	143, 601, 644, 1378, 1495, 2162
CviQI	GTAC	2 cut(s)	857, 1969
DpnI	GATC	4 cut(s)	82, 810, 1044, 1149
DpnII	GATC	4 cut(s)	80, 808, 1042, 1147
DrdI	GACNNNNNNGTC	1 cut(s)	1405
DriI	GACNNNNNGTC	1 cut(s)	1217
DseDI	GACNNNNNNGTC	1 cut(s)	1405
EaeI	YGGCCR	2 cut(s)	1602, 2158
Eam1105I	GACNNNNNGTC	1 cut(s)	1217
EciI	GGCGGA	1 cut(s)	1655
Ecl136II	GAGCTC	1 cut(s)	1690
Eco130I	CCWWGG	3 cut(s)	1247, 1410, 2115
Eco147I	AGGCCT	1 cut(s)	1252
Eco24I	GRGCYC	2 cut(s)	1276, 1692
Eco31I	GGTCTC	2 cut(s)	464, 1910
Eco47I	GGWCC	4 cut(s)	302, 1219, 1975, 2225
Eco53kI	GAGCTC	1 cut(s)	1690
Eco57I	CTGAAG	1 cut(s)	1358
EcoICRI	GAGCTC	1 cut(s)	1690
EcoNI	CCTNNNNNAGG	1 cut(s)	1817
EcoO109I	RGGNCCY	2 cut(s)	1810, 1975
EcoRI	GAATTC	1 cut(s)	997
EcoRII	CCWGG	5 cut(s)	456, 1150, 1665, 1919, 1953
EcoT14I	CCWWGG	3 cut(s)	1247, 1410, 2115
EcoT38I	GRGCYC	2 cut(s)	1276, 1692
ErhI	CCWWGG	3 cut(s)	1247, 1410, 2115
Esp3I	CGTCTC	2 cut(s)	403, 2214
FaeI	CATG	6 cut(s)	146, 604, 647, 1381, 1498, 2165
FalI	AAGNNNNNCTT	4 cut(s)	1545, 1577, 1964, 1996
FaqI	GGGAC	7 cut(s)	121, 255, 821, 1205, 1245, 1505, 1552
FatI	CATG	6 cut(s)	142, 600, 643, 1377, 1494, 2161
FblI	GTMKAC	2 cut(s)	113, 2193
Fnu4HI	GCNGC	6 cut(s)	340, 432, 557, 782, 1113, 1421
FokI	GGATG	6 cut(s)	560, 587, 856, 927, 986, 1370
FriOI	GRGCYC	2 cut(s)	1276, 1692
Fsp4HI	GCNGC	6 cut(s)	340, 432, 557, 782, 1113, 1421
GlaI	GCGC	1 cut(s)	319
GluI	GCNGC	6 cut(s)	340, 432, 557, 782, 1113, 1421
GsaI	CCCAGC	2 cut(s)	599, 1796
GsuI	CTGGAG	2 cut(s)	657, 1101
HaeII	RGCGCY	1 cut(s)	321
HapII	CCGG	4 cut(s)	313, 572, 1436, 2285
HgaI	GACGC	2 cut(s)	491, 909
HhaI	GCGC	1 cut(s)	320
Hin1I	GRCGYC	3 cut(s)	110, 244, 920
Hin1II	CATG	6 cut(s)	146, 604, 647, 1381, 1498, 2165
Hin6I	GCGC	1 cut(s)	318
HinP1I	GCGC	1 cut(s)	318
HincII	GTYRAC	6 cut(s)	481, 1369, 1429, 1459, 1786, 2194
HindII	GTYRAC	6 cut(s)	481, 1369, 1429, 1459, 1786, 2194
HindIII	AAGCTT	1 cut(s)	1760
HpaII	CCGG	4 cut(s)	313, 572, 1436, 2285
HphI	GGTGA	9 cut(s)	664, 1163, 1236, 1287, 1556, 2054, 2288, 2342, 2356
Hpy188I	TCNGA	8 cut(s)	64, 97, 214, 1050, 1338, 1480, 1999, 2095
Hpy188III	TCNNGA	7 cut(s)	300, 327, 572, 1008, 1069, 1466, 1652
Hpy99I	CGWCG	3 cut(s)	249, 1065, 2249
HpyCH4III	ACNGT	4 cut(s)	29, 627, 1451, 2183
HpyCH4IV	ACGT	7 cut(s)	110, 206, 244, 844, 1063, 1180, 1461
HpyCH4V	TGCA	9 cut(s)	142, 339, 394, 643, 977, 1163, 1444, 1676, 2135
HpyF10VI	GCNNNNNNNGC	7 cut(s)	428, 640, 719, 1094, 1118, 1204, 2126
HpySE526I	ACGT	7 cut(s)	110, 206, 244, 844, 1063, 1180, 1461
Hsp92I	GRCGYC	3 cut(s)	110, 244, 920
Hsp92II	CATG	6 cut(s)	146, 604, 647, 1381, 1498, 2165
HspAI	GCGC	1 cut(s)	318
Kpn2I	TCCGGA	1 cut(s)	571
Kzo9I	GATC	4 cut(s)	80, 808, 1042, 1147
LmnI	GCTCC	5 cut(s)	230, 676, 1057, 1120, 1687
Lsp1109I	GCAGC	5 cut(s)	351, 418, 543, 1124, 1432
LweI	GCATC	3 cut(s)	964, 1375, 2122
MaeII	ACGT	7 cut(s)	110, 206, 244, 844, 1063, 1180, 1461
MalI	GATC	4 cut(s)	82, 810, 1044, 1149
MboI	GATC	4 cut(s)	80, 808, 1042, 1147
MfeI	CAATTG	3 cut(s)	756, 1074, 1200
MflI	RGATCY	1 cut(s)	808
MhlI	GDGCHC	5 cut(s)	1209, 1276, 1446, 1692, 2308
MlsI	TGGCCA	2 cut(s)	1604, 2160
MluNI	TGGCCA	2 cut(s)	1604, 2160
MlyI	GAGTC	7 cut(s)	188, 224, 515, 1393, 1655, 1699, 2199
MmeI	TCCRAC	2 cut(s)	87, 105
Mox20I	TGGCCA	2 cut(s)	1604, 2160
MroI	TCCGGA	1 cut(s)	571
MroXI	GAANNNNTTC	1 cut(s)	765
MscI	TGGCCA	2 cut(s)	1604, 2160
MseI	TTAA	8 cut(s)	684, 786, 879, 909, 969, 1764, 1806, 1833
MslI	CAYNNNNRTG	2 cut(s)	797, 2040
Msp20I	TGGCCA	2 cut(s)	1604, 2160
MspA1I	CMGCKG	1 cut(s)	1792
MspCI	CTTAAG	2 cut(s)	785, 1763
MspI	CCGG	4 cut(s)	313, 572, 1436, 2285
MspR9I	CCNGG	7 cut(s)	314, 458, 1152, 1437, 1667, 1921, 1955
MunI	CAATTG	3 cut(s)	756, 1074, 1200
MvaI	CCWGG	5 cut(s)	458, 1152, 1667, 1921, 1955
MwoI	GCNNNNNNNGC	7 cut(s)	428, 640, 719, 1094, 1118, 1204, 2126
NciI	CCSGG	2 cut(s)	314, 1437
NdeII	GATC	4 cut(s)	80, 808, 1042, 1147
NlaIII	CATG	6 cut(s)	146, 604, 647, 1381, 1498, 2165
NlaIV	GGNNCC	5 cut(s)	196, 226, 1197, 1221, 1274
NmeAIII	GCCGAG	1 cut(s)	1381
NmuCI	GTSAC	7 cut(s)	277, 746, 799, 1078, 1652, 2276, 2344
PaqCI	CACCTGC	1 cut(s)	2134
PceI	AGGCCT	1 cut(s)	1252
PdmI	GAANNNNTTC	1 cut(s)	765
PfeI	GAWTC	7 cut(s)	41, 59, 1168, 1565, 1615, 1648, 1958
PflFI	GACNNNGTC	1 cut(s)	306
PfoI	TCCNGGA	2 cut(s)	1150, 1953
PkrI	GCNGC	6 cut(s)	341, 433, 558, 783, 1114, 1422
PleI	GAGTC	7 cut(s)	187, 223, 515, 1393, 1655, 1699, 2198
PpsI	GAGTC	7 cut(s)	187, 223, 515, 1393, 1655, 1699, 2198
Ppu21I	YACGTR	1 cut(s)	207
PpuMI	RGGWCCY	1 cut(s)	1975
PshAI	GACNNNNGTC	1 cut(s)	1076
PshBI	ATTAAT	1 cut(s)	684
Psp124BI	GAGCTC	1 cut(s)	1692
Psp5II	RGGWCCY	1 cut(s)	1975
Psp6I	CCWGG	5 cut(s)	456, 1150, 1665, 1919, 1953
PspFI	CCCAGC	2 cut(s)	595, 1792
PspGI	CCWGG	5 cut(s)	456, 1150, 1665, 1919, 1953
PspN4I	GGNNCC	5 cut(s)	196, 226, 1197, 1221, 1274
PspOMI	GGGCCC	1 cut(s)	1272
PspPI	GGNCC	8 cut(s)	302, 1196, 1219, 1272, 1273, 1810, 1975, 2225
PspPPI	RGGWCCY	1 cut(s)	1975
PsuI	RGATCY	1 cut(s)	808
PsyI	GACNNNGTC	1 cut(s)	306
PvuII	CAGCTG	1 cut(s)	1792
RsaI	GTAC	2 cut(s)	858, 1970
RsaNI	GTAC	2 cut(s)	857, 1969
RseI	CAYNNNNRTG	2 cut(s)	797, 2040
SacI	GAGCTC	1 cut(s)	1692
SalI	GTCGAC	1 cut(s)	2192
SaqAI	TTAA	8 cut(s)	684, 786, 879, 909, 969, 1764, 1806, 1833
SatI	GCNGC	6 cut(s)	340, 432, 557, 782, 1113, 1421
Sau3AI	GATC	4 cut(s)	80, 808, 1042, 1147
Sau96I	GGNCC	8 cut(s)	302, 1196, 1219, 1272, 1273, 1810, 1975, 2225
SchI	GAGTC	7 cut(s)	188, 224, 515, 1393, 1655, 1699, 2199
ScrFI	CCNGG	7 cut(s)	314, 458, 1152, 1437, 1667, 1921, 1955
SduI	GDGCHC	5 cut(s)	1209, 1276, 1446, 1692, 2308
SfaNI	GCATC	3 cut(s)	964, 1375, 2122
SfcI	CTRYAG	1 cut(s)	697
SinI	GGWCC	4 cut(s)	302, 1219, 1975, 2225
SmiMI	CAYNNNNRTG	2 cut(s)	797, 2040
SmlI	CTYRAG	3 cut(s)	785, 860, 1763
SmoI	CTYRAG	3 cut(s)	785, 860, 1763
SseBI	AGGCCT	1 cut(s)	1252
SsiI	CCGC	3 cut(s)	781, 1527, 1640
SstI	GAGCTC	1 cut(s)	1692
StuI	AGGCCT	1 cut(s)	1252
StyD4I	CCNGG	7 cut(s)	312, 456, 1150, 1435, 1665, 1919, 1953
StyI	CCWWGG	3 cut(s)	1247, 1410, 2115
TaaI	ACNGT	4 cut(s)	29, 627, 1451, 2183
TaiI	ACGT	7 cut(s)	113, 209, 247, 847, 1066, 1183, 1464
TaqI	TCGA	5 cut(s)	247, 374, 1509, 1551, 2193
TaqII	GACCGA	1 cut(s)	482
TatI	WGTACW	2 cut(s)	856, 1968
TauI	GCSGC	1 cut(s)	784
TfiI	GAWTC	7 cut(s)	41, 59, 1168, 1565, 1615, 1648, 1958
Tru1I	TTAA	8 cut(s)	684, 786, 879, 909, 969, 1764, 1806, 1833
Tru9I	TTAA	8 cut(s)	684, 786, 879, 909, 969, 1764, 1806, 1833
TscAI	CASTG	5 cut(s)	481, 804, 2188, 2244, 2278
TseFI	GTSAC	7 cut(s)	277, 746, 799, 1078, 1652, 2276, 2344
TseI	GCWGC	5 cut(s)	339, 431, 556, 1112, 1420
Tsp45I	GTSAC	7 cut(s)	277, 746, 799, 1078, 1652, 2276, 2344
TspDTI	ATGAA	4 cut(s)	54, 1245, 2058, 2178
TspGWI	ACGGA	5 cut(s)	432, 514, 628, 862, 2238
TspRI	CASTG	5 cut(s)	481, 804, 2188, 2244, 2278
Tth111I	GACNNNGTC	1 cut(s)	306
Vha464I	CTTAAG	2 cut(s)	785, 1763
VneI	GTGCAC	1 cut(s)	1442
VpaK11BI	GGWCC	4 cut(s)	302, 1219, 1975, 2225
VspI	ATTAAT	1 cut(s)	684
XagI	CCTNNNNNAGG	1 cut(s)	1817
XapI	RAATTY	3 cut(s)	737, 997, 1531
XbaI	TCTAGA	1 cut(s)	1007
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1708
XmaJI	CCTAGG	1 cut(s)	1247
XmiI	GTMKAC	2 cut(s)	113, 2193
XmnI	GAANNNNTTC	1 cut(s)	765
ZraI	GACGTC	2 cut(s)	111, 245

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.