Rh7CG344800

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
38903213 .. 38907869
4657 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG344800.1

Sequence Viewer

Length: 1077 bp
ATGCATAATGAGATCACAGGGAAAGAGTTGTTTAGGGTTCTGAGGGAGAAATGGGGTGCAGATTTTGATTCCTTCATATTAGAAAAAGTTGTTCCTCTGTCTGGAGATATAATTTTTGAAGACCTAGGAGTGAAGGTAATCAAACAAAAGGAAGAGATGTGCAATGAAGTACATATCATAATTAATTCTGCAGCAACCACCAAGTTTGATGAAAGGTATGATGTTGCGTTGGAAGTGAATACATTTGGAGTTTTGAATATGTTGGACTTTGCAAAAAAATGCTTGAAATTGGAGATGGTTGTCCACGTGTCAACAGCCTATGTGTGTGGTGAAAGGGTAGGGCTAATACTAGAGGACTCCTCTTCAATGGAAGAGATGGCGAAAAAAACCAGTAAATTTTACTTGAAATCACAGGAAAAAAAAATAGTGGAGAGCAAATTGAAAGAACTACAAGCACAGAATGCTTCGGAAGAAGTTATAACAAATGCAATGAAGGACTTAGGCACTGCAAGGTCTAAGTTGTACGGGTGGCCAAATACCTATGTTCTTACAAAGGTGATGGGAGAAATGTATCTAGGGCATGCAAAAGGTAATCTATCCATTGCTATTATACGTCCAACCATGATTACAAGTACATATAAGGAGCCATTTTCAGGCTGGATCGAAGGTTTCAGGACCTATGATAGTCTAATTGGTGGTTACTGGAAAGGGAAGCTCACAGGCATACCTGTCGATCCTATGTCAGTAGTGGATATGATTCCGGTTGACATGGTGGTAAATTCGATAATTACAGCAATGGTAGTTAATGCGAATAAATCTGGCAAAATCATTTACCACATGGGAACATCATTGCGAAATCCCTTAACATTTTCTGATTTTAACAACTTTATGTTCCAATATTGCACCAAAAATCCATGGCTTAACAATGATGGAAGCCCCGTCAAGGTTAAAAAGTTGAAAATGTTGAGGAGTATGGACGCTTTTCACTTGTACATGCAAATACCATTGCAGGTTTGTTTGTTTTTTACTTTTTTCCTTTCTACCACAACATACACTAATTCATTTATATTCTTGTAA

Protein Analysis

358

Amino Acids

40.71

Weight (kDa)

8.1

Isoelectric Point (pI)

35.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_4 PF07993 3 - 262 1.5e-52 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 479
Acc36I ACCTGC 1 cut(s) 1000
AclWI GGATC 2 cut(s) 668, 728
AcoI YGGCCR 1 cut(s) 530
AcsI RAATTY 2 cut(s) 395, 778
AcvI CACGTG 1 cut(s) 307
AfaI GTAC 4 cut(s) 171, 524, 634, 992
AfiI CCNNNNNNNGG 3 cut(s) 101, 653, 943
AflIII ACRYGT 1 cut(s) 306
AgsI TTSAA 7 cut(s) 119, 256, 286, 366, 406, 442, 958
AluBI AGCT 1 cut(s) 715
AluI AGCT 1 cut(s) 715
AlwI GGATC 2 cut(s) 668, 728
AoxI GGCC 1 cut(s) 530
ApeKI GCWGC 1 cut(s) 191
ApoI RAATTY 2 cut(s) 395, 778
AseI ATTAAT 1 cut(s) 183
AspA2I CCTAGG 1 cut(s) 124
AspS9I GGNCC 1 cut(s) 675
AsuHPI GGTGA 2 cut(s) 341, 568
AvaII GGWCC 1 cut(s) 675
AvrII CCTAGG 1 cut(s) 124
BalI TGGCCA 1 cut(s) 532
BbrPI CACGTG 1 cut(s) 307
BbsI GAAGAC 1 cut(s) 126
BbvI GCAGC 1 cut(s) 203
BccI CCATC 4 cut(s) 289, 370, 553, 923
BcgI CGANNNNNNTGC 2 cut(s) 712, 746
BfaI CTAG 3 cut(s) 125, 350, 575
BfmI CTRYAG 1 cut(s) 189
BfuAI ACCTGC 1 cut(s) 1000
BisI GCNGC 1 cut(s) 192
BlnI CCTAGG 1 cut(s) 124
BlsI GCNGC 1 cut(s) 193
Bme18I GGWCC 1 cut(s) 675
BmgT120I GGNCC 1 cut(s) 675
BmiI GGNNCC 1 cut(s) 645
BpiI GAAGAC 1 cut(s) 126
BplI GAGNNNNNCTC 2 cut(s) 344, 376
BpmI CTGGAG 1 cut(s) 123
BsaAI YACGTR 1 cut(s) 307
BsaJI CCNNGG 2 cut(s) 124, 914
BsaWI WCCGGW 1 cut(s) 760
BsaXI ACNNNNNCTCC 2 cut(s) 120, 150
Bsc4I CCNNNNNNNGG 3 cut(s) 101, 653, 943
Bse1I ACTGG 2 cut(s) 390, 707
Bse3DI GCAATG 6 cut(s) 169, 495, 600, 801, 848, 1004
BseDI CCNNGG 2 cut(s) 124, 914
BseLI CCNNNNNNNGG 3 cut(s) 101, 653, 943
BseMI GCAATG 6 cut(s) 169, 495, 600, 801, 848, 1004
BseMII CTCAG 1 cut(s) 32
BseNI ACTGG 2 cut(s) 390, 707
BseRI GAGGAG 2 cut(s) 349, 982
BseXI GCAGC 1 cut(s) 203
BsgI GTGCAG 1 cut(s) 78
BshFI GGCC 1 cut(s) 532
BsiSI CCGG 1 cut(s) 761
BslI CCNNNNNNNGG 3 cut(s) 101, 653, 943
BsmI GAATGC 1 cut(s) 466
BsnI GGCC 1 cut(s) 532
Bsp1407I TGTACA 1 cut(s) 990
Bsp143I GATC 3 cut(s) 12, 660, 733
Bsp19I CCATGG 1 cut(s) 914
BspANI GGCC 1 cut(s) 532
BspCNI CTCAG 1 cut(s) 33
BspLI GGNNCC 1 cut(s) 645
BspMAI CTGCAG 1 cut(s) 193
BspMI ACCTGC 1 cut(s) 1000
BspPI GGATC 2 cut(s) 668, 728
BsrDI GCAATG 6 cut(s) 169, 495, 600, 801, 848, 1004
BsrGI TGTACA 1 cut(s) 990
BsrI ACTGG 2 cut(s) 390, 707
BssECI CCNNGG 2 cut(s) 124, 914
BssMI GATC 3 cut(s) 12, 660, 733
BssT1I CCWWGG 2 cut(s) 124, 914
Bst6I CTCTTC 3 cut(s) 147, 366, 367
BstAPI GCANNNNNTGC 1 cut(s) 461
BstAUI TGTACA 1 cut(s) 990
BstBAI YACGTR 1 cut(s) 307
BstC8I GCNNGC 1 cut(s) 582
BstDEI CTNAG 3 cut(s) 41, 499, 516
BstDSI CCRYGG 1 cut(s) 914
BstKTI GATC 3 cut(s) 15, 663, 736
BstMBI GATC 3 cut(s) 12, 660, 733
BstMWI GCNNNNNNNGC 1 cut(s) 461
BstNSI RCATGY 2 cut(s) 584, 997
BstSFI CTRYAG 1 cut(s) 189
BstV1I GCAGC 1 cut(s) 203
BstV2I GAAGAC 1 cut(s) 126
BsuRI GGCC 1 cut(s) 532
BtgI CCRYGG 1 cut(s) 914
BtsI GCAGTG 1 cut(s) 504
BtsIMutI CAGTG 1 cut(s) 504
BveI ACCTGC 1 cut(s) 1000
Cac8I GCNNGC 1 cut(s) 582
Cfr13I GGNCC 1 cut(s) 675
CseI GACGC 1 cut(s) 986
Csp6I GTAC 4 cut(s) 170, 523, 633, 991
CspCI CAANNNNNGTGG 2 cut(s) 187, 222
CviAII CATG 6 cut(s) 581, 622, 769, 838, 915, 994
CviJI RGCY 8 cut(s) 317, 343, 532, 646, 657, 715, 919, 936
CviKI_1 RGCY 8 cut(s) 317, 343, 532, 646, 657, 715, 919, 936
CviQI GTAC 4 cut(s) 170, 523, 633, 991
DdeI CTNAG 3 cut(s) 41, 499, 516
DpnI GATC 3 cut(s) 14, 662, 735
DpnII GATC 3 cut(s) 12, 660, 733
EaeI YGGCCR 1 cut(s) 530
Eam1104I CTCTTC 3 cut(s) 147, 366, 367
EarI CTCTTC 3 cut(s) 147, 366, 367
Eco130I CCWWGG 2 cut(s) 124, 914
Eco47I GGWCC 1 cut(s) 675
Eco72I CACGTG 1 cut(s) 307
EcoO109I RGGNCCY 1 cut(s) 675
EcoT14I CCWWGG 2 cut(s) 124, 914
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 124, 914
FaeI CATG 6 cut(s) 584, 625, 772, 841, 918, 997
FatI CATG 6 cut(s) 580, 621, 768, 837, 914, 993
Fnu4HI GCNGC 1 cut(s) 192
Fsp4HI GCNGC 1 cut(s) 192
FspBI CTAG 3 cut(s) 125, 350, 575
GluI GCNGC 1 cut(s) 192
GsuI CTGGAG 1 cut(s) 123
HaeIII GGCC 1 cut(s) 532
HapII CCGG 1 cut(s) 761
HgaI GACGC 1 cut(s) 986
Hin1II CATG 6 cut(s) 584, 625, 772, 841, 918, 997
HincII GTYRAC 2 cut(s) 312, 766
HindII GTYRAC 2 cut(s) 312, 766
HinfI GANTC 3 cut(s) 68, 356, 757
HpaII CCGG 1 cut(s) 761
HphI GGTGA 2 cut(s) 341, 568
Hpy166II GTNNAC 3 cut(s) 304, 312, 766
Hpy188I TCNGA 3 cut(s) 42, 469, 874
Hpy188III TCNNGA 2 cut(s) 102, 673
Hpy8I GTNNAC 3 cut(s) 304, 312, 766
HpyAV CCTTC 4 cut(s) 82, 127, 487, 659
HpyCH4IV ACGT 2 cut(s) 306, 613
HpyF10VI GCNNNNNNNGC 1 cut(s) 461
HpyF3I CTNAG 3 cut(s) 41, 499, 516
HpySE526I ACGT 2 cut(s) 306, 613
Hsp92II CATG 6 cut(s) 584, 625, 772, 841, 918, 997
Kzo9I GATC 3 cut(s) 12, 660, 733
LmnI GCTCC 1 cut(s) 643
Lsp1109I GCAGC 1 cut(s) 203
MaeI CTAG 3 cut(s) 125, 350, 575
MaeII ACGT 2 cut(s) 306, 613
MaeIII GTNAC 1 cut(s) 698
MalI GATC 3 cut(s) 14, 662, 735
MboI GATC 3 cut(s) 12, 660, 733
MboII GAAGA 5 cut(s) 131, 164, 354, 383, 482
MlsI TGGCCA 1 cut(s) 532
MluNI TGGCCA 1 cut(s) 532
MlyI GAGTC 1 cut(s) 350
MmeI TCCRAC 3 cut(s) 210, 243, 641
MnlI CCTC 5 cut(s) 36, 105, 346, 370, 960
Mox20I TGGCCA 1 cut(s) 532
Mph1103I ATGCAT 1 cut(s) 6
MscI TGGCCA 1 cut(s) 532
MseI TTAA 6 cut(s) 183, 804, 863, 879, 921, 948
Msp20I TGGCCA 1 cut(s) 532
MspI CCGG 1 cut(s) 761
Mva1269I GAATGC 1 cut(s) 466
MwoI GCNNNNNNNGC 1 cut(s) 461
NcoI CCATGG 1 cut(s) 914
NdeII GATC 3 cut(s) 12, 660, 733
NlaIII CATG 6 cut(s) 584, 625, 772, 841, 918, 997
NlaIV GGNNCC 1 cut(s) 645
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 584, 997
PaeI GCATGC 1 cut(s) 584
PctI GAATGC 1 cut(s) 466
PfeI GAWTC 2 cut(s) 68, 757
PkrI GCNGC 1 cut(s) 193
PleI GAGTC 1 cut(s) 350
PmaCI CACGTG 1 cut(s) 307
PmlI CACGTG 1 cut(s) 307
PpsI GAGTC 1 cut(s) 350
Ppu21I YACGTR 1 cut(s) 307
PpuMI RGGWCCY 1 cut(s) 675
PshBI ATTAAT 1 cut(s) 183
PsiI TTATAA 1 cut(s) 479
Psp5II RGGWCCY 1 cut(s) 675
PspCI CACGTG 1 cut(s) 307
PspN4I GGNNCC 1 cut(s) 645
PspPI GGNCC 1 cut(s) 675
PspPPI RGGWCCY 1 cut(s) 675
PstI CTGCAG 1 cut(s) 193
RsaI GTAC 4 cut(s) 171, 524, 634, 992
RsaNI GTAC 4 cut(s) 170, 523, 633, 991
SaqAI TTAA 6 cut(s) 183, 804, 863, 879, 921, 948
SatI GCNGC 1 cut(s) 192
Sau3AI GATC 3 cut(s) 12, 660, 733
Sau96I GGNCC 1 cut(s) 675
SchI GAGTC 1 cut(s) 350
SfcI CTRYAG 1 cut(s) 189
SinI GGWCC 1 cut(s) 675
SphI GCATGC 1 cut(s) 584
SspI AATATT 1 cut(s) 899
SspMI CTAG 3 cut(s) 125, 350, 575
StyI CCWWGG 2 cut(s) 124, 914
TaiI ACGT 2 cut(s) 309, 616
TaqI TCGA 3 cut(s) 663, 732, 782
TatI WGTACW 3 cut(s) 169, 632, 990
TfiI GAWTC 2 cut(s) 68, 757
Tru1I TTAA 6 cut(s) 183, 804, 863, 879, 921, 948
Tru9I TTAA 6 cut(s) 183, 804, 863, 879, 921, 948
TscAI CASTG 1 cut(s) 511
TseI GCWGC 1 cut(s) 191
TspDTI ATGAA 5 cut(s) 64, 180, 225, 506, 1050
TspRI CASTG 1 cut(s) 511
VpaK11BI GGWCC 1 cut(s) 675
VspI ATTAAT 1 cut(s) 183
XapI RAATTY 2 cut(s) 395, 778
XceI RCATGY 2 cut(s) 584, 997
XcmI CCANNNNNNNNNTGG 1 cut(s) 654
XmaJI CCTAGG 1 cut(s) 124
XspI CTAG 3 cut(s) 125, 350, 575
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.