Rorug07G0159900

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0001799
Physical Location & Seq
Reverse (-)
12746412 .. 12753354
6943 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0159900.1

Sequence Viewer

Length: 2307 bp
ATGGGACATGGTGAGAAATCCCACCGACCCAGTAAAAAGCACAAATCGTCGGCCAAGGAAAGCATCCCTGTGGAGGACTACGAAGCCTACGTCGGCGGCGAAGAGCTCGACGATGACGTTCGCGGCGACGGTGAAGTTCAAAAGAGGGATTTTACTAAGCTGGAATTGAAACCTGACCACATGAATCGGCCTTTGTGGGCCTGCGCCGATGGTAGAATATTTCTCGAGACGTTCTCAGCTTTGTACAAGCAAGCCTATGATTTTCTCATCGCCATTGCGGAGCCGGTTTGCAGGCCAGAGTCAATGCACGAGTACAACTTGACCCCGCATTCCTTGTATGCGGCGGTGTCTGTTGGTCTGGAAACGCAAACTATCATTTCGGTTTTGGATAAGCTGTCAAAGACCAAGCTCCCCAAAGAAATGATTGATTTCATACACGGTTCTACGGCTAATTACGGCAAAGTGAAGCTTGTGCTGAAGAAGAATCGGTATTATGTTGAATCCCCATTCCCAGAGGTATTGAAGAAATTGCTCAGGGATGACGTTATATCCAAATCAAGGATTATTCCTGAGGGTGCTAATGGAAATGGTGGATTTACAATTAGCAAAACCTTGGGCGAAATTGCAGCCGATTCCAGTGGTTTGCTAAATGAAGCAGAATTGGCAGCTGCGGCTGAAGAAAAAGAAACTCACGCATTTGAAATTGATCCTTCACAGGTTGAGAAAGTAAAAGAACGTTGTTTGCCAAACGCTTTGAACTATCCCATGTTGGAGGAGTATGACTTCAGAAATGATACGGTTAACCCTGATCTTGATATGGAACTCAAGCCTCAAGCGCAACCACGACCATATCAAGAGAAGAGCTTGAGTAAAATGTTTGGAAATGGGAGAGCACGATCTGGCATTATTGTGTTACCTTGTGGTGCTGGAAAATCTCTAGTTGGTGTTTCTGCAGCCTCCCGAATAAAAAAGAGCTGCCTTTGTCTAGCAACAAATGCTGTTTCTGTTGATCAATGGGCTTTTCAGTTTAAATTGTGGTCAACCATTCGAGATGAACACATTTGTCGTTTCACATCTGATAGCAAAGAAAGATTCCGCGGAAATGCTGGGGTGGTTGTGACAACATATAACATGGTTGCGTTTGGTGGCAAGAGGTCCGAAGAATCTGAAAAGATTATTGAAGAAATAAGAAATAGAGAATGGGGATTGCTTCTCATGGATGAGGTGCACGTTGTTCCTGCTCAGATGTTTCGAAAGGTTATCGCCATTACCAAATCACACTGCAAGCTTGGACTGACCGCCACGCTTGTGAGAGAGGATGAGAGGATCACAGATCTGAATTTCCTAATTGGTCCCAAATTGTATGAAGCAAACTGGCTGGATTTGGTAAAAGGTGGATTTATTGCAAATGTACAGTGTGCTGAAGTATGGTGTCCAATGACGAAGGAGTTCTTTGCAGAATATTTGAAGAAAGAGAACTCCAAGAAAAAGCAGGCACTTTATGTGATGAATCCGAATAAGTTTAGGGCTTGTGAGTTTCTTATACGGTTTCATGAACAGCAACGTGGTGATAAAATTATCGTCTTTGCTGACAATCTCTTTGCTCTCACGGAGTATGCAATGAAACTTCGGAAACCTATGATCTATGGAGCTACCAGCCATGTTGAGAGGACAAAGATCTTAGAAGCCTTCAAAACAAGTCGGGACGTAAATACTGTATTCTTGTCAAAGGTGGGAGATAATTCTATTGACATTCCTGAGGCAAATGTGATAATTCAGATATCATCACATGCTGGTTCAAGACGTCAAGAAGCACAGCGTCTTGGTCGTATTCTGAGGGCCAAGGGTAAACTTCGGGATCGGATGGCAGGAGGTAAAGAGGAGTATAATGCATTCTTTTATTCTCTCGTGTCAACTGATACACAGGAGATGTACTATTCAACTAAACGACAACAGTTTTTGATTGATCAAGGGTATAGTTTTAAGGTTATTACAAGCTTGCCTCCACCTGATTCAGGAGCTGATTTGAGCTACCACCGTCTTGATGAGCAATTGCACCTACTCACAAAGGTGTTAACTGCTGGTGACGATGCTGTTGGCTTAGAGCAACTAGATGAAGATGTGGATGACATTGCCCTTCTTAAATCACGTCGTTTCTCTGGATCCATGAGTGCGATGTCGGGTGCCAATGGGATGGTTTACATGGAATATAGTACTGGGAAAAACAAAAATGGCAAAGGACAGATGAAGAGTAAGCCCAAGGATCCGGCCAAGAGACATCATTTGTTTAAAAAGCGCTTTGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

768

Amino Acids

86.67

Weight (kDa)

8.62

Isoelectric Point (pI)

33.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Helicase_C_3 PF13625 65 - 187 2e-33 Helicase conserved C-terminal domain
ResIII PF04851 280 - 437 1.1e-17 Type III restriction enzyme, res subunit
ERCC3_RAD25_C PF16203 462 - 708 2.5e-116 ERCC3/RAD25/XPB C-terminal helicase
Helicase_C PF00271 512 - 614 1.2e-12 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1807
AccB1I GGYRCC 1 cut(s) 2183
AccII CGCG 2 cut(s) 123, 1098
AclI AACGTT 1 cut(s) 736
AclWI GGATC 7 cut(s) 701, 1334, 1866, 2157, 2170, 2258, 2271
AcoI YGGCCR 2 cut(s) 51, 2268
AcsI RAATTY 1 cut(s) 1339
AcuI CTGAAG 4 cut(s) 497, 696, 769, 1443
AcyI GRCGYC 1 cut(s) 1804
AfaI GTAC 5 cut(s) 245, 314, 1413, 1934, 2215
AfeI AGCGCT 1 cut(s) 2297
AfiI CCNNNNNNNGG 3 cut(s) 73, 558, 2015
AjiI CACGTC 1 cut(s) 2150
AleI CACNNNNGTG 2 cut(s) 1307, 2069
Alw21I GWGCWC 3 cut(s) 108, 895, 1230
Alw26I GTCTC 2 cut(s) 221, 2269
Alw44I GTGCAC 1 cut(s) 1226
AlwI GGATC 7 cut(s) 701, 1334, 1866, 2157, 2170, 2258, 2271
AlwNI CAGNNNCTG 1 cut(s) 2021
Ama87I CYCGRG 1 cut(s) 224
Aor51HI AGCGCT 1 cut(s) 2297
AoxI GGCC 6 cut(s) 51, 188, 198, 293, 1839, 2268
ApaLI GTGCAC 1 cut(s) 1226
ApeKI GCWGC 5 cut(s) 626, 665, 668, 953, 975
ApoI RAATTY 1 cut(s) 1339
ArsI GACNNNNNNTTYG 4 cut(s) 75, 107, 1583, 1615
Asp700I GAANNNNTTC 1 cut(s) 1448
AspLEI GCGC 3 cut(s) 206, 838, 2298
AspS9I GGNCC 4 cut(s) 198, 1155, 1352, 1839
AsuHPI GGTGA 4 cut(s) 23, 143, 1580, 2096
AsuII TTCGAA 1 cut(s) 1252
AvaI CYCGRG 1 cut(s) 224
AvaII GGWCC 2 cut(s) 1155, 1352
AxyI CCTNAGG 2 cut(s) 570, 1758
BaeGI GKGCMC 1 cut(s) 1230
BamHI GGATCC 2 cut(s) 2162, 2263
BanI GGYRCC 1 cut(s) 2183
BanII GRGCYC 1 cut(s) 108
BauI CACGAG 2 cut(s) 308, 1907
Bbv12I GWGCWC 3 cut(s) 108, 895, 1230
BbvI GCAGC 5 cut(s) 638, 655, 677, 962, 965
BccI CCATC 3 cut(s) 203, 1858, 2188
BceAI ACGGC 2 cut(s) 462, 472
BclI TGATCA 2 cut(s) 1009, 1966
BcoDI GTCTC 2 cut(s) 221, 2269
BfaI CTAG 3 cut(s) 938, 986, 2111
BfmI CTRYAG 1 cut(s) 951
BfoI RGCGCY 1 cut(s) 2299
BglII AGATCT 2 cut(s) 1333, 1677
BisI GCNGC 9 cut(s) 97, 124, 342, 627, 666, 669, 672, 954, 976
BlsI GCNGC 9 cut(s) 98, 125, 343, 628, 667, 670, 673, 955, 977
BmcAI AGTACT 1 cut(s) 2215
Bme18I GGWCC 2 cut(s) 1155, 1352
BmeT110I CYCGRG 1 cut(s) 224
BmgBI CACGTC 1 cut(s) 2150
BmgT120I GGNCC 4 cut(s) 198, 1155, 1352, 1839
BmiI GGNNCC 5 cut(s) 282, 1354, 2164, 2185, 2265
BmrI ACTGGG 2 cut(s) 24, 2226
BmsI GCATC 2 cut(s) 72, 2080
BmuI ACTGGG 2 cut(s) 24, 2226
BplI GAGNNNNNCTC 2 cut(s) 218, 250
Bpu10I CCTNAGC 1 cut(s) 533
Bpu14I TTCGAA 1 cut(s) 1252
BpuEI CTTGAG 3 cut(s) 809, 816, 886
BsaHI GRCGYC 1 cut(s) 1804
BsaJI CCNNGG 5 cut(s) 54, 612, 1096, 1842, 2259
Bsc4I CCNNNNNNNGG 3 cut(s) 73, 558, 2015
Bse118I RCCGGY 1 cut(s) 283
Bse1I ACTGG 4 cut(s) 30, 636, 1379, 2221
Bse21I CCTNAGG 2 cut(s) 570, 1758
Bse3DI GCAATG 3 cut(s) 273, 1626, 2130
BseDI CCNNGG 5 cut(s) 54, 612, 1096, 1842, 2259
BseGI GGATG 7 cut(s) 63, 544, 1225, 1324, 1869, 2131, 2199
BseLI CCNNNNNNNGG 3 cut(s) 73, 558, 2015
BseMI GCAATG 3 cut(s) 273, 1626, 2130
BseMII CTCAG 6 cut(s) 249, 547, 561, 1256, 1749, 1826
BseNI ACTGG 4 cut(s) 30, 636, 1379, 2221
BseRI GAGGAG 2 cut(s) 788, 1895
BseSI GKGCMC 1 cut(s) 1230
BseXI GCAGC 5 cut(s) 638, 655, 677, 962, 965
BseYI CCCAGC 1 cut(s) 1106
Bsh1236I CGCG 2 cut(s) 123, 1098
BshFI GGCC 6 cut(s) 53, 190, 200, 295, 1841, 2270
BshNI GGYRCC 1 cut(s) 2183
BsiHKAI GWGCWC 3 cut(s) 108, 895, 1230
BsiHKCI CYCGRG 1 cut(s) 224
BsiSI CCGG 2 cut(s) 284, 2267
BslFI GGGAC 3 cut(s) 18, 1338, 1718
BslI CCNNNNNNNGG 3 cut(s) 73, 558, 2015
BsmAI GTCTC 2 cut(s) 221, 2269
BsmBI CGTCTC 1 cut(s) 221
BsmFI GGGAC 3 cut(s) 18, 1338, 1718
BsmI GAATGC 2 cut(s) 328, 1892
BsnI GGCC 6 cut(s) 53, 190, 200, 295, 1841, 2270
BsoBI CYCGRG 1 cut(s) 224
Bsp119I TTCGAA 1 cut(s) 1252
Bsp1286I GDGCHC 3 cut(s) 108, 895, 1230
Bsp1407I TGTACA 2 cut(s) 243, 1411
BspANI GGCC 6 cut(s) 53, 190, 200, 295, 1841, 2270
BspCNI CTCAG 6 cut(s) 248, 546, 562, 1255, 1750, 1827
BspFNI CGCG 2 cut(s) 123, 1098
BspHI TCATGA 1 cut(s) 1552
BspLI GGNNCC 5 cut(s) 282, 1354, 2164, 2185, 2265
BspMAI CTGCAG 1 cut(s) 955
BspPI GGATC 7 cut(s) 701, 1334, 1866, 2157, 2170, 2258, 2271
BspQI GCTCTTC 2 cut(s) 96, 854
BspT104I TTCGAA 1 cut(s) 1252
BspT107I GGYRCC 1 cut(s) 2183
BsrDI GCAATG 3 cut(s) 273, 1626, 2130
BsrFI RCCGGY 1 cut(s) 283
BsrGI TGTACA 2 cut(s) 243, 1411
BsrI ACTGG 4 cut(s) 30, 636, 1379, 2221
BssAI RCCGGY 1 cut(s) 283
BssECI CCNNGG 5 cut(s) 54, 612, 1096, 1842, 2259
BssNI GRCGYC 1 cut(s) 1804
BssSI CACGAG 2 cut(s) 308, 1907
BssT1I CCWWGG 4 cut(s) 54, 612, 1842, 2259
Bst2BI CACGAG 2 cut(s) 308, 1907
Bst4CI ACNGT 8 cut(s) 131, 440, 799, 1416, 1548, 1717, 1956, 2039
Bst6I CTCTTC 3 cut(s) 96, 854, 2243
BstACI GRCGYC 1 cut(s) 1804
BstAPI GCANNNNNTGC 1 cut(s) 995
BstAUI TGTACA 2 cut(s) 243, 1411
BstBI TTCGAA 1 cut(s) 1252
BstC8I GCNNGC 6 cut(s) 202, 252, 293, 1286, 1494, 2000
BstDEI CTNAG 9 cut(s) 156, 235, 533, 570, 1242, 1681, 1758, 1835, 2101
BstDSI CCRYGG 1 cut(s) 1096
BstENI CCTNNNNNAGG 1 cut(s) 2013
BstF5I GGATG 7 cut(s) 63, 544, 1225, 1324, 1869, 2131, 2199
BstFNI CGCG 2 cut(s) 123, 1098
BstH2I RGCGCY 1 cut(s) 2299
BstHHI GCGC 3 cut(s) 206, 838, 2298
BstMAI GTCTC 2 cut(s) 221, 2269
BstMWI GCNNNNNNNGC 4 cut(s) 662, 671, 835, 995
BstNSI RCATGY 1 cut(s) 1793
BstSFI CTRYAG 1 cut(s) 951
BstSLI GKGCMC 1 cut(s) 1230
BstUI CGCG 2 cut(s) 123, 1098
BstV1I GCAGC 5 cut(s) 638, 655, 677, 962, 965
BstX2I RGATCY 4 cut(s) 1333, 1677, 2162, 2263
BstXI CCANNNNNNTGG 1 cut(s) 2194
BstYI RGATCY 4 cut(s) 1333, 1677, 2162, 2263
Bsu36I CCTNAGG 2 cut(s) 570, 1758
BsuRI GGCC 6 cut(s) 53, 190, 200, 295, 1841, 2270
BtgI CCRYGG 1 cut(s) 1096
BtgZI GCGATG 2 cut(s) 253, 2189
BtrI CACGTC 1 cut(s) 2150
BtsCI GGATG 7 cut(s) 63, 544, 1225, 1324, 1869, 2131, 2199
BtsI GCAGTG 1 cut(s) 1279
BtsIMutI CAGTG 3 cut(s) 643, 1279, 1421
Cac8I GCNNGC 6 cut(s) 202, 252, 293, 1286, 1494, 2000
CaiI CAGNNNCTG 1 cut(s) 2021
CciI TCATGA 1 cut(s) 1552
CfoI GCGC 3 cut(s) 206, 838, 2298
Cfr10I RCCGGY 1 cut(s) 283
Cfr13I GGNCC 4 cut(s) 198, 1155, 1352, 1839
Cfr42I CCGCGG 1 cut(s) 1099
CseI GACGC 1 cut(s) 1808
Csp6I GTAC 5 cut(s) 244, 313, 1412, 1933, 2214
CviQI GTAC 5 cut(s) 244, 313, 1412, 1933, 2214
DdeI CTNAG 9 cut(s) 156, 235, 533, 570, 1242, 1681, 1758, 1835, 2101
DraI TTTAAA 2 cut(s) 1030, 2290
EaeI YGGCCR 2 cut(s) 51, 2268
Eam1104I CTCTTC 3 cut(s) 96, 854, 2243
EarI CTCTTC 3 cut(s) 96, 854, 2243
Ecl136II GAGCTC 1 cut(s) 106
Eco130I CCWWGG 4 cut(s) 54, 612, 1842, 2259
Eco24I GRGCYC 1 cut(s) 108
Eco32I GATATC 1 cut(s) 1782
Eco47I GGWCC 2 cut(s) 1155, 1352
Eco47III AGCGCT 1 cut(s) 2297
Eco53kI GAGCTC 1 cut(s) 106
Eco57I CTGAAG 4 cut(s) 497, 696, 769, 1443
Eco81I CCTNAGG 2 cut(s) 570, 1758
Eco88I CYCGRG 1 cut(s) 224
EcoICRI GAGCTC 1 cut(s) 106
EcoNI CCTNNNNNAGG 1 cut(s) 2013
EcoRV GATATC 1 cut(s) 1782
EcoT14I CCWWGG 4 cut(s) 54, 612, 1842, 2259
EcoT22I ATGCAT 1 cut(s) 1894
EcoT38I GRGCYC 1 cut(s) 108
ErhI CCWWGG 4 cut(s) 54, 612, 1842, 2259
Esp3I CGTCTC 1 cut(s) 221
FalI AAGNNNNNCTT 4 cut(s) 453, 485, 1436, 1468
FaqI GGGAC 3 cut(s) 18, 1338, 1718
FauI CCCGC 1 cut(s) 333
FbaI TGATCA 2 cut(s) 1009, 1966
Fnu4HI GCNGC 9 cut(s) 97, 124, 342, 627, 666, 669, 672, 954, 976
FokI GGATG 7 cut(s) 50, 551, 1232, 1331, 1876, 2138, 2206
FriOI GRGCYC 1 cut(s) 108
Fsp4HI GCNGC 9 cut(s) 97, 124, 342, 627, 666, 669, 672, 954, 976
FspBI CTAG 3 cut(s) 938, 986, 2111
GlaI GCGC 3 cut(s) 205, 837, 2297
GluI GCNGC 9 cut(s) 97, 124, 342, 627, 666, 669, 672, 954, 976
GsaI CCCAGC 1 cut(s) 1110
HaeII RGCGCY 1 cut(s) 2299
HaeIII GGCC 6 cut(s) 53, 190, 200, 295, 1841, 2270
HapII CCGG 2 cut(s) 284, 2267
HgaI GACGC 1 cut(s) 1808
HhaI GCGC 3 cut(s) 206, 838, 2298
Hin1I GRCGYC 1 cut(s) 1804
Hin6I GCGC 3 cut(s) 204, 836, 2296
HinP1I GCGC 3 cut(s) 204, 836, 2296
HincII GTYRAC 4 cut(s) 802, 1041, 1914, 2076
HindII GTYRAC 4 cut(s) 802, 1041, 1914, 2076
HindIII AAGCTT 3 cut(s) 467, 1286, 1996
HinfI GANTC 9 cut(s) 184, 299, 484, 500, 632, 1092, 1163, 1510, 2012
HpaI GTTAAC 2 cut(s) 802, 2076
HpaII CCGG 2 cut(s) 284, 2267
HphI GGTGA 4 cut(s) 23, 143, 1580, 2096
Hpy166II GTNNAC 7 cut(s) 802, 1041, 1228, 1850, 1914, 2076, 2200
Hpy8I GTNNAC 7 cut(s) 802, 1041, 1228, 1850, 1914, 2076, 2200
Hpy99I CGWCG 5 cut(s) 52, 95, 113, 131, 2154
HpyAV CCTTC 4 cut(s) 720, 1438, 1699, 2147
HpyCH4III ACNGT 8 cut(s) 131, 440, 799, 1416, 1548, 1717, 1956, 2039
HpyF10VI GCNNNNNNNGC 4 cut(s) 662, 671, 835, 995
HpyF3I CTNAG 9 cut(s) 156, 235, 533, 570, 1242, 1681, 1758, 1835, 2101
Hsp92I GRCGYC 1 cut(s) 1804
HspAI GCGC 3 cut(s) 204, 836, 2296
Ksp22I TGATCA 2 cut(s) 1009, 1966
KspAI GTTAAC 2 cut(s) 802, 2076
KspI CCGCGG 1 cut(s) 1099
LguI GCTCTTC 2 cut(s) 96, 854
LmnI GCTCC 4 cut(s) 280, 414, 1649, 2018
Lsp1109I GCAGC 5 cut(s) 638, 655, 677, 962, 965
LweI GCATC 2 cut(s) 72, 2080
MaeI CTAG 3 cut(s) 938, 986, 2111
MaeIII GTNAC 3 cut(s) 912, 1117, 2084
MfeI CAATTG 1 cut(s) 2051
MflI RGATCY 4 cut(s) 1333, 1677, 2162, 2263
MhlI GDGCHC 3 cut(s) 108, 895, 1230
MlyI GAGTC 1 cut(s) 308
MmeI TCCRAC 1 cut(s) 750
Mph1103I ATGCAT 1 cut(s) 1894
MroXI GAANNNNTTC 1 cut(s) 1448
MseI TTAA 6 cut(s) 801, 1029, 1983, 2075, 2142, 2289
MslI CAYNNNNRTG 4 cut(s) 68, 908, 1307, 2069
MspA1I CMGCKG 2 cut(s) 668, 1098
MspI CCGG 2 cut(s) 284, 2267
MunI CAATTG 1 cut(s) 2051
Mva1269I GAATGC 2 cut(s) 328, 1892
MvnI CGCG 2 cut(s) 123, 1098
MwoI GCNNNNNNNGC 4 cut(s) 662, 671, 835, 995
NlaIV GGNNCC 5 cut(s) 282, 1354, 2164, 2185, 2265
NmuCI GTSAC 2 cut(s) 1117, 2084
NsiI ATGCAT 1 cut(s) 1894
NspI RCATGY 1 cut(s) 1793
NspV TTCGAA 1 cut(s) 1252
OliI CACNNNNGTG 2 cut(s) 1307, 2069
PaeR7I CTCGAG 1 cut(s) 224
PagI TCATGA 1 cut(s) 1552
PciSI GCTCTTC 2 cut(s) 96, 854
PcsI WCGNNNNNNNCGW 4 cut(s) 87, 96, 114, 123
PctI GAATGC 2 cut(s) 328, 1892
PdmI GAANNNNTTC 1 cut(s) 1448
PfeI GAWTC 8 cut(s) 184, 484, 500, 632, 1092, 1163, 1510, 2012
PkrI GCNGC 9 cut(s) 98, 125, 343, 628, 667, 670, 673, 955, 977
PleI GAGTC 1 cut(s) 307
PpsI GAGTC 1 cut(s) 307
Psp124BI GAGCTC 1 cut(s) 108
Psp1406I AACGTT 1 cut(s) 736
PspFI CCCAGC 1 cut(s) 1106
PspN4I GGNNCC 5 cut(s) 282, 1354, 2164, 2185, 2265
PspPI GGNCC 4 cut(s) 198, 1155, 1352, 1839
PstI CTGCAG 1 cut(s) 955
PstNI CAGNNNCTG 1 cut(s) 2021
PsuI RGATCY 4 cut(s) 1333, 1677, 2162, 2263
PvuII CAGCTG 1 cut(s) 668
RsaI GTAC 5 cut(s) 245, 314, 1413, 1934, 2215
RsaNI GTAC 5 cut(s) 244, 313, 1412, 1933, 2214
RseI CAYNNNNRTG 4 cut(s) 68, 908, 1307, 2069
SacI GAGCTC 1 cut(s) 108
SacII CCGCGG 1 cut(s) 1099
SapI GCTCTTC 2 cut(s) 96, 854
SaqAI TTAA 6 cut(s) 801, 1029, 1983, 2075, 2142, 2289
SatI GCNGC 9 cut(s) 97, 124, 342, 627, 666, 669, 672, 954, 976
Sau96I GGNCC 4 cut(s) 198, 1155, 1352, 1839
ScaI AGTACT 1 cut(s) 2215
SchI GAGTC 1 cut(s) 308
SduI GDGCHC 3 cut(s) 108, 895, 1230
SfaNI GCATC 2 cut(s) 72, 2080
SfcI CTRYAG 1 cut(s) 951
Sfr274I CTCGAG 1 cut(s) 224
Sfr303I CCGCGG 1 cut(s) 1099
SfuI TTCGAA 1 cut(s) 1252
SgrBI CCGCGG 1 cut(s) 1099
SinI GGWCC 2 cut(s) 1155, 1352
SlaI CTCGAG 1 cut(s) 224
SmiMI CAYNNNNRTG 4 cut(s) 68, 908, 1307, 2069
SmlI CTYRAG 4 cut(s) 224, 824, 831, 865
SmoI CTYRAG 4 cut(s) 224, 824, 831, 865
SspI AATATT 2 cut(s) 219, 1463
SspMI CTAG 3 cut(s) 938, 986, 2111
SstI GAGCTC 1 cut(s) 108
StyI CCWWGG 4 cut(s) 54, 612, 1842, 2259
TaaI ACNGT 8 cut(s) 131, 440, 799, 1416, 1548, 1717, 1956, 2039
TaqI TCGA 4 cut(s) 108, 225, 1048, 1252
TatI WGTACW 5 cut(s) 243, 312, 1411, 1932, 2213
TauI GCSGC 4 cut(s) 99, 126, 344, 674
TfiI GAWTC 8 cut(s) 184, 484, 500, 632, 1092, 1163, 1510, 2012
Tru1I TTAA 6 cut(s) 801, 1029, 1983, 2075, 2142, 2289
Tru9I TTAA 6 cut(s) 801, 1029, 1983, 2075, 2142, 2289
TscAI CASTG 3 cut(s) 643, 1286, 1421
TseFI GTSAC 2 cut(s) 1117, 2084
TseI GCWGC 5 cut(s) 626, 665, 668, 953, 975
Tsp45I GTSAC 2 cut(s) 1117, 2084
TspGWI ACGGA 1 cut(s) 1625
TspRI CASTG 3 cut(s) 643, 1286, 1421
VneI GTGCAC 1 cut(s) 1226
VpaK11BI GGWCC 2 cut(s) 1155, 1352
XagI CCTNNNNNAGG 1 cut(s) 2013
XapI RAATTY 1 cut(s) 1339
XceI RCATGY 1 cut(s) 1793
XhoI CTCGAG 1 cut(s) 224
XmnI GAANNNNTTC 1 cut(s) 1448
XspI CTAG 3 cut(s) 938, 986, 2111
ZraI GACGTC 1 cut(s) 1805
ZrmI AGTACT 1 cut(s) 2215
Zsp2I ATGCAT 1 cut(s) 1894
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.