Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001234

Physical Location & Seq

Genomic Coordinates Forward (+)

2201648 .. 2204099

Gene Structure 2452 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0027400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGTCAACGAGCACCATTCGCAAGGCGATCGGTGCCGTGAAGGATCAGACCAGCATTAGCCTGGCGAAGGTGGCCGGCACGATCGCGCCGGACTTGGAAGTTCTGGTGGTGAAGGCCACCACCCACGACGAGGACCCGGCCGACGAGAAGTACATCCGGGAGATCGTCGGCCTGACGTCACACTCGCGCGGGTACGTGACGGCGGCGGTGGCGACGATTTCGAAGCGGCTGAGCAAAACCCACGACTGGATTGTGGCGCTGAAGGCTCTGATGCTGGTGCACAGGCTGCTGATCGACGGCCACGCGCTGTTCGAGGAGGAGGTTGTGTACGCGGCGAGGAGGGGGATGAGGGTTTTGAACATGGCGGAGTTTCGGGACGAGGCGCATTCGAATTCGTGGGATCATGCTGGGTTTGTGAGGTGTTATGGTATGTATTTGGATGAGAAGGCGGAGTTTGAGGTGGCGGAGAGGAAGTCGAGGGGTGTGGATAATAGATTTGAGGAGAAGGAGAGTGAGTTTGAGTATGGAATGAGGCGTGCGAGGTCGAGTGAGTCATTGGAGAGAAAAGAGGGCAAGAATAGTACTCCGCTTAGGGAAATGAGGCCGGAGAGAGTGTTGGGAAGGTTGAATGATTTGTTGAGGGTTCTCGACAGAGTTTTGGGTTGTAGGCCGGCGGGTATGGCCAAGACTAGTAGGTTGGTGATTGTTGCGCTTTATGGGGTTGTGAAGGAGAGTTTTAGGCTGTATGTGGAGATATGTGAGGCGTTGGGGGTTTTGTTGGATAGGTTTGGGGAGATGGAGTACGGGGATTGTGTCAAGGCGTTTGATGTTTATGTTAATGCGGCGAAGGTGATTGATGAGCTGTTGTTGTTTTATAATTGGTGCAAGGATATGGGGATTGCGAGGACGTCTGAGTACCCGGAGGTGCTGAGAATAACTGATAAGCTTTTGGGGACACTTGAGGGTTACTTGAAGGAGAAGACAAATAGGCCAAAGAGTACACCTGAGAGGGAGGAGAGGGTTTATGTTGATGAGGAGGTGAAACAGAATGTGAATGTGAATGTGAATGAGATCAAGGCTCTTCCTGCACCGGAGAGTTTCACTCCTAGTCCTCCTCCGCCAGCACCTGTTGCGCAGCCTAAGCCGGCTTCACAGCCTCAGAGGGTGACTGATGAGTTGGTGAATTTGAGGGATGATGGAGTTACAGTTGATGAGCAAGGAAACAAGTTGGCTTTGGCATTGTTCTCTGGACCTCCTACTACTGCTACTACTAATCCAAATGGGTCCTGGGAAGCGTTTGATTCAAATGGAGAGCCTGAAGTGACCTCAGCGTGGCAGACGCCGGCTGCTGACAGCGGTAAAGCAGATTGGGAGTTGGCATTGGTTGAAACAGCTAGTAATCTGTCGAAGCAGAAGGCTGATTTGGCTGGTGGTTTTGATCCTCTGCTATTGAATGGAATGTATGATCAAGGGACGGTGAGGCAGCATGTGAGCACCTCACAATTGAGTGGTGGGAGTGCAAGTAGTGTGGCAATGCCCTTGCCACCAGGCAAGGGTTCTACGCCGGTGTTGGCCCTGCCTGCACCGGATGGGACAGTGCAAGCTGTGGGACAGCAAGATCCTTTCGCTGCCTCCCTTACTGTACCACCTCCTTCATATGTTCAAATAGCCGACATGGAGAGGAAGCAACACTTGCTTACGCAGGAACAGCTTCTTTGGCAGCAATATGGAAAAGATGGGATGCAAGGGCAAGTGAGTTTGGCCAAGCTTTCCGGCGGGTCTGGTTACTATGGTCCTCAACCAATGATGCCTTATGGGATGCCGCAGCCAGGAGGTTACTACTATGCGCCCTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0015934 GO:0016020 GO:0019538 GO:0022625 GO:0022626 GO:0030054 GO:0030312 GO:0032991 GO:0034641 GO:0034645 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0071704 GO:0071944 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_L31e

Protein Analysis

618

Amino Acids

68.04

Weight (kDa)

5.37

Isoelectric Point (pI)

37.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANTH	PF07651	31 - 325	1.3e-67	ANTH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001234)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19740 AT4G26230 AT5G56710
fragaria_vesca	FvH4_1g06780 FvH4_3g43260 FvH4_7g00730
malus_domestica	MD02G1072600.v1.1 MD02G1315000.v1.1 MD07G1007100.v1.1 MD15G1202200.v1.1
prunus_persica	Prupe.2G010000_v2.0.a1 Prupe.6G022500_v2.0.a1 Prupe.7G215000_v2.0.a1 Prupe.7G215000_v2.0.a1 Prupe.7G215000_v2.0.a1 Prupe.7G215000_v2.0.a1
pyrus_communis	pycom02g05660 pycom02g26400 pycom07g00560 pycom15g17960
rosa_chinensis	RchiOBHm_Chr1g0314951 RchiOBHm_Chr1g0319501 RchiOBHm_Chr2g0092551 RchiOBHm_Chr5g0077321
rosa_laevigata	RLG00000030752 RLG00000036685
rosa_multiflora	Rmu_co8293339.1_g000001 Rmu_sc0000433.1_g000029 Rmu_sc0007304.1_g000001 Rmu_sc0039322.1_g000001
rosa_roxburghii	Rroxscaffold_1G00004590 Rroxscaffold_2G00148980 Rroxscaffold_4G00331650
rosa_rugosa	Rorug01G0003400 Rorug01G0003500 Rorug02G0027400 Rorug02G0027500 Rorug02G0027600 Rorug02G0027600 Rorug05G0453700
rosa_samantha	Rh1AG014200 Rh1BG005900 Rh1CG040600 Rh1DG007800 Rh1DG029000 Rh2AG073300 Rh2BG074200 Rh2CG075300 Rh2DG072400 Rh5AG508900 Rh5BG530200 Rh5CG554600 Rh5DG542500
rosa_wichuraiana	Rw1G003220 Rw2G005960 Rw5G046850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	876
AatII	GACGTC	2 cut(s)	179, 911
Acc16I	TGCGCA	1 cut(s)	1134
AccB1I	GGYRCC	1 cut(s)	32
AccII	CGCG	5 cut(s)	86, 187, 189, 305, 332
AclWI	GGATC	4 cut(s)	51, 408, 1433, 1613
AcoI	YGGCCR	5 cut(s)	72, 138, 298, 681, 1761
AcsI	RAATTY	2 cut(s)	391, 1183
AcuI	CTGAAG	2 cut(s)	281, 1338
AcyI	GRCGYC	3 cut(s)	176, 908, 1340
AfaI	GTAC	8 cut(s)	152, 194, 329, 583, 803, 917, 1000, 1644
AfiI	CCNNNNNNNGG	6 cut(s)	67, 130, 246, 1332, 1553, 1829
AgsI	TTSAA	7 cut(s)	358, 628, 973, 1305, 1388, 1453, 1664
AhlI	ACTAGT	1 cut(s)	689
AjnI	CCWGG	4 cut(s)	60, 1286, 1546, 1828
AjuI	GAANNNNNNNTTGG	2 cut(s)	1406, 1438
AluBI	AGCT	6 cut(s)	862, 946, 1394, 1604, 1711, 1768
AluI	AGCT	6 cut(s)	862, 946, 1394, 1604, 1711, 1768
Alw21I	GWGCWC	3 cut(s)	14, 282, 1496
Alw44I	GTGCAC	1 cut(s)	278
AlwI	GGATC	4 cut(s)	51, 408, 1433, 1613
AlwNI	CAGNNNCTG	1 cut(s)	1127
ApaLI	GTGCAC	1 cut(s)	278
ApeKI	GCWGC	7 cut(s)	286, 1135, 1346, 1483, 1628, 1720, 1825
ApoI	RAATTY	2 cut(s)	391, 1183
Asp700I	GAANNNNTTC	1 cut(s)	1710
AspLEI	GCGC	8 cut(s)	88, 189, 259, 307, 385, 712, 1135, 1849
AspS9I	GGNCC	5 cut(s)	133, 1250, 1284, 1573, 1793
AsuC2I	CCSGG	3 cut(s)	137, 158, 920
AsuHPI	GGTGA	7 cut(s)	121, 712, 862, 1051, 1177, 1192, 1489
AsuII	TTCGAA	2 cut(s)	221, 389
AvaII	GGWCC	4 cut(s)	133, 1250, 1284, 1793
BaeGI	GKGCMC	1 cut(s)	282
BalI	TGGCCA	2 cut(s)	683, 1763
BanI	GGYRCC	1 cut(s)	32
BbsI	GAAGAC	1 cut(s)	986
Bbv12I	GWGCWC	3 cut(s)	14, 282, 1496
BbvCI	CCTCAGC	1 cut(s)	1327
BbvI	GCAGC	7 cut(s)	273, 1147, 1333, 1495, 1615, 1732, 1837
BccI	CCATC	4 cut(s)	790, 1190, 1583, 1730
BceAI	ACGGC	3 cut(s)	20, 216, 313
BcgI	CGANNNNNNTGC	2 cut(s)	10, 44
BciT130I	CCWGG	4 cut(s)	62, 1288, 1548, 1830
BclI	TGATCA	1 cut(s)	1465
BcnI	CCSGG	3 cut(s)	137, 158, 920
BcuI	ACTAGT	1 cut(s)	689
BfaI	CTAG	3 cut(s)	690, 1107, 1395
BfoI	RGCGCY	1 cut(s)	260
BlpI	GCTNAGC	1 cut(s)	230
BmcAI	AGTACT	1 cut(s)	583
Bme1390I	CCNGG	7 cut(s)	62, 137, 158, 920, 1288, 1548, 1830
Bme18I	GGWCC	4 cut(s)	133, 1250, 1284, 1793
BmgT120I	GGNCC	5 cut(s)	133, 1250, 1284, 1573, 1793
BmiI	GGNNCC	3 cut(s)	34, 135, 1285
BmrFI	CCNGG	7 cut(s)	62, 137, 158, 920, 1288, 1548, 1830
BmsI	GCATC	4 cut(s)	261, 1731, 1797, 1809
BpiI	GAAGAC	1 cut(s)	986
BplI	GAGNNNNNCTC	2 cut(s)	1087, 1119
Bpu10I	CCTNAGC	3 cut(s)	590, 1140, 1327
Bpu1102I	GCTNAGC	1 cut(s)	230
Bpu14I	TTCGAA	2 cut(s)	221, 389
BpuEI	CTTGAG	1 cut(s)	980
BpuMI	CCSGG	3 cut(s)	137, 158, 920
BsaAI	YACGTR	1 cut(s)	196
BsaHI	GRCGYC	3 cut(s)	176, 908, 1340
BsaJI	CCNNGG	1 cut(s)	1287
BsaWI	WCCGGW	2 cut(s)	1090, 1585
Bsc4I	CCNNNNNNNGG	6 cut(s)	67, 130, 246, 1332, 1553, 1829
Bse118I	RCCGGY	5 cut(s)	74, 670, 1144, 1342, 1564
Bse1I	ACTGG	1 cut(s)	251
Bse3DI	GCAATG	1 cut(s)	1539
BseBI	CCWGG	4 cut(s)	62, 1288, 1548, 1830
BseDI	CCNNGG	1 cut(s)	1287
BseGI	GGATG	7 cut(s)	153, 351, 445, 1198, 1594, 1746, 1824
BseLI	CCNNNNNNNGG	6 cut(s)	67, 130, 246, 1332, 1553, 1829
BseMI	GCAATG	1 cut(s)	1539
BseMII	CTCAG	6 cut(s)	221, 903, 920, 996, 1172, 1341
BseNI	ACTGG	1 cut(s)	251
BseRI	GAGGAG	7 cut(s)	329, 332, 352, 515, 1028, 1049, 1104
BseSI	GKGCMC	1 cut(s)	282
BseX3I	CGGCCG	1 cut(s)	138
BseXI	GCAGC	7 cut(s)	273, 1147, 1333, 1495, 1615, 1732, 1837
BseYI	CCCAGC	1 cut(s)	407
BsgI	GTGCAG	2 cut(s)	1071, 1566
Bsh1236I	CGCG	5 cut(s)	86, 187, 189, 305, 332
Bsh1285I	CGRYCG	3 cut(s)	30, 84, 141
BshNI	GGYRCC	1 cut(s)	32
BsiEI	CGRYCG	3 cut(s)	30, 84, 141
BsiHKAI	GWGCWC	3 cut(s)	14, 282, 1496
BslFI	GGGAC	5 cut(s)	389, 967, 1486, 1606, 1623
BslI	CCNNNNNNNGG	6 cut(s)	67, 130, 246, 1332, 1553, 1829
BsmFI	GGGAC	5 cut(s)	389, 967, 1486, 1606, 1623
BsmI	GAATGC	1 cut(s)	385
Bsp119I	TTCGAA	2 cut(s)	221, 389
Bsp1286I	GDGCHC	3 cut(s)	14, 282, 1496
Bsp1720I	GCTNAGC	1 cut(s)	230
BspCNI	CTCAG	6 cut(s)	222, 904, 921, 997, 1171, 1340
BspFNI	CGCG	5 cut(s)	86, 187, 189, 305, 332
BspLI	GGNNCC	3 cut(s)	34, 135, 1285
BspPI	GGATC	4 cut(s)	51, 408, 1433, 1613
BspQI	GCTCTTC	1 cut(s)	1086
BspT104I	TTCGAA	2 cut(s)	221, 389
BspT107I	GGYRCC	1 cut(s)	32
BsrDI	GCAATG	1 cut(s)	1539
BsrFI	RCCGGY	5 cut(s)	74, 670, 1144, 1342, 1564
BsrI	ACTGG	1 cut(s)	251
BssAI	RCCGGY	5 cut(s)	74, 670, 1144, 1342, 1564
BssECI	CCNNGG	1 cut(s)	1287
BssNI	GRCGYC	3 cut(s)	176, 908, 1340
Bst2UI	CCWGG	4 cut(s)	62, 1288, 1548, 1830
Bst4CI	ACNGT	4 cut(s)	1207, 1477, 1597, 1642
Bst6I	CTCTTC	1 cut(s)	1086
BstACI	GRCGYC	3 cut(s)	176, 908, 1340
BstAPI	GCANNNNNTGC	3 cut(s)	286, 1130, 1693
BstBAI	YACGTR	1 cut(s)	196
BstBI	TTCGAA	2 cut(s)	221, 389
BstC8I	GCNNGC	8 cut(s)	76, 537, 672, 1122, 1146, 1344, 1581, 1602
BstDEI	CTNAG	8 cut(s)	230, 590, 912, 929, 1005, 1140, 1158, 1327
BstENI	CCTNNNNNAGG	1 cut(s)	65
BstF5I	GGATG	7 cut(s)	153, 351, 445, 1198, 1594, 1746, 1824
BstFNI	CGCG	5 cut(s)	86, 187, 189, 305, 332
BstH2I	RGCGCY	1 cut(s)	260
BstHHI	GCGC	8 cut(s)	88, 189, 259, 307, 385, 712, 1135, 1849
BstMCI	CGRYCG	3 cut(s)	30, 84, 141
BstNI	CCWGG	4 cut(s)	62, 1288, 1548, 1830
BstNSI	RCATGY	1 cut(s)	1490
BstSCI	CCNGG	7 cut(s)	60, 135, 156, 918, 1286, 1546, 1828
BstSLI	GKGCMC	1 cut(s)	282
BstUI	CGCG	5 cut(s)	86, 187, 189, 305, 332
BstV1I	GCAGC	7 cut(s)	273, 1147, 1333, 1495, 1615, 1732, 1837
BstV2I	GAAGAC	1 cut(s)	986
BstX2I	RGATCY	1 cut(s)	1618
BstYI	RGATCY	1 cut(s)	1618
BstZI	CGGCCG	1 cut(s)	138
BtsCI	GGATG	7 cut(s)	153, 351, 445, 1198, 1594, 1746, 1824
BtsIMutI	CAGTG	1 cut(s)	1602
Cac8I	GCNNGC	8 cut(s)	76, 537, 672, 1122, 1146, 1344, 1581, 1602
CaiI	CAGNNNCTG	1 cut(s)	1127
CfoI	GCGC	8 cut(s)	88, 189, 259, 307, 385, 712, 1135, 1849
Cfr10I	RCCGGY	5 cut(s)	74, 670, 1144, 1342, 1564
Cfr13I	GGNCC	5 cut(s)	133, 1250, 1284, 1573, 1793
CseI	GACGC	1 cut(s)	1348
Csp6I	GTAC	8 cut(s)	151, 193, 328, 582, 802, 916, 999, 1643
CspCI	CAANNNNNGTGG	2 cut(s)	1509, 1544
CviAII	CATG	4 cut(s)	361, 404, 1487, 1675
CviQI	GTAC	8 cut(s)	151, 193, 328, 582, 802, 916, 999, 1643
DdeI	CTNAG	8 cut(s)	230, 590, 912, 929, 1005, 1140, 1158, 1327
EaeI	YGGCCR	5 cut(s)	72, 138, 298, 681, 1761
EagI	CGGCCG	1 cut(s)	138
Eam1104I	CTCTTC	1 cut(s)	1086
EarI	CTCTTC	1 cut(s)	1086
EciI	GGCGGA	4 cut(s)	380, 464, 479, 1107
EclXI	CGGCCG	1 cut(s)	138
Eco47I	GGWCC	4 cut(s)	133, 1250, 1284, 1793
Eco52I	CGGCCG	1 cut(s)	138
Eco57I	CTGAAG	2 cut(s)	281, 1338
EcoNI	CCTNNNNNAGG	1 cut(s)	65
EcoO109I	RGGNCCY	2 cut(s)	133, 1284
EcoRI	GAATTC	1 cut(s)	391
EcoRII	CCWGG	4 cut(s)	60, 1286, 1546, 1828
FaeI	CATG	4 cut(s)	364, 407, 1490, 1678
FalI	AAGNNNNNCTT	2 cut(s)	1676, 1708
FaqI	GGGAC	5 cut(s)	389, 967, 1486, 1606, 1623
FatI	CATG	4 cut(s)	360, 403, 1486, 1674
FauI	CCCGC	3 cut(s)	182, 667, 1769
FauNDI	CATATG	1 cut(s)	1657
FbaI	TGATCA	1 cut(s)	1465
FokI	GGATG	7 cut(s)	140, 358, 452, 1205, 1601, 1753, 1831
FspBI	CTAG	3 cut(s)	690, 1107, 1395
FspI	TGCGCA	1 cut(s)	1134
GlaI	GCGC	8 cut(s)	87, 188, 258, 306, 384, 711, 1134, 1848
GsaI	CCCAGC	1 cut(s)	411
HaeII	RGCGCY	1 cut(s)	260
HgaI	GACGC	1 cut(s)	1348
HhaI	GCGC	8 cut(s)	88, 189, 259, 307, 385, 712, 1135, 1849
Hin1I	GRCGYC	3 cut(s)	176, 908, 1340
Hin1II	CATG	4 cut(s)	364, 407, 1490, 1678
Hin6I	GCGC	8 cut(s)	86, 187, 257, 305, 383, 710, 1133, 1847
HinP1I	GCGC	8 cut(s)	86, 187, 257, 305, 383, 710, 1133, 1847
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HindIII	AAGCTT	2 cut(s)	944, 1766
HinfI	GANTC	2 cut(s)	551, 1301
HphI	GGTGA	7 cut(s)	121, 712, 862, 1051, 1177, 1192, 1489
Hpy166II	GTNNAC	4 cut(s)	6, 280, 328, 1001
Hpy188I	TCNGA	4 cut(s)	48, 270, 913, 1161
Hpy188III	TCNNGA	3 cut(s)	374, 647, 1248
Hpy8I	GTNNAC	4 cut(s)	6, 280, 328, 1001
Hpy99I	CGWCG	5 cut(s)	131, 146, 170, 217, 299
HpyCH4III	ACNGT	4 cut(s)	1207, 1477, 1597, 1642
HpyCH4IV	ACGT	3 cut(s)	176, 195, 908
HpyCH4V	TGCA	7 cut(s)	280, 885, 1088, 1520, 1583, 1600, 1744
HpyF3I	CTNAG	8 cut(s)	230, 590, 912, 929, 1005, 1140, 1158, 1327
HpySE526I	ACGT	3 cut(s)	176, 195, 908
Hsp92I	GRCGYC	3 cut(s)	176, 908, 1340
Hsp92II	CATG	4 cut(s)	364, 407, 1490, 1678
HspAI	GCGC	8 cut(s)	86, 187, 257, 305, 383, 710, 1133, 1847
KroI	GCCGGC	4 cut(s)	74, 670, 1144, 1342
KroNI	GCCGGC	4 cut(s)	76, 672, 1146, 1344
Ksp22I	TGATCA	1 cut(s)	1465
LguI	GCTCTTC	1 cut(s)	1086
Lsp1109I	GCAGC	7 cut(s)	273, 1147, 1333, 1495, 1615, 1732, 1837
LweI	GCATC	4 cut(s)	261, 1731, 1797, 1809
MaeI	CTAG	3 cut(s)	690, 1107, 1395
MaeII	ACGT	3 cut(s)	176, 195, 908
MaeIII	GTNAC	8 cut(s)	177, 196, 965, 1165, 1201, 1321, 1784, 1835
MboII	GAAGA	2 cut(s)	991, 1073
MfeI	CAATTG	1 cut(s)	1502
MflI	RGATCY	1 cut(s)	1618
MhlI	GDGCHC	3 cut(s)	14, 282, 1496
MlsI	TGGCCA	2 cut(s)	683, 1763
MluCI	AATT	4 cut(s)	391, 877, 1183, 1502
MluNI	TGGCCA	2 cut(s)	683, 1763
MlyI	GAGTC	1 cut(s)	560
MmeI	TCCRAC	1 cut(s)	759
Mox20I	TGGCCA	2 cut(s)	683, 1763
MroNI	GCCGGC	4 cut(s)	74, 670, 1144, 1342
MroXI	GAANNNNTTC	1 cut(s)	1710
MscI	TGGCCA	2 cut(s)	683, 1763
MseI	TTAA	2 cut(s)	837, 1855
Msp20I	TGGCCA	2 cut(s)	683, 1763
MspA1I	CMGCKG	1 cut(s)	1356
MspR9I	CCNGG	7 cut(s)	62, 137, 158, 920, 1288, 1548, 1830
MunI	CAATTG	1 cut(s)	1502
Mva1269I	GAATGC	1 cut(s)	385
MvaI	CCWGG	4 cut(s)	62, 1288, 1548, 1830
MvnI	CGCG	5 cut(s)	86, 187, 189, 305, 332
NaeI	GCCGGC	4 cut(s)	76, 672, 1146, 1344
NciI	CCSGG	3 cut(s)	137, 158, 920
NdeI	CATATG	1 cut(s)	1657
NgoMIV	GCCGGC	4 cut(s)	74, 670, 1144, 1342
NlaIII	CATG	4 cut(s)	364, 407, 1490, 1678
NlaIV	GGNNCC	3 cut(s)	34, 135, 1285
NmuCI	GTSAC	4 cut(s)	177, 196, 1165, 1321
NsbI	TGCGCA	1 cut(s)	1134
NspI	RCATGY	1 cut(s)	1490
NspV	TTCGAA	2 cut(s)	221, 389
PciSI	GCTCTTC	1 cut(s)	1086
PcsI	WCGNNNNNNNCGW	1 cut(s)	309
PctI	GAATGC	1 cut(s)	385
PdiI	GCCGGC	4 cut(s)	76, 672, 1146, 1344
PdmI	GAANNNNTTC	1 cut(s)	1710
PfeI	GAWTC	1 cut(s)	1301
PfoI	TCCNGGA	1 cut(s)	156
Ple19I	CGATCG	2 cut(s)	30, 84
PleI	GAGTC	1 cut(s)	559
PpsI	GAGTC	1 cut(s)	559
Ppu21I	YACGTR	1 cut(s)	196
PpuMI	RGGWCCY	2 cut(s)	133, 1284
PsiI	TTATAA	1 cut(s)	876
Psp5II	RGGWCCY	2 cut(s)	133, 1284
Psp6I	CCWGG	4 cut(s)	60, 1286, 1546, 1828
PspFI	CCCAGC	1 cut(s)	407
PspGI	CCWGG	4 cut(s)	60, 1286, 1546, 1828
PspN4I	GGNNCC	3 cut(s)	34, 135, 1285
PspPI	GGNCC	5 cut(s)	133, 1250, 1284, 1573, 1793
PspPPI	RGGWCCY	2 cut(s)	133, 1284
PstNI	CAGNNNCTG	1 cut(s)	1127
PsuI	RGATCY	1 cut(s)	1618
PvuI	CGATCG	2 cut(s)	30, 84
RsaI	GTAC	8 cut(s)	152, 194, 329, 583, 803, 917, 1000, 1644
RsaNI	GTAC	8 cut(s)	151, 193, 328, 582, 802, 916, 999, 1643
SapI	GCTCTTC	1 cut(s)	1086
SaqAI	TTAA	2 cut(s)	837, 1855
Sau96I	GGNCC	5 cut(s)	133, 1250, 1284, 1573, 1793
ScaI	AGTACT	1 cut(s)	583
SchI	GAGTC	1 cut(s)	560
ScrFI	CCNGG	7 cut(s)	62, 137, 158, 920, 1288, 1548, 1830
SduI	GDGCHC	3 cut(s)	14, 282, 1496
SfaNI	GCATC	4 cut(s)	261, 1731, 1797, 1809
SfuI	TTCGAA	2 cut(s)	221, 389
SgrAI	CRCCGGYG	1 cut(s)	1564
SinI	GGWCC	4 cut(s)	133, 1250, 1284, 1793
SmlI	CTYRAG	1 cut(s)	959
SmoI	CTYRAG	1 cut(s)	959
SpeI	ACTAGT	1 cut(s)	689
Sse9I	AATT	4 cut(s)	391, 877, 1183, 1502
SspMI	CTAG	3 cut(s)	690, 1107, 1395
StyD4I	CCNGG	7 cut(s)	60, 135, 156, 918, 1286, 1546, 1828
TaaI	ACNGT	4 cut(s)	1207, 1477, 1597, 1642
TaiI	ACGT	3 cut(s)	179, 198, 911
TaqI	TCGA	8 cut(s)	221, 294, 312, 389, 476, 545, 648, 1406
TasI	AATT	4 cut(s)	391, 877, 1183, 1502
TatI	WGTACW	3 cut(s)	150, 581, 998
TauI	GCSGC	5 cut(s)	206, 229, 335, 845, 1825
TfiI	GAWTC	1 cut(s)	1301
Tru1I	TTAA	2 cut(s)	837, 1855
Tru9I	TTAA	2 cut(s)	837, 1855
TscAI	CASTG	1 cut(s)	1602
TseFI	GTSAC	4 cut(s)	177, 196, 1165, 1321
TseI	GCWGC	7 cut(s)	286, 1135, 1346, 1483, 1628, 1720, 1825
Tsp45I	GTSAC	4 cut(s)	177, 196, 1165, 1321
TspDTI	ATGAA	1 cut(s)	1644
TspRI	CASTG	1 cut(s)	1602
VneI	GTGCAC	1 cut(s)	278
VpaK11BI	GGWCC	4 cut(s)	133, 1250, 1284, 1793
XagI	CCTNNNNNAGG	1 cut(s)	65
XapI	RAATTY	2 cut(s)	391, 1183
XceI	RCATGY	1 cut(s)	1490
XcmI	CCANNNNNNNNNTGG	2 cut(s)	58, 1284
XmnI	GAANNNNTTC	1 cut(s)	1710
XspI	CTAG	3 cut(s)	690, 1107, 1395
ZraI	GACGTC	2 cut(s)	177, 909
ZrmI	AGTACT	1 cut(s)	583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.