WUSCHEL-related homeobox
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g32650 FvH4_4g32660 FvH4_5g02150 FvH4_5g02150 |
| rosa_chinensis | RchiOBHm_Chr2g0140271 RchiOBHm_Chr4g0441531 RchiOBHm_Chr4g0441541 RchiOBHm_Chr6g0282911 RchiOBHm_Chr6g0283101 |
| rosa_laevigata | RLG00000006085 RLG00000006087 RLG00000012846 RLG00000012849 RLG00000012850 RLG00000012852 RLG00000012853 RLG00000019859 |
| rosa_multiflora | Rmu_sc0000159.1_g000025 Rmu_sc0000159.1_g000041 Rmu_sc0000159.1_g000052 Rmu_sc0000353.1_g000028 Rmu_sc0005446.1_g000015 Rmu_sc0012670.1_g000016 |
| rosa_roxburghii | Rroxscaffold_2G00104940 Rroxscaffold_5G00382380 Rroxscaffold_5G00382400 |
| rosa_rugosa | Rorug02G0361700 Rorug04G0334600 Rorug04G0334700 Rorug06G0150700 Rorug06G0151300 Rorug06G0151300 |
| rosa_samantha | Rh2AG412600 Rh2BG423100 Rh2CG398800 Rh2DG432200 Rh4AG385900 Rh4BG400200 Rh4DG392700 Rh4DG392800 Rh6AG264100 Rh6BG267200 Rh6CG266000 |
| rosa_wichuraiana | Rw2G033820 Rw4G033330 Rw6G022800 Rw6G022850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 110 |
| AccIII | TCCGGA | 1 cut(s) | 188 |
| AciI | CCGC | 1 cut(s) | 30 |
| AcsI | RAATTY | 1 cut(s) | 15 |
| AcuI | CTGAAG | 2 cut(s) | 128, 149 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 110 |
| AgsI | TTSAA | 1 cut(s) | 89 |
| AluBI | AGCT | 2 cut(s) | 110, 169 |
| AluI | AGCT | 2 cut(s) | 110, 169 |
| Aor13HI | TCCGGA | 1 cut(s) | 188 |
| ApeKI | GCWGC | 1 cut(s) | 154 |
| ApoI | RAATTY | 1 cut(s) | 15 |
| BbvI | GCAGC | 1 cut(s) | 166 |
| BccI | CCATC | 3 cut(s) | 64, 138, 195 |
| BisI | GCNGC | 1 cut(s) | 155 |
| BlsI | GCNGC | 1 cut(s) | 156 |
| BsaWI | WCCGGW | 1 cut(s) | 188 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 110 |
| Bse3DI | GCAATG | 1 cut(s) | 214 |
| BseAI | TCCGGA | 1 cut(s) | 188 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 110 |
| BseMI | GCAATG | 1 cut(s) | 214 |
| BseXI | GCAGC | 1 cut(s) | 166 |
| BsiSI | CCGG | 1 cut(s) | 189 |
| BslFI | GGGAC | 1 cut(s) | 121 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 110 |
| BsmFI | GGGAC | 1 cut(s) | 121 |
| Bsp13I | TCCGGA | 1 cut(s) | 188 |
| BspACI | CCGC | 1 cut(s) | 30 |
| BspEI | TCCGGA | 1 cut(s) | 188 |
| BsrDI | GCAATG | 1 cut(s) | 214 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 160 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 160 |
| BstV1I | GCAGC | 1 cut(s) | 166 |
| CviJI | RGCY | 4 cut(s) | 74, 110, 169, 226 |
| CviKI_1 | RGCY | 4 cut(s) | 74, 110, 169, 226 |
| Eco57I | CTGAAG | 2 cut(s) | 128, 149 |
| FaiI | YATR | 4 cut(s) | 21, 119, 124, 229 |
| FaqI | GGGAC | 1 cut(s) | 121 |
| Fnu4HI | GCNGC | 1 cut(s) | 155 |
| Fsp4HI | GCNGC | 1 cut(s) | 155 |
| GluI | GCNGC | 1 cut(s) | 155 |
| HapII | CCGG | 1 cut(s) | 189 |
| HinfI | GANTC | 2 cut(s) | 181, 208 |
| HpaII | CCGG | 1 cut(s) | 189 |
| Hpy188I | TCNGA | 2 cut(s) | 69, 147 |
| Hpy188III | TCNNGA | 2 cut(s) | 89, 189 |
| HpyAV | CCTTC | 1 cut(s) | 152 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 160 |
| Kpn2I | TCCGGA | 1 cut(s) | 188 |
| LmnI | GCTCC | 1 cut(s) | 49 |
| LpnPI | CCDG | 2 cut(s) | 96, 202 |
| Lsp1109I | GCAGC | 1 cut(s) | 166 |
| MaeIII | GTNAC | 1 cut(s) | 56 |
| MboII | GAAGA | 4 cut(s) | 190, 203, 210, 217 |
| MluCI | AATT | 2 cut(s) | 15, 114 |
| MnlI | CCTC | 2 cut(s) | 85, 149 |
| MroI | TCCGGA | 1 cut(s) | 188 |
| MslI | CAYNNNNRTG | 1 cut(s) | 68 |
| MspI | CCGG | 1 cut(s) | 189 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 160 |
| NmuCI | GTSAC | 1 cut(s) | 56 |
| PfeI | GAWTC | 2 cut(s) | 181, 208 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 110 |
| PkrI | GCNGC | 1 cut(s) | 156 |
| RseI | CAYNNNNRTG | 1 cut(s) | 68 |
| SatI | GCNGC | 1 cut(s) | 155 |
| SetI | ASST | 2 cut(s) | 112, 171 |
| SgeI | CNNG | 4 cut(s) | 101, 123, 187, 201 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 68 |
| Sse9I | AATT | 2 cut(s) | 15, 114 |
| SsiI | CCGC | 1 cut(s) | 30 |
| TaqI | TCGA | 2 cut(s) | 98, 176 |
| TasI | AATT | 2 cut(s) | 15, 114 |
| TfiI | GAWTC | 2 cut(s) | 181, 208 |
| TseFI | GTSAC | 1 cut(s) | 56 |
| TseI | GCWGC | 1 cut(s) | 154 |
| Tsp45I | GTSAC | 1 cut(s) | 56 |
| TspDTI | ATGAA | 1 cut(s) | 203 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 110 |
| XapI | RAATTY | 1 cut(s) | 15 |