Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001409

Physical Location & Seq

Genomic Coordinates Reverse (-)

31117637 .. 31124507

Gene Structure 6871 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0298900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGAACATCACTCGTTCGAGTAAGAGAGCTCTATCAATTCTGGACCAATGCCTCACAATGGCGCACATCAAGCAAGTTCAATCCCATCTCGCAGTTTCGGGCACCCTTTTCGATCCTTACGCAGCAGCCAAGATCATTGCCTTCTGCACCGTCTCTGATGATCTACGCCACGCTTATCAACTCTTCCGTTTCATGCCTAGCCGAACCACTTACATTTGGAATGTCATGATCAGAGCCTTTACCGACAGAAATGAATCCATAAGCGCCTTATCTCTCTACAATGATATGCTTCGAAGCGGTTTCTTGCCTGATAACTACACATTCTCTTTTGTTCTGCGAGCTTGTGCTGAGCTCTCCAGTGTTTCTTTTGGCGTGGTGCTCCATGCCCATGCCATTAGGTTGGGTTGGGAGTCTTATGATTTTGTGCAGAATGGCTTGATCCATTTGTATGTGACGTGTGACTTTATAAACCCAGCTCGTAAACTGTTTGATATGAGTGTGTATAAAGATGTAGTCACCTGGACTGCATTGGTTAATGGGTATGTTAGGTCTGGCCAGATTTTGTTCGCACGCCAACTGTTCGATGAAATGCCTGAGAAAAATGCGGTTTCTTGGAGTGCTATGATTAACGGGTATGTGCATTTGGGGTTGTTTAGAGAGGCCTTGGAGCTTTTTGCTGATATGCAGACTGCTGGTGTTTCTCCTAACCATGCCGGGATTGTGGGTGCGCTCACTGCTTGCGCTTTTGTTGGTGCATTGGATCAGGGAAGGTGGATACATGCCTATGTCAACAGGAAGAGGATGAGATTAGGTACAGTGTTGGGCACTGCTCTTGTTGACATGTACACAAAGTGTGGTTGTGTTGAAACTGCTCGCTCTGTGTTTGATGAGATGCCGAAGAGGGATGTGTTTGCTTTTACTTCTTTGATATCAGGTCTTGCTAATAATGGTGAGAGTGCAAGTGCCATTTCGTTGTTTGTGAGAATGAAGAATGAGGGAATTGCGCCTAATGAAGTTACATTTGTATGTGTCTTGAGTGCTTGCAGTCGAGTAGGGATGGTGGATGAGGGATTGCAAATCTTCAGAAGTATGAACAATAGTTTCGGGATACAGCCAGGGGTCCAGCATTATGGTTGTTTGGTGGATTTACTGGGGAGAGCTGGGATGCTAGAGGAGGCAAAGAAGATTGTGACAGAGATGCCAATGGAACCAGACTCGTACGTCTTGGGTGCATTGCTCAATGCTTGTAGAGTTCATGGAGACCTTGATTTGGGAAAAGAAATGGTAGAGCGCTTCACCGGGCAAAGATTAGACCACAGTGGTGTGCATGTTCTTCTTTCAAACATTTATGCCTCTGAAAACCAGTGGGACGATGTCACACTCTTAAGGAAGGGAATGGAGGAGAAAAGGGTGAGAAAGGTTCCCGGATGTAGCTTAATTGAAGTCAATGGCGAGGTTTATGAGTTTACCGCTGGAGACAGGTCGCATGTGCTCATGCAGGAAATCATGTTGTTGTCATTTGCAACTGCCAAGCATTTGAAGTCTTTTTGGTTTGATGGTGATGAAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0016104 GO:0016114 GO:0016853 GO:0016866 GO:0019742 GO:0019745 GO:0031559 GO:0042299 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00909 ko01110 map00909 map01110

Pfam Domains

Protein Families

SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

523

Amino Acids

58.4

Weight (kDa)

6.12

Isoelectric Point (pI)

39.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	69 - 116	3.8e-11	PPR repeat family
PPR_2	PF13041	169 - 201	3.9e-06	PPR repeat family
PPR	PF01535	172 - 201	1.1e-06	PPR repeat
PPR_2	PF13041	200 - 237	1.5e-08	PPR repeat family
PPR	PF01535	203 - 233	3.2e-08	PPR repeat
PPR_2	PF13041	301 - 349	2.3e-11	PPR repeat family
PPR_3	PF13812	301 - 348	7.8e-08	Pentatricopeptide repeat domain
E_motif	PF20431	420 - 481	1e-11	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001409)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g10860 FvH4_7g10860 FvH4_7g10860
malus_domestica	MD17G1158900.v1.1 MD17G1160000.v1.1 MD17G1246000.v1.1 MD17G1246100.v1.1 MD17G1246500.v1.1 MD17G1246700.v1.1
prunus_persica	Prupe.1G002600_v2.0.a1 Prupe.1G002600_v2.0.a1 Prupe.7G043400_v2.0.a1
pyrus_communis	pycom16g19870 pycom16g24410
rosa_chinensis	RchiOBHm_Chr1g0332711 RchiOBHm_Chr2g0148781 RchiOBHm_Chr4g0385071 RchiOBHm_Chr4g0385101
rosa_laevigata	RLG00000010257
rosa_multiflora	Rmu_co8015556.1_g000001 Rmu_co8308753.1_g000001 Rmu_co8434809.1_g000001 Rmu_sc0000824.1_g000004 Rmu_sc0001548.1_g000031 Rmu_sc0001548.1_g000053 Rmu_sc0002070.1_g000040 Rmu_sc0002116.1_g000014 Rmu_sc0003929.1_g000004 Rmu_sc0008546.1_g000012 Rmu_sc0008678.1_g000005 Rmu_ssc0000158.1_g000036
rosa_roxburghii	Rroxscaffold_5G00333010 Rroxscaffold_5G00342310
rosa_rugosa	Rorug03G0113700 Rorug03G0225800 Rorug03G0298900
rosa_samantha	Rh1CG121300 Rh1DG132500 Rh2AG466900 Rh2CG453300 Rh2CG453700 Rh4AG002600 Rh4AG078200 Rh4AG078500 Rh4BG002100 Rh4BG073600 Rh4BG073800 Rh4BG075600 Rh4BG076300 Rh4DG002100 Rh4DG071700 Rh7BG219000
rosa_wichuraiana	Rw4G000670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	467
AasI	GACNNNNNNGTC	1 cut(s)	1220
AccB1I	GGYRCC	1 cut(s)	101
AciI	CCGC	3 cut(s)	297, 605, 1470
AclWI	GGATC	3 cut(s)	107, 433, 768
AcoI	YGGCCR	1 cut(s)	553
AcuI	CTGAAG	1 cut(s)	1066
AdeI	CACNNNGTG	1 cut(s)	852
AfaI	GTAC	3 cut(s)	814, 845, 1220
AfeI	AGCGCT	1 cut(s)	1292
AfiI	CCNNNNNNNGG	2 cut(s)	58, 1270
AflII	CTTAAG	1 cut(s)	1384
AflIII	ACRYGT	2 cut(s)	455, 840
AgsI	TTSAA	5 cut(s)	80, 866, 1341, 1442, 1540
AjiI	CACGTC	1 cut(s)	456
AjnI	CCWGG	2 cut(s)	518, 1114
AleI	CACNNNNGTG	1 cut(s)	1320
AluBI	AGCT	7 cut(s)	29, 341, 352, 476, 670, 1160, 1434
AluI	AGCT	7 cut(s)	29, 341, 352, 476, 670, 1160, 1434
Alw21I	GWGCWC	4 cut(s)	31, 354, 381, 1494
Alw26I	GTCTC	3 cut(s)	157, 1254, 1470
AlwI	GGATC	3 cut(s)	107, 433, 768
Aor51HI	AGCGCT	1 cut(s)	1292
AoxI	GGCC	2 cut(s)	553, 660
ApeKI	GCWGC	2 cut(s)	122, 125
AspLEI	GCGC	6 cut(s)	64, 266, 730, 743, 1006, 1293
AspS9I	GGNCC	2 cut(s)	43, 1120
AsuC2I	CCSGG	3 cut(s)	715, 1300, 1425
AsuHPI	GGTGA	5 cut(s)	508, 962, 1288, 1423, 1571
AsuII	TTCGAA	1 cut(s)	292
AvaII	GGWCC	2 cut(s)	43, 1120
BaeGI	GKGCMC	2 cut(s)	104, 827
BalI	TGGCCA	1 cut(s)	555
BanI	GGYRCC	1 cut(s)	101
BanII	GRGCYC	2 cut(s)	31, 354
Bbv12I	GWGCWC	4 cut(s)	31, 354, 381, 1494
BbvI	GCAGC	2 cut(s)	134, 137
BccI	CCATC	3 cut(s)	93, 1051, 1550
BcgI	CGANNNNNNTGC	2 cut(s)	91, 125
BciT130I	CCWGG	2 cut(s)	520, 1116
BciVI	GTATCC	2 cut(s)	768, 1101
BclI	TGATCA	1 cut(s)	228
BcnI	CCSGG	3 cut(s)	715, 1300, 1425
BcoDI	GTCTC	3 cut(s)	157, 1254, 1470
BfaI	CTAG	2 cut(s)	198, 1169
BfoI	RGCGCY	2 cut(s)	267, 1294
BfrI	CTTAAG	1 cut(s)	1384
BfuI	GTATCC	2 cut(s)	768, 1101
BisI	GCNGC	2 cut(s)	123, 126
BlpI	GCTNAGC	1 cut(s)	348
BlsI	GCNGC	2 cut(s)	124, 127
Bme1390I	CCNGG	5 cut(s)	520, 715, 1116, 1300, 1425
Bme18I	GGWCC	2 cut(s)	43, 1120
BmgBI	CACGTC	1 cut(s)	456
BmgT120I	GGNCC	2 cut(s)	43, 1120
BmiI	GGNNCC	4 cut(s)	103, 1121, 1209, 1422
BmrFI	CCNGG	5 cut(s)	520, 715, 1116, 1300, 1425
BmrI	ACTGGG	1 cut(s)	1160
BmsI	GCATC	3 cut(s)	882, 1155, 1188
BmuI	ACTGGG	1 cut(s)	1160
BpmI	CTGGAG	2 cut(s)	340, 1494
Bpu1102I	GCTNAGC	1 cut(s)	348
Bpu14I	TTCGAA	1 cut(s)	292
BpuEI	CTTGAG	1 cut(s)	1054
BpuMI	CCSGG	3 cut(s)	715, 1300, 1425
BsaI	GGTCTC	1 cut(s)	1254
BsaJI	CCNNGG	2 cut(s)	663, 1115
Bsc4I	CCNNNNNNNGG	2 cut(s)	58, 1270
Bse1I	ACTGG	3 cut(s)	357, 1155, 1363
Bse3DI	GCAATG	2 cut(s)	135, 1232
BseBI	CCWGG	2 cut(s)	520, 1116
BseDI	CCNNGG	2 cut(s)	663, 1115
BseGI	GGATG	6 cut(s)	807, 910, 1062, 1069, 1170, 1433
BseLI	CCNNNNNNNGG	2 cut(s)	58, 1270
BseMI	GCAATG	2 cut(s)	135, 1232
BseMII	CTCAG	2 cut(s)	339, 585
BseNI	ACTGG	3 cut(s)	357, 1155, 1363
BseRI	GAGGAG	2 cut(s)	1187, 1415
BseSI	GKGCMC	2 cut(s)	104, 827
BseXI	GCAGC	2 cut(s)	134, 137
BseYI	CCCAGC	2 cut(s)	472, 1160
BsgI	GTGCAG	2 cut(s)	130, 446
BshFI	GGCC	2 cut(s)	555, 662
BshNI	GGYRCC	1 cut(s)	101
BsiHKAI	GWGCWC	4 cut(s)	31, 354, 381, 1494
BsiSI	CCGG	3 cut(s)	714, 1299, 1425
BsiWI	CGTACG	1 cut(s)	1218
BslFI	GGGAC	1 cut(s)	1382
BslI	CCNNNNNNNGG	2 cut(s)	58, 1270
BsmAI	GTCTC	3 cut(s)	157, 1254, 1470
BsmBI	CGTCTC	1 cut(s)	157
BsmFI	GGGAC	1 cut(s)	1382
BsnI	GGCC	2 cut(s)	555, 662
Bso31I	GGTCTC	1 cut(s)	1254
Bsp119I	TTCGAA	1 cut(s)	292
Bsp1286I	GDGCHC	6 cut(s)	31, 104, 354, 381, 827, 1494
Bsp1407I	TGTACA	1 cut(s)	843
Bsp143I	GATC	6 cut(s)	112, 132, 160, 228, 438, 760
Bsp1720I	GCTNAGC	1 cut(s)	348
BspACI	CCGC	3 cut(s)	297, 605, 1470
BspANI	GGCC	2 cut(s)	555, 662
BspCNI	CTCAG	2 cut(s)	340, 586
BspHI	TCATGA	1 cut(s)	225
BspLI	GGNNCC	4 cut(s)	103, 1121, 1209, 1422
BspPI	GGATC	3 cut(s)	107, 433, 768
BspT104I	TTCGAA	1 cut(s)	292
BspT107I	GGYRCC	1 cut(s)	101
BspTI	CTTAAG	1 cut(s)	1384
BspTNI	GGTCTC	1 cut(s)	1254
BsrDI	GCAATG	2 cut(s)	135, 1232
BsrGI	TGTACA	1 cut(s)	843
BsrI	ACTGG	3 cut(s)	357, 1155, 1363
BssECI	CCNNGG	2 cut(s)	663, 1115
BssMI	GATC	6 cut(s)	112, 132, 160, 228, 438, 760
BssT1I	CCWWGG	1 cut(s)	663
Bst2UI	CCWGG	2 cut(s)	520, 1116
Bst4CI	ACNGT	5 cut(s)	151, 486, 579, 817, 1319
Bst6I	CTCTTC	3 cut(s)	188, 791, 893
BstAFI	CTTAAG	1 cut(s)	1384
BstAUI	TGTACA	1 cut(s)	843
BstBI	TTCGAA	1 cut(s)	292
BstC8I	GCNNGC	5 cut(s)	339, 571, 739, 874, 1042
BstDEI	CTNAG	2 cut(s)	348, 594
BstF5I	GGATG	6 cut(s)	807, 910, 1062, 1069, 1170, 1433
BstH2I	RGCGCY	2 cut(s)	267, 1294
BstHHI	GCGC	6 cut(s)	64, 266, 730, 743, 1006, 1293
BstKTI	GATC	6 cut(s)	115, 135, 163, 231, 441, 763
BstMAI	GTCTC	3 cut(s)	157, 1254, 1470
BstMBI	GATC	6 cut(s)	112, 132, 160, 228, 438, 760
BstMWI	GCNNNNNNNGC	2 cut(s)	70, 734
BstNI	CCWGG	2 cut(s)	520, 1116
BstNSI	RCATGY	4 cut(s)	782, 844, 1331, 1490
BstSCI	CCNGG	5 cut(s)	518, 713, 1114, 1298, 1423
BstSLI	GKGCMC	2 cut(s)	104, 827
BstV1I	GCAGC	2 cut(s)	134, 137
BstXI	CCANNNNNNTGG	2 cut(s)	400, 1130
BsuI	GTATCC	2 cut(s)	768, 1101
BsuRI	GGCC	2 cut(s)	555, 662
BtrI	CACGTC	1 cut(s)	456
BtsCI	GGATG	6 cut(s)	807, 910, 1062, 1069, 1170, 1433
BtsI	GCAGTG	2 cut(s)	732, 825
BtsIMutI	CAGTG	6 cut(s)	364, 732, 822, 825, 1324, 1370
Cac8I	GCNNGC	5 cut(s)	339, 571, 739, 874, 1042
CciI	TCATGA	1 cut(s)	225
CfoI	GCGC	6 cut(s)	64, 266, 730, 743, 1006, 1293
Cfr13I	GGNCC	2 cut(s)	43, 1120
Csp6I	GTAC	3 cut(s)	813, 844, 1219
CviQI	GTAC	3 cut(s)	813, 844, 1219
DdeI	CTNAG	2 cut(s)	348, 594
DpnI	GATC	6 cut(s)	114, 134, 162, 230, 440, 762
DpnII	GATC	6 cut(s)	112, 132, 160, 228, 438, 760
DraIII	CACNNNGTG	1 cut(s)	852
DrdI	GACNNNNNNGTC	1 cut(s)	1220
DseDI	GACNNNNNNGTC	1 cut(s)	1220
EaeI	YGGCCR	1 cut(s)	553
Eam1104I	CTCTTC	3 cut(s)	188, 791, 893
EarI	CTCTTC	3 cut(s)	188, 791, 893
Ecl136II	GAGCTC	2 cut(s)	29, 352
Eco130I	CCWWGG	1 cut(s)	663
Eco147I	AGGCCT	1 cut(s)	662
Eco24I	GRGCYC	2 cut(s)	31, 354
Eco31I	GGTCTC	1 cut(s)	1254
Eco32I	GATATC	1 cut(s)	930
Eco47I	GGWCC	2 cut(s)	43, 1120
Eco47III	AGCGCT	1 cut(s)	1292
Eco53kI	GAGCTC	2 cut(s)	29, 352
Eco57I	CTGAAG	1 cut(s)	1066
EcoICRI	GAGCTC	2 cut(s)	29, 352
EcoRII	CCWGG	2 cut(s)	518, 1114
EcoRV	GATATC	1 cut(s)	930
EcoT14I	CCWWGG	1 cut(s)	663
EcoT38I	GRGCYC	2 cut(s)	31, 354
ErhI	CCWWGG	1 cut(s)	663
Esp3I	CGTCTC	1 cut(s)	157
FaqI	GGGAC	1 cut(s)	1382
FbaI	TGATCA	1 cut(s)	228
Fnu4HI	GCNGC	2 cut(s)	123, 126
FokI	GGATG	6 cut(s)	814, 917, 1069, 1076, 1177, 1440
FriOI	GRGCYC	2 cut(s)	31, 354
Fsp4HI	GCNGC	2 cut(s)	123, 126
FspBI	CTAG	2 cut(s)	198, 1169
GlaI	GCGC	6 cut(s)	63, 265, 729, 742, 1005, 1292
GluI	GCNGC	2 cut(s)	123, 126
GsaI	CCCAGC	2 cut(s)	476, 1164
GsuI	CTGGAG	2 cut(s)	340, 1494
HaeII	RGCGCY	2 cut(s)	267, 1294
HaeIII	GGCC	2 cut(s)	555, 662
HapII	CCGG	3 cut(s)	714, 1299, 1425
HhaI	GCGC	6 cut(s)	64, 266, 730, 743, 1006, 1293
Hin6I	GCGC	6 cut(s)	62, 264, 728, 741, 1004, 1291
HinP1I	GCGC	6 cut(s)	62, 264, 728, 741, 1004, 1291
HincII	GTYRAC	2 cut(s)	790, 838
HindII	GTYRAC	2 cut(s)	790, 838
HinfI	GANTC	3 cut(s)	254, 410, 1214
HpaII	CCGG	3 cut(s)	714, 1299, 1425
HphI	GGTGA	5 cut(s)	508, 962, 1288, 1423, 1571
Hpy166II	GTNNAC	5 cut(s)	482, 790, 838, 846, 1467
Hpy188I	TCNGA	4 cut(s)	157, 233, 1085, 1357
Hpy188III	TCNNGA	4 cut(s)	41, 226, 1033, 1105
Hpy8I	GTNNAC	5 cut(s)	482, 790, 838, 846, 1467
HpyAV	CCTTC	3 cut(s)	151, 762, 1384
HpyCH4III	ACNGT	5 cut(s)	151, 486, 579, 817, 1319
HpyCH4IV	ACGT	2 cut(s)	455, 1221
HpyF10VI	GCNNNNNNNGC	2 cut(s)	70, 734
HpyF3I	CTNAG	2 cut(s)	348, 594
HpySE526I	ACGT	2 cut(s)	455, 1221
HspAI	GCGC	6 cut(s)	62, 264, 728, 741, 1004, 1291
Ksp22I	TGATCA	1 cut(s)	228
Kzo9I	GATC	6 cut(s)	112, 132, 160, 228, 438, 760
LmnI	GCTCC	2 cut(s)	384, 667
Lsp1109I	GCAGC	2 cut(s)	134, 137
LweI	GCATC	3 cut(s)	882, 1155, 1188
MaeI	CTAG	2 cut(s)	198, 1169
MaeII	ACGT	2 cut(s)	455, 1221
MaeIII	GTNAC	6 cut(s)	451, 458, 514, 1015, 1189, 1375
MalI	GATC	6 cut(s)	114, 134, 162, 230, 440, 762
MboI	GATC	6 cut(s)	112, 132, 160, 228, 438, 760
MboII	GAAGA	7 cut(s)	175, 808, 910, 1000, 1072, 1195, 1325
MhlI	GDGCHC	6 cut(s)	31, 104, 354, 381, 827, 1494
MlsI	TGGCCA	1 cut(s)	555
MluCI	AATT	3 cut(s)	36, 999, 1437
MluNI	TGGCCA	1 cut(s)	555
MlyI	GAGTC	2 cut(s)	419, 1208
Mox20I	TGGCCA	1 cut(s)	555
MscI	TGGCCA	1 cut(s)	555
MseI	TTAA	4 cut(s)	534, 627, 1385, 1436
MslI	CAYNNNNRTG	5 cut(s)	387, 447, 783, 1024, 1320
Msp20I	TGGCCA	1 cut(s)	555
MspA1I	CMGCKG	1 cut(s)	1472
MspCI	CTTAAG	1 cut(s)	1384
MspI	CCGG	3 cut(s)	714, 1299, 1425
MspR9I	CCNGG	5 cut(s)	520, 715, 1116, 1300, 1425
MvaI	CCWGG	2 cut(s)	520, 1116
MwoI	GCNNNNNNNGC	2 cut(s)	70, 734
NciI	CCSGG	3 cut(s)	715, 1300, 1425
NdeII	GATC	6 cut(s)	112, 132, 160, 228, 438, 760
NlaIV	GGNNCC	4 cut(s)	103, 1121, 1209, 1422
NmuCI	GTSAC	5 cut(s)	451, 458, 514, 1189, 1375
NspI	RCATGY	4 cut(s)	782, 844, 1331, 1490
NspV	TTCGAA	1 cut(s)	292
OliI	CACNNNNGTG	1 cut(s)	1320
PagI	TCATGA	1 cut(s)	225
PceI	AGGCCT	1 cut(s)	662
PciI	ACATGT	1 cut(s)	840
PfeI	GAWTC	1 cut(s)	254
Pfl23II	CGTACG	1 cut(s)	1218
PflFI	GACNNNGTC	1 cut(s)	1373
PfoI	TCCNGGA	1 cut(s)	1423
PkrI	GCNGC	2 cut(s)	124, 127
PleI	GAGTC	2 cut(s)	418, 1208
PpsI	GAGTC	2 cut(s)	418, 1208
PscI	ACATGT	1 cut(s)	840
PsiI	TTATAA	1 cut(s)	467
Psp124BI	GAGCTC	2 cut(s)	31, 354
Psp6I	CCWGG	2 cut(s)	518, 1114
PspFI	CCCAGC	2 cut(s)	472, 1160
PspGI	CCWGG	2 cut(s)	518, 1114
PspLI	CGTACG	1 cut(s)	1218
PspN4I	GGNNCC	4 cut(s)	103, 1121, 1209, 1422
PspPI	GGNCC	2 cut(s)	43, 1120
PsyI	GACNNNGTC	1 cut(s)	1373
RsaI	GTAC	3 cut(s)	814, 845, 1220
RsaNI	GTAC	3 cut(s)	813, 844, 1219
RseI	CAYNNNNRTG	5 cut(s)	387, 447, 783, 1024, 1320
SacI	GAGCTC	2 cut(s)	31, 354
SaqAI	TTAA	4 cut(s)	534, 627, 1385, 1436
SatI	GCNGC	2 cut(s)	123, 126
Sau3AI	GATC	6 cut(s)	112, 132, 160, 228, 438, 760
Sau96I	GGNCC	2 cut(s)	43, 1120
SchI	GAGTC	2 cut(s)	419, 1208
ScrFI	CCNGG	5 cut(s)	520, 715, 1116, 1300, 1425
SduI	GDGCHC	6 cut(s)	31, 104, 354, 381, 827, 1494
SfaNI	GCATC	3 cut(s)	882, 1155, 1188
SfuI	TTCGAA	1 cut(s)	292
SinI	GGWCC	2 cut(s)	43, 1120
SmiMI	CAYNNNNRTG	5 cut(s)	387, 447, 783, 1024, 1320
SmlI	CTYRAG	2 cut(s)	1033, 1384
SmoI	CTYRAG	2 cut(s)	1033, 1384
Sse9I	AATT	3 cut(s)	36, 999, 1437
SseBI	AGGCCT	1 cut(s)	662
SsiI	CCGC	3 cut(s)	297, 605, 1470
SspMI	CTAG	2 cut(s)	198, 1169
SstI	GAGCTC	2 cut(s)	31, 354
StuI	AGGCCT	1 cut(s)	662
StyD4I	CCNGG	5 cut(s)	518, 713, 1114, 1298, 1423
StyI	CCWWGG	1 cut(s)	663
TaaI	ACNGT	5 cut(s)	151, 486, 579, 817, 1319
TaiI	ACGT	2 cut(s)	458, 1224
TaqI	TCGA	5 cut(s)	17, 111, 292, 582, 1048
TasI	AATT	3 cut(s)	36, 999, 1437
TatI	WGTACW	1 cut(s)	843
TfiI	GAWTC	1 cut(s)	254
Tru1I	TTAA	4 cut(s)	534, 627, 1385, 1436
Tru9I	TTAA	4 cut(s)	534, 627, 1385, 1436
TscAI	CASTG	6 cut(s)	364, 739, 822, 832, 1324, 1370
TseFI	GTSAC	5 cut(s)	451, 458, 514, 1189, 1375
TseI	GCWGC	2 cut(s)	122, 125
Tsp45I	GTSAC	5 cut(s)	451, 458, 514, 1189, 1375
TspDTI	ATGAA	8 cut(s)	17, 181, 267, 600, 1001, 1026, 1106, 1244
TspGWI	ACGGA	1 cut(s)	176
TspRI	CASTG	6 cut(s)	364, 739, 822, 832, 1324, 1370
Tth111I	GACNNNGTC	1 cut(s)	1373
Vha464I	CTTAAG	1 cut(s)	1384
VpaK11BI	GGWCC	2 cut(s)	43, 1120
XceI	RCATGY	4 cut(s)	782, 844, 1331, 1490
XspI	CTAG	2 cut(s)	198, 1169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.