Rh7AG412100

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
55191429 .. 55226818
35390 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG412100.1

Sequence Viewer

Length: 1224 bp
ATGAAAAAGCTATACCTCCTCATTAGAGCTTCTGATGCCAAATCTGCCACACATCGCATGCACAATGAGATCACAAGGAAAGAGCTGTTCAGAAATTTAAGGAAGAAATGGGGTGCAAATTTTGACTCCTTCATATTAGAAAAAGTTGTTGCTCTTCCAGGAGACATAACATATACAAGTCTACTAGGAGCAAACGAAATCAGACTAAGGGACCAACTGTGCAATGAGATACAAATCATCCTTAACTCTGCAGCCACCCTCAATTTTGATGAGAGGTATGATGTTGCTCTGGACGTTAATACATTTGGAGTTTTGAATGTGCTGAGCTTTGCAAAAATGTGTTTAAGGCTAGAGATACTTGTCCACATATCTACTGCTTATGTATGTGGTGAAAAGGCTGGGCTCATAGTCGAGGATTTCTCTTTAATGGATGAGCTAGTAAAGAGAAGCACTAAATCCGACCTTGCAATAGTGGAAAAAACAGTAGCAGACAAGATATTGAAAGAACTCAAAGCACAAGATACTTCTGAAAAATTCATTACAAAGAGGATGAAGGACTTGGGCACTACAAGAACCGTTGATAGTGTAATTAGTGGATACTGGAGAGGGAACTTGACATGCCTACCAATGGATCCTACCTCAGTGTTAGATATGATTCCAGTTGACATGCTAGTAAATTCAATAATTACAGCAATCGTAATGAATGGTAATAAATCTTCTGGAATCATCTACCATGTGGGGACCTCATTAAGAAACCCTATATATATGTCCGAGATGATGAGTTTTTTGTTCCAATACTGCACCACAAATCCACTGCTTCATAAGGATGGAAGCCCTATCAAGATTGACAGGCTGAAAATGTTCAAGACTATGGACACTTTTCGCTTCTACATGCAAATTCGCTTCATGCTACCATTAGAGGTAGTGAAGCTCCTAAATAAAGAATTTGACCAGTATTTCAGAGATGTGTACGTTAGCCATAATCGGAAGCTCACATCGGTGATGCGGTTAGCTGAGCTATATGAACCCTATTTGCTATTCAAGGCAATCTTTGACGACACCAATTCGGAGGACTTGAGAAGGATGGCAAGTAAGAAATACACAGATGCCGAAATTTTCAATTTTGATCCAAAATGCATTAATTGGGAAGACTACGTTATGCGTACTCACATCCCTGGCCTCTGGAAAAACGTTATGACCAAGAAGAGTCACAGCCGGCTTTGA

Protein Analysis

407

Amino Acids

47.12

Weight (kDa)

8.97

Isoelectric Point (pI)

34.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_4 PF07993 2 - 228 1.4e-32 Male sterility protein
Sterile PF03015 303 - 399 1.8e-14 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 181
AciI CCGC 1 cut(s) 1006
AclI AACGTT 1 cut(s) 1191
AclWI GGATC 3 cut(s) 626, 639, 1121
AcsI RAATTY 7 cut(s) 94, 118, 533, 676, 897, 944, 1113
AfaI GTAC 2 cut(s) 971, 1165
AfiI CCNNNNNNNGG 1 cut(s) 628
AgsI TTSAA 6 cut(s) 316, 502, 681, 865, 1042, 1120
AjnI CCWGG 2 cut(s) 157, 1174
AleI CACNNNNGTG 1 cut(s) 998
AluBI AGCT 9 cut(s) 10, 29, 85, 327, 436, 931, 991, 1013, 1018
AluI AGCT 9 cut(s) 10, 29, 85, 327, 436, 931, 991, 1013, 1018
Alw26I GTCTC 1 cut(s) 156
AlwI GGATC 3 cut(s) 626, 639, 1121
AoxI GGCC 1 cut(s) 1177
ApeKI GCWGC 1 cut(s) 251
ApoI RAATTY 7 cut(s) 94, 118, 533, 676, 897, 944, 1113
AseI ATTAAT 1 cut(s) 1140
Asp700I GAANNNNTTC 1 cut(s) 860
AspS9I GGNCC 2 cut(s) 211, 741
AsuHPI GGTGA 2 cut(s) 401, 1012
AvaII GGWCC 2 cut(s) 211, 741
BaeGI GKGCMC 1 cut(s) 566
BamHI GGATCC 1 cut(s) 631
BanII GRGCYC 1 cut(s) 405
BarI GAAGNNNNNNTAC 2 cut(s) 700, 732
BbsI GAAGAC 1 cut(s) 1155
BbvI GCAGC 1 cut(s) 263
BccI CCATC 2 cut(s) 821, 1078
BciT130I CCWGG 2 cut(s) 159, 1176
BciVI GTATCC 1 cut(s) 590
BcoDI GTCTC 1 cut(s) 156
BfaI CTAG 4 cut(s) 185, 350, 437, 671
BfmI CTRYAG 1 cut(s) 249
BfuI GTATCC 1 cut(s) 590
BisI GCNGC 1 cut(s) 252
BlpI GCTNAGC 2 cut(s) 323, 1014
BlsI GCNGC 1 cut(s) 253
Bme1390I CCNGG 2 cut(s) 159, 1176
Bme18I GGWCC 2 cut(s) 211, 741
BmgT120I GGNCC 2 cut(s) 211, 741
BmiI GGNNCC 3 cut(s) 212, 633, 742
BmrFI CCNGG 2 cut(s) 159, 1176
BmsI GCATC 3 cut(s) 25, 993, 1096
BpiI GAAGAC 1 cut(s) 1155
BplI GAGNNNNNCTC 2 cut(s) 404, 436
BpmI CTGGAG 1 cut(s) 622
Bpu1102I GCTNAGC 2 cut(s) 323, 1014
BpuEI CTTGAG 1 cut(s) 1096
BsaBI GATNNNNATC 1 cut(s) 233
BsaJI CCNNGG 1 cut(s) 1174
Bsc4I CCNNNNNNNGG 1 cut(s) 628
Bse118I RCCGGY 1 cut(s) 1215
Bse1I ACTGG 3 cut(s) 605, 659, 952
Bse3DI GCAATG 1 cut(s) 229
Bse8I GATNNNNATC 1 cut(s) 233
BseBI CCWGG 2 cut(s) 159, 1176
BseDI CCNNGG 1 cut(s) 1174
BseGI GGATG 6 cut(s) 237, 436, 555, 832, 1089, 1170
BseJI GATNNNNATC 1 cut(s) 233
BseLI CCNNNNNNNGG 1 cut(s) 628
BseMI GCAATG 1 cut(s) 229
BseMII CTCAG 3 cut(s) 314, 654, 1005
BseNI ACTGG 3 cut(s) 605, 659, 952
BseRI GAGGAG 1 cut(s) 8
BseSI GKGCMC 1 cut(s) 566
BseXI GCAGC 1 cut(s) 263
BseYI CCCAGC 1 cut(s) 398
BsgI GTGCAG 1 cut(s) 784
BshFI GGCC 1 cut(s) 1179
BsiSI CCGG 1 cut(s) 1216
BslFI GGGAC 2 cut(s) 224, 754
BslI CCNNNNNNNGG 1 cut(s) 628
BsmAI GTCTC 1 cut(s) 156
BsmFI GGGAC 2 cut(s) 224, 754
BsnI GGCC 1 cut(s) 1179
Bsp1286I GDGCHC 2 cut(s) 405, 566
Bsp143I GATC 3 cut(s) 69, 631, 1126
Bsp1720I GCTNAGC 2 cut(s) 323, 1014
BspACI CCGC 1 cut(s) 1006
BspANI GGCC 1 cut(s) 1179
BspCNI CTCAG 3 cut(s) 315, 653, 1006
BspLI GGNNCC 3 cut(s) 212, 633, 742
BspMAI CTGCAG 1 cut(s) 253
BspPI GGATC 3 cut(s) 626, 639, 1121
BspQI GCTCTTC 1 cut(s) 159
BsrDI GCAATG 1 cut(s) 229
BsrFI RCCGGY 1 cut(s) 1215
BsrI ACTGG 3 cut(s) 605, 659, 952
BssAI RCCGGY 1 cut(s) 1215
BssECI CCNNGG 1 cut(s) 1174
BssMI GATC 3 cut(s) 69, 631, 1126
Bst2UI CCWGG 2 cut(s) 159, 1176
Bst4CI ACNGT 3 cut(s) 219, 484, 577
Bst6I CTCTTC 2 cut(s) 159, 1199
BstC8I GCNNGC 2 cut(s) 59, 1217
BstDEI CTNAG 4 cut(s) 206, 323, 640, 1014
BstF5I GGATG 6 cut(s) 237, 436, 555, 832, 1089, 1170
BstKTI GATC 3 cut(s) 72, 634, 1129
BstMAI GTCTC 1 cut(s) 156
BstMBI GATC 3 cut(s) 69, 631, 1126
BstMWI GCNNNNNNNGC 2 cut(s) 35, 44
BstNI CCWGG 2 cut(s) 159, 1176
BstNSI RCATGY 4 cut(s) 61, 621, 670, 895
BstSCI CCNGG 2 cut(s) 157, 1174
BstSFI CTRYAG 1 cut(s) 249
BstSLI GKGCMC 1 cut(s) 566
BstV1I GCAGC 1 cut(s) 263
BstV2I GAAGAC 1 cut(s) 1155
BstX2I RGATCY 1 cut(s) 631
BstYI RGATCY 1 cut(s) 631
BsuI GTATCC 1 cut(s) 590
BsuRI GGCC 1 cut(s) 1179
BtgZI GCGATG 1 cut(s) 38
BtsCI GGATG 6 cut(s) 237, 436, 555, 832, 1089, 1170
BtsI GCAGTG 1 cut(s) 812
BtsIMutI CAGTG 2 cut(s) 648, 812
Cac8I GCNNGC 2 cut(s) 59, 1217
Cfr10I RCCGGY 1 cut(s) 1215
Cfr13I GGNCC 2 cut(s) 211, 741
Csp6I GTAC 2 cut(s) 970, 1164
CviAII CATG 6 cut(s) 58, 618, 667, 734, 892, 907
CviQI GTAC 2 cut(s) 970, 1164
DdeI CTNAG 4 cut(s) 206, 323, 640, 1014
DpnI GATC 3 cut(s) 71, 633, 1128
DpnII GATC 3 cut(s) 69, 631, 1126
Eam1104I CTCTTC 2 cut(s) 159, 1199
EarI CTCTTC 2 cut(s) 159, 1199
Eco24I GRGCYC 1 cut(s) 405
Eco47I GGWCC 2 cut(s) 211, 741
EcoO109I RGGNCCY 1 cut(s) 741
EcoRII CCWGG 2 cut(s) 157, 1174
EcoT22I ATGCAT 1 cut(s) 1139
EcoT38I GRGCYC 1 cut(s) 405
FaeI CATG 6 cut(s) 61, 621, 670, 737, 895, 910
FalI AAGNNNNNCTT 2 cut(s) 1034, 1066
FaqI GGGAC 2 cut(s) 224, 754
FatI CATG 6 cut(s) 57, 617, 666, 733, 891, 906
FblI GTMKAC 1 cut(s) 181
Fnu4HI GCNGC 1 cut(s) 252
FokI GGATG 6 cut(s) 224, 443, 562, 839, 1096, 1157
FriOI GRGCYC 1 cut(s) 405
Fsp4HI GCNGC 1 cut(s) 252
FspBI CTAG 4 cut(s) 185, 350, 437, 671
GluI GCNGC 1 cut(s) 252
GsaI CCCAGC 1 cut(s) 402
GsuI CTGGAG 1 cut(s) 622
HaeIII GGCC 1 cut(s) 1179
HapII CCGG 1 cut(s) 1216
Hin1II CATG 6 cut(s) 61, 621, 670, 737, 895, 910
HincII GTYRAC 1 cut(s) 664
HindII GTYRAC 1 cut(s) 664
HinfI GANTC 4 cut(s) 125, 655, 723, 1207
HpaII CCGG 1 cut(s) 1216
HphI GGTGA 2 cut(s) 401, 1012
Hpy166II GTNNAC 4 cut(s) 182, 364, 664, 970
Hpy188I TCNGA 9 cut(s) 34, 92, 203, 460, 529, 772, 962, 987, 1069
Hpy188III TCNNGA 5 cut(s) 290, 720, 841, 865, 1183
Hpy8I GTNNAC 4 cut(s) 182, 364, 664, 970
HpyAV CCTTC 3 cut(s) 139, 547, 1074
HpyCH4III ACNGT 3 cut(s) 219, 484, 577
HpyCH4IV ACGT 4 cut(s) 294, 972, 1155, 1191
HpyCH4V TGCA 9 cut(s) 61, 116, 222, 251, 332, 467, 801, 895, 1137
HpyF10VI GCNNNNNNNGC 2 cut(s) 35, 44
HpyF3I CTNAG 4 cut(s) 206, 323, 640, 1014
HpySE526I ACGT 4 cut(s) 294, 972, 1155, 1191
Hsp92II CATG 6 cut(s) 61, 621, 670, 737, 895, 910
KroI GCCGGC 1 cut(s) 1215
KroNI GCCGGC 1 cut(s) 1217
Kzo9I GATC 3 cut(s) 69, 631, 1126
LguI GCTCTTC 1 cut(s) 159
LmnI GCTCC 2 cut(s) 188, 936
Lsp1109I GCAGC 1 cut(s) 263
LweI GCATC 3 cut(s) 25, 993, 1096
MaeI CTAG 4 cut(s) 185, 350, 437, 671
MaeII ACGT 4 cut(s) 294, 972, 1155, 1191
MaeIII GTNAC 1 cut(s) 1208
MalI GATC 3 cut(s) 71, 633, 1128
MboI GATC 3 cut(s) 69, 631, 1126
MboII GAAGA 5 cut(s) 115, 146, 708, 1160, 1216
MflI RGATCY 1 cut(s) 631
MhlI GDGCHC 2 cut(s) 405, 566
MlyI GAGTC 2 cut(s) 119, 1216
MmeI TCCRAC 1 cut(s) 483
Mph1103I ATGCAT 1 cut(s) 1139
MroNI GCCGGC 1 cut(s) 1215
MroXI GAANNNNTTC 1 cut(s) 860
MseI TTAA 7 cut(s) 98, 243, 297, 344, 425, 749, 1140
MslI CAYNNNNRTG 2 cut(s) 825, 998
MspI CCGG 1 cut(s) 1216
MspR9I CCNGG 2 cut(s) 159, 1176
MvaI CCWGG 2 cut(s) 159, 1176
MwoI GCNNNNNNNGC 2 cut(s) 35, 44
NaeI GCCGGC 1 cut(s) 1217
NdeII GATC 3 cut(s) 69, 631, 1126
NgoMIV GCCGGC 1 cut(s) 1215
NlaIII CATG 6 cut(s) 61, 621, 670, 737, 895, 910
NlaIV GGNNCC 3 cut(s) 212, 633, 742
NmuCI GTSAC 1 cut(s) 1208
NsiI ATGCAT 1 cut(s) 1139
NspI RCATGY 4 cut(s) 61, 621, 670, 895
OliI CACNNNNGTG 1 cut(s) 998
PaeI GCATGC 1 cut(s) 61
PciSI GCTCTTC 1 cut(s) 159
PdiI GCCGGC 1 cut(s) 1217
PdmI GAANNNNTTC 1 cut(s) 860
PfeI GAWTC 2 cut(s) 655, 723
PfoI TCCNGGA 1 cut(s) 157
PkrI GCNGC 1 cut(s) 253
PleI GAGTC 2 cut(s) 119, 1215
PpsI GAGTC 2 cut(s) 119, 1215
PpuMI RGGWCCY 1 cut(s) 741
PshBI ATTAAT 1 cut(s) 1140
Psp1406I AACGTT 1 cut(s) 1191
Psp5II RGGWCCY 1 cut(s) 741
Psp6I CCWGG 2 cut(s) 157, 1174
PspFI CCCAGC 1 cut(s) 398
PspGI CCWGG 2 cut(s) 157, 1174
PspN4I GGNNCC 3 cut(s) 212, 633, 742
PspPI GGNCC 2 cut(s) 211, 741
PspPPI RGGWCCY 1 cut(s) 741
PstI CTGCAG 1 cut(s) 253
PsuI RGATCY 1 cut(s) 631
RsaI GTAC 2 cut(s) 971, 1165
RsaNI GTAC 2 cut(s) 970, 1164
RseI CAYNNNNRTG 2 cut(s) 825, 998
SapI GCTCTTC 1 cut(s) 159
SaqAI TTAA 7 cut(s) 98, 243, 297, 344, 425, 749, 1140
SatI GCNGC 1 cut(s) 252
Sau3AI GATC 3 cut(s) 69, 631, 1126
Sau96I GGNCC 2 cut(s) 211, 741
SchI GAGTC 2 cut(s) 119, 1216
ScrFI CCNGG 2 cut(s) 159, 1176
SduI GDGCHC 2 cut(s) 405, 566
SfaNI GCATC 3 cut(s) 25, 993, 1096
SfcI CTRYAG 1 cut(s) 249
SinI GGWCC 2 cut(s) 211, 741
SmiMI CAYNNNNRTG 2 cut(s) 825, 998
SmlI CTYRAG 1 cut(s) 1075
SmoI CTYRAG 1 cut(s) 1075
SphI GCATGC 1 cut(s) 61
SsiI CCGC 1 cut(s) 1006
SspMI CTAG 4 cut(s) 185, 350, 437, 671
StyD4I CCNGG 2 cut(s) 157, 1174
TaaI ACNGT 3 cut(s) 219, 484, 577
TaiI ACGT 4 cut(s) 297, 975, 1158, 1194
TaqI TCGA 1 cut(s) 411
TfiI GAWTC 2 cut(s) 655, 723
Tru1I TTAA 7 cut(s) 98, 243, 297, 344, 425, 749, 1140
Tru9I TTAA 7 cut(s) 98, 243, 297, 344, 425, 749, 1140
TscAI CASTG 2 cut(s) 648, 819
TseFI GTSAC 1 cut(s) 1208
TseI GCWGC 1 cut(s) 251
Tsp45I GTSAC 1 cut(s) 1208
TspDTI ATGAA 8 cut(s) 17, 121, 526, 566, 716, 809, 895, 1038
TspRI CASTG 2 cut(s) 648, 819
VpaK11BI GGWCC 2 cut(s) 211, 741
VspI ATTAAT 1 cut(s) 1140
XapI RAATTY 7 cut(s) 94, 118, 533, 676, 897, 944, 1113
XceI RCATGY 4 cut(s) 61, 621, 670, 895
XmiI GTMKAC 1 cut(s) 181
XmnI GAANNNNTTC 1 cut(s) 860
XspI CTAG 4 cut(s) 185, 350, 437, 671
Zsp2I ATGCAT 1 cut(s) 1139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.