60S ribosomal Protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_L31e | PF01198 | 1 - 44 | 3.1e-18 | Ribosomal protein L31e |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 191 |
| AccB1I | GGYRCC | 1 cut(s) | 191 |
| AccII | CGCG | 1 cut(s) | 87 |
| AciI | CCGC | 1 cut(s) | 167 |
| AfaI | GTAC | 1 cut(s) | 193 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 173 |
| AgsI | TTSAA | 1 cut(s) | 181 |
| AjnI | CCWGG | 1 cut(s) | 144 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 119, 151 |
| Asp718I | GGTACC | 1 cut(s) | 191 |
| AsuHPI | GGTGA | 1 cut(s) | 211 |
| AsuII | TTCGAA | 1 cut(s) | 64 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 183, 216 |
| BanI | GGYRCC | 1 cut(s) | 191 |
| BceAI | ACGGC | 1 cut(s) | 39 |
| BciT130I | CCWGG | 1 cut(s) | 146 |
| Bme1390I | CCNGG | 1 cut(s) | 146 |
| BmiI | GGNNCC | 3 cut(s) | 53, 165, 193 |
| BmrFI | CCNGG | 1 cut(s) | 146 |
| BmsI | GCATC | 1 cut(s) | 112 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 125, 157 |
| Bpu14I | TTCGAA | 1 cut(s) | 64 |
| BsaJI | CCNNGG | 4 cut(s) | 55, 126, 144, 195 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 173 |
| BseBI | CCWGG | 1 cut(s) | 146 |
| BseDI | CCNNGG | 4 cut(s) | 55, 126, 144, 195 |
| BseGI | GGATG | 1 cut(s) | 31 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 173 |
| Bsh1236I | CGCG | 1 cut(s) | 87 |
| BshNI | GGYRCC | 1 cut(s) | 191 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 173 |
| Bsp119I | TTCGAA | 1 cut(s) | 64 |
| BspACI | CCGC | 1 cut(s) | 167 |
| BspFNI | CGCG | 1 cut(s) | 87 |
| BspLI | GGNNCC | 3 cut(s) | 53, 165, 193 |
| BspT104I | TTCGAA | 1 cut(s) | 64 |
| BspT107I | GGYRCC | 1 cut(s) | 191 |
| BssECI | CCNNGG | 4 cut(s) | 55, 126, 144, 195 |
| BssT1I | CCWWGG | 2 cut(s) | 126, 195 |
| Bst2UI | CCWGG | 1 cut(s) | 146 |
| Bst4CI | ACNGT | 1 cut(s) | 154 |
| Bst6I | CTCTTC | 1 cut(s) | 126 |
| BstBI | TTCGAA | 1 cut(s) | 64 |
| BstDSI | CCRYGG | 1 cut(s) | 55 |
| BstF5I | GGATG | 1 cut(s) | 31 |
| BstFNI | CGCG | 1 cut(s) | 87 |
| BstNI | CCWGG | 1 cut(s) | 146 |
| BstSCI | CCNGG | 1 cut(s) | 144 |
| BstUI | CGCG | 1 cut(s) | 87 |
| BtgI | CCRYGG | 1 cut(s) | 55 |
| BtsCI | GGATG | 1 cut(s) | 31 |
| CseI | GACGC | 1 cut(s) | 76 |
| Csp6I | GTAC | 1 cut(s) | 192 |
| CviJI | RGCY | 3 cut(s) | 5, 54, 186 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 54, 186 |
| CviQI | GTAC | 1 cut(s) | 192 |
| Eam1104I | CTCTTC | 1 cut(s) | 126 |
| EarI | CTCTTC | 1 cut(s) | 126 |
| EciI | GGCGGA | 1 cut(s) | 156 |
| Eco130I | CCWWGG | 2 cut(s) | 126, 195 |
| EcoRII | CCWGG | 1 cut(s) | 144 |
| EcoT14I | CCWWGG | 2 cut(s) | 126, 195 |
| ErhI | CCWWGG | 2 cut(s) | 126, 195 |
| FaiI | YATR | 1 cut(s) | 45 |
| FokI | GGATG | 1 cut(s) | 38 |
| HgaI | GACGC | 1 cut(s) | 76 |
| HinfI | GANTC | 1 cut(s) | 61 |
| HphI | GGTGA | 1 cut(s) | 211 |
| Hpy188I | TCNGA | 2 cut(s) | 20, 92 |
| HpyAV | CCTTC | 2 cut(s) | 72, 175 |
| HpyCH4III | ACNGT | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 1 cut(s) | 98 |
| KpnI | GGTACC | 1 cut(s) | 195 |
| LmnI | GCTCC | 1 cut(s) | 51 |
| LpnPI | CCDG | 3 cut(s) | 131, 158, 183 |
| LweI | GCATC | 1 cut(s) | 112 |
| MaeIII | GTNAC | 2 cut(s) | 148, 154 |
| MboII | GAAGA | 3 cut(s) | 128, 131, 143 |
| MluCI | AATT | 1 cut(s) | 93 |
| MnlI | CCTC | 2 cut(s) | 154, 166 |
| MseI | TTAA | 1 cut(s) | 30 |
| MspR9I | CCNGG | 1 cut(s) | 146 |
| MvaI | CCWGG | 1 cut(s) | 146 |
| MvnI | CGCG | 1 cut(s) | 87 |
| NlaIV | GGNNCC | 3 cut(s) | 53, 165, 193 |
| NspV | TTCGAA | 1 cut(s) | 64 |
| PfeI | GAWTC | 1 cut(s) | 61 |
| Psp6I | CCWGG | 1 cut(s) | 144 |
| PspGI | CCWGG | 1 cut(s) | 144 |
| PspN4I | GGNNCC | 3 cut(s) | 53, 165, 193 |
| RsaI | GTAC | 1 cut(s) | 193 |
| RsaNI | GTAC | 1 cut(s) | 192 |
| SaqAI | TTAA | 1 cut(s) | 30 |
| ScrFI | CCNGG | 1 cut(s) | 146 |
| SetI | ASST | 2 cut(s) | 165, 201 |
| SfaNI | GCATC | 1 cut(s) | 112 |
| SfuI | TTCGAA | 1 cut(s) | 64 |
| Sse9I | AATT | 1 cut(s) | 93 |
| SsiI | CCGC | 1 cut(s) | 167 |
| StyD4I | CCNGG | 1 cut(s) | 144 |
| StyI | CCWWGG | 2 cut(s) | 126, 195 |
| TaaI | ACNGT | 1 cut(s) | 154 |
| TaqI | TCGA | 1 cut(s) | 64 |
| TasI | AATT | 1 cut(s) | 93 |
| TfiI | GAWTC | 1 cut(s) | 61 |
| Tru1I | TTAA | 1 cut(s) | 30 |
| Tru9I | TTAA | 1 cut(s) | 30 |
| TspDTI | ATGAA | 1 cut(s) | 129 |