Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0001837

Physical Location & Seq

Genomic Coordinates Forward (+)

3063163 .. 3064557

Gene Structure 1395 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG044300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGCGTGGTGGTGATAGAAACCCTGCCACCAAGAGAAAATACAGTAAAATATCAGCACCAACTGATTCCTCTGATGGCTTAAGAAGATCAAAACGATTAGCATCGTCAACCAATATTTATGATATCCCAAAGGAATTATTAGTTGAAATCCTTTGTCGGCTACCTTGCGCTAAATCTGTTTATAGATGCAAGAGTGTGTCAAAGAGTTGGCGCTCACTCACGTCGGATCCTTATTTTGTCGGCCGTTTATTGTGGCTCCAAAGAGATTACCAAACCCTAATACCTGGTACTATTATAAACCAGCTTGGGGATGAACTCCTTACCACAGACTCGTTTGCAAGATTCAGGAGTTTTTTCGAACTCAAGAAGAACAAATTACTAGTGCTAGCTACATGGAACGACTTGGTTCTCTGTGAAGATGACGGTGATTATTACATCTGCAATCCAAGGACCATGCAACTGGTTAGTCTTCCTCCGATCAATCAAGGCCGTTGCAGTTGGGGATATAGGCCTGCTGTGGGATTCATCTGTGAGCCATACTATAAGGAAGAAGAAGACAGACCCGCCGACAATAGTGATCAAAAAGAAGAAGAAGAAGAAAGGAAGGTAATCAAAATTGATGCCGAGTATAAGTGCAAGGTTGTGAGAATTCTTCATCCTGATGACAAGGAAAAACTTTATTTCGAATTCAAGATTCAGGTCTTCTCTAGTGAGATTGGTGAATGGAGAGAATCACTAGTATCATGTCCACGCGGCTTTATTTATTCTAGACTCCAGTCCATATTTGGCTTTGCTACCAATGGAATGCTATATTGGAATGCTAGGAATGGTGATCTGCTTGGGCTGGGACCTTTGATGATCAACAACAAGAGTACTAGTACTACTGCCAATGGTGATTCGGTCTGTCAATTTCATGTTATTAAACTTGTACGGCAGGAACATCAAGATGAAGATTTATATTCTTCATTTTACTACCTTCAGGGGCACCGTGGACGTCTGCAGTTGGTGCAGATGATGGAGAATGAGGACCCCTCTGGAGCTAGTCTATCGGTTTGGGAGTTGAAAAAAGAAGAACTAGAACAAATGGCAGTACAAGGGGGTGGAGAACTGGGTCAGAAACACCGGAAAACTTATAATATAATGGATAAAGTATATTATGATATACTTACTTCGCTGGAGTATATGGGTTCTGATCCAAATGATTTGGATACATGTTTTGTGTCTCTAACAGATCATGATCATAGAGAACCTGTCATTTACAAGTGCAACATTCACACAGGAGAATGGTCCAAGATGGAGCTCGAGGAAACATTTTCTGGGCAAGCATTACAAGTTATGCTCCCATGGTGGCCTACACCAGTTCCTATAATTTCTGTACGTTCCCATGCCGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L4

Protein Analysis

464

Amino Acids

53.59

Weight (kDa)

5.75

Isoelectric Point (pI)

43.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	40 - 79	3.7e-08	F-box-like
F-box	PF00646	40 - 79	7.8e-06	F-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001837)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02011 FvH4_3g43682 FvH4_3g43730 FvH4_3g43732 FvH4_3g43751 FvH4_3g43770 FvH4_3g44582 FvH4_4g35052
malus_domestica	MD04G1181000.v1.1
pyrus_communis	pycom02g00740
rosa_chinensis	RchiOBHm_Chr2g0089331
rosa_laevigata	RLG00000005816 RLG00000016017 RLG00000016028 RLG00000016029 RLG00000037001
rosa_multiflora	Rmu_sc0000197.1_g000009 Rmu_sc0000197.1_g000011 Rmu_sc0002008.1_g000009 Rmu_sc0004031.1_g000020 Rmu_sc0008322.1_g000011 Rmu_sc0008322.1_g000014 Rmu_sc0017035.1_g000003 Rmu_sc0020026.1_g000001
rosa_roxburghii	Rroxscaffold_1G00001150 Rroxscaffold_2G00151930 Rroxscaffold_2G00152070 Rroxscaffold_3G00244680
rosa_rugosa	Rorug01G0488800 Rorug01G0489200 Rorug01G0489300 Rorug02G0000900 Rorug02G0000900 Rorug04G0354300 Rorug05G0483000
rosa_samantha	Rh2AG046000 Rh2BG044600 Rh2CG046400 Rh2DG044300 Rh2DG044400 Rh2DG044600 Rh2DG045000 Rh2DG045900 Rh2DG046000 Rh5AG531200 Rh5DG568500
rosa_wichuraiana	Rw2G003660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	296, 1134
AatII	GACGTC	1 cut(s)	997
AccB1I	GGYRCC	1 cut(s)	984
AccII	CGCG	1 cut(s)	753
AciI	CCGC	2 cut(s)	564, 753
AclWI	GGATC	3 cut(s)	221, 234, 1187
AcoI	YGGCCR	1 cut(s)	241
AcsI	RAATTY	2 cut(s)	648, 686
AcuI	CTGAAG	1 cut(s)	962
AcyI	GRCGYC	1 cut(s)	994
AfaI	GTAC	6 cut(s)	289, 874, 880, 930, 1092, 1377
AfiI	CCNNNNNNNGG	2 cut(s)	307, 518
AflII	CTTAAG	1 cut(s)	79
AflIII	ACRYGT	1 cut(s)	1211
AgsI	TTSAA	3 cut(s)	146, 691, 1063
AhlI	ACTAGT	3 cut(s)	379, 736, 875
AjiI	CACGTC	1 cut(s)	222
AjnI	CCWGG	1 cut(s)	283
AjuI	GAANNNNNNNTTGG	2 cut(s)	796, 828
AluBI	AGCT	4 cut(s)	304, 389, 1040, 1300
AluI	AGCT	4 cut(s)	304, 389, 1040, 1300
Alw21I	GWGCWC	1 cut(s)	1302
Alw26I	GTCTC	1 cut(s)	1227
AlwI	GGATC	3 cut(s)	221, 234, 1187
Ama87I	CYCGRG	1 cut(s)	1301
AoxI	GGCC	4 cut(s)	241, 487, 509, 1349
ApoI	RAATTY	2 cut(s)	648, 686
AspLEI	GCGC	2 cut(s)	170, 213
AspS9I	GGNCC	4 cut(s)	450, 848, 1027, 1287
AsuHPI	GGTGA	5 cut(s)	23, 437, 731, 842, 905
AsuII	TTCGAA	2 cut(s)	357, 684
AsuNHI	GCTAGC	1 cut(s)	385
AvaI	CYCGRG	1 cut(s)	1301
AvaII	GGWCC	4 cut(s)	450, 848, 1027, 1287
BaeGI	GKGCMC	1 cut(s)	987
BamHI	GGATCC	1 cut(s)	226
BanI	GGYRCC	1 cut(s)	984
BanII	GRGCYC	1 cut(s)	1302
BbsI	GAAGAC	3 cut(s)	461, 561, 694
Bbv12I	GWGCWC	1 cut(s)	1302
BccI	CCATC	3 cut(s)	68, 1009, 1288
BceAI	ACGGC	3 cut(s)	228, 474, 947
BciT130I	CCWGG	1 cut(s)	285
BciVI	GTATCC	1 cut(s)	1201
BclI	TGATCA	3 cut(s)	577, 858, 1237
BcoDI	GTCTC	1 cut(s)	1227
BcuI	ACTAGT	3 cut(s)	379, 736, 875
BfaI	CTAG	9 cut(s)	380, 386, 708, 737, 768, 822, 876, 1041, 1076
BfmI	CTRYAG	1 cut(s)	998
BfoI	RGCGCY	1 cut(s)	214
BfrI	CTTAAG	1 cut(s)	79
BfuI	GTATCC	1 cut(s)	1201
BisI	GCNGC	1 cut(s)	754
BlsI	GCNGC	1 cut(s)	755
BmcAI	AGTACT	2 cut(s)	874, 880
Bme1390I	CCNGG	1 cut(s)	285
Bme18I	GGWCC	4 cut(s)	450, 848, 1027, 1287
BmeT110I	CYCGRG	1 cut(s)	1301
BmgBI	CACGTC	1 cut(s)	222
BmgT120I	GGNCC	4 cut(s)	450, 848, 1027, 1287
BmiI	GGNNCC	5 cut(s)	228, 257, 849, 986, 1029
BmrFI	CCNGG	1 cut(s)	285
BmrI	ACTGGG	1 cut(s)	1118
BmsI	GCATC	3 cut(s)	110, 176, 610
BmtI	GCTAGC	1 cut(s)	389
BmuI	ACTGGG	1 cut(s)	1118
BoxI	GACNNNNGTC	1 cut(s)	775
BpiI	GAAGAC	3 cut(s)	461, 561, 694
BplI	GAGNNNNNCTC	2 cut(s)	1016, 1048
BpmI	CTGGAG	3 cut(s)	758, 1056, 1196
Bpu14I	TTCGAA	2 cut(s)	357, 684
BpuEI	CTTGAG	1 cut(s)	347
BsaBI	GATNNNNATC	2 cut(s)	100, 1236
BsaHI	GRCGYC	1 cut(s)	994
BsaJI	CCNNGG	3 cut(s)	446, 988, 1343
BsaWI	WCCGGW	1 cut(s)	1122
Bsc4I	CCNNNNNNNGG	2 cut(s)	307, 518
Bse1I	ACTGG	4 cut(s)	465, 775, 1113, 1358
Bse8I	GATNNNNATC	2 cut(s)	100, 1236
BseBI	CCWGG	1 cut(s)	285
BseDI	CCNNGG	3 cut(s)	446, 988, 1343
BseGI	GGATG	2 cut(s)	316, 655
BseJI	GATNNNNATC	2 cut(s)	100, 1236
BseLI	CCNNNNNNNGG	2 cut(s)	307, 518
BseNI	ACTGG	4 cut(s)	465, 775, 1113, 1358
BseSI	GKGCMC	1 cut(s)	987
BseX3I	CGGCCG	1 cut(s)	241
BseYI	CCCAGC	1 cut(s)	844
BsgI	GTGCAG	1 cut(s)	1028
Bsh1236I	CGCG	1 cut(s)	753
Bsh1285I	CGRYCG	1 cut(s)	244
BshFI	GGCC	4 cut(s)	243, 489, 511, 1351
BshNI	GGYRCC	1 cut(s)	984
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	1 cut(s)	1302
BsiHKCI	CYCGRG	1 cut(s)	1301
BsiSI	CCGG	1 cut(s)	1123
BslFI	GGGAC	1 cut(s)	861
BslI	CCNNNNNNNGG	2 cut(s)	307, 518
BsmAI	GTCTC	1 cut(s)	1227
BsmFI	GGGAC	1 cut(s)	861
BsmI	GAATGC	2 cut(s)	810, 823
BsnI	GGCC	4 cut(s)	243, 489, 511, 1351
BsoBI	CYCGRG	1 cut(s)	1301
Bsp119I	TTCGAA	2 cut(s)	357, 684
Bsp1286I	GDGCHC	2 cut(s)	987, 1302
Bsp143I	GATC	9 cut(s)	86, 226, 477, 577, 832, 858, 1192, 1231, 1237
Bsp19I	CCATGG	1 cut(s)	1343
BspACI	CCGC	2 cut(s)	564, 753
BspANI	GGCC	4 cut(s)	243, 489, 511, 1351
BspFNI	CGCG	1 cut(s)	753
BspHI	TCATGA	1 cut(s)	1234
BspLI	GGNNCC	5 cut(s)	228, 257, 849, 986, 1029
BspMAI	CTGCAG	1 cut(s)	1002
BspOI	GCTAGC	1 cut(s)	389
BspPI	GGATC	3 cut(s)	221, 234, 1187
BspT104I	TTCGAA	2 cut(s)	357, 684
BspT107I	GGYRCC	1 cut(s)	984
BspTI	CTTAAG	1 cut(s)	79
BsrI	ACTGG	4 cut(s)	465, 775, 1113, 1358
BssECI	CCNNGG	3 cut(s)	446, 988, 1343
BssMI	GATC	9 cut(s)	86, 226, 477, 577, 832, 858, 1192, 1231, 1237
BssNI	GRCGYC	1 cut(s)	994
BssT1I	CCWWGG	2 cut(s)	446, 1343
Bst2UI	CCWGG	1 cut(s)	285
Bst4CI	ACNGT	3 cut(s)	44, 425, 989
BstACI	GRCGYC	1 cut(s)	994
BstAFI	CTTAAG	1 cut(s)	79
BstAPI	GCANNNNNTGC	1 cut(s)	1006
BstBI	TTCGAA	2 cut(s)	357, 684
BstC8I	GCNNGC	3 cut(s)	387, 513, 1323
BstDSI	CCRYGG	2 cut(s)	988, 1343
BstF5I	GGATG	2 cut(s)	316, 655
BstFNI	CGCG	1 cut(s)	753
BstH2I	RGCGCY	1 cut(s)	214
BstHHI	GCGC	2 cut(s)	170, 213
BstKTI	GATC	9 cut(s)	89, 229, 480, 580, 835, 861, 1195, 1234, 1240
BstMAI	GTCTC	1 cut(s)	1227
BstMBI	GATC	9 cut(s)	86, 226, 477, 577, 832, 858, 1192, 1231, 1237
BstMCI	CGRYCG	1 cut(s)	244
BstMWI	GCNNNNNNNGC	1 cut(s)	1006
BstNI	CCWGG	1 cut(s)	285
BstNSI	RCATGY	1 cut(s)	1215
BstPAI	GACNNNNGTC	1 cut(s)	775
BstSCI	CCNGG	1 cut(s)	283
BstSFI	CTRYAG	1 cut(s)	998
BstSLI	GKGCMC	1 cut(s)	987
BstUI	CGCG	1 cut(s)	753
BstV2I	GAAGAC	3 cut(s)	461, 561, 694
BstX2I	RGATCY	1 cut(s)	226
BstXI	CCANNNNNNTGG	1 cut(s)	460
BstYI	RGATCY	1 cut(s)	226
BstZI	CGGCCG	1 cut(s)	241
BsuI	GTATCC	1 cut(s)	1201
BsuRI	GGCC	4 cut(s)	243, 489, 511, 1351
BtgI	CCRYGG	2 cut(s)	988, 1343
BtrI	CACGTC	1 cut(s)	222
BtsCI	GGATG	2 cut(s)	316, 655
Cac8I	GCNNGC	3 cut(s)	387, 513, 1323
CciI	TCATGA	1 cut(s)	1234
CfoI	GCGC	2 cut(s)	170, 213
Cfr13I	GGNCC	4 cut(s)	450, 848, 1027, 1287
CsiI	ACCWGGT	1 cut(s)	283
Csp6I	GTAC	6 cut(s)	288, 873, 879, 929, 1091, 1376
CviAII	CATG	8 cut(s)	393, 454, 744, 914, 1212, 1235, 1344, 1385
CviQI	GTAC	6 cut(s)	288, 873, 879, 929, 1091, 1376
DpnI	GATC	9 cut(s)	88, 228, 479, 579, 834, 860, 1194, 1233, 1239
DpnII	GATC	9 cut(s)	86, 226, 477, 577, 832, 858, 1192, 1231, 1237
EaeI	YGGCCR	1 cut(s)	241
EagI	CGGCCG	1 cut(s)	241
Ecl136II	GAGCTC	1 cut(s)	1300
EclXI	CGGCCG	1 cut(s)	241
Eco130I	CCWWGG	2 cut(s)	446, 1343
Eco147I	AGGCCT	1 cut(s)	511
Eco24I	GRGCYC	1 cut(s)	1302
Eco32I	GATATC	1 cut(s)	124
Eco47I	GGWCC	4 cut(s)	450, 848, 1027, 1287
Eco52I	CGGCCG	1 cut(s)	241
Eco53kI	GAGCTC	1 cut(s)	1300
Eco57I	CTGAAG	1 cut(s)	962
Eco88I	CYCGRG	1 cut(s)	1301
EcoICRI	GAGCTC	1 cut(s)	1300
EcoO109I	RGGNCCY	2 cut(s)	848, 1027
EcoRI	GAATTC	2 cut(s)	648, 686
EcoRII	CCWGG	1 cut(s)	283
EcoRV	GATATC	1 cut(s)	124
EcoT14I	CCWWGG	2 cut(s)	446, 1343
EcoT38I	GRGCYC	1 cut(s)	1302
ErhI	CCWWGG	2 cut(s)	446, 1343
FaeI	CATG	8 cut(s)	396, 457, 747, 917, 1215, 1238, 1347, 1388
FaqI	GGGAC	1 cut(s)	861
FatI	CATG	8 cut(s)	392, 453, 743, 913, 1211, 1234, 1343, 1384
FauI	CCCGC	1 cut(s)	571
FbaI	TGATCA	3 cut(s)	577, 858, 1237
Fnu4HI	GCNGC	1 cut(s)	754
FokI	GGATG	2 cut(s)	323, 642
FriOI	GRGCYC	1 cut(s)	1302
Fsp4HI	GCNGC	1 cut(s)	754
FspBI	CTAG	9 cut(s)	380, 386, 708, 737, 768, 822, 876, 1041, 1076
GlaI	GCGC	2 cut(s)	169, 212
GluI	GCNGC	1 cut(s)	754
GsaI	CCCAGC	1 cut(s)	848
GsuI	CTGGAG	3 cut(s)	758, 1056, 1196
HaeII	RGCGCY	1 cut(s)	214
HaeIII	GGCC	4 cut(s)	243, 489, 511, 1351
HapII	CCGG	1 cut(s)	1123
HhaI	GCGC	2 cut(s)	170, 213
Hin1I	GRCGYC	1 cut(s)	994
Hin1II	CATG	8 cut(s)	396, 457, 747, 917, 1215, 1238, 1347, 1388
Hin6I	GCGC	2 cut(s)	168, 211
HinP1I	GCGC	2 cut(s)	168, 211
HincII	GTYRAC	1 cut(s)	108
HindII	GTYRAC	1 cut(s)	108
HinfI	GANTC	8 cut(s)	65, 329, 342, 522, 694, 731, 771, 896
HpaII	CCGG	1 cut(s)	1123
HphI	GGTGA	5 cut(s)	23, 437, 731, 842, 905
Hpy166II	GTNNAC	3 cut(s)	108, 749, 992
Hpy188I	TCNGA	5 cut(s)	73, 226, 477, 1116, 1192
Hpy188III	TCNNGA	8 cut(s)	346, 364, 659, 691, 768, 944, 1035, 1235
Hpy8I	GTNNAC	3 cut(s)	108, 749, 992
Hpy99I	CGWCG	1 cut(s)	226
HpyAV	CCTTC	2 cut(s)	598, 986
HpyCH4III	ACNGT	3 cut(s)	44, 425, 989
HpyCH4IV	ACGT	3 cut(s)	221, 994, 1378
HpyCH4V	TGCA	9 cut(s)	189, 338, 441, 457, 495, 636, 1000, 1009, 1266
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1006
HpySE526I	ACGT	3 cut(s)	221, 994, 1378
Hsp92I	GRCGYC	1 cut(s)	994
Hsp92II	CATG	8 cut(s)	396, 457, 747, 917, 1215, 1238, 1347, 1388
HspAI	GCGC	2 cut(s)	168, 211
Ksp22I	TGATCA	3 cut(s)	577, 858, 1237
Kzo9I	GATC	9 cut(s)	86, 226, 477, 577, 832, 858, 1192, 1231, 1237
LmnI	GCTCC	4 cut(s)	261, 1037, 1297, 1344
LweI	GCATC	3 cut(s)	110, 176, 610
MabI	ACCWGGT	1 cut(s)	283
MaeI	CTAG	9 cut(s)	380, 386, 708, 737, 768, 822, 876, 1041, 1076
MaeII	ACGT	3 cut(s)	221, 994, 1378
MalI	GATC	9 cut(s)	88, 228, 479, 579, 834, 860, 1194, 1233, 1239
MboI	GATC	9 cut(s)	86, 226, 477, 577, 832, 858, 1192, 1231, 1237
MflI	RGATCY	1 cut(s)	226
MhlI	GDGCHC	2 cut(s)	987, 1302
MluCI	AATT	7 cut(s)	134, 374, 615, 648, 686, 908, 1368
MlyI	GAGTC	2 cut(s)	323, 765
MmeI	TCCRAC	1 cut(s)	204
MnlI	CCTC	5 cut(s)	79, 483, 1018, 1042, 1297
MseI	TTAA	2 cut(s)	80, 921
MslI	CAYNNNNRTG	2 cut(s)	660, 945
MspCI	CTTAAG	1 cut(s)	79
MspI	CCGG	1 cut(s)	1123
MspR9I	CCNGG	1 cut(s)	285
Mva1269I	GAATGC	2 cut(s)	810, 823
MvaI	CCWGG	1 cut(s)	285
MvnI	CGCG	1 cut(s)	753
MwoI	GCNNNNNNNGC	1 cut(s)	1006
NcoI	CCATGG	1 cut(s)	1343
NdeII	GATC	9 cut(s)	86, 226, 477, 577, 832, 858, 1192, 1231, 1237
NheI	GCTAGC	1 cut(s)	385
NlaIII	CATG	8 cut(s)	396, 457, 747, 917, 1215, 1238, 1347, 1388
NlaIV	GGNNCC	5 cut(s)	228, 257, 849, 986, 1029
NmeAIII	GCCGAG	1 cut(s)	649
NspI	RCATGY	1 cut(s)	1215
NspV	TTCGAA	2 cut(s)	357, 684
PaeR7I	CTCGAG	1 cut(s)	1301
PagI	TCATGA	1 cut(s)	1234
PceI	AGGCCT	1 cut(s)	511
PciI	ACATGT	1 cut(s)	1211
PctI	GAATGC	2 cut(s)	810, 823
PfeI	GAWTC	6 cut(s)	65, 342, 522, 694, 731, 896
PkrI	GCNGC	1 cut(s)	755
PleI	GAGTC	2 cut(s)	323, 765
PpsI	GAGTC	2 cut(s)	323, 765
PpuMI	RGGWCCY	2 cut(s)	848, 1027
PscI	ACATGT	1 cut(s)	1211
PshAI	GACNNNNGTC	1 cut(s)	775
PsiI	TTATAA	2 cut(s)	296, 1134
Psp124BI	GAGCTC	1 cut(s)	1302
Psp5II	RGGWCCY	2 cut(s)	848, 1027
Psp6I	CCWGG	1 cut(s)	283
PspFI	CCCAGC	1 cut(s)	844
PspGI	CCWGG	1 cut(s)	283
PspN4I	GGNNCC	5 cut(s)	228, 257, 849, 986, 1029
PspPI	GGNCC	4 cut(s)	450, 848, 1027, 1287
PspPPI	RGGWCCY	2 cut(s)	848, 1027
PspXI	VCTCGAGB	1 cut(s)	1301
PstI	CTGCAG	1 cut(s)	1002
PsuI	RGATCY	1 cut(s)	226
RsaI	GTAC	6 cut(s)	289, 874, 880, 930, 1092, 1377
RsaNI	GTAC	6 cut(s)	288, 873, 879, 929, 1091, 1376
RseI	CAYNNNNRTG	2 cut(s)	660, 945
SacI	GAGCTC	1 cut(s)	1302
SaqAI	TTAA	2 cut(s)	80, 921
SatI	GCNGC	1 cut(s)	754
Sau3AI	GATC	9 cut(s)	86, 226, 477, 577, 832, 858, 1192, 1231, 1237
Sau96I	GGNCC	4 cut(s)	450, 848, 1027, 1287
ScaI	AGTACT	2 cut(s)	874, 880
SchI	GAGTC	2 cut(s)	323, 765
ScrFI	CCNGG	1 cut(s)	285
SduI	GDGCHC	2 cut(s)	987, 1302
SexAI	ACCWGGT	1 cut(s)	283
SfaNI	GCATC	3 cut(s)	110, 176, 610
SfcI	CTRYAG	1 cut(s)	998
Sfr274I	CTCGAG	1 cut(s)	1301
SfuI	TTCGAA	2 cut(s)	357, 684
SinI	GGWCC	4 cut(s)	450, 848, 1027, 1287
SlaI	CTCGAG	1 cut(s)	1301
SmiMI	CAYNNNNRTG	2 cut(s)	660, 945
SmlI	CTYRAG	3 cut(s)	79, 362, 1301
SmoI	CTYRAG	3 cut(s)	79, 362, 1301
SpeI	ACTAGT	3 cut(s)	379, 736, 875
Sse9I	AATT	7 cut(s)	134, 374, 615, 648, 686, 908, 1368
SseBI	AGGCCT	1 cut(s)	511
SsiI	CCGC	2 cut(s)	564, 753
SspI	AATATT	1 cut(s)	115
SspMI	CTAG	9 cut(s)	380, 386, 708, 737, 768, 822, 876, 1041, 1076
SstI	GAGCTC	1 cut(s)	1302
StuI	AGGCCT	1 cut(s)	511
StyD4I	CCNGG	1 cut(s)	283
StyI	CCWWGG	2 cut(s)	446, 1343
TaaI	ACNGT	3 cut(s)	44, 425, 989
TaiI	ACGT	3 cut(s)	224, 997, 1381
TaqI	TCGA	3 cut(s)	357, 684, 1302
TaqII	GACCGA	1 cut(s)	889
TasI	AATT	7 cut(s)	134, 374, 615, 648, 686, 908, 1368
TatI	WGTACW	3 cut(s)	872, 878, 1090
TauI	GCSGC	1 cut(s)	756
TfiI	GAWTC	6 cut(s)	65, 342, 522, 694, 731, 896
Tru1I	TTAA	2 cut(s)	80, 921
Tru9I	TTAA	2 cut(s)	80, 921
TspDTI	ATGAA	6 cut(s)	327, 514, 644, 902, 954, 963
Vha464I	CTTAAG	1 cut(s)	79
VpaK11BI	GGWCC	4 cut(s)	450, 848, 1027, 1287
XapI	RAATTY	2 cut(s)	648, 686
XbaI	TCTAGA	1 cut(s)	767
XceI	RCATGY	1 cut(s)	1215
XcmI	CCANNNNNNNNNTGG	1 cut(s)	782
XhoI	CTCGAG	1 cut(s)	1301
XspI	CTAG	9 cut(s)	380, 386, 708, 737, 768, 822, 876, 1041, 1076
ZraI	GACGTC	1 cut(s)	995
ZrmI	AGTACT	2 cut(s)	874, 880

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.