Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010190.1

Orthogroup ID

OG0001094

Physical Location & Seq

Genomic Coordinates Reverse (-)

22596 .. 30241

Gene Structure 7646 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010190.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

atgtcttctaataccaaaagcttcagcagcagttccagtgaagatgacaatgaacttaggagagggccatggactcttgaagaagacactcttctgattcaatacatagctcgtcacggtgaaggccgatggaatctgctagcaaatcgggcaggattacggagaactgggaagagttgcagattgagatggttgaactatctgaaaccagatgttaagcgcggaaatcttactccggaagaacagctgttgattcttgacctccactccaagtggggaaataggtggtcgaaaattgcgcaatacttacccggaagaacagacaatgaaatcaagaactactggagaactagagtgcagaaacaagcaaagcatcttaagattgataccgacagcacagagtttcagaatattattaggtgcttttggatgcctagattgctgcagaagataggagaccaaaaccaattagctgcttctcatcagcattcaataacagcaccaccatcacagccacaatttactgagcaaggagctgttgacatgagcggatttgtatacgatttggatatcaaaaagcagaacacagaatgcattttgccttcagagttaccaatggagagctcaaacacttctcaattttcagactattacccttctagttcttttggtggagccatagtgcgcaatgatcactttgtaaacaacaatagccatgacatggaagtcttcaacttggggaattctgctgctgctgatacttgctatgtgccagaaagcgaaagcaactggcttgaaattgatttttcatgtagcatgtggaacatggatgaattgttgcagagggttttcttcaatttgagccgtccggtgagggatctgaggtccgattgcggcgtcggaaaattaaacaacggagtactgaggtccgattgcggagtcggagcaggtgcagcgctccgagtcgaagtaggctggaatcggagctgttttcgaatcgccgcaacaacaattgaattcgacggctcacggaggtctgattggcaaggccggggaagcagtagcttttgtagtcgccggagacccaccggaagttggccggaggtcggccggagttggccagaggtcggccggaatctctccgagaggctcgactctcctcccttcagatttgtcaacatgttcacttcaaggaagaagatccacaaggataaggatgctgaacctactgagtttgaggagtctgttgcacagtcaatctttgatttggagaacacaaaccaagagctgaaaagtgacttgaaggacttgtacattaactctgcagctctcgttgatgttgctggaaatcggaaggctgttgttatccatgttccttatagactgaggaaggcttaccgcaagatccatgttaggcttgtgagggagcttgagaagaagttcagtggaaaggatgtgattctgattgccacacgtaggattgtgaggcctccaaagaaaggctctgctgctcaacgtccacgcactcgcaccctgaccgctgttcatgaagcaatattggaggatgttgttttgcctgctgaaattgttggcaagcgcaccagatatcgccttgatggttccaagatcatgaaggttttccttgacccgaaagagcgaaacaacaccgagtataagttggagagcttttctgcagtttaccgtaagctttcgggaaaagatgttgtttttgaataccccattaccgaggcctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009753 GO:0009755 GO:0009791 GO:0009867 GO:0009889 GO:0009908 GO:0009987 GO:0010033 GO:0010468 GO:0010476 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071395 GO:0071396 GO:0071495 GO:0080086 GO:0080090 GO:0090567 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

584

Amino Acids

66.86

Weight (kDa)

9.23

Isoelectric Point (pI)

52.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001094)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48830 AT1G48830 AT3G02560 AT3G02560 AT3G02560 AT5G16130
fragaria_vesca	FvH4_4g09890 FvH4_5g11920 FvH4_5g11930
malus_domestica	MD01G1071000.v1.1 MD06G1217200.v1.1 MD06G1217300.v1.1 MD13G1256100.v1.1 MD14G1227500.v1.1 MD14G1227600.v1.1
prunus_persica	Prupe.1G086800_v2.0.a1 Prupe.1G086800_v2.0.a1 Prupe.3G016800_v2.0.a1 Prupe.3G016800_v2.0.a1 Prupe.3G016800_v2.0.a1 Prupe.5G222400_v2.0.a1 Prupe.5G222500_v2.0.a1 Prupe.5G222500_v2.0.a1
pyrus_communis	pycom06g19360 pycom13g22690 pycom14g18900
rosa_chinensis	RchiOBHm_Chr4g0402641 RchiOBHm_Chr7g0185561 RchiOBHm_Chr7g0185571
rosa_laevigata	RLG00000004898 RLG00000004899 RLG00000009059
rosa_multiflora	Rmu_co8253147.1_g000001 Rmu_sc0009850.1_g000017 Rmu_sc0010190.1_g000009 Rmu_sc0013411.1_g000010 Rmu_sc0022885.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268800 Rroxscaffold_3G00268810 Rroxscaffold_5G00347360
rosa_rugosa	Rorug04G0037200 Rorug04G0037300 Rorug06G0470200 Rorug06G0470200
rosa_samantha	Rh4AG114900 Rh4BG107200 Rh4CG121600 Rh4DG107100 Rh7AG072200 Rh7AG072300 Rh7BG075500 Rh7BG075700 Rh7CG075600 Rh7CG075800 Rh7DG075300 Rh7DG075400
rosa_wichuraiana	Rw4G009160 Rw7G006280 Rw7G006290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	938
AasI	GACNNNNNNGTC	1 cut(s)	725
Acc16I	TGCGCA	2 cut(s)	300, 686
Acc36I	ACCTGC	1 cut(s)	938
AccB7I	CCANNNNNTGG	1 cut(s)	721
AccBSI	CCGCTC	1 cut(s)	549
AccI	GTMKAC	1 cut(s)	558
AccII	CGCG	1 cut(s)	222
AccIII	TCCGGA	1 cut(s)	235
AciI	CCGC	7 cut(s)	222, 549, 894, 936, 1002, 1399, 1539
AclWI	GGATC	3 cut(s)	885, 1195, 1399
AcoI	YGGCCR	4 cut(s)	1097, 1108, 1118, 1129
AcsI	RAATTY	2 cut(s)	742, 1016
AcuI	CTGAAG	3 cut(s)	7, 588, 1150
AcyI	GRCGYC	1 cut(s)	897
AfaI	GTAC	2 cut(s)	921, 1313
AfeI	AGCGCT	1 cut(s)	957
AfiI	CCNNNNNNNGG	6 cut(s)	721, 1095, 1106, 1127, 1476, 1499
AflII	CTTAAG	1 cut(s)	377
AflIII	ACRYGT	2 cut(s)	1179, 1472
Alw21I	GWGCWC	1 cut(s)	626
Alw26I	GTCTC	2 cut(s)	450, 1075
AlwI	GGATC	3 cut(s)	885, 1195, 1399
Aor13HI	TCCGGA	1 cut(s)	235
Aor51HI	AGCGCT	1 cut(s)	957
AoxI	GGCC	9 cut(s)	65, 124, 1048, 1097, 1108, 1118, 1129, 1487, 1749
ApeKI	GCWGC	8 cut(s)	27, 442, 473, 749, 752, 953, 1325, 1508
ApoI	RAATTY	2 cut(s)	742, 1016
Asp700I	GAANNNNTTC	2 cut(s)	1439, 1637
AspLEI	GCGC	5 cut(s)	222, 301, 687, 958, 1599
AspS9I	GGNCC	3 cut(s)	65, 885, 927
AsuC2I	CCSGG	2 cut(s)	312, 1052
AsuHPI	GGTGA	2 cut(s)	131, 883
AsuII	TTCGAA	1 cut(s)	994
AsuNHI	GCTAGC	1 cut(s)	139
AvaII	GGWCC	2 cut(s)	885, 927
BalI	TGGCCA	1 cut(s)	1120
BanII	GRGCYC	1 cut(s)	626
BarI	GAAGNNNNNNTAC	2 cut(s)	1295, 1327
BbsI	GAAGAC	2 cut(s)	90, 721
Bbv12I	GWGCWC	1 cut(s)	626
BbvI	GCAGC	8 cut(s)	39, 429, 460, 736, 739, 965, 1337, 1495
BccI	CCATC	4 cut(s)	123, 183, 514, 1610
BceAI	ACGGC	2 cut(s)	849, 1039
BclI	TGATCA	1 cut(s)	691
BcnI	CCSGG	2 cut(s)	312, 1052
BcoDI	GTCTC	2 cut(s)	450, 1075
BfaI	CTAG	5 cut(s)	140, 351, 435, 660, 1753
BfmI	CTRYAG	3 cut(s)	443, 1323, 1692
BfoI	RGCGCY	1 cut(s)	959
BfrI	CTTAAG	1 cut(s)	377
BfuAI	ACCTGC	1 cut(s)	938
BmcAI	AGTACT	1 cut(s)	921
Bme1390I	CCNGG	2 cut(s)	312, 1052
Bme18I	GGWCC	2 cut(s)	885, 927
BmgT120I	GGNCC	3 cut(s)	65, 885, 927
BmiI	GGNNCC	2 cut(s)	676, 1621
BmrFI	CCNGG	2 cut(s)	312, 1052
BmrI	ACTGGG	1 cut(s)	177
BmsI	GCATC	3 cut(s)	382, 420, 1207
BmtI	GCTAGC	1 cut(s)	143
BmuI	ACTGGG	1 cut(s)	177
BpiI	GAAGAC	2 cut(s)	90, 721
BpmI	CTGGAG	1 cut(s)	364
Bpu14I	TTCGAA	1 cut(s)	994
BpuEI	CTTGAG	1 cut(s)	1451
BpuMI	CCSGG	2 cut(s)	312, 1052
BsaAI	YACGTR	1 cut(s)	1475
BsaHI	GRCGYC	1 cut(s)	897
BsaI	GGTCTC	2 cut(s)	450, 1075
BsaJI	CCNNGG	3 cut(s)	68, 1051, 1746
BsaWI	WCCGGW	3 cut(s)	235, 868, 1088
BsaXI	ACNNNNNCTCC	4 cut(s)	251, 281, 666, 696
Bsc4I	CCNNNNNNNGG	6 cut(s)	721, 1095, 1106, 1127, 1476, 1499
Bse1I	ACTGG	4 cut(s)	36, 172, 347, 794
Bse3DI	GCAATG	1 cut(s)	694
BseAI	TCCGGA	1 cut(s)	235
BseDI	CCNNGG	3 cut(s)	68, 1051, 1746
BseGI	GGATG	5 cut(s)	435, 835, 1222, 1459, 1570
BseLI	CCNNNNNNNGG	6 cut(s)	721, 1095, 1106, 1127, 1476, 1499
BseMI	GCAATG	1 cut(s)	694
BseMII	CTCAG	5 cut(s)	516, 872, 914, 1221, 1376
BseNI	ACTGG	4 cut(s)	36, 172, 347, 794
BseRI	GAGGAG	2 cut(s)	1149, 1253
BseX3I	CGGCCG	2 cut(s)	1108, 1129
BseXI	GCAGC	8 cut(s)	39, 429, 460, 736, 739, 965, 1337, 1495
BsgI	GTGCAG	2 cut(s)	377, 972
Bsh1236I	CGCG	1 cut(s)	222
Bsh1285I	CGRYCG	2 cut(s)	1111, 1132
BshFI	GGCC	9 cut(s)	67, 126, 1050, 1099, 1110, 1120, 1131, 1489, 1751
BsiEI	CGRYCG	2 cut(s)	1111, 1132
BsiHKAI	GWGCWC	1 cut(s)	626
BsiSI	CCGG	9 cut(s)	236, 312, 869, 1051, 1078, 1089, 1100, 1111, 1132
BslI	CCNNNNNNNGG	6 cut(s)	721, 1095, 1106, 1127, 1476, 1499
BsmAI	GTCTC	2 cut(s)	450, 1075
BsmI	GAATGC	2 cut(s)	487, 596
BsnI	GGCC	9 cut(s)	67, 126, 1050, 1099, 1110, 1120, 1131, 1489, 1751
Bso31I	GGTCTC	2 cut(s)	450, 1075
Bsp119I	TTCGAA	1 cut(s)	994
Bsp1286I	GDGCHC	1 cut(s)	626
Bsp13I	TCCGGA	1 cut(s)	235
Bsp1407I	TGTACA	1 cut(s)	1311
Bsp143I	GATC	5 cut(s)	691, 877, 1200, 1404, 1626
Bsp19I	CCATGG	1 cut(s)	68
BspACI	CCGC	7 cut(s)	222, 549, 894, 936, 1002, 1399, 1539
BspANI	GGCC	9 cut(s)	67, 126, 1050, 1099, 1110, 1120, 1131, 1489, 1751
BspCNI	CTCAG	5 cut(s)	517, 873, 915, 1222, 1377
BspEI	TCCGGA	1 cut(s)	235
BspFNI	CGCG	1 cut(s)	222
BspHI	TCATGA	2 cut(s)	1546, 1629
BspLI	GGNNCC	2 cut(s)	676, 1621
BspMAI	CTGCAG	3 cut(s)	447, 1327, 1696
BspMI	ACCTGC	1 cut(s)	938
BspOI	GCTAGC	1 cut(s)	143
BspPI	GGATC	3 cut(s)	885, 1195, 1399
BspT104I	TTCGAA	1 cut(s)	994
BspTI	CTTAAG	1 cut(s)	377
BspTNI	GGTCTC	2 cut(s)	450, 1075
BsrBI	CCGCTC	1 cut(s)	549
BsrDI	GCAATG	1 cut(s)	694
BsrGI	TGTACA	1 cut(s)	1311
BsrI	ACTGG	4 cut(s)	36, 172, 347, 794
BssECI	CCNNGG	3 cut(s)	68, 1051, 1746
BssMI	GATC	5 cut(s)	691, 877, 1200, 1404, 1626
BssNAI	GTATAC	1 cut(s)	559
BssNI	GRCGYC	1 cut(s)	897
BssT1I	CCWWGG	1 cut(s)	68
Bst1107I	GTATAC	1 cut(s)	559
Bst4CI	ACNGT	3 cut(s)	119, 1254, 1703
Bst6I	CTCTTC	2 cut(s)	96, 167
BstACI	GRCGYC	1 cut(s)	897
BstAFI	CTTAAG	1 cut(s)	377
BstAUI	TGTACA	1 cut(s)	1311
BstBAI	YACGTR	1 cut(s)	1475
BstBI	TTCGAA	1 cut(s)	994
BstC8I	GCNNGC	3 cut(s)	141, 1578, 1595
BstDEI	CTNAG	6 cut(s)	56, 525, 881, 923, 1230, 1385
BstDSI	CCRYGG	1 cut(s)	68
BstF5I	GGATG	5 cut(s)	435, 835, 1222, 1459, 1570
BstFNI	CGCG	1 cut(s)	222
BstH2I	RGCGCY	1 cut(s)	959
BstHHI	GCGC	5 cut(s)	222, 301, 687, 958, 1599
BstKTI	GATC	5 cut(s)	694, 880, 1203, 1407, 1629
BstMAI	GTCTC	2 cut(s)	450, 1075
BstMBI	GATC	5 cut(s)	691, 877, 1200, 1404, 1626
BstMCI	CGRYCG	2 cut(s)	1111, 1132
BstMWI	GCNNNNNNNGC	5 cut(s)	27, 149, 439, 953, 1056
BstNSI	RCATGY	2 cut(s)	820, 1183
BstSCI	CCNGG	2 cut(s)	310, 1050
BstSFI	CTRYAG	3 cut(s)	443, 1323, 1692
BstUI	CGCG	1 cut(s)	222
BstV1I	GCAGC	8 cut(s)	39, 429, 460, 736, 739, 965, 1337, 1495
BstV2I	GAAGAC	2 cut(s)	90, 721
BstX2I	RGATCY	3 cut(s)	877, 1200, 1404
BstYI	RGATCY	3 cut(s)	877, 1200, 1404
BstZ17I	GTATAC	1 cut(s)	559
BstZI	CGGCCG	2 cut(s)	1108, 1129
BsuRI	GGCC	9 cut(s)	67, 126, 1050, 1099, 1110, 1120, 1131, 1489, 1751
BtgI	CCRYGG	1 cut(s)	68
BtsCI	GGATG	5 cut(s)	435, 835, 1222, 1459, 1570
BtsIMutI	CAGTG	2 cut(s)	43, 1450
BveI	ACCTGC	1 cut(s)	938
Cac8I	GCNNGC	3 cut(s)	141, 1578, 1595
CciI	TCATGA	2 cut(s)	1546, 1629
CfoI	GCGC	5 cut(s)	222, 301, 687, 958, 1599
Cfr13I	GGNCC	3 cut(s)	65, 885, 927
CseI	GACGC	1 cut(s)	886
Csp6I	GTAC	2 cut(s)	920, 1312
CviQI	GTAC	2 cut(s)	920, 1312
DdeI	CTNAG	6 cut(s)	56, 525, 881, 923, 1230, 1385
DpnI	GATC	5 cut(s)	693, 879, 1202, 1406, 1628
DpnII	GATC	5 cut(s)	691, 877, 1200, 1404, 1626
DrdI	GACNNNNNNGTC	1 cut(s)	725
DseDI	GACNNNNNNGTC	1 cut(s)	725
EaeI	YGGCCR	4 cut(s)	1097, 1108, 1118, 1129
EagI	CGGCCG	2 cut(s)	1108, 1129
Eam1104I	CTCTTC	2 cut(s)	96, 167
EarI	CTCTTC	2 cut(s)	96, 167
Ecl136II	GAGCTC	1 cut(s)	624
EclXI	CGGCCG	2 cut(s)	1108, 1129
Eco130I	CCWWGG	1 cut(s)	68
Eco147I	AGGCCT	2 cut(s)	1489, 1751
Eco24I	GRGCYC	1 cut(s)	626
Eco31I	GGTCTC	2 cut(s)	450, 1075
Eco32I	GATATC	2 cut(s)	571, 1607
Eco47I	GGWCC	2 cut(s)	885, 927
Eco47III	AGCGCT	1 cut(s)	957
Eco52I	CGGCCG	2 cut(s)	1108, 1129
Eco53kI	GAGCTC	1 cut(s)	624
Eco57I	CTGAAG	3 cut(s)	7, 588, 1150
EcoICRI	GAGCTC	1 cut(s)	624
EcoRI	GAATTC	2 cut(s)	742, 1016
EcoRV	GATATC	2 cut(s)	571, 1607
EcoT14I	CCWWGG	1 cut(s)	68
EcoT22I	ATGCAT	1 cut(s)	596
EcoT38I	GRGCYC	1 cut(s)	626
ErhI	CCWWGG	1 cut(s)	68
FalI	AAGNNNNNCTT	2 cut(s)	75, 107
FbaI	TGATCA	1 cut(s)	691
FblI	GTMKAC	1 cut(s)	558
FokI	GGATG	5 cut(s)	442, 842, 1229, 1466, 1577
FriOI	GRGCYC	1 cut(s)	626
FspBI	CTAG	5 cut(s)	140, 351, 435, 660, 1753
FspI	TGCGCA	2 cut(s)	300, 686
GlaI	GCGC	5 cut(s)	221, 300, 686, 957, 1598
GsuI	CTGGAG	1 cut(s)	364
HaeII	RGCGCY	1 cut(s)	959
HaeIII	GGCC	9 cut(s)	67, 126, 1050, 1099, 1110, 1120, 1131, 1489, 1751
HapII	CCGG	9 cut(s)	236, 312, 869, 1051, 1078, 1089, 1100, 1111, 1132
HgaI	GACGC	1 cut(s)	886
HhaI	GCGC	5 cut(s)	222, 301, 687, 958, 1599
Hin1I	GRCGYC	1 cut(s)	897
Hin6I	GCGC	5 cut(s)	220, 299, 685, 956, 1597
HinP1I	GCGC	5 cut(s)	220, 299, 685, 956, 1597
HincII	GTYRAC	2 cut(s)	541, 1177
HindII	GTYRAC	2 cut(s)	541, 1177
HindIII	AAGCTT	2 cut(s)	19, 1706
HpaII	CCGG	9 cut(s)	236, 312, 869, 1051, 1078, 1089, 1100, 1111, 1132
HphI	GGTGA	2 cut(s)	131, 883
Hpy166II	GTNNAC	7 cut(s)	541, 559, 703, 1177, 1185, 1520, 1699
Hpy188III	TCNNGA	7 cut(s)	77, 236, 257, 334, 1547, 1630, 1713
Hpy8I	GTNNAC	7 cut(s)	541, 559, 703, 1177, 1185, 1520, 1699
Hpy99I	CGWCG	2 cut(s)	902, 1025
HpyAV	CCTTC	8 cut(s)	116, 612, 666, 1174, 1297, 1348, 1384, 1627
HpyCH4III	ACNGT	3 cut(s)	119, 1254, 1703
HpyCH4IV	ACGT	2 cut(s)	1474, 1516
HpyCH4V	TGCA	9 cut(s)	180, 358, 445, 594, 841, 953, 1250, 1325, 1694
HpyF10VI	GCNNNNNNNGC	5 cut(s)	27, 149, 439, 953, 1056
HpyF3I	CTNAG	6 cut(s)	56, 525, 881, 923, 1230, 1385
HpySE526I	ACGT	2 cut(s)	1474, 1516
Hsp92I	GRCGYC	1 cut(s)	897
HspAI	GCGC	5 cut(s)	220, 299, 685, 956, 1597
Kpn2I	TCCGGA	1 cut(s)	235
Ksp22I	TGATCA	1 cut(s)	691
Kzo9I	GATC	5 cut(s)	691, 877, 1200, 1404, 1626
LmnI	GCTCC	6 cut(s)	533, 674, 944, 963, 984, 1426
Lsp1109I	GCAGC	8 cut(s)	39, 429, 460, 736, 739, 965, 1337, 1495
LweI	GCATC	3 cut(s)	382, 420, 1207
MaeI	CTAG	5 cut(s)	140, 351, 435, 660, 1753
MaeII	ACGT	2 cut(s)	1474, 1516
MaeIII	GTNAC	3 cut(s)	113, 609, 1295
MalI	GATC	5 cut(s)	693, 879, 1202, 1406, 1628
MbiI	CCGCTC	1 cut(s)	549
MboI	GATC	5 cut(s)	691, 877, 1200, 1404, 1626
MfeI	CAATTG	1 cut(s)	1011
MflI	RGATCY	3 cut(s)	877, 1200, 1404
MhlI	GDGCHC	1 cut(s)	626
MlsI	TGGCCA	1 cut(s)	1120
MluNI	TGGCCA	1 cut(s)	1120
MlyI	GAGTC	5 cut(s)	67, 948, 972, 1148, 1250
MmeI	TCCRAC	3 cut(s)	880, 922, 1659
Mox20I	TGGCCA	1 cut(s)	1120
Mph1103I	ATGCAT	1 cut(s)	596
MroI	TCCGGA	1 cut(s)	235
MroXI	GAANNNNTTC	2 cut(s)	1439, 1637
MscI	TGGCCA	1 cut(s)	1120
MseI	TTAA	4 cut(s)	216, 378, 908, 1317
Msp20I	TGGCCA	1 cut(s)	1120
MspA1I	CMGCKG	2 cut(s)	247, 1541
MspCI	CTTAAG	1 cut(s)	377
MspI	CCGG	9 cut(s)	236, 312, 869, 1051, 1078, 1089, 1100, 1111, 1132
MspR9I	CCNGG	2 cut(s)	312, 1052
MunI	CAATTG	1 cut(s)	1011
Mva1269I	GAATGC	2 cut(s)	487, 596
MvnI	CGCG	1 cut(s)	222
MwoI	GCNNNNNNNGC	5 cut(s)	27, 149, 439, 953, 1056
NciI	CCSGG	2 cut(s)	312, 1052
NcoI	CCATGG	1 cut(s)	68
NdeII	GATC	5 cut(s)	691, 877, 1200, 1404, 1626
NheI	GCTAGC	1 cut(s)	139
NlaIV	GGNNCC	2 cut(s)	676, 1621
NmuCI	GTSAC	2 cut(s)	113, 1295
NsbI	TGCGCA	2 cut(s)	300, 686
NsiI	ATGCAT	1 cut(s)	596
NspI	RCATGY	2 cut(s)	820, 1183
NspV	TTCGAA	1 cut(s)	994
PagI	TCATGA	2 cut(s)	1546, 1629
PaqCI	CACCTGC	1 cut(s)	938
PceI	AGGCCT	2 cut(s)	1489, 1751
PciI	ACATGT	1 cut(s)	1179
PctI	GAATGC	2 cut(s)	487, 596
PdmI	GAANNNNTTC	2 cut(s)	1439, 1637
PfeI	GAWTC	7 cut(s)	97, 133, 253, 979, 996, 1135, 1459
PflMI	CCANNNNNTGG	1 cut(s)	721
PleI	GAGTC	5 cut(s)	67, 947, 971, 1148, 1249
PpsI	GAGTC	5 cut(s)	67, 947, 971, 1148, 1249
Ppu21I	YACGTR	1 cut(s)	1475
PscI	ACATGT	1 cut(s)	1179
Psp124BI	GAGCTC	1 cut(s)	626
PspN4I	GGNNCC	2 cut(s)	676, 1621
PspPI	GGNCC	3 cut(s)	65, 885, 927
PstI	CTGCAG	3 cut(s)	447, 1327, 1696
PsuI	RGATCY	3 cut(s)	877, 1200, 1404
PvuII	CAGCTG	1 cut(s)	247
RsaI	GTAC	2 cut(s)	921, 1313
RsaNI	GTAC	2 cut(s)	920, 1312
SacI	GAGCTC	1 cut(s)	626
SaqAI	TTAA	4 cut(s)	216, 378, 908, 1317
Sau3AI	GATC	5 cut(s)	691, 877, 1200, 1404, 1626
Sau96I	GGNCC	3 cut(s)	65, 885, 927
ScaI	AGTACT	1 cut(s)	921
SchI	GAGTC	5 cut(s)	67, 948, 972, 1148, 1250
ScrFI	CCNGG	2 cut(s)	312, 1052
SduI	GDGCHC	1 cut(s)	626
SfaNI	GCATC	3 cut(s)	382, 420, 1207
SfcI	CTRYAG	3 cut(s)	443, 1323, 1692
SfuI	TTCGAA	1 cut(s)	994
SinI	GGWCC	2 cut(s)	885, 927
SmlI	CTYRAG	2 cut(s)	377, 1430
SmoI	CTYRAG	2 cut(s)	377, 1430
SseBI	AGGCCT	2 cut(s)	1489, 1751
SsiI	CCGC	7 cut(s)	222, 549, 894, 936, 1002, 1399, 1539
SspI	AATATT	2 cut(s)	412, 1557
SspMI	CTAG	5 cut(s)	140, 351, 435, 660, 1753
SstI	GAGCTC	1 cut(s)	626
StuI	AGGCCT	2 cut(s)	1489, 1751
StyD4I	CCNGG	2 cut(s)	310, 1050
StyI	CCWWGG	1 cut(s)	68
TaaI	ACNGT	3 cut(s)	119, 1254, 1703
TaiI	ACGT	2 cut(s)	1477, 1519
TaqI	TCGA	5 cut(s)	290, 966, 994, 1020, 1152
TatI	WGTACW	2 cut(s)	919, 1311
TauI	GCSGC	2 cut(s)	897, 1004
TfiI	GAWTC	7 cut(s)	97, 133, 253, 979, 996, 1135, 1459
Tru1I	TTAA	4 cut(s)	216, 378, 908, 1317
Tru9I	TTAA	4 cut(s)	216, 378, 908, 1317
TscAI	CASTG	2 cut(s)	43, 1450
TseFI	GTSAC	2 cut(s)	113, 1295
TseI	GCWGC	8 cut(s)	27, 442, 473, 749, 752, 953, 1325, 1508
Tsp45I	GTSAC	2 cut(s)	113, 1295
TspDTI	ATGAA	7 cut(s)	66, 342, 798, 846, 1535, 1563, 1646
TspGWI	ACGGA	3 cut(s)	175, 930, 1045
TspRI	CASTG	2 cut(s)	43, 1450
Van91I	CCANNNNNTGG	1 cut(s)	721
Vha464I	CTTAAG	1 cut(s)	377
VpaK11BI	GGWCC	2 cut(s)	885, 927
XapI	RAATTY	2 cut(s)	742, 1016
XceI	RCATGY	2 cut(s)	820, 1183
XmiI	GTMKAC	1 cut(s)	558
XmnI	GAANNNNTTC	2 cut(s)	1439, 1637
XspI	CTAG	5 cut(s)	140, 351, 435, 660, 1753
ZrmI	AGTACT	1 cut(s)	921
Zsp2I	ATGCAT	1 cut(s)	596

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.