Rh7BG236700

QWRF motif-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001505
Physical Location & Seq
Forward (+)
20814129 .. 20820724
6596 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG236700.1

Sequence Viewer

Length: 318 bp
ATGGCAAATCTCAGGCAACAGTCCTCACCTTCCGAGGGCGAGTCGTACTCGCTCCAGGTGAGTAAAGCGAAGCGAGCGCCGTCTCAGACTGCGAGGAAAGGCACTCCAGAGTGGGGGAAGACTTCGACACCGGCGACGCCGGATCAGAGCGAGAATTCTAGGCCGATAGAGCAGTACCGGTGGTCGGAGAGTTCTCTGTTCTCCGATCTTCGACGACTCACCCGTCTTCAGATCTTGGTCTCCTCTTCCAAGAGTTTAGACAGCAACTCCGTAGACAACATCGCTGCTAGAAGTCATCGCCGAAGCCTCGGAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
QWRF

Protein Analysis

105

Amino Acids

11.68

Weight (kDa)

10.33

Isoelectric Point (pI)

98.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 222
AccI GTMKAC 1 cut(s) 273
AclWI GGATC 1 cut(s) 150
AcsI RAATTY 1 cut(s) 154
AcuI CTGAAG 1 cut(s) 212
AcyI GRCGYC 1 cut(s) 137
AfaI GTAC 2 cut(s) 47, 176
AfiI CCNNNNNNNGG 3 cut(s) 35, 113, 184
AgeI ACCGGT 1 cut(s) 177
AjnI CCWGG 1 cut(s) 54
Alw26I GTCTC 2 cut(s) 87, 244
AlwI GGATC 1 cut(s) 150
AoxI GGCC 1 cut(s) 161
ApeKI GCWGC 1 cut(s) 284
ApoI RAATTY 1 cut(s) 154
AsiGI ACCGGT 1 cut(s) 177
AspLEI GCGC 1 cut(s) 79
AsuHPI GGTGA 3 cut(s) 18, 70, 211
BbsI GAAGAC 2 cut(s) 125, 218
BbvI GCAGC 1 cut(s) 271
BceAI ACGGC 1 cut(s) 64
BciT130I CCWGG 1 cut(s) 56
BcoDI GTCTC 2 cut(s) 87, 244
BfaI CTAG 2 cut(s) 159, 288
BfoI RGCGCY 1 cut(s) 80
BglII AGATCT 1 cut(s) 231
BisI GCNGC 1 cut(s) 285
BlsI GCNGC 1 cut(s) 286
Bme1390I CCNGG 1 cut(s) 56
BmrFI CCNGG 1 cut(s) 56
BpiI GAAGAC 2 cut(s) 125, 218
BplI GAGNNNNNCTC 2 cut(s) 32, 64
BpmI CTGGAG 2 cut(s) 38, 90
BsaHI GRCGYC 1 cut(s) 137
BsaI GGTCTC 1 cut(s) 244
BsaJI CCNNGG 2 cut(s) 33, 307
BsaWI WCCGGW 1 cut(s) 177
BsaXI ACNNNNNCTCC 2 cut(s) 251, 281
Bsc4I CCNNNNNNNGG 3 cut(s) 35, 113, 184
Bse118I RCCGGY 2 cut(s) 130, 177
BseBI CCWGG 1 cut(s) 56
BseDI CCNNGG 2 cut(s) 33, 307
BseLI CCNNNNNNNGG 3 cut(s) 35, 113, 184
BseMII CTCAG 2 cut(s) 25, 98
BseRI GAGGAG 1 cut(s) 232
BseXI GCAGC 1 cut(s) 271
BshFI GGCC 1 cut(s) 163
BshTI ACCGGT 1 cut(s) 177
BsiSI CCGG 3 cut(s) 131, 140, 178
BslI CCNNNNNNNGG 3 cut(s) 35, 113, 184
BsmAI GTCTC 2 cut(s) 87, 244
BsmBI CGTCTC 1 cut(s) 87
BsnI GGCC 1 cut(s) 163
Bso31I GGTCTC 1 cut(s) 244
Bsp143I GATC 3 cut(s) 142, 205, 231
BspANI GGCC 1 cut(s) 163
BspCNI CTCAG 2 cut(s) 24, 97
BspPI GGATC 1 cut(s) 150
BspTNI GGTCTC 1 cut(s) 244
BsrFI RCCGGY 2 cut(s) 130, 177
BssAI RCCGGY 2 cut(s) 130, 177
BssECI CCNNGG 2 cut(s) 33, 307
BssMI GATC 3 cut(s) 142, 205, 231
BssNI GRCGYC 1 cut(s) 137
Bst2UI CCWGG 1 cut(s) 56
Bst4CI ACNGT 1 cut(s) 21
Bst6I CTCTTC 1 cut(s) 250
BstACI GRCGYC 1 cut(s) 137
BstC8I GCNNGC 1 cut(s) 75
BstDEI CTNAG 2 cut(s) 11, 84
BstH2I RGCGCY 1 cut(s) 80
BstHHI GCGC 1 cut(s) 79
BstKTI GATC 3 cut(s) 145, 208, 234
BstMAI GTCTC 2 cut(s) 87, 244
BstMBI GATC 3 cut(s) 142, 205, 231
BstMWI GCNNNNNNNGC 2 cut(s) 74, 169
BstNI CCWGG 1 cut(s) 56
BstSCI CCNGG 1 cut(s) 54
BstV1I GCAGC 1 cut(s) 271
BstV2I GAAGAC 2 cut(s) 125, 218
BstX2I RGATCY 1 cut(s) 231
BstYI RGATCY 1 cut(s) 231
BsuRI GGCC 1 cut(s) 163
BtgZI GCGATG 2 cut(s) 265, 281
Cac8I GCNNGC 1 cut(s) 75
CfoI GCGC 1 cut(s) 79
Cfr10I RCCGGY 2 cut(s) 130, 177
CseI GACGC 1 cut(s) 145
Csp6I GTAC 2 cut(s) 46, 175
CspAI ACCGGT 1 cut(s) 177
CviJI RGCY 2 cut(s) 163, 306
CviKI_1 RGCY 2 cut(s) 163, 306
CviQI GTAC 2 cut(s) 46, 175
DdeI CTNAG 2 cut(s) 11, 84
DpnI GATC 3 cut(s) 144, 207, 233
DpnII GATC 3 cut(s) 142, 205, 231
DrdI GACNNNNNNGTC 1 cut(s) 222
DseDI GACNNNNNNGTC 1 cut(s) 222
Eam1104I CTCTTC 1 cut(s) 250
EarI CTCTTC 1 cut(s) 250
Eco31I GGTCTC 1 cut(s) 244
Eco57I CTGAAG 1 cut(s) 212
EcoRI GAATTC 1 cut(s) 154
EcoRII CCWGG 1 cut(s) 54
Esp3I CGTCTC 1 cut(s) 87
FblI GTMKAC 1 cut(s) 273
Fnu4HI GCNGC 1 cut(s) 285
Fsp4HI GCNGC 1 cut(s) 285
FspBI CTAG 2 cut(s) 159, 288
GlaI GCGC 1 cut(s) 78
GluI GCNGC 1 cut(s) 285
GsuI CTGGAG 2 cut(s) 38, 90
HaeII RGCGCY 1 cut(s) 80
HaeIII GGCC 1 cut(s) 163
HapII CCGG 3 cut(s) 131, 140, 178
HgaI GACGC 1 cut(s) 145
HhaI GCGC 1 cut(s) 79
Hin1I GRCGYC 1 cut(s) 137
Hin6I GCGC 1 cut(s) 77
HinP1I GCGC 1 cut(s) 77
HinfI GANTC 3 cut(s) 41, 216, 312
HpaII CCGG 3 cut(s) 131, 140, 178
HphI GGTGA 3 cut(s) 18, 70, 211
Hpy166II GTNNAC 1 cut(s) 274
Hpy188I TCNGA 8 cut(s) 34, 87, 147, 187, 205, 231, 311, 317
Hpy188III TCNNGA 1 cut(s) 107
Hpy8I GTNNAC 1 cut(s) 274
Hpy99I CGWCG 2 cut(s) 139, 216
HpyAV CCTTC 1 cut(s) 39
HpyCH4III ACNGT 1 cut(s) 21
HpyF10VI GCNNNNNNNGC 2 cut(s) 74, 169
HpyF3I CTNAG 2 cut(s) 11, 84
Hsp92I GRCGYC 1 cut(s) 137
HspAI GCGC 1 cut(s) 77
Kzo9I GATC 3 cut(s) 142, 205, 231
LmnI GCTCC 1 cut(s) 57
LpnPI CCDG 6 cut(s) 41, 68, 120, 144, 153, 191
Lsp1109I GCAGC 1 cut(s) 271
MaeI CTAG 2 cut(s) 159, 288
MalI GATC 3 cut(s) 144, 207, 233
MboI GATC 3 cut(s) 142, 205, 231
MboII GAAGA 4 cut(s) 130, 200, 218, 237
MflI RGATCY 1 cut(s) 231
MluCI AATT 1 cut(s) 154
MlyI GAGTC 2 cut(s) 50, 210
MmeI TCCRAC 1 cut(s) 165
MnlI CCTC 5 cut(s) 28, 34, 87, 253, 317
MspI CCGG 3 cut(s) 131, 140, 178
MspR9I CCNGG 1 cut(s) 56
MvaI CCWGG 1 cut(s) 56
MwoI GCNNNNNNNGC 2 cut(s) 74, 169
NdeII GATC 3 cut(s) 142, 205, 231
PcsI WCGNNNNNNNCGW 2 cut(s) 131, 220
PfeI GAWTC 1 cut(s) 312
PinAI ACCGGT 1 cut(s) 177
PkrI GCNGC 1 cut(s) 286
PleI GAGTC 2 cut(s) 49, 210
PpsI GAGTC 2 cut(s) 49, 210
Psp6I CCWGG 1 cut(s) 54
PspGI CCWGG 1 cut(s) 54
PsuI RGATCY 1 cut(s) 231
RsaI GTAC 2 cut(s) 47, 176
RsaNI GTAC 2 cut(s) 46, 175
SatI GCNGC 1 cut(s) 285
Sau3AI GATC 3 cut(s) 142, 205, 231
SchI GAGTC 2 cut(s) 50, 210
ScrFI CCNGG 1 cut(s) 56
SetI ASST 2 cut(s) 31, 60
SgrAI CRCCGGYG 1 cut(s) 130
Sse9I AATT 1 cut(s) 154
SspMI CTAG 2 cut(s) 159, 288
StyD4I CCNGG 1 cut(s) 54
TaaI ACNGT 1 cut(s) 21
TaqI TCGA 2 cut(s) 125, 211
TasI AATT 1 cut(s) 154
TfiI GAWTC 1 cut(s) 312
TseI GCWGC 1 cut(s) 284
TspGWI ACGGA 1 cut(s) 259
XapI RAATTY 1 cut(s) 154
XmiI GTMKAC 1 cut(s) 273
XspI CTAG 2 cut(s) 159, 288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.