Rh3BG322600

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
33298291 .. 33304621
6331 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG322600.1

Sequence Viewer

Length: 1386 bp
ATGGGGTTGGACAGCATACTAGGTTATCTGCAGAATAAGACCATTTTGATCACTGGTGCGACCGGCTTCCTTGGAATGGTGTTTGTGGAGAAAATTCTAAGGGTGCAACCAAATGTGAAGAAGCTCTATCTTCTTGTAAGAGCCTCTGATACCAAGTCAGCAACACATCGCATGCAAGATGAGATTATAGGGAAGGAATTGTTCAGGGTTCTGAGGGAGAAATGGGGGGCAGATTTTGATTCTTTCATTTCCGAAAAAGTTGTTGCTCTCCCAGGAGATATCACTTTCGAGAACCTCGGAGTGAAAGGGATAATATTCAACTCTGCAGCCACCACCAACTTTGACGAAAGATATGATATTTCACTGGCGATACTTCTCCATGTATCAACTGCTTATGTGTGTGGGGAAAGGGCGGGGCTCATACCAGAAGACTCATCTTCAATGGATAAGATGGTAAAGGAGATGGGTAATTTTGATTTTGAAGCATTGGAAAAGGGCCTTGTGCAGGAGAAATTGAATGAACTAAAAGCACTAGATGCTTCAGAAGAAGTTGTTACAAACACAATGAAGGATTTTGGCATTAAAACGGCTAGACTATATGGATGGCCAAACACGTATGTGTTCACAAAAGCAATGGGTGAAATATTTCTACAACGCTCGAAAGACAATTTGCCTCTTGTGGTCGTACGTCCAACAATAGTTACTAGCACTAACAAGGAACCATTTTCCGGTTGGATCCAAGGTTTCAGAACTATTGATAGTGTAATTGCTGGTTATTGCAAAGGCAAGCTGACATGCTTGCTTGTCGATCCTGCAACAGTACTCGATATGATTCCTGTTGACATGTTGGTAAATTCAATAATCATAGCAATGGTGGCAAATGCAAATCAGTCTTCTGGAAATATTATTTATCATGTCGGATCCTCATTGAGAAACCCTTTGAAATTCTTTCAAATGCACAACTTTATCTTTCAATACTTCACCAAGAATCCTTGGCTTGATAAGGACGGTAAGCCTGTCATTGTTACCAAGGGTACAATATTGACGACTATGGCTACTTTTCGCATGTACATGAATATTCGCTACATGCTACCTTTGAAGGGATTGAAGTTCATGAACAAAGCATTCTTCCAGTATTTCCAAGAGATATATGTCAACTATAGTCGGAAACTCAACTTGGTTATGCGCCTGGTAGAGCTATACGAACCCTATATGCTGTTCAAAGGAATCTTTGATGACACCAATACAGAGAAGTTGTGGAGGACAACAGGGGAGAGTTTCATAGAGGTTGAAAGTTTTAATTTTGATGCGACATGCATAGATTGGGAAGAGTACATCATGCACACTCACATTCCTGGCCTCCTAAAGCATGTTTTGATCAAATGA

Protein Analysis

461

Amino Acids

52.56

Weight (kDa)

7.05

Isoelectric Point (pI)

32.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_4 PF07993 17 - 122 3.2e-22 Male sterility protein
NAD_binding_4 PF07993 123 - 287 4.1e-28 Male sterility protein
Sterile PF03015 362 - 459 3.3e-15 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 413
AclWI GGATC 5 cut(s) 730, 743, 803, 915, 928
AcoI YGGCCR 1 cut(s) 605
AcsI RAATTY 3 cut(s) 93, 853, 944
AcuI CTGAAG 1 cut(s) 525
AfaI GTAC 5 cut(s) 687, 822, 1036, 1070, 1334
AfiI CCNNNNNNNGG 4 cut(s) 76, 505, 728, 1100
AflIII ACRYGT 2 cut(s) 612, 843
AjnI CCWGG 3 cut(s) 271, 1188, 1354
AjuI GAANNNNNNNTTGG 2 cut(s) 1160, 1192
AleI CACNNNNGTG 1 cut(s) 617
AluBI AGCT 3 cut(s) 124, 790, 1198
AluI AGCT 3 cut(s) 124, 790, 1198
AlwI GGATC 5 cut(s) 730, 743, 803, 915, 928
AoxI GGCC 3 cut(s) 496, 605, 1357
ApeKI GCWGC 1 cut(s) 326
ApoI RAATTY 3 cut(s) 93, 853, 944
Asp700I GAANNNNTTC 1 cut(s) 645
AspLEI GCGC 1 cut(s) 1188
AspS9I GGNCC 1 cut(s) 496
AsuHPI GGTGA 2 cut(s) 650, 973
BalI TGGCCA 1 cut(s) 607
BamHI GGATCC 2 cut(s) 735, 920
BanII GRGCYC 1 cut(s) 420
BbsI GAAGAC 2 cut(s) 435, 885
BbvI GCAGC 1 cut(s) 338
BccI CCATC 3 cut(s) 445, 457, 597
BceAI ACGGC 1 cut(s) 603
BciT130I CCWGG 3 cut(s) 273, 1190, 1356
BclI TGATCA 2 cut(s) 48, 1377
BfaI CTAG 4 cut(s) 20, 533, 591, 705
BfmI CTRYAG 3 cut(s) 29, 324, 1159
BisI GCNGC 1 cut(s) 327
BlsI GCNGC 1 cut(s) 328
BmcAI AGTACT 1 cut(s) 822
Bme1390I CCNGG 3 cut(s) 273, 1190, 1356
BmgT120I GGNCC 1 cut(s) 496
BmiI GGNNCC 3 cut(s) 720, 737, 922
BmrFI CCNGG 3 cut(s) 273, 1190, 1356
BmsI GCATC 2 cut(s) 526, 1297
BpiI GAAGAC 2 cut(s) 435, 885
BsaAI YACGTR 1 cut(s) 615
BsaJI CCNNGG 6 cut(s) 70, 271, 295, 739, 992, 1029
BsaWI WCCGGW 1 cut(s) 728
Bsc4I CCNNNNNNNGG 4 cut(s) 76, 505, 728, 1100
Bse118I RCCGGY 1 cut(s) 62
Bse1I ACTGG 3 cut(s) 58, 369, 1132
Bse3DI GCAATG 2 cut(s) 639, 876
BseBI CCWGG 3 cut(s) 273, 1190, 1356
BseDI CCNNGG 6 cut(s) 70, 271, 295, 739, 992, 1029
BseGI GGATG 1 cut(s) 608
BseLI CCNNNNNNNGG 4 cut(s) 76, 505, 728, 1100
BseMI GCAATG 2 cut(s) 639, 876
BseMII CTCAG 1 cut(s) 203
BseNI ACTGG 3 cut(s) 58, 369, 1132
BseXI GCAGC 1 cut(s) 338
BsgI GTGCAG 1 cut(s) 524
Bsh1285I CGRYCG 1 cut(s) 63
BshFI GGCC 3 cut(s) 498, 607, 1359
BsiEI CGRYCG 1 cut(s) 63
BsiSI CCGG 2 cut(s) 63, 729
BsiWI CGTACG 1 cut(s) 685
BslI CCNNNNNNNGG 4 cut(s) 76, 505, 728, 1100
BsmI GAATGC 1 cut(s) 1124
BsnI GGCC 3 cut(s) 498, 607, 1359
Bsp1286I GDGCHC 1 cut(s) 420
Bsp1407I TGTACA 1 cut(s) 1068
Bsp143I GATC 5 cut(s) 48, 735, 808, 920, 1377
BspACI CCGC 1 cut(s) 413
BspANI GGCC 3 cut(s) 498, 607, 1359
BspCNI CTCAG 1 cut(s) 204
BspHI TCATGA 1 cut(s) 1113
BspLI GGNNCC 3 cut(s) 720, 737, 922
BspMAI CTGCAG 2 cut(s) 33, 328
BspPI GGATC 5 cut(s) 730, 743, 803, 915, 928
BsrDI GCAATG 2 cut(s) 639, 876
BsrFI RCCGGY 1 cut(s) 62
BsrGI TGTACA 1 cut(s) 1068
BsrI ACTGG 3 cut(s) 58, 369, 1132
BssAI RCCGGY 1 cut(s) 62
BssECI CCNNGG 6 cut(s) 70, 271, 295, 739, 992, 1029
BssMI GATC 5 cut(s) 48, 735, 808, 920, 1377
BssT1I CCWWGG 4 cut(s) 70, 739, 992, 1029
Bst2UI CCWGG 3 cut(s) 273, 1190, 1356
Bst4CI ACNGT 2 cut(s) 820, 1010
Bst6I CTCTTC 1 cut(s) 1323
BstAPI GCANNNNNTGC 1 cut(s) 536
BstAUI TGTACA 1 cut(s) 1068
BstBAI YACGTR 1 cut(s) 615
BstC8I GCNNGC 3 cut(s) 173, 788, 800
BstDEI CTNAG 2 cut(s) 98, 212
BstENI CCTNNNNNAGG 1 cut(s) 503
BstF5I GGATG 1 cut(s) 608
BstHHI GCGC 1 cut(s) 1188
BstKTI GATC 5 cut(s) 51, 738, 811, 923, 1380
BstMBI GATC 5 cut(s) 48, 735, 808, 920, 1377
BstMCI CGRYCG 1 cut(s) 63
BstMWI GCNNNNNNNGC 2 cut(s) 536, 875
BstNI CCWGG 3 cut(s) 273, 1190, 1356
BstNSI RCATGY 7 cut(s) 175, 798, 847, 1069, 1090, 1317, 1373
BstSCI CCNGG 3 cut(s) 271, 1188, 1354
BstSFI CTRYAG 3 cut(s) 29, 324, 1159
BstV1I GCAGC 1 cut(s) 338
BstV2I GAAGAC 2 cut(s) 435, 885
BstX2I RGATCY 2 cut(s) 735, 920
BstYI RGATCY 2 cut(s) 735, 920
BsuRI GGCC 3 cut(s) 498, 607, 1359
BtgZI GCGATG 1 cut(s) 152
BtsCI GGATG 1 cut(s) 608
BtsIMutI CAGTG 2 cut(s) 51, 362
Cac8I GCNNGC 3 cut(s) 173, 788, 800
CciI TCATGA 1 cut(s) 1113
CfoI GCGC 1 cut(s) 1188
Cfr10I RCCGGY 1 cut(s) 62
Cfr13I GGNCC 1 cut(s) 496
Csp6I GTAC 5 cut(s) 686, 821, 1035, 1069, 1333
CspCI CAANNNNNGTGG 2 cut(s) 322, 357
CviQI GTAC 5 cut(s) 686, 821, 1035, 1069, 1333
DdeI CTNAG 2 cut(s) 98, 212
DpnI GATC 5 cut(s) 50, 737, 810, 922, 1379
DpnII GATC 5 cut(s) 48, 735, 808, 920, 1377
EaeI YGGCCR 1 cut(s) 605
Eam1104I CTCTTC 1 cut(s) 1323
EarI CTCTTC 1 cut(s) 1323
Eco130I CCWWGG 4 cut(s) 70, 739, 992, 1029
Eco24I GRGCYC 1 cut(s) 420
Eco32I GATATC 1 cut(s) 280
Eco57I CTGAAG 1 cut(s) 525
EcoNI CCTNNNNNAGG 1 cut(s) 503
EcoO109I RGGNCCY 1 cut(s) 496
EcoRII CCWGG 3 cut(s) 271, 1188, 1354
EcoRV GATATC 1 cut(s) 280
EcoT14I CCWWGG 4 cut(s) 70, 739, 992, 1029
EcoT22I ATGCAT 1 cut(s) 1319
EcoT38I GRGCYC 1 cut(s) 420
ErhI CCWWGG 4 cut(s) 70, 739, 992, 1029
FauI CCCGC 1 cut(s) 406
FbaI TGATCA 2 cut(s) 48, 1377
Fnu4HI GCNGC 1 cut(s) 327
FokI GGATG 1 cut(s) 615
FriOI GRGCYC 1 cut(s) 420
Fsp4HI GCNGC 1 cut(s) 327
FspBI CTAG 4 cut(s) 20, 533, 591, 705
GlaI GCGC 1 cut(s) 1187
GluI GCNGC 1 cut(s) 327
HaeIII GGCC 3 cut(s) 498, 607, 1359
HapII CCGG 2 cut(s) 63, 729
HhaI GCGC 1 cut(s) 1188
Hin6I GCGC 1 cut(s) 1186
HinP1I GCGC 1 cut(s) 1186
HincII GTYRAC 2 cut(s) 841, 1156
HindII GTYRAC 2 cut(s) 841, 1156
HinfI GANTC 5 cut(s) 239, 431, 832, 988, 1227
HpaII CCGG 2 cut(s) 63, 729
HphI GGTGA 2 cut(s) 650, 973
Hpy166II GTNNAC 3 cut(s) 624, 841, 1156
Hpy188I TCNGA 8 cut(s) 148, 213, 253, 299, 544, 749, 920, 1167
Hpy188III TCNNGA 3 cut(s) 289, 897, 1114
Hpy8I GTNNAC 3 cut(s) 624, 841, 1156
HpyAV CCTTC 3 cut(s) 187, 562, 1093
HpyCH4III ACNGT 2 cut(s) 820, 1010
HpyCH4IV ACGT 2 cut(s) 614, 688
HpyF10VI GCNNNNNNNGC 2 cut(s) 536, 875
HpyF3I CTNAG 2 cut(s) 98, 212
HpySE526I ACGT 2 cut(s) 614, 688
HspAI GCGC 1 cut(s) 1186
Ksp22I TGATCA 2 cut(s) 48, 1377
Kzo9I GATC 5 cut(s) 48, 735, 808, 920, 1377
Lsp1109I GCAGC 1 cut(s) 338
LweI GCATC 2 cut(s) 526, 1297
MaeI CTAG 4 cut(s) 20, 533, 591, 705
MaeII ACGT 2 cut(s) 614, 688
MaeIII GTNAC 3 cut(s) 553, 700, 1024
MalI GATC 5 cut(s) 50, 737, 810, 922, 1379
MboI GATC 5 cut(s) 48, 735, 808, 920, 1377
MboII GAAGA 8 cut(s) 122, 130, 429, 440, 557, 885, 1120, 1340
MflI RGATCY 2 cut(s) 735, 920
MhlI GDGCHC 1 cut(s) 420
MlsI TGGCCA 1 cut(s) 607
MluCI AATT 9 cut(s) 93, 197, 469, 512, 667, 765, 853, 944, 1300
MluNI TGGCCA 1 cut(s) 607
MlyI GAGTC 1 cut(s) 425
MmeI TCCRAC 4 cut(s) 713, 716, 898, 1145
MnlI CCTC 8 cut(s) 154, 207, 305, 684, 934, 1254, 1279, 1370
Mox20I TGGCCA 1 cut(s) 607
Mph1103I ATGCAT 1 cut(s) 1319
MroXI GAANNNNTTC 1 cut(s) 645
MscI TGGCCA 1 cut(s) 607
MseI TTAA 2 cut(s) 582, 1299
MslI CAYNNNNRTG 3 cut(s) 617, 869, 1070
Msp20I TGGCCA 1 cut(s) 607
MspI CCGG 2 cut(s) 63, 729
MspR9I CCNGG 3 cut(s) 273, 1190, 1356
Mva1269I GAATGC 1 cut(s) 1124
MvaI CCWGG 3 cut(s) 273, 1190, 1356
MwoI GCNNNNNNNGC 2 cut(s) 536, 875
NdeII GATC 5 cut(s) 48, 735, 808, 920, 1377
NlaIV GGNNCC 3 cut(s) 720, 737, 922
NsiI ATGCAT 1 cut(s) 1319
NspI RCATGY 7 cut(s) 175, 798, 847, 1069, 1090, 1317, 1373
OliI CACNNNNGTG 1 cut(s) 617
PaeI GCATGC 1 cut(s) 175
PagI TCATGA 1 cut(s) 1113
PciI ACATGT 1 cut(s) 843
PctI GAATGC 1 cut(s) 1124
PdmI GAANNNNTTC 1 cut(s) 645
PfeI GAWTC 4 cut(s) 239, 832, 988, 1227
Pfl23II CGTACG 1 cut(s) 685
PkrI GCNGC 1 cut(s) 328
PleI GAGTC 1 cut(s) 425
PpsI GAGTC 1 cut(s) 425
Ppu21I YACGTR 1 cut(s) 615
PscI ACATGT 1 cut(s) 843
Psp6I CCWGG 3 cut(s) 271, 1188, 1354
PspGI CCWGG 3 cut(s) 271, 1188, 1354
PspLI CGTACG 1 cut(s) 685
PspN4I GGNNCC 3 cut(s) 720, 737, 922
PspPI GGNCC 1 cut(s) 496
PstI CTGCAG 2 cut(s) 33, 328
PsuI RGATCY 2 cut(s) 735, 920
RsaI GTAC 5 cut(s) 687, 822, 1036, 1070, 1334
RsaNI GTAC 5 cut(s) 686, 821, 1035, 1069, 1333
RseI CAYNNNNRTG 3 cut(s) 617, 869, 1070
SaqAI TTAA 2 cut(s) 582, 1299
SatI GCNGC 1 cut(s) 327
Sau3AI GATC 5 cut(s) 48, 735, 808, 920, 1377
Sau96I GGNCC 1 cut(s) 496
ScaI AGTACT 1 cut(s) 822
SchI GAGTC 1 cut(s) 425
ScrFI CCNGG 3 cut(s) 273, 1190, 1356
SduI GDGCHC 1 cut(s) 420
SfaNI GCATC 2 cut(s) 526, 1297
SfcI CTRYAG 3 cut(s) 29, 324, 1159
SmiMI CAYNNNNRTG 3 cut(s) 617, 869, 1070
SphI GCATGC 1 cut(s) 175
Sse9I AATT 9 cut(s) 93, 197, 469, 512, 667, 765, 853, 944, 1300
SsiI CCGC 1 cut(s) 413
SspI AATATT 5 cut(s) 315, 645, 904, 1041, 1078
SspMI CTAG 4 cut(s) 20, 533, 591, 705
StyD4I CCNGG 3 cut(s) 271, 1188, 1354
StyI CCWWGG 4 cut(s) 70, 739, 992, 1029
TaaI ACNGT 2 cut(s) 820, 1010
TaiI ACGT 2 cut(s) 617, 691
TaqI TCGA 4 cut(s) 288, 659, 807, 825
TasI AATT 9 cut(s) 93, 197, 469, 512, 667, 765, 853, 944, 1300
TatI WGTACW 3 cut(s) 820, 1068, 1332
TfiI GAWTC 4 cut(s) 239, 832, 988, 1227
Tru1I TTAA 2 cut(s) 582, 1299
Tru9I TTAA 2 cut(s) 582, 1299
TscAI CASTG 2 cut(s) 58, 369
TseI GCWGC 1 cut(s) 326
TspDTI ATGAA 7 cut(s) 235, 534, 581, 1088, 1102, 1130, 1270
TspRI CASTG 2 cut(s) 58, 369
XagI CCTNNNNNAGG 1 cut(s) 503
XapI RAATTY 3 cut(s) 93, 853, 944
XceI RCATGY 7 cut(s) 175, 798, 847, 1069, 1090, 1317, 1373
XcmI CCANNNNNNNNNTGG 1 cut(s) 729
XmnI GAANNNNTTC 1 cut(s) 645
XspI CTAG 4 cut(s) 20, 533, 591, 705
ZrmI AGTACT 1 cut(s) 822
Zsp2I ATGCAT 1 cut(s) 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.