Rroxscaffold_7G00171160

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000931
Physical Location & Seq
Forward (+)
11499445 .. 11504120
4676 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00171160.1

Sequence Viewer

Length: 1998 bp
ATGGGGACCTTTTCTGTGAGAAAGAGGGTCAGGCTTGCTGAGGAATATTCACATTTTGAGGATGAATTGTTGTTGGATAAGAATTATGAGAAGTTCTTGGGGTTAGTTCAGGTTGGTGATGAAAATTTGGACAATTTTTCTGTGGATCAAGCTAGGTCTTTGCATTATGTGGATCCTCGGTGTGTGATTTCGGATCAGATTAGGTACCACCAAGAGGTTGAGCTACTAGATGATCCCAATTTAGATGTTTCAGAAACTTCGAAAAAATCTCAGGTGATTGAGAAGAATTTGAGGAAGGGTATGATTAGGGGAGAGATGAATGGCCTTGAGAAATCTGCTGTTCTTCTGAGCACAGAAGTTAATGAGGGCCCAAGTAATGTTAGGTATGCTCTGAAGAAAAACAGGGCCACTGTGGAAAAAGAGGATCTCCTAGTGAAGAAGAGTAACGTTGTGATGGAGAATGTAAAATTGGAACCTCTAGATTTTGATTCTGGTGGGATGAATCAGTGTTCCAATAAAAGAACTCACTTAGAAGCTTTTAACACTCAAAAACCTTTGAAAAGTGCAGTGGAGAATGTAACAGTGGAAGCTCCGGATTCTGATTCTGGTTGGAACCGTGGGATAAGTGAGCGTTGCAGTAAAAGACGTTGTTTAGAGGCTTCTGACACTCCAAAGACGCTGAAAAGTTCTCGGGTGAAGAAGAAAAACGAAATTAACAGAACTTCAAGGAGATTTTTGAAGAAAGAAAAGATGAAGATAAATATTCCTAACAAGTCTGCTCGTCTTTTGCCTAAAAAAAGGACTGGGATGAAGAAGAAGGTTAATGTGGAAGCTGCACATGCTGTTTCTGGTAGGTCAAATGTGCTCTCTAGCAAACAAAAAGGTTCCCGGATCCTACAATCTGCTCCGCGTAGGTGTAACCGTGGAGCTTTATCTATTCATATTGATGAGACCTATGAAACATTTCTCAACCTTGCTGTGATGTCTGGTGACATAATGATATATACACCCAGAAATGGTACAAGAAATATTTATGAGGAGGATATGCAGAGTTCATCAGATTCAGAAGAAACTGTACTAGACAACAATCGACGTGATGGATATCATCCCTCATATGTGAAAACCAAGGCTGCAACTAACCGAACTTTGAGGAGGGGTGTGATGAAGAAAAAGATGAGCTGCCCTAAGACCTACGAAGATACTTCCTCAGATTCGGATCTAAATGAACAGGACAGTCATCAACATGATGGATGTCGTGCCTCATTTGTGAAAAATAATACTGCAATTAATAGAACTATGAGAAAAACTGTGAGCCCAAGAGCTCGTAGGAGTGCTTTGCAGAATAAAAACAGGAAGACTCCCACCGGAAATTTAGAGGTCCTCCGAGCAAAAAAGAGTTCAGTGGCAAAGAAGAAGAATATAAAAGAAACTCTGAATACTGTTAGTGCTGAATGTGATTTAGTACATGAGAGTTATGAAGAATTCATAAGTTTCGTTGAGGTGGATGGTAAAAACTTGGTGTATACACCAAGCAATGGTGGACGAAAGATATATGAGGAGCAGGAGGCTACATCAGATGCAATGCACAGGGATTCACTTGATAGTTTTCATATAATGGACACAAACGGTGGGCACAGCATTGAGAGTCATAACCAGTTTAGGGAGGGGCTTATGAAGGATCTTGGAAGGCCGTACGACCAAGAAGAGCATCTCAAGCTCTTGGCAGATGCATGTAGCAAAGGGCCAAGTGACCATGAGACAGATCTGTTTAATAGCATTGAATCAGGTCAAACGCCAAGAGAATATGGAAAAACATACCTAGAGGTGTACAAAGATCTGGGTGAAAAGATTTATGCGGCTAACGGCGATCGCTCTAAAGCTTTAAATCTCTTCCGGGGATTGTTCTACTGGCTGAAAAACAAGTCCCAGGAAGGAAGCTTCATTCCATGGAAGGACAAAAGATGTTTGAAGATGATGCTGCCGCCTGAGAAAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

665

Amino Acids

75.78

Weight (kDa)

9.23

Isoelectric Point (pI)

47.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 204
AccB1I GGYRCC 1 cut(s) 204
AccB7I CCANNNNNTGG 1 cut(s) 1535
AccI GTMKAC 1 cut(s) 1523
AccII CGCG 1 cut(s) 910
AccIII TCCGGA 1 cut(s) 592
AciI CCGC 3 cut(s) 908, 1856, 1982
AclI AACGTT 1 cut(s) 447
AcsI RAATTY 4 cut(s) 124, 286, 1369, 1481
AcuI CTGAAG 1 cut(s) 413
AfaI GTAC 6 cut(s) 206, 1021, 1077, 1464, 1694, 1829
AfiI CCNNNNNNNGG 4 cut(s) 214, 1016, 1535, 1660
AgsI TTSAA 5 cut(s) 559, 726, 739, 1781, 1969
AjiI CACGTC 1 cut(s) 1094
AjnI CCWGG 1 cut(s) 1926
AjuI GAANNNNNNNTTGG 2 cut(s) 452, 484
Alw21I GWGCWC 3 cut(s) 353, 867, 1324
Alw26I GTCTC 2 cut(s) 944, 1751
Ama87I CYCGRG 1 cut(s) 690
Aor13HI TCCGGA 1 cut(s) 592
AoxI GGCC 5 cut(s) 322, 367, 405, 1688, 1742
ApaI GGGCCC 1 cut(s) 371
ApeKI GCWGC 4 cut(s) 833, 1130, 1179, 1978
ApoI RAATTY 4 cut(s) 124, 286, 1369, 1481
AseI ATTAAT 1 cut(s) 1287
AsiSI GCGATCGC 1 cut(s) 1870
Asp700I GAANNNNTTC 1 cut(s) 963
Asp718I GGTACC 1 cut(s) 204
AspS9I GGNCC 6 cut(s) 6, 367, 368, 405, 1378, 1742
AsuC2I CCSGG 2 cut(s) 889, 1895
AsuHPI GGTGA 5 cut(s) 128, 286, 706, 1001, 1853
AsuII TTCGAA 1 cut(s) 260
AvaI CYCGRG 1 cut(s) 690
AvaII GGWCC 2 cut(s) 6, 1378
BaeGI GKGCMC 2 cut(s) 371, 1635
BamHI GGATCC 2 cut(s) 172, 891
BanI GGYRCC 1 cut(s) 204
BanII GRGCYC 3 cut(s) 371, 1316, 1324
BarI GAAGNNNNNNTAC 2 cut(s) 1059, 1091
BbsI GAAGAC 1 cut(s) 1361
Bbv12I GWGCWC 3 cut(s) 353, 867, 1324
BbvCI CCTCAGC 1 cut(s) 39
BbvI GCAGC 4 cut(s) 820, 1117, 1166, 1965
BccI CCATC 4 cut(s) 448, 1091, 1241, 1499
BceAI ACGGC 2 cut(s) 1675, 1879
BciT130I CCWGG 1 cut(s) 1928
BcnI CCSGG 2 cut(s) 889, 1895
BcoDI GTCTC 2 cut(s) 944, 1751
BfaI CTAG 7 cut(s) 153, 227, 431, 479, 870, 1079, 1820
BglII AGATCT 2 cut(s) 1762, 1834
BisI GCNGC 6 cut(s) 834, 1131, 1180, 1857, 1979, 1982
BlsI GCNGC 6 cut(s) 835, 1132, 1181, 1858, 1980, 1983
Bme1390I CCNGG 3 cut(s) 889, 1895, 1928
Bme18I GGWCC 2 cut(s) 6, 1378
BmeT110I CYCGRG 1 cut(s) 690
BmgBI CACGTC 1 cut(s) 1094
BmgT120I GGNCC 6 cut(s) 6, 367, 368, 405, 1378, 1742
BmiI GGNNCC 8 cut(s) 7, 174, 206, 369, 474, 614, 886, 893
BmrFI CCNGG 3 cut(s) 889, 1895, 1928
BmrI ACTGGG 1 cut(s) 813
BmsI GCATC 4 cut(s) 1567, 1717, 1717, 1965
BmuI ACTGGG 1 cut(s) 813
BpiI GAAGAC 1 cut(s) 1361
Bpu10I CCTNAGC 1 cut(s) 39
Bpu14I TTCGAA 1 cut(s) 260
BpuEI CTTGAG 2 cut(s) 347, 1697
BpuMI CCSGG 2 cut(s) 889, 1895
BsaBI GATNNNNATC 2 cut(s) 1101, 1215
BsaI GGTCTC 1 cut(s) 944
BsaJI CCNNGG 7 cut(s) 176, 616, 922, 1125, 1894, 1926, 1946
BsaWI WCCGGW 2 cut(s) 592, 1364
Bsc4I CCNNNNNNNGG 4 cut(s) 214, 1016, 1535, 1660
Bse1I ACTGG 3 cut(s) 808, 1654, 1913
Bse3DI GCAATG 2 cut(s) 1540, 1587
Bse8I GATNNNNATC 2 cut(s) 1101, 1215
BseAI TCCGGA 1 cut(s) 592
BseBI CCWGG 1 cut(s) 1928
BseDI CCNNGG 7 cut(s) 176, 616, 922, 1125, 1894, 1926, 1946
BseGI GGATG 6 cut(s) 67, 504, 813, 1105, 1256, 1510
BseJI GATNNNNATC 2 cut(s) 1101, 1215
BseLI CCNNNNNNNGG 4 cut(s) 214, 1016, 1535, 1660
BseMI GCAATG 2 cut(s) 1540, 1587
BseMII CTCAG 5 cut(s) 30, 284, 338, 1221, 1977
BseNI ACTGG 3 cut(s) 808, 1654, 1913
BseRI GAGGAG 3 cut(s) 1052, 1165, 1571
BseSI GKGCMC 2 cut(s) 371, 1635
BseXI GCAGC 4 cut(s) 820, 1117, 1166, 1965
BsgI GTGCAG 2 cut(s) 585, 819
Bsh1236I CGCG 1 cut(s) 910
Bsh1285I CGRYCG 1 cut(s) 1870
BshFI GGCC 5 cut(s) 324, 369, 407, 1690, 1744
BshNI GGYRCC 1 cut(s) 204
BsiEI CGRYCG 1 cut(s) 1870
BsiHKAI GWGCWC 3 cut(s) 353, 867, 1324
BsiHKCI CYCGRG 1 cut(s) 690
BsiSI CCGG 4 cut(s) 593, 889, 1365, 1894
BsiWI CGTACG 1 cut(s) 1692
BslFI GGGAC 2 cut(s) 19, 1909
BslI CCNNNNNNNGG 4 cut(s) 214, 1016, 1535, 1660
BsmAI GTCTC 2 cut(s) 944, 1751
BsmFI GGGAC 2 cut(s) 19, 1909
BsnI GGCC 5 cut(s) 324, 369, 407, 1690, 1744
Bso31I GGTCTC 1 cut(s) 944
BsoBI CYCGRG 1 cut(s) 690
Bsp119I TTCGAA 1 cut(s) 260
Bsp120I GGGCCC 1 cut(s) 367
Bsp1286I GDGCHC 6 cut(s) 353, 371, 867, 1316, 1324, 1635
Bsp13I TCCGGA 1 cut(s) 592
Bsp1407I TGTACA 1 cut(s) 1827
Bsp19I CCATGG 1 cut(s) 1946
BspACI CCGC 3 cut(s) 908, 1856, 1982
BspANI GGCC 5 cut(s) 324, 369, 407, 1690, 1744
BspCNI CTCAG 5 cut(s) 31, 283, 339, 1220, 1978
BspEI TCCGGA 1 cut(s) 592
BspFNI CGCG 1 cut(s) 910
BspLI GGNNCC 8 cut(s) 7, 174, 206, 369, 474, 614, 886, 893
BspQI GCTCTTC 1 cut(s) 1698
BspT104I TTCGAA 1 cut(s) 260
BspT107I GGYRCC 1 cut(s) 204
BspTNI GGTCTC 1 cut(s) 944
BsrDI GCAATG 2 cut(s) 1540, 1587
BsrGI TGTACA 1 cut(s) 1827
BsrI ACTGG 3 cut(s) 808, 1654, 1913
BssECI CCNNGG 7 cut(s) 176, 616, 922, 1125, 1894, 1926, 1946
BssNAI GTATAC 1 cut(s) 1524
BssT1I CCWWGG 2 cut(s) 1125, 1946
Bst1107I GTATAC 1 cut(s) 1524
Bst2UI CCWGG 1 cut(s) 1928
Bst4CI ACNGT 9 cut(s) 412, 583, 617, 923, 1075, 1235, 1309, 1441, 1628
Bst6I CTCTTC 3 cut(s) 434, 1698, 1895
BstAUI TGTACA 1 cut(s) 1827
BstBI TTCGAA 1 cut(s) 260
BstC8I GCNNGC 1 cut(s) 36
BstDEI CTNAG 7 cut(s) 39, 270, 347, 529, 1185, 1207, 1986
BstDSI CCRYGG 3 cut(s) 616, 922, 1946
BstF5I GGATG 6 cut(s) 67, 504, 813, 1105, 1256, 1510
BstFNI CGCG 1 cut(s) 910
BstMAI GTCTC 2 cut(s) 944, 1751
BstMCI CGRYCG 1 cut(s) 1870
BstMWI GCNNNNNNNGC 2 cut(s) 839, 1714
BstNI CCWGG 1 cut(s) 1928
BstNSI RCATGY 2 cut(s) 842, 1734
BstSCI CCNGG 3 cut(s) 887, 1893, 1926
BstSLI GKGCMC 2 cut(s) 371, 1635
BstUI CGCG 1 cut(s) 910
BstV1I GCAGC 4 cut(s) 820, 1117, 1166, 1965
BstV2I GAAGAC 1 cut(s) 1361
BstX2I RGATCY 7 cut(s) 172, 424, 891, 1216, 1678, 1762, 1834
BstYI RGATCY 7 cut(s) 172, 424, 891, 1216, 1678, 1762, 1834
BstZ17I GTATAC 1 cut(s) 1524
BsuRI GGCC 5 cut(s) 324, 369, 407, 1690, 1744
BtgI CCRYGG 3 cut(s) 616, 922, 1946
BtrI CACGTC 1 cut(s) 1094
BtsCI GGATG 6 cut(s) 67, 504, 813, 1105, 1256, 1510
BtsI GCAGTG 1 cut(s) 573
BtsIMutI CAGTG 5 cut(s) 408, 512, 573, 588, 1407
Cac8I GCNNGC 1 cut(s) 36
Cfr13I GGNCC 6 cut(s) 6, 367, 368, 405, 1378, 1742
CseI GACGC 1 cut(s) 685
Csp6I GTAC 6 cut(s) 205, 1020, 1076, 1463, 1693, 1828
CviAII CATG 6 cut(s) 839, 1244, 1466, 1731, 1754, 1947
CviQI GTAC 6 cut(s) 205, 1020, 1076, 1463, 1693, 1828
DdeI CTNAG 7 cut(s) 39, 270, 347, 529, 1185, 1207, 1986
DraI TTTAAA 1 cut(s) 1884
Eam1104I CTCTTC 3 cut(s) 434, 1698, 1895
EarI CTCTTC 3 cut(s) 434, 1698, 1895
Ecl136II GAGCTC 1 cut(s) 1322
Eco130I CCWWGG 2 cut(s) 1125, 1946
Eco24I GRGCYC 3 cut(s) 371, 1316, 1324
Eco31I GGTCTC 1 cut(s) 944
Eco32I GATATC 1 cut(s) 1103
Eco47I GGWCC 2 cut(s) 6, 1378
Eco53kI GAGCTC 1 cut(s) 1322
Eco57I CTGAAG 1 cut(s) 413
Eco88I CYCGRG 1 cut(s) 690
EcoICRI GAGCTC 1 cut(s) 1322
EcoO109I RGGNCCY 3 cut(s) 6, 367, 1378
EcoRI GAATTC 1 cut(s) 1481
EcoRII CCWGG 1 cut(s) 1926
EcoRV GATATC 1 cut(s) 1103
EcoT14I CCWWGG 2 cut(s) 1125, 1946
EcoT22I ATGCAT 1 cut(s) 1732
EcoT38I GRGCYC 3 cut(s) 371, 1316, 1324
ErhI CCWWGG 2 cut(s) 1125, 1946
FaeI CATG 6 cut(s) 842, 1247, 1469, 1734, 1757, 1950
FaqI GGGAC 2 cut(s) 19, 1909
FatI CATG 6 cut(s) 838, 1243, 1465, 1730, 1753, 1946
FauNDI CATATG 1 cut(s) 1114
FblI GTMKAC 1 cut(s) 1523
Fnu4HI GCNGC 6 cut(s) 834, 1131, 1180, 1857, 1979, 1982
FokI GGATG 6 cut(s) 74, 511, 820, 1092, 1263, 1517
FriOI GRGCYC 3 cut(s) 371, 1316, 1324
Fsp4HI GCNGC 6 cut(s) 834, 1131, 1180, 1857, 1979, 1982
FspBI CTAG 7 cut(s) 153, 227, 431, 479, 870, 1079, 1820
GluI GCNGC 6 cut(s) 834, 1131, 1180, 1857, 1979, 1982
HaeIII GGCC 5 cut(s) 324, 369, 407, 1690, 1744
HapII CCGG 4 cut(s) 593, 889, 1365, 1894
HgaI GACGC 1 cut(s) 685
Hin1II CATG 6 cut(s) 842, 1247, 1469, 1734, 1757, 1950
HindIII AAGCTT 3 cut(s) 534, 1878, 1936
HpaII CCGG 4 cut(s) 593, 889, 1365, 1894
HphI GGTGA 5 cut(s) 128, 286, 706, 1001, 1853
Hpy166II GTNNAC 3 cut(s) 1524, 1541, 1828
Hpy188III TCNNGA 2 cut(s) 479, 593
Hpy8I GTNNAC 3 cut(s) 1524, 1541, 1828
Hpy99I CGWCG 1 cut(s) 1095
HpyAV CCTTC 6 cut(s) 289, 811, 1669, 1680, 1925, 1945
HpyCH4III ACNGT 9 cut(s) 412, 583, 617, 923, 1075, 1235, 1309, 1441, 1628
HpyCH4IV ACGT 3 cut(s) 447, 646, 1093
HpyF10VI GCNNNNNNNGC 2 cut(s) 839, 1714
HpyF3I CTNAG 7 cut(s) 39, 270, 347, 529, 1185, 1207, 1986
HpySE526I ACGT 3 cut(s) 447, 646, 1093
Hsp92II CATG 6 cut(s) 842, 1247, 1469, 1734, 1757, 1950
Kpn2I TCCGGA 1 cut(s) 592
KpnI GGTACC 1 cut(s) 208
LguI GCTCTTC 1 cut(s) 1698
LmnI GCTCC 4 cut(s) 595, 910, 926, 1558
Lsp1109I GCAGC 4 cut(s) 820, 1117, 1166, 1965
LweI GCATC 4 cut(s) 1567, 1717, 1717, 1965
MaeI CTAG 7 cut(s) 153, 227, 431, 479, 870, 1079, 1820
MaeII ACGT 3 cut(s) 447, 646, 1093
MaeIII GTNAC 5 cut(s) 443, 577, 917, 989, 1748
MflI RGATCY 7 cut(s) 172, 424, 891, 1216, 1678, 1762, 1834
MhlI GDGCHC 6 cut(s) 353, 371, 867, 1316, 1324, 1635
MlyI GAGTC 2 cut(s) 1351, 1654
MmeI TCCRAC 2 cut(s) 54, 590
Mph1103I ATGCAT 1 cut(s) 1732
MroI TCCGGA 1 cut(s) 592
MroXI GAANNNNTTC 1 cut(s) 963
MseI TTAA 7 cut(s) 360, 540, 714, 822, 1287, 1770, 1883
MslI CAYNNNNRTG 2 cut(s) 945, 1242
MspI CCGG 4 cut(s) 593, 889, 1365, 1894
MspR9I CCNGG 3 cut(s) 889, 1895, 1928
MvaI CCWGG 1 cut(s) 1928
MvnI CGCG 1 cut(s) 910
MwoI GCNNNNNNNGC 2 cut(s) 839, 1714
NciI CCSGG 2 cut(s) 889, 1895
NcoI CCATGG 1 cut(s) 1946
NdeI CATATG 1 cut(s) 1114
NlaIII CATG 6 cut(s) 842, 1247, 1469, 1734, 1757, 1950
NlaIV GGNNCC 8 cut(s) 7, 174, 206, 369, 474, 614, 886, 893
NmuCI GTSAC 2 cut(s) 989, 1748
NsiI ATGCAT 1 cut(s) 1732
NspI RCATGY 2 cut(s) 842, 1734
NspV TTCGAA 1 cut(s) 260
PciSI GCTCTTC 1 cut(s) 1698
PdmI GAANNNNTTC 1 cut(s) 963
PfeI GAWTC 8 cut(s) 488, 502, 596, 602, 1061, 1211, 1592, 1781
Pfl23II CGTACG 1 cut(s) 1692
PflMI CCANNNNNTGG 1 cut(s) 1535
PfoI TCCNGGA 1 cut(s) 887
PkrI GCNGC 6 cut(s) 835, 1132, 1181, 1858, 1980, 1983
Ple19I CGATCG 1 cut(s) 1870
PleI GAGTC 2 cut(s) 1351, 1653
PpsI GAGTC 2 cut(s) 1351, 1653
PpuMI RGGWCCY 2 cut(s) 6, 1378
PshBI ATTAAT 1 cut(s) 1287
Psp124BI GAGCTC 1 cut(s) 1324
Psp1406I AACGTT 1 cut(s) 447
Psp5II RGGWCCY 2 cut(s) 6, 1378
Psp6I CCWGG 1 cut(s) 1926
PspGI CCWGG 1 cut(s) 1926
PspLI CGTACG 1 cut(s) 1692
PspN4I GGNNCC 8 cut(s) 7, 174, 206, 369, 474, 614, 886, 893
PspOMI GGGCCC 1 cut(s) 367
PspPI GGNCC 6 cut(s) 6, 367, 368, 405, 1378, 1742
PspPPI RGGWCCY 2 cut(s) 6, 1378
PsuI RGATCY 7 cut(s) 172, 424, 891, 1216, 1678, 1762, 1834
PvuI CGATCG 1 cut(s) 1870
RgaI GCGATCGC 1 cut(s) 1870
RsaI GTAC 6 cut(s) 206, 1021, 1077, 1464, 1694, 1829
RsaNI GTAC 6 cut(s) 205, 1020, 1076, 1463, 1693, 1828
RseI CAYNNNNRTG 2 cut(s) 945, 1242
SacI GAGCTC 1 cut(s) 1324
SapI GCTCTTC 1 cut(s) 1698
SaqAI TTAA 7 cut(s) 360, 540, 714, 822, 1287, 1770, 1883
SatI GCNGC 6 cut(s) 834, 1131, 1180, 1857, 1979, 1982
Sau96I GGNCC 6 cut(s) 6, 367, 368, 405, 1378, 1742
SchI GAGTC 2 cut(s) 1351, 1654
ScrFI CCNGG 3 cut(s) 889, 1895, 1928
SduI GDGCHC 6 cut(s) 353, 371, 867, 1316, 1324, 1635
SfaAI GCGATCGC 1 cut(s) 1870
SfaNI GCATC 4 cut(s) 1567, 1717, 1717, 1965
SfuI TTCGAA 1 cut(s) 260
SgfI GCGATCGC 1 cut(s) 1870
SinI GGWCC 2 cut(s) 6, 1378
SmiMI CAYNNNNRTG 2 cut(s) 945, 1242
SmlI CTYRAG 2 cut(s) 326, 1712
SmoI CTYRAG 2 cut(s) 326, 1712
SsiI CCGC 3 cut(s) 908, 1856, 1982
SspI AATATT 3 cut(s) 47, 763, 1030
SspMI CTAG 7 cut(s) 153, 227, 431, 479, 870, 1079, 1820
SstI GAGCTC 1 cut(s) 1324
StyD4I CCNGG 3 cut(s) 887, 1893, 1926
StyI CCWWGG 2 cut(s) 1125, 1946
TaaI ACNGT 9 cut(s) 412, 583, 617, 923, 1075, 1235, 1309, 1441, 1628
TaiI ACGT 3 cut(s) 450, 649, 1096
TaqI TCGA 2 cut(s) 260, 1090
TatI WGTACW 3 cut(s) 1075, 1462, 1827
TauI GCSGC 2 cut(s) 1859, 1984
TfiI GAWTC 8 cut(s) 488, 502, 596, 602, 1061, 1211, 1592, 1781
Tru1I TTAA 7 cut(s) 360, 540, 714, 822, 1287, 1770, 1883
Tru9I TTAA 7 cut(s) 360, 540, 714, 822, 1287, 1770, 1883
TscAI CASTG 5 cut(s) 415, 512, 573, 588, 1407
TseFI GTSAC 2 cut(s) 989, 1748
TseI GCWGC 4 cut(s) 833, 1130, 1179, 1978
Tsp45I GTSAC 2 cut(s) 989, 1748
TspRI CASTG 5 cut(s) 415, 512, 573, 588, 1407
Van91I CCANNNNNTGG 1 cut(s) 1535
VpaK11BI GGWCC 2 cut(s) 6, 1378
VspI ATTAAT 1 cut(s) 1287
XapI RAATTY 4 cut(s) 124, 286, 1369, 1481
XbaI TCTAGA 1 cut(s) 478
XceI RCATGY 2 cut(s) 842, 1734
XmiI GTMKAC 1 cut(s) 1523
XmnI GAANNNNTTC 1 cut(s) 963
XspI CTAG 7 cut(s) 153, 227, 431, 479, 870, 1079, 1820
Zsp2I ATGCAT 1 cut(s) 1732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.