Rorug01G0171300

invertase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0001702
Physical Location & Seq
Forward (+)
23316941 .. 23320666
3726 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0171300.1

Sequence Viewer

Length: 2148 bp
ATGAGAAAACCACCGAAATCTAAGAAGGCCCGAAAGCAGAAGCGGGAATCGGAGGTTGAAGAAATCAAGGTTCTAAATTCATGGATCGAATCCCAGAAACCCGACTGCGGCTCCAATCCCATGTCTCTCCCACCTTTACCCACAAAATCACCCATTGGCCGCCTGAACTCCACACCCACCTTTTCTCGCTACGCTGGCACCACCAGCTTCCATCAGTTGCCGATTTCCAAGAGGACCAAGGACGCCTTGCGCCGAGCTAACTTCACCCACATGACCGATATCCAGAGGGCGTCTTTGCCTCACGCGCTCTGCGGCAGAGATATTCTCGGTGCCGCCAAGACTGGCTCCGGCAAGACTCTGGCTTTTGTAATACCGGTTCTAGAAAAATTACATAGGGAGAGATGGAATCCTGAGGATGGGGTAGGCAGCATCATAATTTCTCCGACAAGGGAATTAGCTGCTCAAACTTTTGATGTACTAAAATGGGTTGGCAAGTACCATAATTTTAGTGCTGGACTCTTAATTGGTGGTCGTAAAGATGTTCAAGTGGAAAAGGAGCGAGTTAATGGTCTCAACATACTAGTCTGTACTCCTGGCCGTCTTCTTCAGCACATGGATGAGACACCAAATTTTGATTGTTCCCAGCTTCAGGTTTTGGTCCTTGATGAGGCAGATCGTATTCTTGATGTGGGATTTAAAAAGACACTGAATGCGGTCATCTCACAGCTACCTAAGAGAAGACAAACTCTTCTCTTCTCAGCAACTCAAACAAAGTCGGTTCAAGATCTTGCAAGACTAAGTTTGAAGGACCCAGAGTACCTCAGCGTGCATGAGAAGTCTACTAGAGCCACTCCCAATCATTTACAGCAAACAGCAATCATTGTTCCACTGGATCAAAAAATAGACATGTTGTGGAGCTTCATAAAGGCACATCTAAATTCTAGGATTCTAGTGTTTCTATCAACCCGCAAGCAGGTAAAATTTGTCTTTGAAGCATTTAAAAAGCTGCGTCCTGGAATACCCTTGAAGTGTCTTCATGGTAAGATGAAGCAAGAGGGAAGAATGGGAACATACTCACAGTTTCATGAAAAACCTTCAGTTCTCTTCTCGACTGATGTGGCTTCAAGAGGCCTTGACTTCAACAAGGCAGTTGACTGGGTTGTTCAGGTGGATTGTCCAGAAGATGTTGCAGCATACATACACAGAGTTGGCCGAACTGCCCGCTATCATTCTGAAGGGCGATCTGTTTTATTTCTGATGCCCTCAGAACAGAAAATGCTTGAGAAATTAAATGCTGCAAGAATACCCATTCAGCTCATCAAGGCTAACAACAAAAGGCTTCAACCAGTGTCTCCATTGTTGTCATCTTTGCTAGTCAAGTATCCTGATACACTCCTGGGTCTGGCAAAAAGGGCCTTTATCACTTACTTGAAGTCCATTCAAAATCACAAGGACAAAGAAATTTTTAATCTGTTGGAACTGCCACTTAATGAATTTTCAGCATCTATGGGTCTACCAATGACCCCCAGAATCCGTTCTTCAAATCAGAAAATGAAGTCCAAGACAGAGGGAGAACTATATCCTATTGGTGAATCAGAAAGTTCTGACATGGAGAACGGATTGGAGATTCCCAAAGAGGAACTTGATATTGGTGATTTGAATGAGGGGGAAGTGGATAACGATGTTCTTCTAACAAATGAGGGAACAGAGGAAGGAACAAAAATTGGAGATAATGTGCCAGCGACTCGAGTCATGAAGAAAAGGAAGTTTAATTTGACTATCTATAGACCTATGGGAACTAGGCGAGTCTTTGATGATTCGTGCAACTCGATATCGCCCTTTGCAAAGATGGCTGGTACCATACATGCTAGTGATCCCATATTGCTTGATGAACTTAAAGACAAGAAACACAAATATTATGATAAGGTTAGGGAAGAGCTGAAGAGATCAGAACCAGAAGACAAGATTCTAGACCGCCAGCGTTGCAATGAAAAACGAAGGAAAGAGAAGATGAAGAGGAGTAGAGTGAATGAAGGAGAAGAGGAACAGGATGATCTTTCTGATTCCAAAGAAGAGCCATATGAGTATCGACCATGCAAAAGGGTAAAGAACAAAAAATGCAAGGAAAAAGAAGGGGTTTGCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMEI

Protein Analysis

715

Amino Acids

81.37

Weight (kDa)

9.41

Isoelectric Point (pI)

49.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 92 - 263 2.2e-44 DEAD/DEAH box helicase
ResIII PF04851 111 - 255 5e-06 Type III restriction enzyme, res subunit
Helicase_C PF00271 300 - 409 2.8e-23 Helicase conserved C-terminal domain
CTE_SPB4 PF13959 465 - 511 2e-11 ATP-dependent rRNA helicase SPB4-like, C-terminal extension
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 964
Acc65I GGTACC 1 cut(s) 1856
AccB1I GGYRCC 3 cut(s) 197, 329, 1856
AccI GTMKAC 2 cut(s) 839, 1513
AccII CGCG 1 cut(s) 305
AciI CCGC 9 cut(s) 43, 108, 160, 312, 333, 713, 967, 1222, 1975
AclWI GGATC 3 cut(s) 92, 900, 1868
AcoI YGGCCR 3 cut(s) 157, 595, 1210
AcsI RAATTY 6 cut(s) 76, 628, 937, 980, 1461, 1493
AcuI CTGAAG 5 cut(s) 590, 632, 1080, 1254, 1961
AcyI GRCGYC 2 cut(s) 243, 290
AfaI GTAC 5 cut(s) 477, 497, 589, 818, 1858
AfiI CCNNNNNNNGG 6 cut(s) 107, 416, 649, 667, 973, 1402
AflIII ACRYGT 1 cut(s) 906
AgeI ACCGGT 1 cut(s) 373
AhlI ACTAGT 1 cut(s) 580
AjnI CCWGG 3 cut(s) 592, 1012, 1395
AjuI GAANNNNNNNTTGG 2 cut(s) 1632, 1664
AluBI AGCT 9 cut(s) 207, 257, 458, 646, 727, 918, 1006, 1315, 1939
AluI AGCT 9 cut(s) 207, 257, 458, 646, 727, 918, 1006, 1315, 1939
Alw26I GTCTC 4 cut(s) 129, 575, 614, 1356
AlwI GGATC 3 cut(s) 92, 900, 1868
Ama87I CYCGRG 1 cut(s) 1746
AoxI GGCC 6 cut(s) 27, 157, 595, 1129, 1210, 1413
ApeKI GCWGC 6 cut(s) 426, 458, 1006, 1190, 1295, 2142
ApoI RAATTY 6 cut(s) 76, 628, 937, 980, 1461, 1493
AsiGI ACCGGT 1 cut(s) 373
Asp700I GAANNNNTTC 1 cut(s) 1534
Asp718I GGTACC 1 cut(s) 1856
AspLEI GCGC 2 cut(s) 252, 307
AspS9I GGNCC 5 cut(s) 28, 234, 658, 808, 1413
AsuHPI GGTGA 4 cut(s) 141, 256, 1601, 1664
AvaI CYCGRG 1 cut(s) 1746
AvaII GGWCC 3 cut(s) 234, 658, 808
AxyI CCTNAGG 1 cut(s) 411
BanI GGYRCC 3 cut(s) 197, 329, 1856
BbsI GAAGAC 4 cut(s) 593, 745, 1025, 1965
BbvCI CCTCAGC 1 cut(s) 821
BbvI GCAGC 6 cut(s) 438, 445, 993, 1202, 1282, 2129
BccI CCATC 4 cut(s) 219, 396, 410, 1843
BceAI ACGGC 1 cut(s) 582
BciT130I CCWGG 3 cut(s) 594, 1014, 1397
BciVI GTATCC 1 cut(s) 1392
BcoDI GTCTC 4 cut(s) 129, 575, 614, 1356
BcuI ACTAGT 1 cut(s) 580
BfaI CTAG 9 cut(s) 380, 581, 843, 942, 950, 1373, 1800, 1869, 1970
BfmI CTRYAG 1 cut(s) 1783
BfuAI ACCTGC 1 cut(s) 964
BfuI GTATCC 1 cut(s) 1392
BglII AGATCT 1 cut(s) 784
Bme1390I CCNGG 3 cut(s) 594, 1014, 1397
Bme18I GGWCC 3 cut(s) 234, 658, 808
BmeT110I CYCGRG 1 cut(s) 1746
BmgT120I GGNCC 5 cut(s) 28, 234, 658, 808, 1413
BmiI GGNNCC 6 cut(s) 112, 199, 331, 346, 810, 1858
BmrFI CCNGG 3 cut(s) 594, 1014, 1397
BmrI ACTGGG 1 cut(s) 1165
BmsI GCATC 3 cut(s) 438, 1248, 1511
BmuI ACTGGG 1 cut(s) 1165
BoxI GACNNNNGTC 1 cut(s) 1748
BpiI GAAGAC 4 cut(s) 593, 745, 1025, 1965
BplI GAGNNNNNCTC 2 cut(s) 309, 341
Bpu10I CCTNAGC 1 cut(s) 821
BpuEI CTTGAG 1 cut(s) 1301
BsaHI GRCGYC 2 cut(s) 243, 290
BsaI GGTCTC 1 cut(s) 575
BsaJI CCNNGG 2 cut(s) 237, 1396
BsaWI WCCGGW 1 cut(s) 373
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 1719, 1749
Bsc4I CCNNNNNNNGG 6 cut(s) 107, 416, 649, 667, 973, 1402
Bse118I RCCGGY 1 cut(s) 373
Bse1I ACTGG 4 cut(s) 346, 894, 1160, 1346
Bse21I CCTNAGG 1 cut(s) 411
Bse3DI GCAATG 1 cut(s) 1993
BseBI CCWGG 3 cut(s) 594, 1014, 1397
BseDI CCNNGG 2 cut(s) 237, 1396
BseGI GGATG 3 cut(s) 421, 622, 2056
BseLI CCNNNNNNNGG 6 cut(s) 107, 416, 649, 667, 973, 1402
BseMI GCAATG 1 cut(s) 1993
BseMII CTCAG 4 cut(s) 402, 771, 835, 1278
BseNI ACTGG 4 cut(s) 346, 894, 1160, 1346
BseRI GAGGAG 1 cut(s) 2032
BseXI GCAGC 6 cut(s) 438, 445, 993, 1202, 1282, 2129
BseYI CCCAGC 1 cut(s) 642
Bsh1236I CGCG 1 cut(s) 305
BshFI GGCC 6 cut(s) 29, 159, 597, 1131, 1212, 1415
BshNI GGYRCC 3 cut(s) 197, 329, 1856
BshTI ACCGGT 1 cut(s) 373
BsiHKCI CYCGRG 1 cut(s) 1746
BsiSI CCGG 2 cut(s) 348, 374
BslI CCNNNNNNNGG 6 cut(s) 107, 416, 649, 667, 973, 1402
BsmAI GTCTC 4 cut(s) 129, 575, 614, 1356
BsmI GAATGC 1 cut(s) 715
BsnI GGCC 6 cut(s) 29, 159, 597, 1131, 1212, 1415
Bso31I GGTCTC 1 cut(s) 575
BsoBI CYCGRG 1 cut(s) 1746
Bsp143I GATC 8 cut(s) 84, 673, 784, 892, 1241, 1873, 1946, 2053
BspACI CCGC 9 cut(s) 43, 108, 160, 312, 333, 713, 967, 1222, 1975
BspANI GGCC 6 cut(s) 29, 159, 597, 1131, 1212, 1415
BspCNI CTCAG 4 cut(s) 403, 770, 834, 1277
BspFNI CGCG 1 cut(s) 305
BspHI TCATGA 2 cut(s) 1084, 1752
BspLI GGNNCC 6 cut(s) 112, 199, 331, 346, 810, 1858
BspMI ACCTGC 1 cut(s) 964
BspPI GGATC 3 cut(s) 92, 900, 1868
BspQI GCTCTTC 2 cut(s) 1929, 2067
BspT107I GGYRCC 3 cut(s) 197, 329, 1856
BspTNI GGTCTC 1 cut(s) 575
BsrDI GCAATG 1 cut(s) 1993
BsrFI RCCGGY 1 cut(s) 373
BsrI ACTGG 4 cut(s) 346, 894, 1160, 1346
BssAI RCCGGY 1 cut(s) 373
BssECI CCNNGG 2 cut(s) 237, 1396
BssMI GATC 8 cut(s) 84, 673, 784, 892, 1241, 1873, 1946, 2053
BssNI GRCGYC 2 cut(s) 243, 290
BssT1I CCWWGG 1 cut(s) 237
Bst2UI CCWGG 3 cut(s) 594, 1014, 1397
Bst4CI ACNGT 1 cut(s) 1080
Bst6I CTCTTC 8 cut(s) 753, 758, 1109, 1929, 1937, 2009, 2034, 2067
BstACI GRCGYC 2 cut(s) 243, 290
BstC8I GCNNGC 6 cut(s) 196, 827, 971, 1222, 1740, 1979
BstDEI CTNAG 7 cut(s) 21, 411, 732, 757, 797, 821, 1264
BstENI CCTNNNNNAGG 1 cut(s) 665
BstF5I GGATG 3 cut(s) 421, 622, 2056
BstFNI CGCG 1 cut(s) 305
BstHHI GCGC 2 cut(s) 252, 307
BstKTI GATC 8 cut(s) 87, 676, 787, 895, 1244, 1876, 1949, 2056
BstMAI GTCTC 4 cut(s) 129, 575, 614, 1356
BstMBI GATC 8 cut(s) 84, 673, 784, 892, 1241, 1873, 1946, 2053
BstMWI GCNNNNNNNGC 6 cut(s) 195, 204, 304, 1412, 1850, 1983
BstNI CCWGG 3 cut(s) 594, 1014, 1397
BstNSI RCATGY 2 cut(s) 910, 1868
BstPAI GACNNNNGTC 1 cut(s) 1748
BstSCI CCNGG 3 cut(s) 592, 1012, 1395
BstSFI CTRYAG 1 cut(s) 1783
BstUI CGCG 1 cut(s) 305
BstV1I GCAGC 6 cut(s) 438, 445, 993, 1202, 1282, 2129
BstV2I GAAGAC 4 cut(s) 593, 745, 1025, 1965
BstX2I RGATCY 1 cut(s) 784
BstYI RGATCY 1 cut(s) 784
Bsu36I CCTNAGG 1 cut(s) 411
BsuI GTATCC 1 cut(s) 1392
BsuRI GGCC 6 cut(s) 29, 159, 597, 1131, 1212, 1415
BtsCI GGATG 3 cut(s) 421, 622, 2056
BtsIMutI CAGTG 3 cut(s) 704, 887, 1353
BveI ACCTGC 1 cut(s) 964
Cac8I GCNNGC 6 cut(s) 196, 827, 971, 1222, 1740, 1979
CciI TCATGA 2 cut(s) 1084, 1752
CfoI GCGC 2 cut(s) 252, 307
Cfr10I RCCGGY 1 cut(s) 373
Cfr13I GGNCC 5 cut(s) 28, 234, 658, 808, 1413
CseI GACGC 3 cut(s) 251, 279, 998
Csp6I GTAC 5 cut(s) 476, 496, 588, 817, 1857
CspAI ACCGGT 1 cut(s) 373
CviQI GTAC 5 cut(s) 476, 496, 588, 817, 1857
DdeI CTNAG 7 cut(s) 21, 411, 732, 757, 797, 821, 1264
DpnI GATC 8 cut(s) 86, 675, 786, 894, 1243, 1875, 1948, 2055
DpnII GATC 8 cut(s) 84, 673, 784, 892, 1241, 1873, 1946, 2053
DraI TTTAAA 2 cut(s) 697, 1000
EaeI YGGCCR 3 cut(s) 157, 595, 1210
Eam1104I CTCTTC 8 cut(s) 753, 758, 1109, 1929, 1937, 2009, 2034, 2067
EarI CTCTTC 8 cut(s) 753, 758, 1109, 1929, 1937, 2009, 2034, 2067
Eco130I CCWWGG 1 cut(s) 237
Eco147I AGGCCT 1 cut(s) 1131
Eco31I GGTCTC 1 cut(s) 575
Eco32I GATATC 2 cut(s) 280, 1833
Eco47I GGWCC 3 cut(s) 234, 658, 808
Eco57I CTGAAG 5 cut(s) 590, 632, 1080, 1254, 1961
Eco81I CCTNAGG 1 cut(s) 411
Eco88I CYCGRG 1 cut(s) 1746
EcoNI CCTNNNNNAGG 1 cut(s) 665
EcoO109I RGGNCCY 2 cut(s) 808, 1413
EcoRII CCWGG 3 cut(s) 592, 1012, 1395
EcoRV GATATC 2 cut(s) 280, 1833
EcoT14I CCWWGG 1 cut(s) 237
ErhI CCWWGG 1 cut(s) 237
FalI AAGNNNNNCTT 4 cut(s) 230, 262, 1626, 1658
FauI CCCGC 3 cut(s) 36, 974, 1229
FauNDI CATATG 1 cut(s) 2080
FblI GTMKAC 2 cut(s) 839, 1513
FokI GGATG 3 cut(s) 428, 629, 2063
FspBI CTAG 9 cut(s) 380, 581, 843, 942, 950, 1373, 1800, 1869, 1970
GlaI GCGC 2 cut(s) 251, 306
GsaI CCCAGC 1 cut(s) 646
HaeIII GGCC 6 cut(s) 29, 159, 597, 1131, 1212, 1415
HapII CCGG 2 cut(s) 348, 374
HgaI GACGC 3 cut(s) 251, 279, 998
HhaI GCGC 2 cut(s) 252, 307
Hin1I GRCGYC 2 cut(s) 243, 290
Hin6I GCGC 2 cut(s) 250, 305
HinP1I GCGC 2 cut(s) 250, 305
HincII GTYRAC 1 cut(s) 1153
HindII GTYRAC 1 cut(s) 1153
HpaII CCGG 2 cut(s) 348, 374
HphI GGTGA 4 cut(s) 141, 256, 1601, 1664
Hpy166II GTNNAC 3 cut(s) 840, 1153, 1514
Hpy8I GTNNAC 3 cut(s) 840, 1153, 1514
HpyAV CCTTC 8 cut(s) 19, 799, 1104, 1229, 1706, 1992, 2027, 2126
HpyCH4III ACNGT 1 cut(s) 1080
HpyCH4V TGCA 9 cut(s) 791, 829, 1190, 1298, 1824, 1844, 1986, 2097, 2121
HpyF10VI GCNNNNNNNGC 6 cut(s) 195, 204, 304, 1412, 1850, 1983
HpyF3I CTNAG 7 cut(s) 21, 411, 732, 757, 797, 821, 1264
Hsp92I GRCGYC 2 cut(s) 243, 290
HspAI GCGC 2 cut(s) 250, 305
KpnI GGTACC 1 cut(s) 1860
Kzo9I GATC 8 cut(s) 84, 673, 784, 892, 1241, 1873, 1946, 2053
LguI GCTCTTC 2 cut(s) 1929, 2067
LmnI GCTCC 4 cut(s) 116, 350, 556, 915
Lsp1109I GCAGC 6 cut(s) 438, 445, 993, 1202, 1282, 2129
LweI GCATC 3 cut(s) 438, 1248, 1511
MaeI CTAG 9 cut(s) 380, 581, 843, 942, 950, 1373, 1800, 1869, 1970
MalI GATC 8 cut(s) 86, 675, 786, 894, 1243, 1875, 1948, 2055
MboI GATC 8 cut(s) 84, 673, 784, 892, 1241, 1873, 1946, 2053
MflI RGATCY 1 cut(s) 784
MlyI GAGTC 5 cut(s) 349, 510, 1738, 1758, 1815
MmeI TCCRAC 2 cut(s) 467, 1455
MroXI GAANNNNTTC 1 cut(s) 1534
MseI TTAA 9 cut(s) 521, 564, 696, 999, 1289, 1467, 1488, 1770, 1896
MslI CAYNNNNRTG 3 cut(s) 269, 615, 1869
MspI CCGG 2 cut(s) 348, 374
MspR9I CCNGG 3 cut(s) 594, 1014, 1397
Mva1269I GAATGC 1 cut(s) 715
MvaI CCWGG 3 cut(s) 594, 1014, 1397
MvnI CGCG 1 cut(s) 305
MwoI GCNNNNNNNGC 6 cut(s) 195, 204, 304, 1412, 1850, 1983
NdeI CATATG 1 cut(s) 2080
NdeII GATC 8 cut(s) 84, 673, 784, 892, 1241, 1873, 1946, 2053
NlaIV GGNNCC 6 cut(s) 112, 199, 331, 346, 810, 1858
NmeAIII GCCGAG 1 cut(s) 278
NspI RCATGY 2 cut(s) 910, 1868
PaeR7I CTCGAG 1 cut(s) 1746
PagI TCATGA 2 cut(s) 1084, 1752
PceI AGGCCT 1 cut(s) 1131
PciI ACATGT 1 cut(s) 906
PciSI GCTCTTC 2 cut(s) 1929, 2067
PcsI WCGNNNNNNNCGW 1 cut(s) 1826
PctI GAATGC 1 cut(s) 715
PdmI GAANNNNTTC 1 cut(s) 1534
PfoI TCCNGGA 1 cut(s) 1012
PinAI ACCGGT 1 cut(s) 373
PleI GAGTC 5 cut(s) 349, 510, 1738, 1757, 1814
PpsI GAGTC 5 cut(s) 349, 510, 1738, 1757, 1814
PpuMI RGGWCCY 1 cut(s) 808
PscI ACATGT 1 cut(s) 906
PshAI GACNNNNGTC 1 cut(s) 1748
Psp5II RGGWCCY 1 cut(s) 808
Psp6I CCWGG 3 cut(s) 592, 1012, 1395
PspFI CCCAGC 1 cut(s) 642
PspGI CCWGG 3 cut(s) 592, 1012, 1395
PspN4I GGNNCC 6 cut(s) 112, 199, 331, 346, 810, 1858
PspPI GGNCC 5 cut(s) 28, 234, 658, 808, 1413
PspPPI RGGWCCY 1 cut(s) 808
PspXI VCTCGAGB 1 cut(s) 1746
PsrI GAACNNNNNNTAC 2 cut(s) 360, 392
PsuI RGATCY 1 cut(s) 784
RsaI GTAC 5 cut(s) 477, 497, 589, 818, 1858
RsaNI GTAC 5 cut(s) 476, 496, 588, 817, 1857
RseI CAYNNNNRTG 3 cut(s) 269, 615, 1869
SapI GCTCTTC 2 cut(s) 1929, 2067
SaqAI TTAA 9 cut(s) 521, 564, 696, 999, 1289, 1467, 1488, 1770, 1896
Sau3AI GATC 8 cut(s) 84, 673, 784, 892, 1241, 1873, 1946, 2053
Sau96I GGNCC 5 cut(s) 28, 234, 658, 808, 1413
SchI GAGTC 5 cut(s) 349, 510, 1738, 1758, 1815
ScrFI CCNGG 3 cut(s) 594, 1014, 1397
SfaNI GCATC 3 cut(s) 438, 1248, 1511
SfcI CTRYAG 1 cut(s) 1783
Sfr274I CTCGAG 1 cut(s) 1746
SinI GGWCC 3 cut(s) 234, 658, 808
SlaI CTCGAG 1 cut(s) 1746
SmiMI CAYNNNNRTG 3 cut(s) 269, 615, 1869
SmlI CTYRAG 2 cut(s) 1280, 1746
SmoI CTYRAG 2 cut(s) 1280, 1746
SpeI ACTAGT 1 cut(s) 580
SseBI AGGCCT 1 cut(s) 1131
SsiI CCGC 9 cut(s) 43, 108, 160, 312, 333, 713, 967, 1222, 1975
SspI AATATT 1 cut(s) 1916
SspMI CTAG 9 cut(s) 380, 581, 843, 942, 950, 1373, 1800, 1869, 1970
StuI AGGCCT 1 cut(s) 1131
StyD4I CCNGG 3 cut(s) 592, 1012, 1395
StyI CCWWGG 1 cut(s) 237
TaaI ACNGT 1 cut(s) 1080
TaqI TCGA 5 cut(s) 87, 1109, 1747, 1829, 2089
TaqII GACCGA 1 cut(s) 290
TatI WGTACW 2 cut(s) 475, 587
TauI GCSGC 4 cut(s) 111, 162, 315, 335
Tru1I TTAA 9 cut(s) 521, 564, 696, 999, 1289, 1467, 1488, 1770, 1896
Tru9I TTAA 9 cut(s) 521, 564, 696, 999, 1289, 1467, 1488, 1770, 1896
TscAI CASTG 3 cut(s) 711, 894, 1353
TseI GCWGC 6 cut(s) 426, 458, 1006, 1190, 1295, 2142
TspGWI ACGGA 2 cut(s) 1523, 1632
TspRI CASTG 3 cut(s) 711, 894, 1353
VpaK11BI GGWCC 3 cut(s) 234, 658, 808
XagI CCTNNNNNAGG 1 cut(s) 665
XapI RAATTY 6 cut(s) 76, 628, 937, 980, 1461, 1493
XbaI TCTAGA 2 cut(s) 379, 1969
XceI RCATGY 2 cut(s) 910, 1868
XhoI CTCGAG 1 cut(s) 1746
XmiI GTMKAC 2 cut(s) 839, 1513
XmnI GAANNNNTTC 1 cut(s) 1534
XspI CTAG 9 cut(s) 380, 581, 843, 942, 950, 1373, 1800, 1869, 1970
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.