Rroxscaffold_7G00159460

QWRF motif-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0001505
Physical Location & Seq
Reverse (-)
2666590 .. 2673328
6739 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00159460.1

Sequence Viewer

Length: 1782 bp
ATGGTAGCTGCTGTTTCGACGACATTGAACCCAAAAGCCGCCGCCTCCGGTCGTCCTCAGAAGGGTACCAGGCCTCCGCTACTACCCTCCGACCCCGAAAATGGTGTCGTTCCTCGCCGCCTCAAGTCTCGAGAAGTCACGTCCCGCTACATGTCGTCTTCTTCCTCCGCCTCCGCGGCTGCGTCTACTTGTGCCAATTCGAAACGGTGCGCCTCGCCGGCGGTCTCAAGGACCGGGGCGGCGAGTCCGATGCCGACGCCGCAGACGCTGAGGCGGTCGCAGTCGGTGGAGAGGAGGAGACCGGTCACTCCGAGACCTAATTCTTTGGATTTGAGGACCGGGAGTGGAGCTGCCGGCGGCGGTGAAATGTCGGCGGCTCAGAAGCTGCTGGTCACTTCGACGAGGAGTCTATCGGTTTCGTTTCAGGGCGAGTCGTACTCGCTCCAGGTGAGTAAAGCGAAGCGACCGCCGTCTCCGACTGCGAGGAAAGGCACGCCGGAGCGGAGGAAGGCTTCGACGCCGGCGAGGCCGGATCAGAGCGAGAATTCGAGGCCGATGGAGCAGTACCGGTGGCCGGCGAGGTTGAGGCCGGACACTTGTATGACCAGGAGCTTGGATTGTACGGTGGAGAGGAAGAAAGTGAATGGATCTGGTTCCAATGTGGTTAGGGCATTGCAAAATTCGCTGGGGAATGATCTTGATGGGAGACTGAGGTCTAGTTCGTGCAATTTGGGTTCTGTGAAAGCTACTGAGCCTTTTGATGAAGCTAGAGTCACACAGTCTGAAGCTGTGGCATCCTCTGATACTGATAGTGTGTCTTCTGGTAGTTCCAATTCGGGGCCTCACGAGCTCGGTGGAGGTGGCACTAATTGCTCTGCTGCTGTTGGACAAGCGCCACGTCCTAGAGGGATAGTGGTTCAGGCGAGGTTTTGGCAAGAGACTAACAATCTCTTGCGCAGACAGTCCGAGTATAAGGCTAATGGAACAAGAACTGTGGCCTCTCCGAAGGTTAACGAGGCCAATAGATTATCCATTGATAGTCCTGTGTCATCTCCTCGGGGTGTTTTGAATAGCAGAGGCCAGTTATCCCCAAGTCGTGGAGCTGCTAGGCCTGCATCGCCAAGTAAGCTCAGCCGGCCATCTGTATCATCCCCTTTGAGGGGAGTGAGCCCTTCTCGAGTAAGGAATGGAGTGTCAGCTACGCCAAGTAGTAACTTGAGCAACATGCCTTCGGTTTTAAGTTTTGCTGCTGATGTTCGAAGAGGGAAGGTCGGGGAGAATCGGATAGTTGATGCACATGTGGTGAGGCTATTACATAACCGGCTGTTGCAGTGGCGTTTTGTGAATGCTAGAGCTAATGCTGCACTAGCCGCACAGAGATCCAATGCAGAGATGATATATTTGGAAGAGTGTTCACTTATGGATCGGGATTACTCTAATTCCTTGTCGGGTGCCATCGAAGCTTTGAGGGCTAGCACACTCCGTCTTCCAGTGGTTGATGGAGCAAGGGCAGATGTCCACAATGTGAAGGATGCTATTTCTTCAGCAGTTGATGTGATGCAGGCAATGGCATCGTCAATATGCTTATTATTATCGAAGGTTGGGGAGGTGAACTCTTTGGCGGATGAACTTGCAAATGTAAGTGTCAAGGAGCATGCTTTGCTTGGTCAATGCAGGGATCTATTGTCAACAGTTGCAGCCATGCAGGTTGAGGAATGTAGCCTGAGAACACATATTCTACAACAAGAACGTGTACCTTCAAGCCTCACAGCAGAAGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
QWRF

Protein Analysis

593

Amino Acids

63.05

Weight (kDa)

10.46

Isoelectric Point (pI)

62.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
QWRF PF04484 271 - 464 2.8e-42 QWRF family
QWRF PF04484 463 - 555 7.7e-35 QWRF family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 956
Acc36I ACCTGC 1 cut(s) 1696
Acc65I GGTACC 1 cut(s) 65
AccB1I GGYRCC 2 cut(s) 65, 1451
AccB7I CCANNNNNTGG 1 cut(s) 1097
AccBSI CCGCTC 1 cut(s) 502
AccI GTMKAC 1 cut(s) 185
AccII CGCG 1 cut(s) 176
AclWI GGATC 5 cut(s) 540, 655, 1374, 1431, 1686
AcoI YGGCCR 2 cut(s) 572, 1136
AcsI RAATTY 2 cut(s) 544, 679
AcuI CTGAAG 2 cut(s) 804, 1527
AcyI GRCGYC 2 cut(s) 257, 518
AdeI CACNNNGTG 1 cut(s) 1525
AfaI GTAC 5 cut(s) 67, 437, 566, 622, 1755
AfiI CCNNNNNNNGG 8 cut(s) 62, 101, 574, 837, 1097, 1158, 1159, 1160
AflIII ACRYGT 3 cut(s) 150, 1297, 1750
AgeI ACCGGT 2 cut(s) 301, 567
AgsI TTSAA 3 cut(s) 28, 1069, 1761
AhdI GACNNNNNGTC 1 cut(s) 405
AjiI CACGTC 2 cut(s) 141, 899
AjnI CCWGG 3 cut(s) 68, 444, 605
Alw21I GWGCWC 1 cut(s) 852
Alw26I GTCTC 7 cut(s) 132, 229, 292, 307, 477, 700, 932
AlwI GGATC 5 cut(s) 540, 655, 1374, 1431, 1686
AlwNI CAGNNNCTG 2 cut(s) 268, 385
Ama87I CYCGRG 3 cut(s) 129, 1056, 1176
ApeKI GCWGC 9 cut(s) 8, 179, 350, 385, 878, 1103, 1247, 1361, 1697
ApoI RAATTY 2 cut(s) 544, 679
ArsI GACNNNNNNTTYG 2 cut(s) 90, 122
AsiGI ACCGGT 2 cut(s) 301, 567
Asp718I GGTACC 1 cut(s) 65
AspLEI GCGC 3 cut(s) 212, 895, 957
AspS9I GGNCC 3 cut(s) 231, 336, 839
AsuC2I CCSGG 2 cut(s) 235, 340
AsuHPI GGTGA 4 cut(s) 374, 460, 1315, 1621
AsuII TTCGAA 2 cut(s) 200, 1258
AsuNHI GCTAGC 1 cut(s) 1472
AvaI CYCGRG 3 cut(s) 129, 1056, 1176
AvaII GGWCC 2 cut(s) 231, 336
BanI GGYRCC 2 cut(s) 65, 1451
BanII GRGCYC 2 cut(s) 852, 1172
BauI CACGAG 1 cut(s) 845
BbsI GAAGAC 3 cut(s) 150, 810, 1478
Bbv12I GWGCWC 1 cut(s) 852
BbvCI CCTCAGC 1 cut(s) 269
BbvI GCAGC 8 cut(s) 166, 337, 372, 865, 1090, 1234, 1348, 1709
BccI CCATC 5 cut(s) 550, 695, 1147, 1463, 1493
BceAI ACGGC 1 cut(s) 454
BcgI CGANNNNNNTGC 4 cut(s) 232, 266, 1554, 1588
BciT130I CCWGG 3 cut(s) 70, 446, 607
BcnI CCSGG 2 cut(s) 235, 340
BcoDI GTCTC 7 cut(s) 132, 229, 292, 307, 477, 700, 932
BfaI CTAG 7 cut(s) 717, 768, 903, 1107, 1350, 1367, 1473
BfoI RGCGCY 1 cut(s) 896
BfuAI ACCTGC 1 cut(s) 1696
BglI GCCNNNNNGGC 3 cut(s) 176, 218, 526
BlpI GCTNAGC 1 cut(s) 1130
Bme1390I CCNGG 5 cut(s) 70, 235, 340, 446, 607
Bme18I GGWCC 2 cut(s) 231, 336
BmeRI GACNNNNNGTC 1 cut(s) 405
BmeT110I CYCGRG 3 cut(s) 129, 1056, 1176
BmgBI CACGTC 2 cut(s) 141, 899
BmgT120I GGNCC 3 cut(s) 231, 336, 839
BmiI GGNNCC 4 cut(s) 67, 655, 840, 1453
BmrFI CCNGG 5 cut(s) 70, 235, 340, 446, 607
BmsI GCATC 7 cut(s) 240, 803, 1124, 1282, 1522, 1548, 1580
BmtI GCTAGC 1 cut(s) 1476
BoxI GACNNNNGTC 2 cut(s) 469, 712
BpiI GAAGAC 3 cut(s) 150, 810, 1478
BplI GAGNNNNNCTC 6 cut(s) 422, 454, 1159, 1191, 1598, 1630
BpmI CTGGAG 1 cut(s) 428
Bpu10I CCTNAGC 1 cut(s) 269
Bpu1102I GCTNAGC 1 cut(s) 1130
Bpu14I TTCGAA 2 cut(s) 200, 1258
BpuEI CTTGAG 3 cut(s) 107, 211, 1237
BpuMI CCSGG 2 cut(s) 235, 340
BsaHI GRCGYC 2 cut(s) 257, 518
BsaI GGTCTC 3 cut(s) 229, 292, 307
BsaJI CCNNGG 3 cut(s) 174, 234, 1055
BsaWI WCCGGW 3 cut(s) 47, 301, 567
BsaXI ACNNNNNCTCC 2 cut(s) 58, 88
Bsc4I CCNNNNNNNGG 8 cut(s) 62, 101, 574, 837, 1097, 1158, 1159, 1160
Bse118I RCCGGY 8 cut(s) 217, 301, 353, 520, 567, 574, 1134, 1320
Bse1I ACTGG 2 cut(s) 1081, 1490
Bse3DI GCAATG 2 cut(s) 671, 1572
BseBI CCWGG 3 cut(s) 70, 446, 607
BseDI CCNNGG 3 cut(s) 174, 234, 1055
BseGI GGATG 4 cut(s) 794, 1148, 1537, 1630
BseLI CCNNNNNNNGG 8 cut(s) 62, 101, 574, 837, 1097, 1158, 1159, 1160
BseMI GCAATG 2 cut(s) 671, 1572
BseMII CTCAG 7 cut(s) 71, 260, 392, 701, 741, 1144, 1715
BseNI ACTGG 2 cut(s) 1081, 1490
BseRI GAGGAG 4 cut(s) 307, 310, 418, 1044
BseXI GCAGC 8 cut(s) 166, 337, 372, 865, 1090, 1234, 1348, 1709
BseYI CCCAGC 1 cut(s) 685
BsgI GTGCAG 1 cut(s) 1347
Bsh1236I CGCG 1 cut(s) 176
Bsh1285I CGRYCG 3 cut(s) 52, 278, 467
BshNI GGYRCC 2 cut(s) 65, 1451
BshTI ACCGGT 2 cut(s) 301, 567
BsiEI CGRYCG 3 cut(s) 52, 278, 467
BsiHKAI GWGCWC 1 cut(s) 852
BsiHKCI CYCGRG 3 cut(s) 129, 1056, 1176
BslFI GGGAC 1 cut(s) 127
BslI CCNNNNNNNGG 8 cut(s) 62, 101, 574, 837, 1097, 1158, 1159, 1160
BsmAI GTCTC 7 cut(s) 132, 229, 292, 307, 477, 700, 932
BsmBI CGTCTC 1 cut(s) 477
BsmFI GGGAC 1 cut(s) 127
BsmI GAATGC 1 cut(s) 1351
Bso31I GGTCTC 3 cut(s) 229, 292, 307
BsoBI CYCGRG 3 cut(s) 129, 1056, 1176
Bsp119I TTCGAA 2 cut(s) 200, 1258
Bsp1286I GDGCHC 2 cut(s) 852, 1172
Bsp143I GATC 6 cut(s) 532, 647, 694, 1379, 1423, 1678
Bsp1720I GCTNAGC 1 cut(s) 1130
BspCNI CTCAG 7 cut(s) 70, 261, 391, 702, 742, 1143, 1716
BspFNI CGCG 1 cut(s) 176
BspLI GGNNCC 4 cut(s) 67, 655, 840, 1453
BspMI ACCTGC 1 cut(s) 1696
BspOI GCTAGC 1 cut(s) 1476
BspPI GGATC 5 cut(s) 540, 655, 1374, 1431, 1686
BspT104I TTCGAA 2 cut(s) 200, 1258
BspT107I GGYRCC 2 cut(s) 65, 1451
BspTNI GGTCTC 3 cut(s) 229, 292, 307
BsrBI CCGCTC 1 cut(s) 502
BsrDI GCAATG 2 cut(s) 671, 1572
BsrFI RCCGGY 8 cut(s) 217, 301, 353, 520, 567, 574, 1134, 1320
BsrI ACTGG 2 cut(s) 1081, 1490
BssAI RCCGGY 8 cut(s) 217, 301, 353, 520, 567, 574, 1134, 1320
BssECI CCNNGG 3 cut(s) 174, 234, 1055
BssMI GATC 6 cut(s) 532, 647, 694, 1379, 1423, 1678
BssNI GRCGYC 2 cut(s) 257, 518
BssSI CACGAG 1 cut(s) 845
Bst2BI CACGAG 1 cut(s) 845
Bst2UI CCWGG 3 cut(s) 70, 446, 607
Bst4CI ACNGT 6 cut(s) 207, 625, 780, 963, 994, 1693
Bst6I CTCTTC 2 cut(s) 1255, 1401
BstACI GRCGYC 2 cut(s) 257, 518
BstAPI GCANNNNNTGC 2 cut(s) 870, 1660
BstBI TTCGAA 2 cut(s) 200, 1258
BstDEI CTNAG 7 cut(s) 57, 269, 378, 710, 750, 1130, 1724
BstDSI CCRYGG 1 cut(s) 174
BstF5I GGATG 4 cut(s) 794, 1148, 1537, 1630
BstFNI CGCG 1 cut(s) 176
BstH2I RGCGCY 1 cut(s) 896
BstHHI GCGC 3 cut(s) 212, 895, 957
BstKTI GATC 6 cut(s) 535, 650, 697, 1382, 1426, 1681
BstMAI GTCTC 7 cut(s) 132, 229, 292, 307, 477, 700, 932
BstMBI GATC 6 cut(s) 532, 647, 694, 1379, 1423, 1678
BstMCI CGRYCG 3 cut(s) 52, 278, 467
BstNI CCWGG 3 cut(s) 70, 446, 607
BstNSI RCATGY 4 cut(s) 154, 1228, 1301, 1658
BstPAI GACNNNNGTC 2 cut(s) 469, 712
BstSCI CCNGG 5 cut(s) 68, 233, 338, 444, 605
BstUI CGCG 1 cut(s) 176
BstV1I GCAGC 8 cut(s) 166, 337, 372, 865, 1090, 1234, 1348, 1709
BstV2I GAAGAC 3 cut(s) 150, 810, 1478
BstX2I RGATCY 3 cut(s) 647, 1379, 1678
BstXI CCANNNNNNTGG 1 cut(s) 613
BstYI RGATCY 3 cut(s) 647, 1379, 1678
BtgI CCRYGG 1 cut(s) 174
BtgZI GCGATG 1 cut(s) 1101
BtrI CACGTC 2 cut(s) 141, 899
BtsCI GGATG 4 cut(s) 794, 1148, 1537, 1630
BtsI GCAGTG 1 cut(s) 1337
BtsIMutI CAGTG 2 cut(s) 1337, 1497
BveI ACCTGC 1 cut(s) 1696
CaiI CAGNNNCTG 2 cut(s) 268, 385
CfoI GCGC 3 cut(s) 212, 895, 957
Cfr10I RCCGGY 8 cut(s) 217, 301, 353, 520, 567, 574, 1134, 1320
Cfr13I GGNCC 3 cut(s) 231, 336, 839
Cfr42I CCGCGG 1 cut(s) 177
CseI GACGC 4 cut(s) 171, 265, 274, 526
Csp6I GTAC 5 cut(s) 66, 436, 565, 621, 1754
CspAI ACCGGT 2 cut(s) 301, 567
CspCI CAANNNNNGTGG 2 cut(s) 975, 1010
CviAII CATG 5 cut(s) 151, 1225, 1298, 1655, 1702
CviQI GTAC 5 cut(s) 66, 436, 565, 621, 1754
DdeI CTNAG 7 cut(s) 57, 269, 378, 710, 750, 1130, 1724
DpnI GATC 6 cut(s) 534, 649, 696, 1381, 1425, 1680
DpnII GATC 6 cut(s) 532, 647, 694, 1379, 1423, 1678
DraIII CACNNNGTG 1 cut(s) 1525
DriI GACNNNNNGTC 1 cut(s) 405
EaeI YGGCCR 2 cut(s) 572, 1136
Eam1104I CTCTTC 2 cut(s) 1255, 1401
Eam1105I GACNNNNNGTC 1 cut(s) 405
EarI CTCTTC 2 cut(s) 1255, 1401
EciI GGCGGA 2 cut(s) 157, 1637
Ecl136II GAGCTC 1 cut(s) 850
Eco147I AGGCCT 2 cut(s) 73, 1111
Eco24I GRGCYC 2 cut(s) 852, 1172
Eco31I GGTCTC 3 cut(s) 229, 292, 307
Eco47I GGWCC 2 cut(s) 231, 336
Eco53kI GAGCTC 1 cut(s) 850
Eco57I CTGAAG 2 cut(s) 804, 1527
Eco88I CYCGRG 3 cut(s) 129, 1056, 1176
EcoICRI GAGCTC 1 cut(s) 850
EcoO109I RGGNCCY 1 cut(s) 839
EcoRI GAATTC 1 cut(s) 544
EcoRII CCWGG 3 cut(s) 68, 444, 605
EcoT38I GRGCYC 2 cut(s) 852, 1172
Esp3I CGTCTC 1 cut(s) 477
FaeI CATG 5 cut(s) 154, 1228, 1301, 1658, 1705
FaqI GGGAC 1 cut(s) 127
FatI CATG 5 cut(s) 150, 1224, 1297, 1654, 1701
FauI CCCGC 1 cut(s) 152
FblI GTMKAC 1 cut(s) 185
FokI GGATG 4 cut(s) 781, 1135, 1544, 1637
FriOI GRGCYC 2 cut(s) 852, 1172
FspBI CTAG 7 cut(s) 717, 768, 903, 1107, 1350, 1367, 1473
FspI TGCGCA 1 cut(s) 956
GlaI GCGC 3 cut(s) 211, 894, 956
GsaI CCCAGC 1 cut(s) 689
GsuI CTGGAG 1 cut(s) 428
HaeII RGCGCY 1 cut(s) 896
HgaI GACGC 4 cut(s) 171, 265, 274, 526
HhaI GCGC 3 cut(s) 212, 895, 957
Hin1I GRCGYC 2 cut(s) 257, 518
Hin1II CATG 5 cut(s) 154, 1228, 1301, 1658, 1705
Hin6I GCGC 3 cut(s) 210, 893, 955
HinP1I GCGC 3 cut(s) 210, 893, 955
HincII GTYRAC 2 cut(s) 1012, 1689
HindII GTYRAC 2 cut(s) 1012, 1689
HindIII AAGCTT 1 cut(s) 1461
HinfI GANTC 5 cut(s) 244, 406, 431, 771, 1279
HpaI GTTAAC 1 cut(s) 1012
HphI GGTGA 4 cut(s) 374, 460, 1315, 1621
Hpy166II GTNNAC 7 cut(s) 186, 1012, 1415, 1519, 1612, 1689, 1754
Hpy188III TCNNGA 6 cut(s) 129, 131, 698, 845, 1176, 1427
Hpy8I GTNNAC 7 cut(s) 186, 1012, 1415, 1519, 1612, 1689, 1754
Hpy99I CGWCG 4 cut(s) 22, 259, 403, 520
HpyAV CCTTC 9 cut(s) 55, 502, 1000, 1182, 1239, 1261, 1522, 1591, 1767
HpyCH4III ACNGT 6 cut(s) 207, 625, 780, 963, 994, 1693
HpyCH4IV ACGT 3 cut(s) 140, 898, 1750
HpyF3I CTNAG 7 cut(s) 57, 269, 378, 710, 750, 1130, 1724
HpySE526I ACGT 3 cut(s) 140, 898, 1750
Hsp92I GRCGYC 2 cut(s) 257, 518
Hsp92II CATG 5 cut(s) 154, 1228, 1301, 1658, 1705
HspAI GCGC 3 cut(s) 210, 893, 955
KpnI GGTACC 1 cut(s) 69
KroI GCCGGC 5 cut(s) 217, 353, 520, 574, 1134
KroNI GCCGGC 5 cut(s) 219, 355, 522, 576, 1136
KspAI GTTAAC 1 cut(s) 1012
KspI CCGCGG 1 cut(s) 177
Kzo9I GATC 6 cut(s) 532, 647, 694, 1379, 1423, 1678
LmnI GCTCC 8 cut(s) 347, 447, 499, 559, 609, 1100, 1502, 1651
Lsp1109I GCAGC 8 cut(s) 166, 337, 372, 865, 1090, 1234, 1348, 1709
LweI GCATC 7 cut(s) 240, 803, 1124, 1282, 1522, 1548, 1580
MaeI CTAG 7 cut(s) 717, 768, 903, 1107, 1350, 1367, 1473
MaeII ACGT 3 cut(s) 140, 898, 1750
MaeIII GTNAC 5 cut(s) 136, 304, 391, 772, 1211
MalI GATC 6 cut(s) 534, 649, 696, 1381, 1425, 1680
MbiI CCGCTC 1 cut(s) 502
MboI GATC 6 cut(s) 532, 647, 694, 1379, 1423, 1678
MboII GAAGA 8 cut(s) 150, 153, 646, 810, 1272, 1418, 1478, 1533
MflI RGATCY 3 cut(s) 647, 1379, 1678
MhlI GDGCHC 2 cut(s) 852, 1172
MluCI AATT 8 cut(s) 196, 319, 544, 679, 727, 832, 868, 1438
MlyI GAGTC 4 cut(s) 253, 415, 440, 780
MmeI TCCRAC 3 cut(s) 114, 500, 865
MreI CGCCGGCG 2 cut(s) 217, 520
MroNI GCCGGC 5 cut(s) 217, 353, 520, 574, 1134
MseI TTAA 2 cut(s) 1011, 1238
MslI CAYNNNNRTG 1 cut(s) 599
MspA1I CMGCKG 1 cut(s) 176
MspR9I CCNGG 5 cut(s) 70, 235, 340, 446, 607
Mva1269I GAATGC 1 cut(s) 1351
MvaI CCWGG 3 cut(s) 70, 446, 607
MvnI CGCG 1 cut(s) 176
NaeI GCCGGC 5 cut(s) 219, 355, 522, 576, 1136
NciI CCSGG 2 cut(s) 235, 340
NdeII GATC 6 cut(s) 532, 647, 694, 1379, 1423, 1678
NgoMIV GCCGGC 5 cut(s) 217, 353, 520, 574, 1134
NheI GCTAGC 1 cut(s) 1472
NlaIII CATG 5 cut(s) 154, 1228, 1301, 1658, 1705
NlaIV GGNNCC 4 cut(s) 67, 655, 840, 1453
NmuCI GTSAC 4 cut(s) 136, 304, 391, 772
NsbI TGCGCA 1 cut(s) 956
NspI RCATGY 4 cut(s) 154, 1228, 1301, 1658
NspV TTCGAA 2 cut(s) 200, 1258
PaeI GCATGC 1 cut(s) 1658
PaeR7I CTCGAG 2 cut(s) 129, 1176
PceI AGGCCT 2 cut(s) 73, 1111
PciI ACATGT 2 cut(s) 150, 1297
PcsI WCGNNNNNNNCGW 1 cut(s) 521
PctI GAATGC 1 cut(s) 1351
PdiI GCCGGC 5 cut(s) 219, 355, 522, 576, 1136
PfeI GAWTC 1 cut(s) 1279
PflMI CCANNNNNTGG 1 cut(s) 1097
PinAI ACCGGT 2 cut(s) 301, 567
PleI GAGTC 4 cut(s) 252, 414, 439, 779
PpsI GAGTC 4 cut(s) 252, 414, 439, 779
PscI ACATGT 2 cut(s) 150, 1297
PshAI GACNNNNGTC 2 cut(s) 469, 712
Psp124BI GAGCTC 1 cut(s) 852
Psp6I CCWGG 3 cut(s) 68, 444, 605
PspFI CCCAGC 1 cut(s) 685
PspGI CCWGG 3 cut(s) 68, 444, 605
PspN4I GGNNCC 4 cut(s) 67, 655, 840, 1453
PspPI GGNCC 3 cut(s) 231, 336, 839
PstNI CAGNNNCTG 2 cut(s) 268, 385
PsuI RGATCY 3 cut(s) 647, 1379, 1678
RsaI GTAC 5 cut(s) 67, 437, 566, 622, 1755
RsaNI GTAC 5 cut(s) 66, 436, 565, 621, 1754
RseI CAYNNNNRTG 1 cut(s) 599
SacI GAGCTC 1 cut(s) 852
SacII CCGCGG 1 cut(s) 177
SaqAI TTAA 2 cut(s) 1011, 1238
Sau3AI GATC 6 cut(s) 532, 647, 694, 1379, 1423, 1678
Sau96I GGNCC 3 cut(s) 231, 336, 839
SchI GAGTC 4 cut(s) 253, 415, 440, 780
ScrFI CCNGG 5 cut(s) 70, 235, 340, 446, 607
SduI GDGCHC 2 cut(s) 852, 1172
SfaNI GCATC 7 cut(s) 240, 803, 1124, 1282, 1522, 1548, 1580
Sfr274I CTCGAG 2 cut(s) 129, 1176
Sfr303I CCGCGG 1 cut(s) 177
SfuI TTCGAA 2 cut(s) 200, 1258
SgrAI CRCCGGYG 2 cut(s) 217, 520
SgrBI CCGCGG 1 cut(s) 177
SinI GGWCC 2 cut(s) 231, 336
SlaI CTCGAG 2 cut(s) 129, 1176
SmiMI CAYNNNNRTG 1 cut(s) 599
SmlI CTYRAG 5 cut(s) 122, 129, 226, 1176, 1216
SmoI CTYRAG 5 cut(s) 122, 129, 226, 1176, 1216
SphI GCATGC 1 cut(s) 1658
Sse9I AATT 8 cut(s) 196, 319, 544, 679, 727, 832, 868, 1438
SseBI AGGCCT 2 cut(s) 73, 1111
SspMI CTAG 7 cut(s) 717, 768, 903, 1107, 1350, 1367, 1473
SstI GAGCTC 1 cut(s) 852
StuI AGGCCT 2 cut(s) 73, 1111
StyD4I CCNGG 5 cut(s) 68, 233, 338, 444, 605
TaaI ACNGT 6 cut(s) 207, 625, 780, 963, 994, 1693
TaiI ACGT 3 cut(s) 143, 901, 1753
TasI AATT 8 cut(s) 196, 319, 544, 679, 727, 832, 868, 1438
TauI GCSGC 9 cut(s) 41, 44, 120, 179, 242, 262, 360, 377, 1373
TfiI GAWTC 1 cut(s) 1279
Tru1I TTAA 2 cut(s) 1011, 1238
Tru9I TTAA 2 cut(s) 1011, 1238
TscAI CASTG 2 cut(s) 1337, 1497
TseFI GTSAC 4 cut(s) 136, 304, 391, 772
TseI GCWGC 9 cut(s) 8, 179, 350, 385, 878, 1103, 1247, 1361, 1697
Tsp45I GTSAC 4 cut(s) 136, 304, 391, 772
TspDTI ATGAA 2 cut(s) 777, 1641
TspGWI ACGGA 1 cut(s) 1472
TspRI CASTG 2 cut(s) 1337, 1497
Van91I CCANNNNNTGG 1 cut(s) 1097
VpaK11BI GGWCC 2 cut(s) 231, 336
XapI RAATTY 2 cut(s) 544, 679
XceI RCATGY 4 cut(s) 154, 1228, 1301, 1658
XhoI CTCGAG 2 cut(s) 129, 1176
XmiI GTMKAC 1 cut(s) 185
XspI CTAG 7 cut(s) 717, 768, 903, 1107, 1350, 1367, 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.