Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001837

Physical Location & Seq

Genomic Coordinates Reverse (-)

3099017 .. 3100414

Gene Structure 1398 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG044600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGCGTGGTGGTGATAGAAACCCTGCCACCAAGAGAAAATACAGTAAAATATCAGCACCAACTGATTCCTCTGATGGCTTAAGAAGATCAAAACGATTAGCATCGTCAACCAATATTTATGATATCCCAAAGGAATTATTAGTTGAAATCCTTTGTCGGCTACCTTGCGCTAAATCTGTTTATAGATGCAAGAGTGTGTCAAAGAGTTGGCGCTCACTCACGTCGGATCCTTATTTTGTCGGCCGTTTATTGTGGCTCCAAAGAGATTACCAAACCCTAATACCTGGTACTATTATAAACCAGCTTGGGGATGAACTCCTTACCACAGACTCGTTTGCAAGATTCAGGAGTTTTTTCGAACTCAAGAAGGACAAATTACTAGTGCTAGCTACATGGAACGACTTGGTTCTCTGTGAAGATGACGGTGATTATTACATCTGCAATCCAAGGACCATGCAACTGGTTAGTCTTCCTCCGATCAATCAATGCCGTTGCAGTTGGGGATATAGGCCTGCTGTGGGATTCATCTGTGAGCCATACTATAAGGAAGAAGAAGACAGACCCGCCGACAATAGTGATCAAAAAGAAGAAGAAGAAGAAAGGAAGCAGGTAATCAAAATTGATGCCGAGTATAAGTGCAAGGTTGTGAGAATTCTTCATCCTGATGACAAGGAAAAACTTTATTTCGAATTCAAGATTCAGGTCTTCTCTAGTGAGATTGGTGAATGGAGAGAATCACTAGTATCATGTCCACGCGGCTTTATTTATTCTAGACTCCAGTCCATATTTGGCTTTGCTACCAATGGAATGCTATATTGGAATGCTAGGAATGGTGATCTGCTTGGGCTGGGACCTTTGATGATCAACAACAAGAGTACTAGTACTACTGCCAATGGTGATTCGGTCTGTCAATTTCATGTTATTAAACTTGTTCGGCAGGAACATCAAGATGAAGATTTACATTCTTCATTTTACTACCTTCAGGGGCACCGTGGACGTCTGCAGTTGGTGCAGATGATGGAGAATGAGGACCCCTCTGGAGCTAGGCTATCGGTTTGGGAGTTGAAAAAAGAAGAACTAGAACAAATGGCAGTACAAGGGGGTGGAGAACTGGGTCAGAAACACCGGAAAACTTATAATATAATGGATAAAGTATATTATGATATACTTACTTCGCTGGAGTATATGGGTTCTGATCCAAATGATTTGGATACATGTTTTGTGTCTCTAACAGATTATGATCATAGAGAACCTGTCATTTACAAGTGCAACATTCACACAGGAGAATGGTCCAAGATGGAGCTCGAGGAAACATTTTCTGGGCAAGCATTACAAGTTATGCTCCCATGGTGGCCTACACCAGTTCCTATAATTTCTGTACGTTCCCATGCCGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L4

Protein Analysis

465

Amino Acids

53.84

Weight (kDa)

5.75

Isoelectric Point (pI)

43.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	40 - 79	3.7e-08	F-box-like
F-box	PF00646	40 - 79	7.9e-06	F-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001837)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02011 FvH4_3g43682 FvH4_3g43730 FvH4_3g43732 FvH4_3g43751 FvH4_3g43770 FvH4_3g44582 FvH4_4g35052
malus_domestica	MD04G1181000.v1.1
pyrus_communis	pycom02g00740
rosa_chinensis	RchiOBHm_Chr2g0089331
rosa_laevigata	RLG00000005816 RLG00000016017 RLG00000016028 RLG00000016029 RLG00000037001
rosa_multiflora	Rmu_sc0000197.1_g000009 Rmu_sc0000197.1_g000011 Rmu_sc0002008.1_g000009 Rmu_sc0004031.1_g000020 Rmu_sc0008322.1_g000011 Rmu_sc0008322.1_g000014 Rmu_sc0017035.1_g000003 Rmu_sc0020026.1_g000001
rosa_roxburghii	Rroxscaffold_1G00001150 Rroxscaffold_2G00151930 Rroxscaffold_2G00152070 Rroxscaffold_3G00244680
rosa_rugosa	Rorug01G0488800 Rorug01G0489200 Rorug01G0489300 Rorug02G0000900 Rorug02G0000900 Rorug04G0354300 Rorug05G0483000
rosa_samantha	Rh2AG046000 Rh2BG044600 Rh2CG046400 Rh2DG044300 Rh2DG044400 Rh2DG044600 Rh2DG045000 Rh2DG045900 Rh2DG046000 Rh5AG531200 Rh5DG568500
rosa_wichuraiana	Rw2G003660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	296, 1137
AatII	GACGTC	1 cut(s)	1000
Acc36I	ACCTGC	1 cut(s)	598
AccB1I	GGYRCC	1 cut(s)	987
AccII	CGCG	1 cut(s)	756
AciI	CCGC	2 cut(s)	564, 756
AclWI	GGATC	3 cut(s)	221, 234, 1190
AcoI	YGGCCR	1 cut(s)	241
AcsI	RAATTY	2 cut(s)	651, 689
AcuI	CTGAAG	1 cut(s)	965
AcyI	GRCGYC	1 cut(s)	997
AfaI	GTAC	5 cut(s)	289, 877, 883, 1095, 1380
AfiI	CCNNNNNNNGG	2 cut(s)	307, 518
AflII	CTTAAG	1 cut(s)	79
AflIII	ACRYGT	1 cut(s)	1214
AgsI	TTSAA	3 cut(s)	146, 694, 1066
AhlI	ACTAGT	3 cut(s)	379, 739, 878
AjiI	CACGTC	1 cut(s)	222
AjnI	CCWGG	1 cut(s)	283
AjuI	GAANNNNNNNTTGG	2 cut(s)	799, 831
AluBI	AGCT	4 cut(s)	304, 389, 1043, 1303
AluI	AGCT	4 cut(s)	304, 389, 1043, 1303
Alw21I	GWGCWC	1 cut(s)	1305
Alw26I	GTCTC	1 cut(s)	1230
AlwI	GGATC	3 cut(s)	221, 234, 1190
Ama87I	CYCGRG	1 cut(s)	1304
AoxI	GGCC	3 cut(s)	241, 509, 1352
ApoI	RAATTY	2 cut(s)	651, 689
AspLEI	GCGC	2 cut(s)	170, 213
AspS9I	GGNCC	4 cut(s)	450, 851, 1030, 1290
AsuHPI	GGTGA	5 cut(s)	23, 437, 734, 845, 908
AsuII	TTCGAA	2 cut(s)	357, 687
AsuNHI	GCTAGC	1 cut(s)	385
AvaI	CYCGRG	1 cut(s)	1304
AvaII	GGWCC	4 cut(s)	450, 851, 1030, 1290
BaeGI	GKGCMC	1 cut(s)	990
BamHI	GGATCC	1 cut(s)	226
BanI	GGYRCC	1 cut(s)	987
BanII	GRGCYC	1 cut(s)	1305
BbsI	GAAGAC	3 cut(s)	461, 561, 697
Bbv12I	GWGCWC	1 cut(s)	1305
BccI	CCATC	3 cut(s)	68, 1012, 1291
BceAI	ACGGC	2 cut(s)	228, 474
BciT130I	CCWGG	1 cut(s)	285
BciVI	GTATCC	1 cut(s)	1204
BclI	TGATCA	3 cut(s)	577, 861, 1240
BcoDI	GTCTC	1 cut(s)	1230
BcuI	ACTAGT	3 cut(s)	379, 739, 878
BfaI	CTAG	9 cut(s)	380, 386, 711, 740, 771, 825, 879, 1044, 1079
BfmI	CTRYAG	1 cut(s)	1001
BfoI	RGCGCY	1 cut(s)	214
BfrI	CTTAAG	1 cut(s)	79
BfuAI	ACCTGC	1 cut(s)	598
BfuI	GTATCC	1 cut(s)	1204
BisI	GCNGC	1 cut(s)	757
BlsI	GCNGC	1 cut(s)	758
BmcAI	AGTACT	2 cut(s)	877, 883
Bme1390I	CCNGG	1 cut(s)	285
Bme18I	GGWCC	4 cut(s)	450, 851, 1030, 1290
BmeT110I	CYCGRG	1 cut(s)	1304
BmgBI	CACGTC	1 cut(s)	222
BmgT120I	GGNCC	4 cut(s)	450, 851, 1030, 1290
BmiI	GGNNCC	5 cut(s)	228, 257, 852, 989, 1032
BmrFI	CCNGG	1 cut(s)	285
BmrI	ACTGGG	1 cut(s)	1121
BmsI	GCATC	3 cut(s)	110, 176, 613
BmtI	GCTAGC	1 cut(s)	389
BmuI	ACTGGG	1 cut(s)	1121
BoxI	GACNNNNGTC	1 cut(s)	778
BpiI	GAAGAC	3 cut(s)	461, 561, 697
BplI	GAGNNNNNCTC	2 cut(s)	1019, 1051
BpmI	CTGGAG	3 cut(s)	761, 1059, 1199
Bpu14I	TTCGAA	2 cut(s)	357, 687
BpuEI	CTTGAG	1 cut(s)	347
BsaBI	GATNNNNATC	2 cut(s)	100, 1239
BsaHI	GRCGYC	1 cut(s)	997
BsaJI	CCNNGG	3 cut(s)	446, 991, 1346
BsaWI	WCCGGW	1 cut(s)	1125
Bsc4I	CCNNNNNNNGG	2 cut(s)	307, 518
Bse1I	ACTGG	4 cut(s)	465, 778, 1116, 1361
Bse8I	GATNNNNATC	2 cut(s)	100, 1239
BseBI	CCWGG	1 cut(s)	285
BseDI	CCNNGG	3 cut(s)	446, 991, 1346
BseGI	GGATG	2 cut(s)	316, 658
BseJI	GATNNNNATC	2 cut(s)	100, 1239
BseLI	CCNNNNNNNGG	2 cut(s)	307, 518
BseNI	ACTGG	4 cut(s)	465, 778, 1116, 1361
BseSI	GKGCMC	1 cut(s)	990
BseX3I	CGGCCG	1 cut(s)	241
BseYI	CCCAGC	1 cut(s)	847
BsgI	GTGCAG	1 cut(s)	1031
Bsh1236I	CGCG	1 cut(s)	756
Bsh1285I	CGRYCG	1 cut(s)	244
BshFI	GGCC	3 cut(s)	243, 511, 1354
BshNI	GGYRCC	1 cut(s)	987
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	1 cut(s)	1305
BsiHKCI	CYCGRG	1 cut(s)	1304
BsiSI	CCGG	1 cut(s)	1126
BslFI	GGGAC	1 cut(s)	864
BslI	CCNNNNNNNGG	2 cut(s)	307, 518
BsmAI	GTCTC	1 cut(s)	1230
BsmFI	GGGAC	1 cut(s)	864
BsmI	GAATGC	2 cut(s)	813, 826
BsnI	GGCC	3 cut(s)	243, 511, 1354
BsoBI	CYCGRG	1 cut(s)	1304
Bsp119I	TTCGAA	2 cut(s)	357, 687
Bsp1286I	GDGCHC	2 cut(s)	990, 1305
Bsp143I	GATC	8 cut(s)	86, 226, 477, 577, 835, 861, 1195, 1240
Bsp19I	CCATGG	1 cut(s)	1346
BspACI	CCGC	2 cut(s)	564, 756
BspANI	GGCC	3 cut(s)	243, 511, 1354
BspFNI	CGCG	1 cut(s)	756
BspLI	GGNNCC	5 cut(s)	228, 257, 852, 989, 1032
BspMAI	CTGCAG	1 cut(s)	1005
BspMI	ACCTGC	1 cut(s)	598
BspOI	GCTAGC	1 cut(s)	389
BspPI	GGATC	3 cut(s)	221, 234, 1190
BspT104I	TTCGAA	2 cut(s)	357, 687
BspT107I	GGYRCC	1 cut(s)	987
BspTI	CTTAAG	1 cut(s)	79
BsrI	ACTGG	4 cut(s)	465, 778, 1116, 1361
BssECI	CCNNGG	3 cut(s)	446, 991, 1346
BssMI	GATC	8 cut(s)	86, 226, 477, 577, 835, 861, 1195, 1240
BssNI	GRCGYC	1 cut(s)	997
BssT1I	CCWWGG	2 cut(s)	446, 1346
Bst2UI	CCWGG	1 cut(s)	285
Bst4CI	ACNGT	3 cut(s)	44, 425, 992
BstACI	GRCGYC	1 cut(s)	997
BstAFI	CTTAAG	1 cut(s)	79
BstAPI	GCANNNNNTGC	1 cut(s)	1009
BstBI	TTCGAA	2 cut(s)	357, 687
BstC8I	GCNNGC	3 cut(s)	387, 513, 1326
BstDSI	CCRYGG	2 cut(s)	991, 1346
BstF5I	GGATG	2 cut(s)	316, 658
BstFNI	CGCG	1 cut(s)	756
BstH2I	RGCGCY	1 cut(s)	214
BstHHI	GCGC	2 cut(s)	170, 213
BstKTI	GATC	8 cut(s)	89, 229, 480, 580, 838, 864, 1198, 1243
BstMAI	GTCTC	1 cut(s)	1230
BstMBI	GATC	8 cut(s)	86, 226, 477, 577, 835, 861, 1195, 1240
BstMCI	CGRYCG	1 cut(s)	244
BstMWI	GCNNNNNNNGC	1 cut(s)	1009
BstNI	CCWGG	1 cut(s)	285
BstNSI	RCATGY	1 cut(s)	1218
BstPAI	GACNNNNGTC	1 cut(s)	778
BstSCI	CCNGG	1 cut(s)	283
BstSFI	CTRYAG	1 cut(s)	1001
BstSLI	GKGCMC	1 cut(s)	990
BstUI	CGCG	1 cut(s)	756
BstV2I	GAAGAC	3 cut(s)	461, 561, 697
BstX2I	RGATCY	1 cut(s)	226
BstXI	CCANNNNNNTGG	1 cut(s)	460
BstYI	RGATCY	1 cut(s)	226
BstZI	CGGCCG	1 cut(s)	241
BsuI	GTATCC	1 cut(s)	1204
BsuRI	GGCC	3 cut(s)	243, 511, 1354
BtgI	CCRYGG	2 cut(s)	991, 1346
BtrI	CACGTC	1 cut(s)	222
BtsCI	GGATG	2 cut(s)	316, 658
BveI	ACCTGC	1 cut(s)	598
Cac8I	GCNNGC	3 cut(s)	387, 513, 1326
CfoI	GCGC	2 cut(s)	170, 213
Cfr13I	GGNCC	4 cut(s)	450, 851, 1030, 1290
CsiI	ACCWGGT	1 cut(s)	283
Csp6I	GTAC	5 cut(s)	288, 876, 882, 1094, 1379
CviAII	CATG	7 cut(s)	393, 454, 747, 917, 1215, 1347, 1388
CviQI	GTAC	5 cut(s)	288, 876, 882, 1094, 1379
DpnI	GATC	8 cut(s)	88, 228, 479, 579, 837, 863, 1197, 1242
DpnII	GATC	8 cut(s)	86, 226, 477, 577, 835, 861, 1195, 1240
EaeI	YGGCCR	1 cut(s)	241
EagI	CGGCCG	1 cut(s)	241
Ecl136II	GAGCTC	1 cut(s)	1303
EclXI	CGGCCG	1 cut(s)	241
Eco130I	CCWWGG	2 cut(s)	446, 1346
Eco147I	AGGCCT	1 cut(s)	511
Eco24I	GRGCYC	1 cut(s)	1305
Eco32I	GATATC	1 cut(s)	124
Eco47I	GGWCC	4 cut(s)	450, 851, 1030, 1290
Eco52I	CGGCCG	1 cut(s)	241
Eco53kI	GAGCTC	1 cut(s)	1303
Eco57I	CTGAAG	1 cut(s)	965
Eco88I	CYCGRG	1 cut(s)	1304
EcoICRI	GAGCTC	1 cut(s)	1303
EcoO109I	RGGNCCY	2 cut(s)	851, 1030
EcoRI	GAATTC	2 cut(s)	651, 689
EcoRII	CCWGG	1 cut(s)	283
EcoRV	GATATC	1 cut(s)	124
EcoT14I	CCWWGG	2 cut(s)	446, 1346
EcoT38I	GRGCYC	1 cut(s)	1305
ErhI	CCWWGG	2 cut(s)	446, 1346
FaeI	CATG	7 cut(s)	396, 457, 750, 920, 1218, 1350, 1391
FaqI	GGGAC	1 cut(s)	864
FatI	CATG	7 cut(s)	392, 453, 746, 916, 1214, 1346, 1387
FauI	CCCGC	1 cut(s)	571
FbaI	TGATCA	3 cut(s)	577, 861, 1240
Fnu4HI	GCNGC	1 cut(s)	757
FokI	GGATG	2 cut(s)	323, 645
FriOI	GRGCYC	1 cut(s)	1305
Fsp4HI	GCNGC	1 cut(s)	757
FspBI	CTAG	9 cut(s)	380, 386, 711, 740, 771, 825, 879, 1044, 1079
GlaI	GCGC	2 cut(s)	169, 212
GluI	GCNGC	1 cut(s)	757
GsaI	CCCAGC	1 cut(s)	851
GsuI	CTGGAG	3 cut(s)	761, 1059, 1199
HaeII	RGCGCY	1 cut(s)	214
HaeIII	GGCC	3 cut(s)	243, 511, 1354
HapII	CCGG	1 cut(s)	1126
HhaI	GCGC	2 cut(s)	170, 213
Hin1I	GRCGYC	1 cut(s)	997
Hin1II	CATG	7 cut(s)	396, 457, 750, 920, 1218, 1350, 1391
Hin6I	GCGC	2 cut(s)	168, 211
HinP1I	GCGC	2 cut(s)	168, 211
HincII	GTYRAC	1 cut(s)	108
HindII	GTYRAC	1 cut(s)	108
HinfI	GANTC	8 cut(s)	65, 329, 342, 522, 697, 734, 774, 899
HpaII	CCGG	1 cut(s)	1126
HphI	GGTGA	5 cut(s)	23, 437, 734, 845, 908
Hpy166II	GTNNAC	3 cut(s)	108, 752, 995
Hpy188I	TCNGA	5 cut(s)	73, 226, 477, 1119, 1195
Hpy188III	TCNNGA	7 cut(s)	346, 364, 662, 694, 771, 947, 1038
Hpy8I	GTNNAC	3 cut(s)	108, 752, 995
Hpy99I	CGWCG	1 cut(s)	226
HpyAV	CCTTC	2 cut(s)	361, 989
HpyCH4III	ACNGT	3 cut(s)	44, 425, 992
HpyCH4IV	ACGT	3 cut(s)	221, 997, 1381
HpyCH4V	TGCA	9 cut(s)	189, 338, 441, 457, 495, 639, 1003, 1012, 1269
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1009
HpySE526I	ACGT	3 cut(s)	221, 997, 1381
Hsp92I	GRCGYC	1 cut(s)	997
Hsp92II	CATG	7 cut(s)	396, 457, 750, 920, 1218, 1350, 1391
HspAI	GCGC	2 cut(s)	168, 211
Ksp22I	TGATCA	3 cut(s)	577, 861, 1240
Kzo9I	GATC	8 cut(s)	86, 226, 477, 577, 835, 861, 1195, 1240
LmnI	GCTCC	4 cut(s)	261, 1040, 1300, 1347
LweI	GCATC	3 cut(s)	110, 176, 613
MabI	ACCWGGT	1 cut(s)	283
MaeI	CTAG	9 cut(s)	380, 386, 711, 740, 771, 825, 879, 1044, 1079
MaeII	ACGT	3 cut(s)	221, 997, 1381
MalI	GATC	8 cut(s)	88, 228, 479, 579, 837, 863, 1197, 1242
MboI	GATC	8 cut(s)	86, 226, 477, 577, 835, 861, 1195, 1240
MflI	RGATCY	1 cut(s)	226
MhlI	GDGCHC	2 cut(s)	990, 1305
MluCI	AATT	7 cut(s)	134, 374, 618, 651, 689, 911, 1371
MlyI	GAGTC	2 cut(s)	323, 768
MmeI	TCCRAC	1 cut(s)	204
MnlI	CCTC	5 cut(s)	79, 483, 1021, 1045, 1300
MseI	TTAA	2 cut(s)	80, 924
MslI	CAYNNNNRTG	2 cut(s)	663, 948
MspCI	CTTAAG	1 cut(s)	79
MspI	CCGG	1 cut(s)	1126
MspR9I	CCNGG	1 cut(s)	285
Mva1269I	GAATGC	2 cut(s)	813, 826
MvaI	CCWGG	1 cut(s)	285
MvnI	CGCG	1 cut(s)	756
MwoI	GCNNNNNNNGC	1 cut(s)	1009
NcoI	CCATGG	1 cut(s)	1346
NdeII	GATC	8 cut(s)	86, 226, 477, 577, 835, 861, 1195, 1240
NheI	GCTAGC	1 cut(s)	385
NlaIII	CATG	7 cut(s)	396, 457, 750, 920, 1218, 1350, 1391
NlaIV	GGNNCC	5 cut(s)	228, 257, 852, 989, 1032
NmeAIII	GCCGAG	1 cut(s)	652
NspI	RCATGY	1 cut(s)	1218
NspV	TTCGAA	2 cut(s)	357, 687
PaeR7I	CTCGAG	1 cut(s)	1304
PceI	AGGCCT	1 cut(s)	511
PciI	ACATGT	1 cut(s)	1214
PctI	GAATGC	2 cut(s)	813, 826
PfeI	GAWTC	6 cut(s)	65, 342, 522, 697, 734, 899
PkrI	GCNGC	1 cut(s)	758
PleI	GAGTC	2 cut(s)	323, 768
PpsI	GAGTC	2 cut(s)	323, 768
PpuMI	RGGWCCY	2 cut(s)	851, 1030
PscI	ACATGT	1 cut(s)	1214
PshAI	GACNNNNGTC	1 cut(s)	778
PsiI	TTATAA	2 cut(s)	296, 1137
Psp124BI	GAGCTC	1 cut(s)	1305
Psp5II	RGGWCCY	2 cut(s)	851, 1030
Psp6I	CCWGG	1 cut(s)	283
PspFI	CCCAGC	1 cut(s)	847
PspGI	CCWGG	1 cut(s)	283
PspN4I	GGNNCC	5 cut(s)	228, 257, 852, 989, 1032
PspPI	GGNCC	4 cut(s)	450, 851, 1030, 1290
PspPPI	RGGWCCY	2 cut(s)	851, 1030
PspXI	VCTCGAGB	1 cut(s)	1304
PstI	CTGCAG	1 cut(s)	1005
PsuI	RGATCY	1 cut(s)	226
RsaI	GTAC	5 cut(s)	289, 877, 883, 1095, 1380
RsaNI	GTAC	5 cut(s)	288, 876, 882, 1094, 1379
RseI	CAYNNNNRTG	2 cut(s)	663, 948
SacI	GAGCTC	1 cut(s)	1305
SaqAI	TTAA	2 cut(s)	80, 924
SatI	GCNGC	1 cut(s)	757
Sau3AI	GATC	8 cut(s)	86, 226, 477, 577, 835, 861, 1195, 1240
Sau96I	GGNCC	4 cut(s)	450, 851, 1030, 1290
ScaI	AGTACT	2 cut(s)	877, 883
SchI	GAGTC	2 cut(s)	323, 768
ScrFI	CCNGG	1 cut(s)	285
SduI	GDGCHC	2 cut(s)	990, 1305
SexAI	ACCWGGT	1 cut(s)	283
SfaNI	GCATC	3 cut(s)	110, 176, 613
SfcI	CTRYAG	1 cut(s)	1001
Sfr274I	CTCGAG	1 cut(s)	1304
SfuI	TTCGAA	2 cut(s)	357, 687
SinI	GGWCC	4 cut(s)	450, 851, 1030, 1290
SlaI	CTCGAG	1 cut(s)	1304
SmiMI	CAYNNNNRTG	2 cut(s)	663, 948
SmlI	CTYRAG	3 cut(s)	79, 362, 1304
SmoI	CTYRAG	3 cut(s)	79, 362, 1304
SpeI	ACTAGT	3 cut(s)	379, 739, 878
Sse9I	AATT	7 cut(s)	134, 374, 618, 651, 689, 911, 1371
SseBI	AGGCCT	1 cut(s)	511
SsiI	CCGC	2 cut(s)	564, 756
SspI	AATATT	1 cut(s)	115
SspMI	CTAG	9 cut(s)	380, 386, 711, 740, 771, 825, 879, 1044, 1079
SstI	GAGCTC	1 cut(s)	1305
StuI	AGGCCT	1 cut(s)	511
StyD4I	CCNGG	1 cut(s)	283
StyI	CCWWGG	2 cut(s)	446, 1346
TaaI	ACNGT	3 cut(s)	44, 425, 992
TaiI	ACGT	3 cut(s)	224, 1000, 1384
TaqI	TCGA	3 cut(s)	357, 687, 1305
TaqII	GACCGA	1 cut(s)	892
TasI	AATT	7 cut(s)	134, 374, 618, 651, 689, 911, 1371
TatI	WGTACW	3 cut(s)	875, 881, 1093
TauI	GCSGC	1 cut(s)	759
TfiI	GAWTC	6 cut(s)	65, 342, 522, 697, 734, 899
Tru1I	TTAA	2 cut(s)	80, 924
Tru9I	TTAA	2 cut(s)	80, 924
TspDTI	ATGAA	6 cut(s)	327, 514, 647, 905, 957, 966
Vha464I	CTTAAG	1 cut(s)	79
VpaK11BI	GGWCC	4 cut(s)	450, 851, 1030, 1290
XapI	RAATTY	2 cut(s)	651, 689
XbaI	TCTAGA	1 cut(s)	770
XceI	RCATGY	1 cut(s)	1218
XcmI	CCANNNNNNNNNTGG	1 cut(s)	785
XhoI	CTCGAG	1 cut(s)	1304
XspI	CTAG	9 cut(s)	380, 386, 711, 740, 771, 825, 879, 1044, 1079
ZraI	GACGTC	1 cut(s)	998
ZrmI	AGTACT	2 cut(s)	877, 883

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.