Rorug07G0050100

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
3577616 .. 3587302
9687 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0050100.1

Sequence Viewer

Length: 5568 bp
ATGCCTGGAAACGAAGTTGGAGACAGGGTCCACAATTTCTTTGGCCAAGAGAACTTGTCACAGGGTCAGCGTCATCCGCAGGCCACTGACGGGAACTGGCCTGGTCTAAGTAACAATTTGTGGGTTGGGAACCAGAGACAAGTTGGATCTCCTGTTAACTCAAGTTTAAAGAGTTACAATATACAACCAGCAGATTCTGAGAGAGGGCATGGGAGTCCGTCTTTGCATGTGCCTCATGGTTTGAATTTTATGCAATCAAATTTGAGGCCGGAGTTTGGCAGAGTTCAGTATCAAAGTCAGCAGCCAACTGCAAATGGCTATATGCATGGGCATCAGATGTTCCAGACAAGGCCGAATGAAGCTAACTTTTTGGGAGTGGATACAGAGTCTGATAAGCAAAATTTAACATCTAGAGGCTTGTCTACACCTGAATCACGAGGAAGTGGTCCTGATCATGCTAAAAAGAATTCAGCGAGATTGGAAACTTCAGAATCTCCTGTTGGTTTTGATTTTTTTGGTGGTCAACAGCAAATGAGTGGTCAGCATCTCAGCATGATGCAGTCTTCGCCAAGGCAACAGCAACCACGTATTAGTGACATGCAGCTACAAAGACAGGCAATGTTCACACAAATGCAAGAATTTCAAAGGCAGCAACAACTTCAACAACTAGAAAGGCAACAGCTGGTTTTGGCAAATCAAGCTTCCTCCATTGCAAAACAGGCTGCTGGTAACCACTCACCAACCCTGATGAATGGTGTCACAATCAACGAGGCATCCAACAATCAATGGCCACCTAATGTTGTGGCAGGCAACACAAACTGGCTGCAGCGTGGTGCTTCCCCTGTTATGCAGGGGGGATCTAGTGGACATGTATTGTCCCATGAACAAGCCCAGGCACTGCGCTTGATGGGCTTTGTCCCTCAACAGGCTGATCAATCTCTATATGGTGTTCCAATTTCTAGCTCAAGTGGAACACCAGGTTCATATCCTCATTTTCAAATGGATAAACCGGCAATGCAGCAGATATCGGTCAGTCGTAATTCATTTCCAGGTAATCAGTATGCTGCATTTTCAGGTCCAGTTAGCATGCAAGAGGGATCTCTGGCTTCTAGACAGGATTTTCAAGGGAAAAGTATGGTTGGGCCTACTGCTGCTCAAAGTTTGAGCAGTGGGTTCAATTTGGAAACATTGCATCGAGTAAATCCCCAACAAAGAAATGAACCCATGGAGGAATTCCAAGGGAGGCAAGAACTAGTTGGATTGTTAGAACCATCACCAGAGAAAGCATTTGGGCAGGTTGCACCCTCACAGGGTGTGGCTACCCTAGATCCAACTGAAGAAAAGATTTTGTTTGGTTCAGATGATAATCTTTGGGATGCCTTTGGGAGGAGCGCCAATGTGGGAATGGGAGGTTCTAGTATGCTGGATGGTGCAGATATTTTTGGTGGACTTTCTTCTGTACAAAGTGGAACATGGAGTGCTCTTATGCAGTCTGCTGTTGCAGAAACATCTAGTGTTGATGGAGGGATACAGGAAGAGTGGTGTGGTTCTAGTTTTCGAAATCCAGAACCTCCAGTTGGGACTCAGCAGCCCTCAAGTGTCGGTGATACTAACAAACAACAATCTGGTTGGGCTGGTAACAACTTGCATTCATTGTCTGACTTGAATTCTAGACCCTCCTCACACTTTGCTGATGCCAATAGGCCCAGTATCAGTGGTAGTTTTTCTAGTATTCAGGGATTTCAGCAATCAGGATCTAAAACTGTGCATGAAAGAGGAGACGTTTTTCAGACTGATTCTTCTCACAGGTTTATTTCACAGAGTCCTGAACAAGGAAGTAAATGGTTGGATCACAACCCTCCACCACAGCCACCCGCAGACGGTAGTCATGACAACTATGGAACCATTAGTCATTTGTCAGGTAGAGAGATAAATGCAAATAGCATTTCAGGTTCTTGGAACCGTCAAGAAAGAAGTTCTTCGCATAATAATGATAACCAGCCAAACAATATGTCAAATGGGTGGAATTTTACTGAATCTGTGTCAACAGATGGGGGTAATAATCTGAAAAATCATGGGAATCAAATCTTATCAAGATCTGCTGAAGGTGGTGATCTGAAGAGAGGCATGCATGAGGAAATAAGCTGTGCTGCTGGTATGTGGAAGACTGATTCTGCTCCAAACTCAAATGTTGAAGTGGCACATCCAAAATATGCAAGCCCGCAAATCAGTAGAGAGGGTTCAAGTATAAACAACGCTCCTAAATCAAATTCCAGCGCTGGAAGAGCCTACCAAGAAGGCCAGCAACATCTTGCAAACAGTCACGATTTCTGGACACCTGTTGATTCTTTAGTGAACTCTAAAGGAGGAGAGGCTCTGGGAAAAAATCAGCATCATCTGGACAAGAACCACCTGATTTTGGAGTCATCCGGGAACAATTGCTTAGACAAAGGAGTAGTTGAAATGCATGATATGGAGAACAACAATACAAAAGAGAATTCTAGTGATACTTTTTACCATAATGCATATCACCATGCTTCCACTGGGAGTATGAATGAAAATGTCGTCTCAGATGCTGGTGATTCACGTACTTTACCTGGAAGCAAACAACACTCATCTGGCAATGCTGGTCGCAAGCCCTCTGCAACTCGCAAGTTTCAGTATCATCCGATGGGGGATGTTGGTGTTAAAGTGGAACCTTCATCTGGAAGAAAACACGTGACACATTCACAAGCTATGACCCAGCAGGTCTCTCGAGGATTCAAAAGTCATGAACAAGGGAGTTTTGGGCAGTCAAAATTTATGGGTCACACTGATAGAAGTTCTATGGAAATTGAAAAGGTTAACATAAGAGGTTCGGATGAGCCACCTTCAAAAAGCATGCTTCCAGGTTATGCCCCAAGTACGTCTACTCCCTTTGACAGATCTACTGGTAATAATAACACCTCAAAAAAGGCTGCACAACCATCAAGTCAACATATGCTTGAGCTTCTTCACAAGGTGGACCAACCAAGGGAGCATGGTAATGCTACTCACTTCAGCCCTTCTGATCACAACACGTCATCTGAGATGCCTGAAGTGGAAACTTCTGATGGATCTGTAGGTCACATTCAAAGAAATCAATCATCTGTCTCTCAAGGTTTTGGTTTACAGCTGGCTCCTCCATCTCAACGGATTCCACTTGCAGACCATGCCCTGTCTTCTCAGAGTTCCTCACAAGCAGTTCTGGGTTCAGGTCGTGTCCATTCTGAGATGGGAGAAAAAGGTCATACGTGGTTGGCCTCAACAGCATCTGTTCAGTCCTTGCCATCCTCTCATGAAGCATCTCAAGGGGAATTAAGAAATAGTCTCCCTGGTAGCTCAGGGCAAACAGGGAATAAGGCCCTGGCCCCACAATACCATATTCATGGAGGTTTATCTGCATCTTCCGAATATGGTTTTCCTCATTCAAGAAGTCAACGAGAAAATCAGCACATGACTGCTGCAAGTGGCCAAGTAACTGCAAGCCAGTCTGTTAATATACCTTTTGATAGGCTTGCATTTCGTCCGCAACAGTTGGGTGAATCTTTTGAGAGAGCTCAAACTAGTCAATCTCCTCTGACAGATAAATCTGAAAGTGCTTCACAGGATAACCTTACTTCTGCAGAGGCATCACGCGTGAATATTGCTGACCAGTCCCGTTCAAGAGTTGCTGCCCCAAAAATCCCAGAATCAGATGCCGAGCCTTCTGTTACGTCTGGTATGTCCCATCAAGGTGCAGTTCCTAAAGTCTTGACCAATGTGTGGACCAGCGTTCCATTTCAGCAACCTCTAGTAAGTGCTGAACCTTCCAAGGCTTCATCTCAGTTGTTTAAATCCCAGCTTCAAACAAATAATCATTTGGTAAAAAATTTCCATGGTTCACCAAAGCTCAATGAGCAAGATACCCGGGAAAGAGGGAATGGCTTCTCTGCATTTGGTGTATATAGTTCAAACTTGCAAAGCTCTGGTCCAAAAGAGCAGCCATCCAAACAAAACACCGGGCAACAAGTATCACCGGAGAACATTCAGACTGCCCAAAAGACCAATGTATCACAAGGAAAAGAATCCACTGCAAATAATTATATTGAGGCATCTGCTTCAAACTCTGCTGCTACCCAGAGAGATATTGAAGCTTTCGGCCGTTCTTTAAAGCCAAATATCAGTTCCCATCAAAGTTATTCCCTGCTGAACCAAGTACAGGCTATGAAAAGTACAGAGATTGATGGAAGTGATCATAGTGTGAAGAGATTGAGAGGTCCAGATTCTGGTGCAGAGACTCAGCAGGTGAGTCCCCAGGGAGGACCGCAATTATCTTATGGATATAATACTATGTTAAGGGATTCATCAGCTGATCATACCCCAGTACCTTCCGGAGATTCTAAAATGCTGAGCTTTGCATCCAAACTTGGGGATACTCGACTTTCAAATGCATCTGGTCAGGATATGTATGCATTTAGCCGGAAGAATTCTCAGAATTTCTCTAGTGGTAGTAATGCATCTTCTCTTAGAGGTGAACAGTCTCAAGTTAGTCCGCAAATGGCGCCATCCTGGTTTGACCAATATGGAACCTTTAAAAATGGGCAAATATTGCCAATGCATGATACACTTAGAGCCACTTTGAAGTCTATGGAGCAACCTTCCATTGCTGGAAAGCCAGGTGATCTGCATGCTCGTGAACAGATGGAGGAACCCCTTGCTACTTCTGATGCTAGTACTATCCCACAGAGTTCAGCTCTGAAACCTATTTCCAGTGAGCAACTAACATCCCCTCATTTACTGCATCCTGATGCAACTGATGAAAGTTTAACTGTTGAGAGACCAAAGAAGCGTAAAAGTGCTACATCTGAACTTTCACCTTGGCATAAAGAGCTGACCAAGGTTTCCCAAAGGCTTCTAAATATGAGAGCGGCAGATGTAGAGTGGGCTCAAGCAACGAACCGACTGGCGGAGAAGGTGGAAGATGAAAGTGAAATGATTGAAGATAGACCACCGATGTTTAGGTCCAAAAAGAGGCTTATCTTGACAACACAGCTTGTGCAACAATTGCTTCGGCCTCCTCCTTCAGCAGTTCTCTCTGCAGATGCAAGCTCTTCCTTTGAGAGTGTAGCTTATTTTGCTTCTAGACTATCACTAGGTGATGCCTGCAGTGCAATCGCCTTCTCTAGAAATGATATTCAGACCCCATCACCTCCTGACCGTGCAAACCATTTGCCTGAGAAGCTTAAAACACCTGAGAGAGTTCATCGGTACTTCCCAAAAGTTGTGGAAGACTTTGTTGAAAAAGCAAGGAAGCTGGAAAATGATCTGTTGAGACTGGACAAGAGAACCTCCATCTTAGACTTGAGAGTGGACAGCCAGGATCTGGAGAAGTTTTCTGTCATCAATCGTTTTGCTAAGTTCCATGGGCGGGCACAAGGTGATGGGGCTGAGGCCTCCTCATCATCCGATATTCCTGCGAATGCTCAAAGAACCTGCCCCCAGAAATATGTTACTGCACTTCCAGTGCCTAGAAATCTGCCAGACAGGGTACAATGTCTTTCACTTTGA

Protein Analysis

1855

Amino Acids

201.38

Weight (kDa)

6.46

Isoelectric Point (pI)

56.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 4294
Acc36I ACCTGC 4 cut(s) 1285, 2737, 4294, 5501
AccB1I GGYRCC 1 cut(s) 4561
AccB7I CCANNNNNTGG 3 cut(s) 3783, 4286, 5383
AccBSI CCGCTC 1 cut(s) 4928
AccI GTMKAC 2 cut(s) 422, 2909
AccII CGCG 1 cut(s) 3657
AccIII TCCGGA 1 cut(s) 4391
AciI CCGC 9 cut(s) 77, 1875, 2222, 3548, 4325, 4553, 4928, 4967, 5428
AclWI GGATC 8 cut(s) 154, 865, 1105, 1322, 1762, 1857, 3103, 5388
AcoI YGGCCR 4 cut(s) 43, 788, 3490, 4159
AcuI CTGAAG 7 cut(s) 471, 1356, 2124, 2138, 3022, 3096, 5067
AcvI CACGTG 1 cut(s) 2719
AcyI GRCGYC 1 cut(s) 4562
AdeI CACNNNGTG 4 cut(s) 1313, 3001, 5156, 5438
AfaI GTAC 9 cut(s) 1461, 2590, 2905, 4218, 4234, 4386, 4735, 5270, 5550
AfeI AGCGCT 1 cut(s) 2278
AflIII ACRYGT 4 cut(s) 868, 2716, 3057, 3655
AhlI ACTAGT 2 cut(s) 1252, 3584
AjiI CACGTC 1 cut(s) 3060
AjuI GAANNNNNNNTTGG 6 cut(s) 483, 515, 1560, 1592, 4168, 4200
Alw21I GWGCWC 2 cut(s) 1483, 3580
AlwI GGATC 8 cut(s) 154, 865, 1105, 1322, 1762, 1857, 3103, 5388
AlwNI CAGNNNCTG 7 cut(s) 197, 389, 898, 2576, 3293, 4286, 5383
Ama87I CYCGRG 2 cut(s) 2754, 3927
Aor13HI TCCGGA 1 cut(s) 4391
Aor51HI AGCGCT 1 cut(s) 2278
ArsI GACNNNNNNTTYG 6 cut(s) 523, 555, 1997, 2029, 3973, 4005
Asp700I GAANNNNTTC 2 cut(s) 1978, 3944
AspLEI GCGC 4 cut(s) 903, 1394, 2279, 4564
AsuC2I CCSGG 4 cut(s) 2431, 3928, 3929, 4021
AsuII TTCGAA 1 cut(s) 1558
AvaI CYCGRG 2 cut(s) 2754, 3927
AvaII GGWCC 9 cut(s) 28, 446, 1076, 3004, 3786, 3989, 4277, 4322, 5022
BaeGI GKGCMC 1 cut(s) 5434
BaeI ACNNNNGTAYC 4 cut(s) 4053, 4086, 4368, 4401
BalI TGGCCA 3 cut(s) 45, 790, 3492
BanI GGYRCC 1 cut(s) 4561
BanII GRGCYC 2 cut(s) 3580, 4948
BarI GAAGNNNNNNTAC 2 cut(s) 4504, 4536
BauI CACGAG 2 cut(s) 435, 4692
BbrPI CACGTG 1 cut(s) 2719
BbsI GAAGAC 4 cut(s) 555, 2171, 3192, 5295
Bbv12I GWGCWC 2 cut(s) 1483, 3580
BbvCI CCTCAGC 1 cut(s) 5448
BceAI ACGGC 1 cut(s) 4146
BcgI CGANNNNNNTGC 6 cut(s) 2735, 2769, 5155, 5189, 5456, 5490
BciVI GTATCC 3 cut(s) 373, 1521, 4426
BclI TGATCA 5 cut(s) 451, 931, 3049, 4252, 4372
BcnI CCSGG 4 cut(s) 2431, 3928, 3929, 4021
BcuI ACTAGT 2 cut(s) 1252, 3584
BfmI CTRYAG 5 cut(s) 824, 3099, 3642, 5097, 5164
BfoI RGCGCY 3 cut(s) 1395, 2280, 4565
BfuAI ACCTGC 4 cut(s) 1285, 2737, 4294, 5501
BfuI GTATCC 3 cut(s) 373, 1521, 4426
BglII AGATCT 2 cut(s) 2096, 2924
BlpI GCTNAGC 1 cut(s) 4409
BmcAI AGTACT 1 cut(s) 4735
Bme18I GGWCC 9 cut(s) 28, 446, 1076, 3004, 3786, 3989, 4277, 4322, 5022
BmeT110I CYCGRG 2 cut(s) 2754, 3927
BmgBI CACGTC 1 cut(s) 3060
BmrI ACTGGG 3 cut(s) 1701, 2553, 4376
BmuI ACTGGG 3 cut(s) 1701, 2553, 4376
BoxI GACNNNNGTC 1 cut(s) 1884
BpiI GAAGAC 4 cut(s) 555, 2171, 3192, 5295
BplI GAGNNNNNCTC 4 cut(s) 4738, 4770, 5441, 5473
BpmI CTGGAG 2 cut(s) 1557, 5405
Bpu10I CCTNAGC 2 cut(s) 3361, 5448
Bpu1102I GCTNAGC 1 cut(s) 4409
Bpu14I TTCGAA 1 cut(s) 1558
BpuEI CTTGAG 9 cut(s) 145, 949, 1579, 3005, 3120, 3312, 4527, 4932, 5383
BpuMI CCSGG 4 cut(s) 2431, 3928, 3929, 4021
BsaAI YACGTR 4 cut(s) 587, 2588, 2719, 3273
BsaBI GATNNNNATC 1 cut(s) 1365
BsaHI GRCGYC 1 cut(s) 4562
BsaI GGTCTC 2 cut(s) 2755, 4831
BsaWI WCCGGW 2 cut(s) 4036, 4391
BsaXI ACNNNNNCTCC 4 cut(s) 12, 42, 2896, 2926
Bse118I RCCGGY 1 cut(s) 1009
Bse3DI GCAATG 6 cut(s) 624, 708, 1020, 1187, 2629, 4662
Bse8I GATNNNNATC 1 cut(s) 1365
BseAI TCCGGA 1 cut(s) 4391
BseJI GATNNNNATC 1 cut(s) 1365
BseMI GCAATG 6 cut(s) 624, 708, 1020, 1187, 2629, 4662
BseRI GAGGAG 8 cut(s) 1402, 1669, 1791, 2382, 3150, 3585, 5067, 5446
BseSI GKGCMC 1 cut(s) 5434
BseX3I CGGCCG 1 cut(s) 4159
BseYI CCCAGC 2 cut(s) 2742, 3858
BsgI GTGCAG 5 cut(s) 1452, 2943, 3777, 4311, 5499
Bsh1236I CGCG 1 cut(s) 3657
Bsh1285I CGRYCG 1 cut(s) 4162
BshNI GGYRCC 1 cut(s) 4561
BsiEI CGRYCG 1 cut(s) 4162
BsiHKAI GWGCWC 2 cut(s) 1483, 3580
BsiHKCI CYCGRG 2 cut(s) 2754, 3927
BsiSI CCGG 8 cut(s) 269, 1010, 2430, 3928, 4020, 4037, 4392, 4480
BslFI GGGAC 6 cut(s) 862, 902, 1594, 3661, 3730, 4296
BsmBI CGTCTC 2 cut(s) 1773, 2572
BsmFI GGGAC 6 cut(s) 862, 902, 1594, 3661, 3730, 4296
BsmI GAATGC 2 cut(s) 1648, 5485
Bso31I GGTCTC 2 cut(s) 2755, 4831
BsoBI CYCGRG 2 cut(s) 2754, 3927
Bsp119I TTCGAA 1 cut(s) 1558
Bsp1286I GDGCHC 4 cut(s) 1483, 3580, 4948, 5434
Bsp13I TCCGGA 1 cut(s) 4391
Bsp1407I TGTACA 1 cut(s) 1459
Bsp1720I GCTNAGC 1 cut(s) 4409
Bsp19I CCATGG 3 cut(s) 1224, 3895, 5422
BspACI CCGC 9 cut(s) 77, 1875, 2222, 3548, 4325, 4553, 4928, 4967, 5428
BspEI TCCGGA 1 cut(s) 4391
BspFNI CGCG 1 cut(s) 3657
BspHI TCATGA 3 cut(s) 1888, 2770, 3316
BspMAI CTGCAG 4 cut(s) 828, 3646, 5101, 5168
BspMI ACCTGC 4 cut(s) 1285, 2737, 4294, 5501
BspPI GGATC 8 cut(s) 154, 865, 1105, 1322, 1762, 1857, 3103, 5388
BspQI GCTCTTC 2 cut(s) 2278, 5116
BspT104I TTCGAA 1 cut(s) 1558
BspT107I GGYRCC 1 cut(s) 4561
BspTNI GGTCTC 2 cut(s) 2755, 4831
BsrBI CCGCTC 1 cut(s) 4928
BsrDI GCAATG 6 cut(s) 624, 708, 1020, 1187, 2629, 4662
BsrFI RCCGGY 1 cut(s) 1009
BsrGI TGTACA 1 cut(s) 1459
BssAI RCCGGY 1 cut(s) 1009
BssNI GRCGYC 1 cut(s) 4562
BssSI CACGAG 2 cut(s) 435, 4692
BssT1I CCWWGG 9 cut(s) 569, 1224, 1237, 3011, 3831, 3895, 4877, 4896, 5422
Bst2BI CACGAG 2 cut(s) 435, 4692
Bst4CI ACNGT 8 cut(s) 1765, 1883, 1964, 2321, 3555, 4539, 4831, 5219
Bst6I CTCTTC 5 cut(s) 1530, 2114, 2278, 4259, 5116
BstACI GRCGYC 1 cut(s) 4562
BstAPI GCANNNNNTGC 3 cut(s) 3191, 4609, 5065
BstAUI TGTACA 1 cut(s) 1459
BstBAI YACGTR 4 cut(s) 587, 2588, 2719, 3273
BstBI TTCGAA 1 cut(s) 1558
BstDSI CCRYGG 3 cut(s) 1224, 3895, 5422
BstEII GGTNACC 1 cut(s) 728
BstENI CCTNNNNNAGG 2 cut(s) 1384, 1830
BstFNI CGCG 1 cut(s) 3657
BstH2I RGCGCY 3 cut(s) 1395, 2280, 4565
BstHHI GCGC 4 cut(s) 903, 1394, 2279, 4564
BstMCI CGRYCG 1 cut(s) 4162
BstNSI RCATGY 7 cut(s) 230, 601, 872, 1090, 2131, 2884, 4691
BstPAI GACNNNNGTC 1 cut(s) 1884
BstPI GGTNACC 1 cut(s) 728
BstSFI CTRYAG 5 cut(s) 824, 3099, 3642, 5097, 5164
BstSLI GKGCMC 1 cut(s) 5434
BstUI CGCG 1 cut(s) 3657
BstV2I GAAGAC 4 cut(s) 555, 2171, 3192, 5295
BstX2I RGATCY 9 cut(s) 146, 857, 1097, 1327, 1754, 2096, 2924, 3095, 5380
BstXI CCANNNNNNTGG 1 cut(s) 3407
BstYI RGATCY 9 cut(s) 146, 857, 1097, 1327, 1754, 2096, 2924, 3095, 5380
BstZI CGGCCG 1 cut(s) 4159
BsuI GTATCC 3 cut(s) 373, 1521, 4426
BtgI CCRYGG 3 cut(s) 1224, 3895, 5422
BtrI CACGTC 1 cut(s) 3060
BtsI GCAGTG 4 cut(s) 896, 1174, 4089, 5173
BveI ACCTGC 4 cut(s) 1285, 2737, 4294, 5501
CaiI CAGNNNCTG 7 cut(s) 197, 389, 898, 2576, 3293, 4286, 5383
CciI TCATGA 3 cut(s) 1888, 2770, 3316
CfoI GCGC 4 cut(s) 903, 1394, 2279, 4564
Cfr10I RCCGGY 1 cut(s) 1009
Cfr9I CCCGGG 1 cut(s) 3927
CseI GACGC 1 cut(s) 59
CsiI ACCWGGT 1 cut(s) 976
Csp6I GTAC 9 cut(s) 1460, 2589, 2904, 4217, 4233, 4385, 4734, 5269, 5549
CspCI CAANNNNNGTGG 2 cut(s) 5265, 5300
CviQI GTAC 9 cut(s) 1460, 2589, 2904, 4217, 4233, 4385, 4734, 5269, 5549
DinI GGCGCC 1 cut(s) 4563
DraI TTTAAA 4 cut(s) 168, 3853, 4170, 4594
DraIII CACNNNGTG 4 cut(s) 1313, 3001, 5156, 5438
EaeI YGGCCR 4 cut(s) 43, 788, 3490, 4159
EagI CGGCCG 1 cut(s) 4159
Eam1104I CTCTTC 5 cut(s) 1530, 2114, 2278, 4259, 5116
EarI CTCTTC 5 cut(s) 1530, 2114, 2278, 4259, 5116
EciI GGCGGA 1 cut(s) 4982
Ecl136II GAGCTC 1 cut(s) 3578
EclXI CGGCCG 1 cut(s) 4159
Eco130I CCWWGG 9 cut(s) 569, 1224, 1237, 3011, 3831, 3895, 4877, 4896, 5422
Eco147I AGGCCT 1 cut(s) 5453
Eco24I GRGCYC 2 cut(s) 3580, 4948
Eco31I GGTCTC 2 cut(s) 2755, 4831
Eco32I GATATC 1 cut(s) 1026
Eco47I GGWCC 9 cut(s) 28, 446, 1076, 3004, 3786, 3989, 4277, 4322, 5022
Eco47III AGCGCT 1 cut(s) 2278
Eco52I CGGCCG 1 cut(s) 4159
Eco53kI GAGCTC 1 cut(s) 3578
Eco57I CTGAAG 7 cut(s) 471, 1356, 2124, 2138, 3022, 3096, 5067
Eco72I CACGTG 1 cut(s) 2719
Eco88I CYCGRG 2 cut(s) 2754, 3927
Eco91I GGTNACC 1 cut(s) 728
EcoICRI GAGCTC 1 cut(s) 3578
EcoNI CCTNNNNNAGG 2 cut(s) 1384, 1830
EcoO109I RGGNCCY 1 cut(s) 3382
EcoO65I GGTNACC 1 cut(s) 728
EcoRI GAATTC 5 cut(s) 466, 1232, 1666, 2497, 4486
EcoRV GATATC 1 cut(s) 1026
EcoT14I CCWWGG 9 cut(s) 569, 1224, 1237, 3011, 3831, 3895, 4877, 4896, 5422
EcoT22I ATGCAT 8 cut(s) 327, 2133, 2469, 2527, 4453, 4474, 4519, 4620
EcoT38I GRGCYC 2 cut(s) 3580, 4948
EgeI GGCGCC 1 cut(s) 4563
EheI GGCGCC 1 cut(s) 4563
ErhI CCWWGG 9 cut(s) 569, 1224, 1237, 3011, 3831, 3895, 4877, 4896, 5422
Esp3I CGTCTC 2 cut(s) 1773, 2572
FalI AAGNNNNNCTT 2 cut(s) 1963, 1995
FaqI GGGAC 6 cut(s) 862, 902, 1594, 3661, 3730, 4296
FauI CCCGC 3 cut(s) 1882, 2229, 5421
FauNDI CATATG 1 cut(s) 2979
FbaI TGATCA 5 cut(s) 451, 931, 3049, 4252, 4372
FblI GTMKAC 2 cut(s) 422, 2909
FriOI GRGCYC 2 cut(s) 3580, 4948
GlaI GCGC 4 cut(s) 902, 1393, 2278, 4563
GsaI CCCAGC 2 cut(s) 2746, 3862
GsuI CTGGAG 2 cut(s) 1557, 5405
HaeII RGCGCY 3 cut(s) 1395, 2280, 4565
HapII CCGG 8 cut(s) 269, 1010, 2430, 3928, 4020, 4037, 4392, 4480
HgaI GACGC 1 cut(s) 59
HhaI GCGC 4 cut(s) 903, 1394, 2279, 4564
Hin1I GRCGYC 1 cut(s) 4562
Hin6I GCGC 4 cut(s) 901, 1392, 2277, 4562
HinP1I GCGC 4 cut(s) 901, 1392, 2277, 4562
HincII GTYRAC 6 cut(s) 157, 524, 2046, 2845, 2975, 3458
HindII GTYRAC 6 cut(s) 157, 524, 2046, 2845, 2975, 3458
HindIII AAGCTT 3 cut(s) 699, 4152, 5240
HpaI GTTAAC 2 cut(s) 157, 2845
HpaII CCGG 8 cut(s) 269, 1010, 2430, 3928, 4020, 4037, 4392, 4480
HpyCH4III ACNGT 8 cut(s) 1765, 1883, 1964, 2321, 3555, 4539, 4831, 5219
HpyCH4IV ACGT 8 cut(s) 586, 1782, 2587, 2718, 2906, 3059, 3272, 3734
HpySE526I ACGT 8 cut(s) 586, 1782, 2587, 2718, 2906, 3059, 3272, 3734
Hsp92I GRCGYC 1 cut(s) 4562
HspAI GCGC 4 cut(s) 901, 1392, 2277, 4562
KasI GGCGCC 1 cut(s) 4561
Kpn2I TCCGGA 1 cut(s) 4391
Ksp22I TGATCA 5 cut(s) 451, 931, 3049, 4252, 4372
KspAI GTTAAC 2 cut(s) 157, 2845
LguI GCTCTTC 2 cut(s) 2278, 5116
LmnI GCTCC 6 cut(s) 1389, 2182, 2263, 3016, 3163, 4651
MabI ACCWGGT 1 cut(s) 976
MaeII ACGT 8 cut(s) 586, 1782, 2587, 2718, 2906, 3059, 3272, 3734
MbiI CCGCTC 1 cut(s) 4928
MfeI CAATTG 2 cut(s) 2437, 5063
MflI RGATCY 9 cut(s) 146, 857, 1097, 1327, 1754, 2096, 2924, 3095, 5380
MhlI GDGCHC 4 cut(s) 1483, 3580, 4948, 5434
MlsI TGGCCA 3 cut(s) 45, 790, 3492
MluI ACGCGT 1 cut(s) 3655
MluNI TGGCCA 3 cut(s) 45, 790, 3492
Mly113I GGCGCC 1 cut(s) 4562
MlyI GAGTC 7 cut(s) 223, 395, 1576, 1831, 2432, 4291, 4318
MmeI TCCRAC 5 cut(s) 124, 801, 1237, 1355, 1827
Mox20I TGGCCA 3 cut(s) 45, 790, 3492
Mph1103I ATGCAT 8 cut(s) 327, 2133, 2469, 2527, 4453, 4474, 4519, 4620
MroI TCCGGA 1 cut(s) 4391
MroXI GAANNNNTTC 2 cut(s) 1978, 3944
MscI TGGCCA 3 cut(s) 45, 790, 3492
MslI CAYNNNNRTG 7 cut(s) 629, 1989, 3024, 3405, 3753, 4692, 4806
Msp20I TGGCCA 3 cut(s) 45, 790, 3492
MspA1I CMGCKG 3 cut(s) 682, 3154, 4370
MspI CCGG 8 cut(s) 269, 1010, 2430, 3928, 4020, 4037, 4392, 4480
MunI CAATTG 2 cut(s) 2437, 5063
Mva1269I GAATGC 2 cut(s) 1648, 5485
MvnI CGCG 1 cut(s) 3657
NarI GGCGCC 1 cut(s) 4562
NciI CCSGG 4 cut(s) 2431, 3928, 3929, 4021
NcoI CCATGG 3 cut(s) 1224, 3895, 5422
NdeI CATATG 1 cut(s) 2979
NmeAIII GCCGAG 1 cut(s) 3745
NmuCI GTSAC 7 cut(s) 57, 593, 757, 2321, 2719, 2807, 3104
NsiI ATGCAT 8 cut(s) 327, 2133, 2469, 2527, 4453, 4474, 4519, 4620
NspI RCATGY 7 cut(s) 230, 601, 872, 1090, 2131, 2884, 4691
NspV TTCGAA 1 cut(s) 1558
PaeI GCATGC 4 cut(s) 1090, 2131, 2884, 4691
PaeR7I CTCGAG 1 cut(s) 2754
PagI TCATGA 3 cut(s) 1888, 2770, 3316
PaqCI CACCTGC 1 cut(s) 4294
PasI CCCWGGG 1 cut(s) 4315
PceI AGGCCT 1 cut(s) 5453
PciI ACATGT 1 cut(s) 868
PciSI GCTCTTC 2 cut(s) 2278, 5116
PctI GAATGC 2 cut(s) 1648, 5485
PdmI GAANNNNTTC 2 cut(s) 1978, 3944
PflFI GACNNNGTC 1 cut(s) 26
PflMI CCANNNNNTGG 3 cut(s) 3783, 4286, 5383
PfoI TCCNGGA 1 cut(s) 2429
PleI GAGTC 7 cut(s) 222, 394, 1576, 1830, 2431, 4291, 4317
PluTI GGCGCC 1 cut(s) 4565
PmaCI CACGTG 1 cut(s) 2719
PmlI CACGTG 1 cut(s) 2719
PpsI GAGTC 7 cut(s) 222, 394, 1576, 1830, 2431, 4291, 4317
Ppu21I YACGTR 4 cut(s) 587, 2588, 2719, 3273
PscI ACATGT 1 cut(s) 868
PshAI GACNNNNGTC 1 cut(s) 1884
Psp124BI GAGCTC 1 cut(s) 3580
PspCI CACGTG 1 cut(s) 2719
PspEI GGTNACC 1 cut(s) 728
PspFI CCCAGC 2 cut(s) 2742, 3858
PsrI GAACNNNNNNTAC 2 cut(s) 2224, 2256
PstI CTGCAG 4 cut(s) 828, 3646, 5101, 5168
PstNI CAGNNNCTG 7 cut(s) 197, 389, 898, 2576, 3293, 4286, 5383
PsuI RGATCY 9 cut(s) 146, 857, 1097, 1327, 1754, 2096, 2924, 3095, 5380
PsyI GACNNNGTC 1 cut(s) 26
PvuII CAGCTG 3 cut(s) 682, 3154, 4370
RsaI GTAC 9 cut(s) 1461, 2590, 2905, 4218, 4234, 4386, 4735, 5270, 5550
RsaNI GTAC 9 cut(s) 1460, 2589, 2904, 4217, 4233, 4385, 4734, 5269, 5549
RseI CAYNNNNRTG 7 cut(s) 629, 1989, 3024, 3405, 3753, 4692, 4806
SacI GAGCTC 1 cut(s) 3580
SapI GCTCTTC 2 cut(s) 2278, 5116
ScaI AGTACT 1 cut(s) 4735
SchI GAGTC 7 cut(s) 223, 395, 1576, 1831, 2432, 4291, 4318
SduI GDGCHC 4 cut(s) 1483, 3580, 4948, 5434
SexAI ACCWGGT 1 cut(s) 976
SfcI CTRYAG 5 cut(s) 824, 3099, 3642, 5097, 5164
SfoI GGCGCC 1 cut(s) 4563
Sfr274I CTCGAG 1 cut(s) 2754
SfuI TTCGAA 1 cut(s) 1558
SinI GGWCC 9 cut(s) 28, 446, 1076, 3004, 3786, 3989, 4277, 4322, 5022
SlaI CTCGAG 1 cut(s) 2754
SmaI CCCGGG 1 cut(s) 3929
SmiMI CAYNNNNRTG 7 cut(s) 629, 1989, 3024, 3405, 3753, 4692, 4806
SpeI ACTAGT 2 cut(s) 1252, 3584
SphI GCATGC 4 cut(s) 1090, 2131, 2884, 4691
SseBI AGGCCT 1 cut(s) 5453
SsiI CCGC 9 cut(s) 77, 1875, 2222, 3548, 4325, 4553, 4928, 4967, 5428
SspDI GGCGCC 1 cut(s) 4561
SspI AATATT 2 cut(s) 3664, 4608
SstI GAGCTC 1 cut(s) 3580
StuI AGGCCT 1 cut(s) 5453
StyI CCWWGG 9 cut(s) 569, 1224, 1237, 3011, 3831, 3895, 4877, 4896, 5422
TaaI ACNGT 8 cut(s) 1765, 1883, 1964, 2321, 3555, 4539, 4831, 5219
TaiI ACGT 8 cut(s) 589, 1785, 2590, 2721, 2909, 3062, 3275, 3737
TaqI TCGA 4 cut(s) 1195, 1558, 2755, 4438
TaqII GACCGA 1 cut(s) 1018
TatI WGTACW 4 cut(s) 1459, 4216, 4232, 4733
TauI GCSGC 1 cut(s) 4931
TseFI GTSAC 7 cut(s) 57, 593, 757, 2321, 2719, 2807, 3104
Tsp45I GTSAC 7 cut(s) 57, 593, 757, 2321, 2719, 2807, 3104
TspGWI ACGGA 2 cut(s) 207, 3187
TspMI CCCGGG 1 cut(s) 3927
Tth111I GACNNNGTC 1 cut(s) 26
Van91I CCANNNNNTGG 3 cut(s) 3783, 4286, 5383
VpaK11BI GGWCC 9 cut(s) 28, 446, 1076, 3004, 3786, 3989, 4277, 4322, 5022
XagI CCTNNNNNAGG 2 cut(s) 1384, 1830
XbaI TCTAGA 5 cut(s) 410, 1109, 1670, 5141, 5183
XceI RCATGY 7 cut(s) 230, 601, 872, 1090, 2131, 2884, 4691
XcmI CCANNNNNNNNNTGG 4 cut(s) 38, 140, 1402, 2540
XhoI CTCGAG 1 cut(s) 2754
XmaI CCCGGG 1 cut(s) 3927
XmiI GTMKAC 2 cut(s) 422, 2909
XmnI GAANNNNTTC 2 cut(s) 1978, 3944
ZrmI AGTACT 1 cut(s) 4735
Zsp2I ATGCAT 8 cut(s) 327, 2133, 2469, 2527, 4453, 4474, 4519, 4620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.