Encoded by
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g00910 FvH4_2g19120 |
| malus_domestica | MD00G1026400.v1.1 MD05G1342000.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0325301 RchiOBHm_Chr6g0267261 |
| rosa_laevigata | RLG00000002306 RLG00000008304 RLG00000008305 RLG00000023168 RLG00000023169 RLG00000034344 RLG00000034345 |
| rosa_multiflora | Rmu_sc0000226.1_g000007 Rmu_sc0002280.1_g000010 Rmu_sc0002724.1_g000006 Rmu_sc0003945.1_g000015 Rmu_sc0005665.1_g000015 Rmu_sc0015523.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00155190 Rroxscaffold_2G00155200 Rroxscaffold_2G00155210 Rroxscaffold_2G00155220 Rroxscaffold_3G00238450 Rroxscaffold_3G00238460 Rroxscaffold_4G00318960 Rroxscaffold_4G00318980 Rroxscaffold_7G00215260 |
| rosa_samantha | Rh1DG282300 Rh2DG050600 Rh3AG252200 Rh7AG090900 Rh7AG425200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 934 |
| AccI | GTMKAC | 1 cut(s) | 431 |
| AciI | CCGC | 2 cut(s) | 561, 1169 |
| AclWI | GGATC | 1 cut(s) | 605 |
| AcoI | YGGCCR | 1 cut(s) | 1131 |
| AcsI | RAATTY | 5 cut(s) | 242, 267, 460, 998, 1060 |
| AcuI | CTGAAG | 2 cut(s) | 1241, 1313 |
| AcyI | GRCGYC | 1 cut(s) | 428 |
| AfaI | GTAC | 1 cut(s) | 366 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 80, 441, 657, 695, 732, 1348 |
| AflII | CTTAAG | 1 cut(s) | 290 |
| AgsI | TTSAA | 3 cut(s) | 247, 266, 1141 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 680 |
| AjnI | CCWGG | 4 cut(s) | 613, 746, 763, 1341 |
| AluBI | AGCT | 9 cut(s) | 37, 139, 166, 182, 373, 578, 815, 1219, 1240 |
| AluI | AGCT | 9 cut(s) | 37, 139, 166, 182, 373, 578, 815, 1219, 1240 |
| Alw26I | GTCTC | 2 cut(s) | 920, 1298 |
| AlwI | GGATC | 1 cut(s) | 605 |
| Ama87I | CYCGRG | 1 cut(s) | 1079 |
| AoxI | GGCC | 7 cut(s) | 659, 713, 735, 749, 1131, 1339, 1365 |
| ApaI | GGGCCC | 1 cut(s) | 739 |
| ApeKI | GCWGC | 3 cut(s) | 575, 949, 1205 |
| ApoI | RAATTY | 5 cut(s) | 242, 267, 460, 998, 1060 |
| AseI | ATTAAT | 1 cut(s) | 189 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 270 |
| AspA2I | CCTAGG | 1 cut(s) | 710 |
| AspLEI | GCGC | 2 cut(s) | 847, 975 |
| AspS9I | GGNCC | 6 cut(s) | 659, 682, 714, 735, 736, 1339 |
| AsuC2I | CCSGG | 2 cut(s) | 78, 919 |
| AsuHPI | GGTGA | 3 cut(s) | 169, 699, 750 |
| AsuII | TTCGAA | 1 cut(s) | 492 |
| AvaI | CYCGRG | 1 cut(s) | 1079 |
| AvaII | GGWCC | 1 cut(s) | 682 |
| AvrII | CCTAGG | 1 cut(s) | 710 |
| BaeGI | GKGCMC | 2 cut(s) | 672, 739 |
| BalI | TGGCCA | 1 cut(s) | 1133 |
| BanII | GRGCYC | 1 cut(s) | 739 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 357, 389 |
| BbsI | GAAGAC | 1 cut(s) | 696 |
| BbvI | GCAGC | 3 cut(s) | 587, 961, 1217 |
| BccI | CCATC | 5 cut(s) | 385, 803, 1010, 1021, 1159 |
| BciT130I | CCWGG | 4 cut(s) | 615, 748, 765, 1343 |
| BciVI | GTATCC | 2 cut(s) | 120, 310 |
| BclI | TGATCA | 1 cut(s) | 1315 |
| BcnI | CCSGG | 2 cut(s) | 78, 919 |
| BcoDI | GTCTC | 2 cut(s) | 920, 1298 |
| BfaI | CTAG | 9 cut(s) | 66, 110, 438, 471, 581, 711, 945, 965, 1408 |
| BfmI | CTRYAG | 1 cut(s) | 202 |
| BfrI | CTTAAG | 1 cut(s) | 290 |
| BfuI | GTATCC | 2 cut(s) | 120, 310 |
| BglII | AGATCT | 1 cut(s) | 788 |
| BisI | GCNGC | 3 cut(s) | 576, 950, 1206 |
| BlnI | CCTAGG | 1 cut(s) | 710 |
| BlsI | GCNGC | 3 cut(s) | 577, 951, 1207 |
| Bme1390I | CCNGG | 6 cut(s) | 78, 615, 748, 765, 919, 1343 |
| Bme18I | GGWCC | 1 cut(s) | 682 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 680 |
| BmeT110I | CYCGRG | 1 cut(s) | 1079 |
| BmgT120I | GGNCC | 6 cut(s) | 659, 682, 714, 735, 736, 1339 |
| BmiI | GGNNCC | 4 cut(s) | 660, 684, 716, 737 |
| BmrFI | CCNGG | 6 cut(s) | 78, 615, 748, 765, 919, 1343 |
| BmsI | GCATC | 3 cut(s) | 788, 904, 1188 |
| BpiI | GAAGAC | 1 cut(s) | 696 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 913, 945 |
| BpmI | CTGGAG | 2 cut(s) | 620, 1364 |
| Bpu14I | TTCGAA | 1 cut(s) | 492 |
| BpuEI | CTTGAG | 2 cut(s) | 389, 851 |
| BpuMI | CCSGG | 2 cut(s) | 78, 919 |
| Bsa29I | ATCGAT | 2 cut(s) | 782, 798 |
| BsaHI | GRCGYC | 1 cut(s) | 428 |
| BsaJI | CCNNGG | 5 cut(s) | 312, 512, 678, 710, 746 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1317, 1347 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 80, 441, 657, 695, 732, 1348 |
| Bse1I | ACTGG | 1 cut(s) | 260 |
| BseBI | CCWGG | 4 cut(s) | 615, 748, 765, 1343 |
| BseCI | ATCGAT | 2 cut(s) | 782, 798 |
| BseDI | CCNNGG | 5 cut(s) | 312, 512, 678, 710, 746 |
| BseGI | GGATG | 2 cut(s) | 58, 892 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 80, 441, 657, 695, 732, 1348 |
| BseMII | CTCAG | 3 cut(s) | 197, 1250, 1369 |
| BseNI | ACTGG | 1 cut(s) | 260 |
| BseSI | GKGCMC | 2 cut(s) | 672, 739 |
| BseXI | GCAGC | 3 cut(s) | 587, 961, 1217 |
| BseYI | CCCAGC | 2 cut(s) | 100, 423 |
| BshFI | GGCC | 7 cut(s) | 661, 715, 737, 751, 1133, 1341, 1367 |
| BshVI | ATCGAT | 2 cut(s) | 782, 798 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1079 |
| BsiSI | CCGG | 2 cut(s) | 77, 919 |
| BslFI | GGGAC | 4 cut(s) | 329, 668, 708, 1034 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 80, 441, 657, 695, 732, 1348 |
| BsmAI | GTCTC | 2 cut(s) | 920, 1298 |
| BsmBI | CGTCTC | 1 cut(s) | 1298 |
| BsmFI | GGGAC | 4 cut(s) | 329, 668, 708, 1034 |
| BsnI | GGCC | 7 cut(s) | 661, 715, 737, 751, 1133, 1341, 1367 |
| BsoBI | CYCGRG | 1 cut(s) | 1079 |
| Bsp119I | TTCGAA | 1 cut(s) | 492 |
| Bsp120I | GGGCCC | 1 cut(s) | 735 |
| Bsp1286I | GDGCHC | 2 cut(s) | 672, 739 |
| Bsp143I | GATC | 5 cut(s) | 505, 610, 783, 788, 1315 |
| BspACI | CCGC | 2 cut(s) | 561, 1169 |
| BspANI | GGCC | 7 cut(s) | 661, 715, 737, 751, 1133, 1341, 1367 |
| BspCNI | CTCAG | 3 cut(s) | 196, 1249, 1368 |
| BspDI | ATCGAT | 2 cut(s) | 782, 798 |
| BspLI | GGNNCC | 4 cut(s) | 660, 684, 716, 737 |
| BspPI | GGATC | 1 cut(s) | 605 |
| BspT104I | TTCGAA | 1 cut(s) | 492 |
| BspTI | CTTAAG | 1 cut(s) | 290 |
| BsrI | ACTGG | 1 cut(s) | 260 |
| BssECI | CCNNGG | 5 cut(s) | 312, 512, 678, 710, 746 |
| BssMI | GATC | 5 cut(s) | 505, 610, 783, 788, 1315 |
| BssNI | GRCGYC | 1 cut(s) | 428 |
| BssT1I | CCWWGG | 3 cut(s) | 312, 678, 710 |
| Bst2UI | CCWGG | 4 cut(s) | 615, 748, 765, 1343 |
| Bst4CI | ACNGT | 1 cut(s) | 980 |
| Bst6I | CTCTTC | 1 cut(s) | 834 |
| BstACI | GRCGYC | 1 cut(s) | 428 |
| BstAFI | CTTAAG | 1 cut(s) | 290 |
| BstBI | TTCGAA | 1 cut(s) | 492 |
| BstC8I | GCNNGC | 2 cut(s) | 563, 1203 |
| BstDEI | CTNAG | 9 cut(s) | 2, 38, 183, 939, 1044, 1113, 1230, 1236, 1355 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 693, 1346 |
| BstF5I | GGATG | 2 cut(s) | 58, 892 |
| BstHHI | GCGC | 2 cut(s) | 847, 975 |
| BstKTI | GATC | 5 cut(s) | 508, 613, 786, 791, 1318 |
| BstMAI | GTCTC | 2 cut(s) | 920, 1298 |
| BstMBI | GATC | 5 cut(s) | 505, 610, 783, 788, 1315 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 145, 224, 581, 667, 853 |
| BstNI | CCWGG | 4 cut(s) | 615, 748, 765, 1343 |
| BstNSI | RCATGY | 1 cut(s) | 703 |
| BstSCI | CCNGG | 6 cut(s) | 76, 613, 746, 763, 917, 1341 |
| BstSFI | CTRYAG | 1 cut(s) | 202 |
| BstSLI | GKGCMC | 2 cut(s) | 672, 739 |
| BstV1I | GCAGC | 3 cut(s) | 587, 961, 1217 |
| BstV2I | GAAGAC | 1 cut(s) | 696 |
| BstX2I | RGATCY | 1 cut(s) | 788 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 679 |
| BstYI | RGATCY | 1 cut(s) | 788 |
| Bsu15I | ATCGAT | 2 cut(s) | 782, 798 |
| BsuI | GTATCC | 2 cut(s) | 120, 310 |
| BsuRI | GGCC | 7 cut(s) | 661, 715, 737, 751, 1133, 1341, 1367 |
| BsuTUI | ATCGAT | 2 cut(s) | 782, 798 |
| BtsCI | GGATG | 2 cut(s) | 58, 892 |
| Cac8I | GCNNGC | 2 cut(s) | 563, 1203 |
| CfoI | GCGC | 2 cut(s) | 847, 975 |
| Cfr13I | GGNCC | 6 cut(s) | 659, 682, 714, 735, 736, 1339 |
| ClaI | ATCGAT | 2 cut(s) | 782, 798 |
| CseI | GACGC | 1 cut(s) | 417 |
| Csp6I | GTAC | 1 cut(s) | 365 |
| CviAII | CATG | 7 cut(s) | 106, 149, 592, 623, 700, 907, 1024 |
| CviQI | GTAC | 1 cut(s) | 365 |
| DdeI | CTNAG | 9 cut(s) | 2, 38, 183, 939, 1044, 1113, 1230, 1236, 1355 |
| DpnI | GATC | 5 cut(s) | 507, 612, 785, 790, 1317 |
| DpnII | GATC | 5 cut(s) | 505, 610, 783, 788, 1315 |
| DraI | TTTAAA | 1 cut(s) | 808 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 934 |
| DriI | GACNNNNNGTC | 1 cut(s) | 680 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 934 |
| EaeI | YGGCCR | 1 cut(s) | 1131 |
| Eam1104I | CTCTTC | 1 cut(s) | 834 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 680 |
| EarI | CTCTTC | 1 cut(s) | 834 |
| EciI | GGCGGA | 1 cut(s) | 1184 |
| Eco130I | CCWWGG | 3 cut(s) | 312, 678, 710 |
| Eco147I | AGGCCT | 1 cut(s) | 751 |
| Eco24I | GRGCYC | 1 cut(s) | 739 |
| Eco47I | GGWCC | 1 cut(s) | 682 |
| Eco57I | CTGAAG | 2 cut(s) | 1241, 1313 |
| Eco88I | CYCGRG | 1 cut(s) | 1079 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 693, 1346 |
| EcoO109I | RGGNCCY | 2 cut(s) | 714, 1339 |
| EcoRII | CCWGG | 4 cut(s) | 613, 746, 763, 1341 |
| EcoT14I | CCWWGG | 3 cut(s) | 312, 678, 710 |
| EcoT38I | GRGCYC | 1 cut(s) | 739 |
| ErhI | CCWWGG | 3 cut(s) | 312, 678, 710 |
| Esp3I | CGTCTC | 1 cut(s) | 1298 |
| FaeI | CATG | 7 cut(s) | 109, 152, 595, 626, 703, 910, 1027 |
| FaqI | GGGAC | 4 cut(s) | 329, 668, 708, 1034 |
| FatI | CATG | 7 cut(s) | 105, 148, 591, 622, 699, 906, 1023 |
| FauI | CCCGC | 1 cut(s) | 554 |
| FbaI | TGATCA | 1 cut(s) | 1315 |
| FblI | GTMKAC | 1 cut(s) | 431 |
| Fnu4HI | GCNGC | 3 cut(s) | 576, 950, 1206 |
| FokI | GGATG | 2 cut(s) | 65, 899 |
| FriOI | GRGCYC | 1 cut(s) | 739 |
| Fsp4HI | GCNGC | 3 cut(s) | 576, 950, 1206 |
| FspBI | CTAG | 9 cut(s) | 66, 110, 438, 471, 581, 711, 945, 965, 1408 |
| GlaI | GCGC | 2 cut(s) | 846, 974 |
| GluI | GCNGC | 3 cut(s) | 576, 950, 1206 |
| GsaI | CCCAGC | 2 cut(s) | 104, 427 |
| GsuI | CTGGAG | 2 cut(s) | 620, 1364 |
| HaeIII | GGCC | 7 cut(s) | 661, 715, 737, 751, 1133, 1341, 1367 |
| HapII | CCGG | 2 cut(s) | 77, 919 |
| HgaI | GACGC | 1 cut(s) | 417 |
| HhaI | GCGC | 2 cut(s) | 847, 975 |
| Hin1I | GRCGYC | 1 cut(s) | 428 |
| Hin1II | CATG | 7 cut(s) | 109, 152, 595, 626, 703, 910, 1027 |
| Hin6I | GCGC | 2 cut(s) | 845, 973 |
| HinP1I | GCGC | 2 cut(s) | 845, 973 |
| HincII | GTYRAC | 2 cut(s) | 958, 988 |
| HindII | GTYRAC | 2 cut(s) | 958, 988 |
| HindIII | AAGCTT | 1 cut(s) | 813 |
| HinfI | GANTC | 9 cut(s) | 26, 489, 631, 800, 928, 1094, 1177, 1190, 1234 |
| HpaII | CCGG | 2 cut(s) | 77, 919 |
| HphI | GGTGA | 3 cut(s) | 169, 699, 750 |
| Hpy166II | GTNNAC | 3 cut(s) | 432, 958, 988 |
| Hpy188I | TCNGA | 4 cut(s) | 186, 513, 788, 1009 |
| Hpy188III | TCNNGA | 4 cut(s) | 471, 868, 995, 1181 |
| Hpy8I | GTNNAC | 3 cut(s) | 432, 958, 988 |
| Hpy99I | CGWCG | 1 cut(s) | 528 |
| HpyAV | CCTTC | 9 cut(s) | 475, 689, 762, 872, 1100, 1216, 1249, 1288, 1342 |
| HpyCH4III | ACNGT | 1 cut(s) | 980 |
| HpyCH4IV | ACGT | 4 cut(s) | 352, 526, 643, 990 |
| HpyCH4V | TGCA | 3 cut(s) | 148, 626, 1205 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 145, 224, 581, 667, 853 |
| HpyF3I | CTNAG | 9 cut(s) | 2, 38, 183, 939, 1044, 1113, 1230, 1236, 1355 |
| HpySE526I | ACGT | 4 cut(s) | 352, 526, 643, 990 |
| Hsp92I | GRCGYC | 1 cut(s) | 428 |
| Hsp92II | CATG | 7 cut(s) | 109, 152, 595, 626, 703, 910, 1027 |
| HspAI | GCGC | 2 cut(s) | 845, 973 |
| Ksp22I | TGATCA | 1 cut(s) | 1315 |
| Kzo9I | GATC | 5 cut(s) | 505, 610, 783, 788, 1315 |
| LmnI | GCTCC | 1 cut(s) | 1216 |
| Lsp1109I | GCAGC | 3 cut(s) | 587, 961, 1217 |
| LweI | GCATC | 3 cut(s) | 788, 904, 1188 |
| MaeI | CTAG | 9 cut(s) | 66, 110, 438, 471, 581, 711, 945, 965, 1408 |
| MaeII | ACGT | 4 cut(s) | 352, 526, 643, 990 |
| MaeIII | GTNAC | 4 cut(s) | 60, 88, 251, 541 |
| MalI | GATC | 5 cut(s) | 507, 612, 785, 790, 1317 |
| MboI | GATC | 5 cut(s) | 505, 610, 783, 788, 1315 |
| MboII | GAAGA | 8 cut(s) | 263, 307, 500, 696, 851, 883, 923, 1264 |
| MfeI | CAATTG | 1 cut(s) | 663 |
| MflI | RGATCY | 1 cut(s) | 788 |
| MhlI | GDGCHC | 2 cut(s) | 672, 739 |
| MlsI | TGGCCA | 1 cut(s) | 1133 |
| MluNI | TGGCCA | 1 cut(s) | 1133 |
| MlyI | GAGTC | 3 cut(s) | 20, 922, 1228 |
| Mox20I | TGGCCA | 1 cut(s) | 1133 |
| MroXI | GAANNNNTTC | 1 cut(s) | 270 |
| MscI | TGGCCA | 1 cut(s) | 1133 |
| MseI | TTAA | 8 cut(s) | 189, 291, 387, 417, 531, 807, 1335, 1362 |
| Msp20I | TGGCCA | 1 cut(s) | 1133 |
| MspCI | CTTAAG | 1 cut(s) | 290 |
| MspI | CCGG | 2 cut(s) | 77, 919 |
| MspR9I | CCNGG | 6 cut(s) | 78, 615, 748, 765, 919, 1343 |
| MunI | CAATTG | 1 cut(s) | 663 |
| MvaI | CCWGG | 4 cut(s) | 615, 748, 765, 1343 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 145, 224, 581, 667, 853 |
| NciI | CCSGG | 2 cut(s) | 78, 919 |
| NdeII | GATC | 5 cut(s) | 505, 610, 783, 788, 1315 |
| NlaIII | CATG | 7 cut(s) | 109, 152, 595, 626, 703, 910, 1027 |
| NlaIV | GGNNCC | 4 cut(s) | 660, 684, 716, 737 |
| NmeAIII | GCCGAG | 1 cut(s) | 910 |
| NmuCI | GTSAC | 2 cut(s) | 251, 541 |
| NspI | RCATGY | 1 cut(s) | 703 |
| NspV | TTCGAA | 1 cut(s) | 492 |
| PaeR7I | CTCGAG | 1 cut(s) | 1079 |
| PceI | AGGCCT | 1 cut(s) | 751 |
| PdmI | GAANNNNTTC | 1 cut(s) | 270 |
| PfeI | GAWTC | 6 cut(s) | 489, 631, 800, 1094, 1177, 1190 |
| PfoI | TCCNGGA | 2 cut(s) | 613, 763 |
| PkrI | GCNGC | 3 cut(s) | 577, 951, 1207 |
| PleI | GAGTC | 3 cut(s) | 20, 922, 1228 |
| PpsI | GAGTC | 3 cut(s) | 20, 922, 1228 |
| PshBI | ATTAAT | 1 cut(s) | 189 |
| Psp6I | CCWGG | 4 cut(s) | 613, 746, 763, 1341 |
| PspFI | CCCAGC | 2 cut(s) | 100, 423 |
| PspGI | CCWGG | 4 cut(s) | 613, 746, 763, 1341 |
| PspN4I | GGNNCC | 4 cut(s) | 660, 684, 716, 737 |
| PspOMI | GGGCCC | 1 cut(s) | 735 |
| PspPI | GGNCC | 6 cut(s) | 659, 682, 714, 735, 736, 1339 |
| PspXI | VCTCGAGB | 1 cut(s) | 1079 |
| PsuI | RGATCY | 1 cut(s) | 788 |
| RsaI | GTAC | 1 cut(s) | 366 |
| RsaNI | GTAC | 1 cut(s) | 365 |
| SaqAI | TTAA | 8 cut(s) | 189, 291, 387, 417, 531, 807, 1335, 1362 |
| SatI | GCNGC | 3 cut(s) | 576, 950, 1206 |
| Sau3AI | GATC | 5 cut(s) | 505, 610, 783, 788, 1315 |
| Sau96I | GGNCC | 6 cut(s) | 659, 682, 714, 735, 736, 1339 |
| SchI | GAGTC | 3 cut(s) | 20, 922, 1228 |
| ScrFI | CCNGG | 6 cut(s) | 78, 615, 748, 765, 919, 1343 |
| SduI | GDGCHC | 2 cut(s) | 672, 739 |
| SfaNI | GCATC | 3 cut(s) | 788, 904, 1188 |
| SfcI | CTRYAG | 1 cut(s) | 202 |
| Sfr274I | CTCGAG | 1 cut(s) | 1079 |
| SfuI | TTCGAA | 1 cut(s) | 492 |
| SinI | GGWCC | 1 cut(s) | 682 |
| SlaI | CTCGAG | 1 cut(s) | 1079 |
| SmlI | CTYRAG | 4 cut(s) | 290, 368, 866, 1079 |
| SmoI | CTYRAG | 4 cut(s) | 290, 368, 866, 1079 |
| SseBI | AGGCCT | 1 cut(s) | 751 |
| SsiI | CCGC | 2 cut(s) | 561, 1169 |
| SspMI | CTAG | 9 cut(s) | 66, 110, 438, 471, 581, 711, 945, 965, 1408 |
| StuI | AGGCCT | 1 cut(s) | 751 |
| StyD4I | CCNGG | 6 cut(s) | 76, 613, 746, 763, 917, 1341 |
| StyI | CCWWGG | 3 cut(s) | 312, 678, 710 |
| TaaI | ACNGT | 1 cut(s) | 980 |
| TaiI | ACGT | 4 cut(s) | 355, 529, 646, 993 |
| TaqI | TCGA | 6 cut(s) | 492, 536, 782, 798, 897, 1080 |
| TaqII | GACCGA | 1 cut(s) | 1232 |
| TatI | WGTACW | 1 cut(s) | 364 |
| TfiI | GAWTC | 6 cut(s) | 489, 631, 800, 1094, 1177, 1190 |
| Tru1I | TTAA | 8 cut(s) | 189, 291, 387, 417, 531, 807, 1335, 1362 |
| Tru9I | TTAA | 8 cut(s) | 189, 291, 387, 417, 531, 807, 1335, 1362 |
| TseFI | GTSAC | 2 cut(s) | 251, 541 |
| TseI | GCWGC | 3 cut(s) | 575, 949, 1205 |
| Tsp45I | GTSAC | 2 cut(s) | 251, 541 |
| TspDTI | ATGAA | 4 cut(s) | 263, 611, 708, 744 |
| TspGWI | ACGGA | 4 cut(s) | 19, 133, 560, 1322 |
| Vha464I | CTTAAG | 1 cut(s) | 290 |
| VpaK11BI | GGWCC | 1 cut(s) | 682 |
| VspI | ATTAAT | 1 cut(s) | 189 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 693, 1346 |
| XapI | RAATTY | 5 cut(s) | 242, 267, 460, 998, 1060 |
| XbaI | TCTAGA | 1 cut(s) | 470 |
| XceI | RCATGY | 1 cut(s) | 703 |
| XhoI | CTCGAG | 1 cut(s) | 1079 |
| XmaJI | CCTAGG | 1 cut(s) | 710 |
| XmiI | GTMKAC | 1 cut(s) | 431 |
| XmnI | GAANNNNTTC | 1 cut(s) | 270 |
| XspI | CTAG | 9 cut(s) | 66, 110, 438, 471, 581, 711, 945, 965, 1408 |