Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001837

Physical Location & Seq

Genomic Coordinates Forward (+)

57410506 .. 57417063

Gene Structure 6558 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0488800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGGCGCCTTCCTCATCTGCAAGTTCGGGTGAAGATTCATCAACCCCGGACACCACCCAAAGCCACCTCCAGCATAGTTTCCTTCTTCACAAAGCATCTGATAAATTAATTTCAAGTGGCAAAGCCCGGAGGAGGAGGAGGAGGATTGATCTGTCCCCCACAAAGACCGACGACGACAAGAAGCAATCCGATGATGAACGCTGGTTGAGAATGGAAGCTTTTCAGTTAGTTTGGTCAAGAATTGAATCCACTATCAACCATGTTCTGCGGAATATCAATGCTCGGGTTTTCGATCACATACGCCGCTGGGTCTGGGATTCCTTCAATGCTGCTATCAAACCACTTGCCACCATTTCTCCTGGCCCTTTTCCTATTGTCAGCCAAGTTACCTGTACACAGCTCTTCACTGGGCTCCTTCTCACCAATAATATGGAGTTTGTTGATGATATTTCGACATTTCAAGAGCTGGGCCTCTGCTTGAAATCCCATGGATGCCATGTGGCTAACCTTTCCTCCTTCGACTTTTCATCCAAGAATGGGATCGCTGGCTGTCTCACAAGTTTATTGAGACAGTTTCTCATGTCTACTTTTGATGCTGCTGATATGTCCATACTGGCATCATGGTACAGTCGGCAAGGAAACTATGGTTCCCCTGTGGTTGTCATTATAGATGATATGGAACGATGTTGTGGTGCTGTCTTGTCTGATTTCATTCTTATGTTGAGTGAATGGGTTGTGAAGATCCCAGTCATCTTAATAATGGGCGTTGCGACAACTCTGGATGCCCCTAGAAAAATACTTTCTTCAAATGTACTGCAGAAGTTGTGCCCTTGCAACTTCAAGTTGGGATCACCTGCTGAGAGGATGGATGCAGTTGTTGAGGCTGCTCTTGTGAGGCAGTGTTCTGGTTTTGCTGTTGGTCATAAGGTGGCTGTTTTTCTGCGGAACTATTTCTTAAATCAGGATGGTACATTGACATCTTTTGTTAGAGCATTGAAGATAGCATGTGTTCAACATTTTTCCACGGAGCCTTTAAGCTTCCTGCTTGGATGGTTGCTTGTTAAAGAAGACAGTAAGGGAGTTCAGAGTGAGAAAGCGGTCAAGCTTGCTTCTGAGCTTTTATCTCTTGCAAGGAATCAAATAGCTGAACAAACTGAAGTCACTATAGTTCATAGTTTGACAGAGTTGACGAAATTGCAGAAGCTCTGGAGCACCGTTGTTCTGTGCTTATATGAAGCTGGGAAGTGTAACAAAACTCGATTGATAGACTTATTTTGTGAGGCACTTGATCCAGATACTTACAACTTATTGGCTTCTGATGGTCTTACTGGAACTGGAAAAGGTCTTGTTCAATCTTTGTCAAGTGATCACTGTATGCTTGAGCAGAACTTGAGCTACAGAAAGGGACGCTTTATTTGCCAATTATTAGGTAGAGTGAGGGATCTTCCTGCAGCATTGCTTTGTCGGCTGCTGAATAGTTGGAAAAATCTCACTGTGGATGTTCTTGAGATTCATGACAAGGTAAAGGAGCTACAGTCAATATTAAAATTAGACGAAGGAAGTTGTAAACCAGATTTGAAGGAGATATCCAGAAGACATACATCTCGGAGTCCCTTAAAGATCGGTGAATCACAATCAATAAATGAAAAAGCCGCTATACTAATGGATTGCATGGTTAGGGATTTCATGAAGCCGATTGAGTGTACAGCTTTTCACGAAATTGTTTGCTATAGAAATGTTGAAAACCTTCAATCGGCATTAATTGGAGACTCACGGAAAATGATTCAAGTTGATCTTTTGGAGTTTCATAAAACCCTACAATGCAGTTGCTGCAGGAGGAGTGGCAACATACCATTGCCATCAATGCCTGATACGTCTATTATGTACACCCTGGCTCAGGAGCATGGCGATCTTATCAATCTTCATGACTGGTTCCAGTCTTTTAAAACCATTGTCATTCAGTACAGCAGAAAAGGGACAAGCAAACTGAAAAAGTCCCCACTTAAGAAAAGAAAGGAAAGGAATGAATCTGAAAACAAGAGTGAAGCATCCATTCAAGCCAGATTTTGCAGGGCAATCACAGAACTACAGATTACAGGTCTCATTCGGATGCCCAGCAAAAAACGTCGTGATTGTGTGCAGAGAGTGGCCTTTGGGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000706 GO:0000729 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0003916 GO:0003918 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016853 GO:0016887 GO:0016889 GO:0016894 GO:0017111 GO:0022402 GO:0022414 GO:0030957 GO:0031974 GO:0031981 GO:0033554 GO:0034641 GO:0035825 GO:0042138 GO:0042623 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046983 GO:0048285 GO:0050896 GO:0051321 GO:0051716 GO:0061505 GO:0061982 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04113 map04113

Pfam Domains

Protein Families

TP6A_N

Protein Analysis

720

Amino Acids

80.9

Weight (kDa)

8.85

Isoelectric Point (pI)

54.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ORC3_N	PF07034	45 - 348	2.5e-64	Origin recognition complex (ORC) subunit 3 N-terminus
WHD_ORC	PF18137	592 - 718	2.3e-28	Origin recognition complex winged helix C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001837)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02011 FvH4_3g43682 FvH4_3g43730 FvH4_3g43732 FvH4_3g43751 FvH4_3g43770 FvH4_3g44582 FvH4_4g35052
malus_domestica	MD04G1181000.v1.1
pyrus_communis	pycom02g00740
rosa_chinensis	RchiOBHm_Chr2g0089331
rosa_laevigata	RLG00000005816 RLG00000016017 RLG00000016028 RLG00000016029 RLG00000037001
rosa_multiflora	Rmu_sc0000197.1_g000009 Rmu_sc0000197.1_g000011 Rmu_sc0002008.1_g000009 Rmu_sc0004031.1_g000020 Rmu_sc0008322.1_g000011 Rmu_sc0008322.1_g000014 Rmu_sc0017035.1_g000003 Rmu_sc0020026.1_g000001
rosa_roxburghii	Rroxscaffold_1G00001150 Rroxscaffold_2G00151930 Rroxscaffold_2G00152070 Rroxscaffold_3G00244680
rosa_rugosa	Rorug01G0488800 Rorug01G0489200 Rorug01G0489300 Rorug02G0000900 Rorug02G0000900 Rorug04G0354300 Rorug05G0483000
rosa_samantha	Rh2AG046000 Rh2BG044600 Rh2CG046400 Rh2DG044300 Rh2DG044400 Rh2DG044600 Rh2DG045000 Rh2DG045900 Rh2DG046000 Rh5AG531200 Rh5DG568500
rosa_wichuraiana	Rw2G003660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	862
Acc36I	ACCTGC	1 cut(s)	862
AccB1I	GGYRCC	1 cut(s)	4
AccI	GTMKAC	1 cut(s)	584
AciI	CCGC	5 cut(s)	268, 304, 943, 1097, 1653
AclWI	GGATC	5 cut(s)	548, 736, 856, 1283, 1449
AcuI	CTGAAG	1 cut(s)	1176
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	7 cut(s)	394, 626, 813, 970, 1705, 1886, 1964
AfiI	CCNNNNNNNGG	4 cut(s)	132, 537, 1753, 1897
AflII	CTTAAG	1 cut(s)	2003
AjnI	CCWGG	2 cut(s)	358, 1890
Alw21I	GWGCWC	1 cut(s)	1214
Alw26I	GTCTC	4 cut(s)	557, 562, 1761, 2105
AlwI	GGATC	5 cut(s)	548, 736, 856, 1283, 1449
AlwNI	CAGNNNCTG	1 cut(s)	1830
Ama87I	CYCGRG	1 cut(s)	282
AoxI	GGCC	3 cut(s)	361, 469, 2148
ApeKI	GCWGC	6 cut(s)	329, 596, 884, 1451, 1468, 1830
ArsI	GACNNNNNNTTYG	2 cut(s)	1398, 1430
AseI	ATTAAT	2 cut(s)	107, 1760
Asp700I	GAANNNNTTC	3 cut(s)	219, 950, 1746
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	2 cut(s)	362, 469
AsuC2I	CCSGG	2 cut(s)	47, 127
AsuHPI	GGTGA	4 cut(s)	41, 412, 843, 1637
AvaI	CYCGRG	1 cut(s)	282
BaeGI	GKGCMC	1 cut(s)	830
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	414
BbsI	GAAGAC	2 cut(s)	1074, 1600
Bbv12I	GWGCWC	1 cut(s)	1214
BbvI	GCAGC	6 cut(s)	316, 583, 871, 1455, 1463, 1817
BccI	CCATC	5 cut(s)	859, 959, 1044, 1313, 1867
BciT130I	CCWGG	2 cut(s)	360, 1892
BclI	TGATCA	1 cut(s)	1366
BcnI	CCSGG	2 cut(s)	47, 127
BcoDI	GTCTC	4 cut(s)	557, 562, 1761, 2105
BfaI	CTAG	1 cut(s)	789
BfmI	CTRYAG	8 cut(s)	815, 1164, 1396, 1449, 1532, 1729, 1831, 2087
BfoI	RGCGCY	1 cut(s)	8
BfrI	CTTAAG	1 cut(s)	2003
BfuAI	ACCTGC	1 cut(s)	862
BisI	GCNGC	8 cut(s)	304, 330, 597, 885, 1452, 1469, 1653, 1831
BlsI	GCNGC	8 cut(s)	305, 331, 598, 886, 1453, 1470, 1654, 1832
Bme1390I	CCNGG	4 cut(s)	47, 127, 360, 1892
BmeT110I	CYCGRG	1 cut(s)	282
BmgT120I	GGNCC	2 cut(s)	362, 469
BmiI	GGNNCC	5 cut(s)	6, 413, 649, 1029, 1934
BmrFI	CCNGG	4 cut(s)	47, 127, 360, 1892
BmrI	ACTGGG	2 cut(s)	417, 740
BmsI	GCATC	8 cut(s)	104, 482, 583, 626, 772, 859, 2057, 2100
BmuI	ACTGGG	2 cut(s)	417, 740
BpiI	GAAGAC	2 cut(s)	1074, 1600
BpmI	CTGGAG	2 cut(s)	53, 1228
Bpu10I	CCTNAGC	1 cut(s)	1896
BpuEI	CTTGAG	3 cut(s)	1400, 1411, 1526
BpuMI	CCSGG	2 cut(s)	47, 127
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	2105
BsaJI	CCNNGG	4 cut(s)	45, 487, 1023, 1890
BsaXI	ACNNNNNCTCC	6 cut(s)	340, 370, 497, 527, 1520, 1550
Bsc4I	CCNNNNNNNGG	4 cut(s)	132, 537, 1753, 1897
Bse1I	ACTGG	7 cut(s)	412, 618, 746, 1333, 1339, 1934, 1936
Bse3DI	GCAATG	2 cut(s)	1454, 1853
BseBI	CCWGG	2 cut(s)	360, 1892
BseDI	CCNNGG	4 cut(s)	45, 487, 1023, 1890
BseLI	CCNNNNNNNGG	4 cut(s)	132, 537, 1753, 1897
BseMI	GCAATG	2 cut(s)	1454, 1853
BseMII	CTCAG	3 cut(s)	849, 1104, 1910
BseNI	ACTGG	7 cut(s)	412, 618, 746, 1333, 1339, 1934, 1936
BseRI	GAGGAG	5 cut(s)	145, 148, 151, 154, 1852
BseSI	GKGCMC	1 cut(s)	830
BseXI	GCAGC	6 cut(s)	316, 583, 871, 1455, 1463, 1817
BseYI	CCCAGC	4 cut(s)	306, 466, 1238, 2114
BsgI	GTGCAG	1 cut(s)	2159
BshFI	GGCC	3 cut(s)	363, 471, 2150
BshNI	GGYRCC	1 cut(s)	4
BsiHKAI	GWGCWC	1 cut(s)	1214
BsiHKCI	CYCGRG	1 cut(s)	282
BsiSI	CCGG	2 cut(s)	47, 127
BslFI	GGGAC	5 cut(s)	139, 1419, 1596, 1981, 1990
BslI	CCNNNNNNNGG	4 cut(s)	132, 537, 1753, 1897
BsmAI	GTCTC	4 cut(s)	557, 562, 1761, 2105
BsmFI	GGGAC	5 cut(s)	139, 1419, 1596, 1981, 1990
BsnI	GGCC	3 cut(s)	363, 471, 2150
Bso31I	GGTCTC	1 cut(s)	2105
BsoBI	CYCGRG	1 cut(s)	282
Bsp1286I	GDGCHC	3 cut(s)	414, 830, 1214
Bsp1407I	TGTACA	3 cut(s)	392, 1703, 1884
Bsp19I	CCATGG	1 cut(s)	487
BspACI	CCGC	5 cut(s)	268, 304, 943, 1097, 1653
BspANI	GGCC	3 cut(s)	363, 471, 2150
BspCNI	CTCAG	3 cut(s)	850, 1105, 1909
BspHI	TCATGA	3 cut(s)	1513, 1686, 1924
BspLI	GGNNCC	5 cut(s)	6, 413, 649, 1029, 1934
BspMAI	CTGCAG	3 cut(s)	819, 1453, 1835
BspMI	ACCTGC	1 cut(s)	862
BspPI	GGATC	5 cut(s)	548, 736, 856, 1283, 1449
BspQI	GCTCTTC	1 cut(s)	407
BspT107I	GGYRCC	1 cut(s)	4
BspTI	CTTAAG	1 cut(s)	2003
BspTNI	GGTCTC	1 cut(s)	2105
BsrDI	GCAATG	2 cut(s)	1454, 1853
BsrGI	TGTACA	3 cut(s)	392, 1703, 1884
BsrI	ACTGG	7 cut(s)	412, 618, 746, 1333, 1339, 1934, 1936
BssECI	CCNNGG	4 cut(s)	45, 487, 1023, 1890
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	487
Bst2UI	CCWGG	2 cut(s)	360, 1892
Bst4CI	ACNGT	7 cut(s)	573, 629, 1073, 1216, 1373, 1495, 1536
Bst6I	CTCTTC	1 cut(s)	407
BstACI	GRCGYC	1 cut(s)	5
BstAFI	CTTAAG	1 cut(s)	2003
BstAPI	GCANNNNNTGC	1 cut(s)	1830
BstAUI	TGTACA	3 cut(s)	392, 1703, 1884
BstC8I	GCNNGC	2 cut(s)	547, 1107
BstDEI	CTNAG	3 cut(s)	858, 1113, 1896
BstDSI	CCRYGG	2 cut(s)	487, 1023
BstENI	CCTNNNNNAGG	1 cut(s)	1895
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstMAI	GTCTC	4 cut(s)	557, 562, 1761, 2105
BstMWI	GCNNNNNNNGC	4 cut(s)	1416, 1465, 1830, 1864
BstNI	CCWGG	2 cut(s)	360, 1892
BstNSI	RCATGY	1 cut(s)	1008
BstSCI	CCNGG	4 cut(s)	45, 125, 358, 1890
BstSFI	CTRYAG	8 cut(s)	815, 1164, 1396, 1449, 1532, 1729, 1831, 2087
BstSLI	GKGCMC	1 cut(s)	830
BstV1I	GCAGC	6 cut(s)	316, 583, 871, 1455, 1463, 1817
BstV2I	GAAGAC	2 cut(s)	1074, 1600
BstX2I	RGATCY	2 cut(s)	741, 1441
BstXI	CCANNNNNNTGG	1 cut(s)	430
BstYI	RGATCY	2 cut(s)	741, 1441
BsuRI	GGCC	3 cut(s)	363, 471, 2150
BtgI	CCRYGG	2 cut(s)	487, 1023
BtsI	GCAGTG	1 cut(s)	905
BtsIMutI	CAGTG	4 cut(s)	405, 905, 1369, 1491
BveI	ACCTGC	1 cut(s)	862
Cac8I	GCNNGC	2 cut(s)	547, 1107
CaiI	CAGNNNCTG	1 cut(s)	1830
CciI	TCATGA	3 cut(s)	1513, 1686, 1924
CfoI	GCGC	1 cut(s)	7
Cfr13I	GGNCC	2 cut(s)	362, 469
CseI	GACGC	1 cut(s)	1416
Csp6I	GTAC	7 cut(s)	393, 625, 812, 969, 1704, 1885, 1963
CviQI	GTAC	7 cut(s)	393, 625, 812, 969, 1704, 1885, 1963
DdeI	CTNAG	3 cut(s)	858, 1113, 1896
DinI	GGCGCC	1 cut(s)	6
DraI	TTTAAA	1 cut(s)	1945
Eam1104I	CTCTTC	1 cut(s)	407
EarI	CTCTTC	1 cut(s)	407
Eco130I	CCWWGG	1 cut(s)	487
Eco24I	GRGCYC	1 cut(s)	414
Eco31I	GGTCTC	1 cut(s)	2105
Eco32I	GATATC	1 cut(s)	1587
Eco57I	CTGAAG	1 cut(s)	1176
Eco88I	CYCGRG	1 cut(s)	282
EcoNI	CCTNNNNNAGG	1 cut(s)	1895
EcoRII	CCWGG	2 cut(s)	358, 1890
EcoRV	GATATC	1 cut(s)	1587
EcoT14I	CCWWGG	1 cut(s)	487
EcoT38I	GRGCYC	1 cut(s)	414
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	1 cut(s)	487
FalI	AAGNNNNNCTT	4 cut(s)	1394, 1426, 1779, 1811
FaqI	GGGAC	5 cut(s)	139, 1419, 1596, 1981, 1990
FbaI	TGATCA	1 cut(s)	1366
FblI	GTMKAC	1 cut(s)	584
Fnu4HI	GCNGC	8 cut(s)	304, 330, 597, 885, 1452, 1469, 1653, 1831
FriOI	GRGCYC	1 cut(s)	414
Fsp4HI	GCNGC	8 cut(s)	304, 330, 597, 885, 1452, 1469, 1653, 1831
FspBI	CTAG	1 cut(s)	789
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	8 cut(s)	304, 330, 597, 885, 1452, 1469, 1653, 1831
GsaI	CCCAGC	4 cut(s)	310, 470, 1242, 2118
GsuI	CTGGAG	2 cut(s)	53, 1228
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	3 cut(s)	363, 471, 2150
HapII	CCGG	2 cut(s)	47, 127
HgaI	GACGC	1 cut(s)	1416
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	1 cut(s)	5
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	1 cut(s)	1188
HindII	GTYRAC	1 cut(s)	1188
HindIII	AAGCTT	3 cut(s)	216, 1036, 1103
HpaII	CCGG	2 cut(s)	47, 127
HphI	GGTGA	4 cut(s)	41, 412, 843, 1637
Hpy166II	GTNNAC	6 cut(s)	395, 585, 1188, 1568, 1704, 1887
Hpy188I	TCNGA	9 cut(s)	100, 190, 706, 1086, 1114, 1318, 1608, 2032, 2109
Hpy8I	GTNNAC	6 cut(s)	395, 585, 1188, 1568, 1704, 1887
Hpy99I	CGWCG	3 cut(s)	173, 176, 2130
HpyAV	CCTTC	8 cut(s)	18, 92, 331, 425, 526, 1550, 1573, 1757
HpyCH4III	ACNGT	7 cut(s)	573, 629, 1073, 1216, 1373, 1495, 1536
HpyCH4IV	ACGT	2 cut(s)	1874, 2125
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1416, 1465, 1830, 1864
HpyF3I	CTNAG	3 cut(s)	858, 1113, 1896
HpySE526I	ACGT	2 cut(s)	1874, 2125
Hsp92I	GRCGYC	1 cut(s)	5
HspAI	GCGC	1 cut(s)	5
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	1366
LguI	GCTCTTC	1 cut(s)	407
LmnI	GCTCC	5 cut(s)	417, 1027, 1209, 1528, 1900
Lsp1109I	GCAGC	6 cut(s)	316, 583, 871, 1455, 1463, 1817
LweI	GCATC	8 cut(s)	104, 482, 583, 626, 772, 859, 2057, 2100
MaeI	CTAG	1 cut(s)	789
MaeII	ACGT	2 cut(s)	1874, 2125
MaeIII	GTNAC	3 cut(s)	385, 1159, 1247
MflI	RGATCY	2 cut(s)	741, 1441
MhlI	GDGCHC	3 cut(s)	414, 830, 1214
MluCI	AATT	8 cut(s)	104, 108, 240, 1193, 1421, 1547, 1719, 1761
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	1618, 1763
MmeI	TCCRAC	1 cut(s)	1460
MroXI	GAANNNNTTC	3 cut(s)	219, 950, 1746
MslI	CAYNNNNRTG	2 cut(s)	716, 2108
MspA1I	CMGCKG	1 cut(s)	306
MspCI	CTTAAG	1 cut(s)	2003
MspI	CCGG	2 cut(s)	47, 127
MspR9I	CCNGG	4 cut(s)	47, 127, 360, 1892
MvaI	CCWGG	2 cut(s)	360, 1892
MwoI	GCNNNNNNNGC	4 cut(s)	1416, 1465, 1830, 1864
NarI	GGCGCC	1 cut(s)	5
NciI	CCSGG	2 cut(s)	47, 127
NcoI	CCATGG	1 cut(s)	487
NlaIV	GGNNCC	5 cut(s)	6, 413, 649, 1029, 1934
NmuCI	GTSAC	1 cut(s)	1159
NspI	RCATGY	1 cut(s)	1008
PagI	TCATGA	3 cut(s)	1513, 1686, 1924
PaqCI	CACCTGC	1 cut(s)	862
PciSI	GCTCTTC	1 cut(s)	407
PdmI	GAANNNNTTC	3 cut(s)	219, 950, 1746
PfeI	GAWTC	8 cut(s)	35, 245, 317, 1135, 1510, 1628, 1783, 2027
PkrI	GCNGC	8 cut(s)	305, 331, 598, 886, 1453, 1470, 1654, 1832
PleI	GAGTC	2 cut(s)	1617, 1763
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	2 cut(s)	1617, 1763
PshBI	ATTAAT	2 cut(s)	107, 1760
Psp6I	CCWGG	2 cut(s)	358, 1890
PspFI	CCCAGC	4 cut(s)	306, 466, 1238, 2114
PspGI	CCWGG	2 cut(s)	358, 1890
PspN4I	GGNNCC	5 cut(s)	6, 413, 649, 1029, 1934
PspPI	GGNCC	2 cut(s)	362, 469
PsrI	GAACNNNNNNTAC	2 cut(s)	1379, 1411
PstI	CTGCAG	3 cut(s)	819, 1453, 1835
PstNI	CAGNNNCTG	1 cut(s)	1830
PsuI	RGATCY	2 cut(s)	741, 1441
RsaI	GTAC	7 cut(s)	394, 626, 813, 970, 1705, 1886, 1964
RsaNI	GTAC	7 cut(s)	393, 625, 812, 969, 1704, 1885, 1963
RseI	CAYNNNNRTG	2 cut(s)	716, 2108
SapI	GCTCTTC	1 cut(s)	407
SatI	GCNGC	8 cut(s)	304, 330, 597, 885, 1452, 1469, 1653, 1831
Sau96I	GGNCC	2 cut(s)	362, 469
SchI	GAGTC	2 cut(s)	1618, 1763
ScrFI	CCNGG	4 cut(s)	47, 127, 360, 1892
SduI	GDGCHC	3 cut(s)	414, 830, 1214
SfaNI	GCATC	8 cut(s)	104, 482, 583, 626, 772, 859, 2057, 2100
SfcI	CTRYAG	8 cut(s)	815, 1164, 1396, 1449, 1532, 1729, 1831, 2087
SfoI	GGCGCC	1 cut(s)	6
SmiMI	CAYNNNNRTG	2 cut(s)	716, 2108
SmlI	CTYRAG	4 cut(s)	1379, 1390, 1505, 2003
SmoI	CTYRAG	4 cut(s)	1379, 1390, 1505, 2003
Sse9I	AATT	8 cut(s)	104, 108, 240, 1193, 1421, 1547, 1719, 1761
SsiI	CCGC	5 cut(s)	268, 304, 943, 1097, 1653
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	1542
SspMI	CTAG	1 cut(s)	789
StyD4I	CCNGG	4 cut(s)	45, 125, 358, 1890
StyI	CCWWGG	1 cut(s)	487
TaaI	ACNGT	7 cut(s)	573, 629, 1073, 1216, 1373, 1495, 1536
TaiI	ACGT	2 cut(s)	1877, 2128
TaqI	TCGA	4 cut(s)	291, 452, 519, 1258
TaqII	GACCGA	1 cut(s)	182
TasI	AATT	8 cut(s)	104, 108, 240, 1193, 1421, 1547, 1719, 1761
TatI	WGTACW	5 cut(s)	392, 811, 1703, 1884, 1962
TauI	GCSGC	2 cut(s)	306, 1655
TfiI	GAWTC	8 cut(s)	35, 245, 317, 1135, 1510, 1628, 1783, 2027
TscAI	CASTG	4 cut(s)	412, 905, 1376, 1498
TseFI	GTSAC	1 cut(s)	1159
TseI	GCWGC	6 cut(s)	329, 596, 884, 1451, 1468, 1830
Tsp45I	GTSAC	1 cut(s)	1159
TspGWI	ACGGA	2 cut(s)	1040, 1789
TspRI	CASTG	4 cut(s)	412, 905, 1376, 1498
Vha464I	CTTAAG	1 cut(s)	2003
VspI	ATTAAT	2 cut(s)	107, 1760
XagI	CCTNNNNNAGG	1 cut(s)	1895
XceI	RCATGY	1 cut(s)	1008
XmiI	GTMKAC	1 cut(s)	584
XmnI	GAANNNNTTC	3 cut(s)	219, 950, 1746
XspI	CTAG	1 cut(s)	789

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.