RLG00000014654

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
55806444 .. 55812451
6008 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014654

Sequence Viewer

Length: 1395 bp
ATGGAATTTGAGAGCATTCTAGGATACCTGGAGAACAAGATTATCCTAATTACTGGAGCTACTGGTTTTGTAGGAAAAGTGTTGGTGGAGAAAATACTAAGAGTTCAGCCAAATGTGAAAAAGTTGGAGAAATGGGCGACAAATTTTGATTCCTTCATATCAGAAAAGGTTGTCGCTCTCTCAGGAGACGTAACTTTGAAAGATCTAGGAGTGAAGGAAATCAAAGTAAAGGAAGAACTGTTCAATGGGATACAGATAATAATTAATTCTGCAGCAAACACAAAGTGGGATGAAAGGTATGATGTTGCACTGGAAGTGAATACATTTGGAGTTTTGAATATCTTAGACTTTGCAAAGAAATGCTTAAATTTGGAGATGGTTGTTCACATGTCAACAGCTTATGTGTCTAGTGATAGGGCAGGGCTGATACTAGAGGACTCATCTTCAATGGATGAGATGGCAAGAAAAACTACTCATGATGTTGACTTGAAAGAACATGAAAAGAAGATGGTGGAGTGCAAACTAAAAGAACTACAAGCACAAGACGCTTCCGAAGAAGTTATTACAAATACAATGAAGGACTTTGGCACCTCAAGGGCTAAGTTGTATGGATGGGAAAATACCTATTTATTAACAAAGGTAATGGGAGAAATGTATCTAGGACACTCGAAAGGTAACCTCTCTGTTGTTGTGATACGTCCAACTCTGATTACCAGCACTTACAAGGAGCCATTTTCTGGCTGGATTGAAGGTTTCAGACTGTATGATAGCCTAATTGCCAGTTATTGGAAAGGGCAGCTTACATGTATACCTGTTGATCCTTTGTCAGTAGTAGATTTGATTCCAGTTGACATGGTGGTAAATTCAATTATTACAGCAATGGTAGTCAATGCAAATACATCTCGTAAAGCAATTTACCATGTTGGAACCTCTTTGCGGAATCCTCTTAAATTCTCTGATTTTAACAAATTTATGTTCCAATACTGCACAAAAAATCCATGGATTTACAATGATGGAAGGCCTGTCAAGGTTGGCAAGTTAAAAATGGTTAGAACCATGGCCGCTTTTCGCTGGTACATGCAACCATTGCAGGGATTAAAGTTCTTGAATAAAGAATTTGACCAATGTTTCCGAGATGTATGCCTTAACGATGACTGGAAAGACGAATCGGTGATAGGGTTGATTGAGTTGAACGAACGAATTTTGCTATTCAAGGGGATCTTTGACGACACCAATTCAGAGGAATTGCGAAAGATAGCAAATTGGAACTACATTGATGCAGAAAATTTTAATTTTAATCCAAAATGCATTGACTGGGAAGATTACTATATCCATATTCACATTCCTGGCCTTGCGAAGAATGTTATTTTCAAACACAGTCAAAGCCGGCTTTGA

Protein Analysis

465

Amino Acids

53.26

Weight (kDa)

6.14

Isoelectric Point (pI)

32.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Epimerase PF01370 15 - 141 1.5e-10 NAD dependent epimerase/dehydratase family
3Beta_HSD PF01073 16 - 172 5.6e-07 3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd PF16363 16 - 133 2.1e-06 GDP-mannose 4,6 dehydratase
NAD_binding_4 PF07993 17 - 41 3.4e-06 Male sterility protein
NAD_binding_4 PF07993 52 - 290 6.9e-48 Male sterility protein
Sterile PF03015 395 - 455 7.6e-08 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 587
AccB7I CCANNNNNTGG 2 cut(s) 737, 786
AccI GTMKAC 1 cut(s) 808
AciI CCGC 2 cut(s) 937, 1062
AclWI GGATC 2 cut(s) 812, 1226
AcoI YGGCCR 1 cut(s) 1059
AcsI RAATTY 9 cut(s) 5, 142, 367, 862, 950, 968, 1115, 1200, 1285
AdeI CACNNNGTG 1 cut(s) 285
AfaI GTAC 1 cut(s) 1076
AfiI CCNNNNNNNGG 4 cut(s) 737, 786, 936, 1091
AflIII ACRYGT 2 cut(s) 387, 803
AjnI CCWGG 2 cut(s) 27, 1345
AloI GAACNNNNNNTCC 2 cut(s) 224, 256
AluBI AGCT 3 cut(s) 59, 398, 799
AluI AGCT 3 cut(s) 59, 398, 799
Alw26I GTCTC 1 cut(s) 180
AlwI GGATC 2 cut(s) 812, 1226
AoxI GGCC 3 cut(s) 1019, 1059, 1348
ApeKI GCWGC 2 cut(s) 272, 796
ApoI RAATTY 9 cut(s) 5, 142, 367, 862, 950, 968, 1115, 1200, 1285
AseI ATTAAT 1 cut(s) 264
AsuHPI GGTGA 1 cut(s) 1183
BanI GGYRCC 1 cut(s) 587
BbvI GCAGC 2 cut(s) 284, 808
BccI CCATC 5 cut(s) 370, 451, 502, 606, 1007
BcgI CGANNNNNNTGC 2 cut(s) 1122, 1156
BciT130I CCWGG 2 cut(s) 29, 1347
BciVI GTATCC 2 cut(s) 17, 243
BcoDI GTCTC 1 cut(s) 180
BfaI CTAG 5 cut(s) 20, 206, 408, 431, 659
BfmI CTRYAG 1 cut(s) 270
BfuI GTATCC 2 cut(s) 17, 243
BglII AGATCT 1 cut(s) 202
BisI GCNGC 3 cut(s) 273, 797, 1062
BlsI GCNGC 3 cut(s) 274, 798, 1063
Bme1390I CCNGG 2 cut(s) 29, 1347
BmiI GGNNCC 3 cut(s) 589, 729, 928
BmrFI CCNGG 2 cut(s) 29, 1347
BmrI ACTGGG 1 cut(s) 1324
BmsI GCATC 1 cut(s) 1267
BmuI ACTGGG 1 cut(s) 1324
BpmI CTGGAG 2 cut(s) 50, 75
BpuEI CTTGAG 1 cut(s) 577
BsaJI CCNNGG 2 cut(s) 998, 1056
Bsc4I CCNNNNNNNGG 4 cut(s) 737, 786, 936, 1091
Bse118I RCCGGY 1 cut(s) 1386
Bse1I ACTGG 7 cut(s) 58, 67, 315, 780, 845, 1160, 1319
Bse3DI GCAATG 2 cut(s) 885, 1085
BseBI CCWGG 2 cut(s) 29, 1347
BseDI CCNNGG 2 cut(s) 998, 1056
BseGI GGATG 3 cut(s) 295, 457, 617
BseLI CCNNNNNNNGG 4 cut(s) 737, 786, 936, 1091
BseMI GCAATG 2 cut(s) 885, 1085
BseMII CTCAG 1 cut(s) 195
BseNI ACTGG 7 cut(s) 58, 67, 315, 780, 845, 1160, 1319
BseXI GCAGC 2 cut(s) 284, 808
BsgI GTGCAG 1 cut(s) 970
BshFI GGCC 3 cut(s) 1021, 1061, 1350
BshNI GGYRCC 1 cut(s) 587
BsiSI CCGG 1 cut(s) 1387
BslI CCNNNNNNNGG 4 cut(s) 737, 786, 936, 1091
BsmAI GTCTC 1 cut(s) 180
BsmBI CGTCTC 1 cut(s) 180
BsmI GAATGC 1 cut(s) 15
BsnI GGCC 3 cut(s) 1021, 1061, 1350
Bsp143I GATC 3 cut(s) 202, 817, 1218
Bsp19I CCATGG 2 cut(s) 998, 1056
BspACI CCGC 2 cut(s) 937, 1062
BspANI GGCC 3 cut(s) 1021, 1061, 1350
BspCNI CTCAG 1 cut(s) 194
BspHI TCATGA 1 cut(s) 475
BspLI GGNNCC 3 cut(s) 589, 729, 928
BspMAI CTGCAG 1 cut(s) 274
BspPI GGATC 2 cut(s) 812, 1226
BspT107I GGYRCC 1 cut(s) 587
BsrDI GCAATG 2 cut(s) 885, 1085
BsrFI RCCGGY 1 cut(s) 1386
BsrI ACTGG 7 cut(s) 58, 67, 315, 780, 845, 1160, 1319
BssAI RCCGGY 1 cut(s) 1386
BssECI CCNNGG 2 cut(s) 998, 1056
BssMI GATC 3 cut(s) 202, 817, 1218
BssNAI GTATAC 1 cut(s) 809
BssT1I CCWWGG 2 cut(s) 998, 1056
Bst1107I GTATAC 1 cut(s) 809
Bst2UI CCWGG 2 cut(s) 29, 1347
Bst4CI ACNGT 3 cut(s) 240, 762, 1379
BstAPI GCANNNNNTGC 1 cut(s) 1087
BstC8I GCNNGC 1 cut(s) 1388
BstDEI CTNAG 4 cut(s) 98, 181, 343, 600
BstDSI CCRYGG 2 cut(s) 998, 1056
BstEII GGTNACC 1 cut(s) 674
BstF5I GGATG 3 cut(s) 295, 457, 617
BstKTI GATC 3 cut(s) 205, 820, 1221
BstMAI GTCTC 1 cut(s) 180
BstMBI GATC 3 cut(s) 202, 817, 1218
BstMWI GCNNNNNNNGC 2 cut(s) 545, 1087
BstNI CCWGG 2 cut(s) 29, 1347
BstNSI RCATGY 3 cut(s) 391, 807, 1081
BstPI GGTNACC 1 cut(s) 674
BstSCI CCNGG 2 cut(s) 27, 1345
BstSFI CTRYAG 1 cut(s) 270
BstV1I GCAGC 2 cut(s) 284, 808
BstX2I RGATCY 2 cut(s) 202, 1218
BstYI RGATCY 2 cut(s) 202, 1218
BstZ17I GTATAC 1 cut(s) 809
BsuI GTATCC 2 cut(s) 17, 243
BsuRI GGCC 3 cut(s) 1021, 1061, 1350
BtgI CCRYGG 2 cut(s) 998, 1056
BtsCI GGATG 3 cut(s) 295, 457, 617
BtsIMutI CAGTG 1 cut(s) 308
Cac8I GCNNGC 1 cut(s) 1388
CciI TCATGA 1 cut(s) 475
Cfr10I RCCGGY 1 cut(s) 1386
CseI GACGC 1 cut(s) 554
Csp6I GTAC 1 cut(s) 1075
CviAII CATG 9 cut(s) 388, 476, 497, 804, 853, 920, 999, 1057, 1078
CviQI GTAC 1 cut(s) 1075
DdeI CTNAG 4 cut(s) 98, 181, 343, 600
DpnI GATC 3 cut(s) 204, 819, 1220
DpnII GATC 3 cut(s) 202, 817, 1218
DraIII CACNNNGTG 1 cut(s) 285
EaeI YGGCCR 1 cut(s) 1059
Eco130I CCWWGG 2 cut(s) 998, 1056
Eco147I AGGCCT 1 cut(s) 1021
Eco91I GGTNACC 1 cut(s) 674
EcoO65I GGTNACC 1 cut(s) 674
EcoRII CCWGG 2 cut(s) 27, 1345
EcoT14I CCWWGG 2 cut(s) 998, 1056
EcoT22I ATGCAT 1 cut(s) 1310
ErhI CCWWGG 2 cut(s) 998, 1056
Esp3I CGTCTC 1 cut(s) 180
FaeI CATG 9 cut(s) 391, 479, 500, 807, 856, 923, 1002, 1060, 1081
FalI AAGNNNNNCTT 6 cut(s) 347, 379, 783, 815, 1205, 1237
FatI CATG 9 cut(s) 387, 475, 496, 803, 852, 919, 998, 1056, 1077
FblI GTMKAC 1 cut(s) 808
Fnu4HI GCNGC 3 cut(s) 273, 797, 1062
FokI GGATG 3 cut(s) 302, 464, 624
Fsp4HI GCNGC 3 cut(s) 273, 797, 1062
FspBI CTAG 5 cut(s) 20, 206, 408, 431, 659
GluI GCNGC 3 cut(s) 273, 797, 1062
GsuI CTGGAG 2 cut(s) 50, 75
HaeIII GGCC 3 cut(s) 1021, 1061, 1350
HapII CCGG 1 cut(s) 1387
HgaI GACGC 1 cut(s) 554
Hin1II CATG 9 cut(s) 391, 479, 500, 807, 856, 923, 1002, 1060, 1081
HincII GTYRAC 3 cut(s) 393, 484, 850
HindII GTYRAC 3 cut(s) 393, 484, 850
HinfI GANTC 5 cut(s) 149, 437, 841, 940, 1166
HpaII CCGG 1 cut(s) 1387
HphI GGTGA 1 cut(s) 1183
Hpy166II GTNNAC 5 cut(s) 385, 393, 484, 809, 850
Hpy188I TCNGA 7 cut(s) 163, 553, 708, 758, 958, 1133, 1240
Hpy188III TCNNGA 3 cut(s) 183, 476, 1105
Hpy8I GTNNAC 5 cut(s) 385, 393, 484, 809, 850
HpyAV CCTTC 5 cut(s) 163, 208, 571, 743, 1011
HpyCH4III ACNGT 3 cut(s) 240, 762, 1379
HpyCH4IV ACGT 2 cut(s) 189, 697
HpyF10VI GCNNNNNNNGC 2 cut(s) 545, 1087
HpyF3I CTNAG 4 cut(s) 98, 181, 343, 600
HpySE526I ACGT 2 cut(s) 189, 697
Hsp92II CATG 9 cut(s) 391, 479, 500, 807, 856, 923, 1002, 1060, 1081
KroI GCCGGC 1 cut(s) 1386
KroNI GCCGGC 1 cut(s) 1388
Kzo9I GATC 3 cut(s) 202, 817, 1218
LmnI GCTCC 2 cut(s) 56, 727
Lsp1109I GCAGC 2 cut(s) 284, 808
LweI GCATC 1 cut(s) 1267
MaeI CTAG 5 cut(s) 20, 206, 408, 431, 659
MaeII ACGT 2 cut(s) 189, 697
MaeIII GTNAC 2 cut(s) 190, 674
MalI GATC 3 cut(s) 204, 819, 1220
MboI GATC 3 cut(s) 202, 817, 1218
MboII GAAGA 6 cut(s) 245, 435, 517, 566, 1331, 1369
MflI RGATCY 2 cut(s) 202, 1218
MlyI GAGTC 1 cut(s) 431
MmeI TCCRAC 3 cut(s) 105, 725, 904
MnlI CCTC 6 cut(s) 427, 601, 689, 940, 954, 1234
Mph1103I ATGCAT 1 cut(s) 1310
MroNI GCCGGC 1 cut(s) 1386
MspI CCGG 1 cut(s) 1387
MspR9I CCNGG 2 cut(s) 29, 1347
Mva1269I GAATGC 1 cut(s) 15
MvaI CCWGG 2 cut(s) 29, 1347
MwoI GCNNNNNNNGC 2 cut(s) 545, 1087
NaeI GCCGGC 1 cut(s) 1388
NcoI CCATGG 2 cut(s) 998, 1056
NdeII GATC 3 cut(s) 202, 817, 1218
NgoMIV GCCGGC 1 cut(s) 1386
NlaIII CATG 9 cut(s) 391, 479, 500, 807, 856, 923, 1002, 1060, 1081
NlaIV GGNNCC 3 cut(s) 589, 729, 928
NsiI ATGCAT 1 cut(s) 1310
NspI RCATGY 3 cut(s) 391, 807, 1081
PagI TCATGA 1 cut(s) 475
PceI AGGCCT 1 cut(s) 1021
PciI ACATGT 2 cut(s) 387, 803
PctI GAATGC 1 cut(s) 15
PdiI GCCGGC 1 cut(s) 1388
PfeI GAWTC 4 cut(s) 149, 841, 940, 1166
PflMI CCANNNNNTGG 2 cut(s) 737, 786
PkrI GCNGC 3 cut(s) 274, 798, 1063
PleI GAGTC 1 cut(s) 431
PpsI GAGTC 1 cut(s) 431
PscI ACATGT 2 cut(s) 387, 803
PshBI ATTAAT 1 cut(s) 264
Psp6I CCWGG 2 cut(s) 27, 1345
PspEI GGTNACC 1 cut(s) 674
PspGI CCWGG 2 cut(s) 27, 1345
PspN4I GGNNCC 3 cut(s) 589, 729, 928
PstI CTGCAG 1 cut(s) 274
PsuI RGATCY 2 cut(s) 202, 1218
RsaI GTAC 1 cut(s) 1076
RsaNI GTAC 1 cut(s) 1075
SatI GCNGC 3 cut(s) 273, 797, 1062
Sau3AI GATC 3 cut(s) 202, 817, 1218
SchI GAGTC 1 cut(s) 431
ScrFI CCNGG 2 cut(s) 29, 1347
SfaNI GCATC 1 cut(s) 1267
SfcI CTRYAG 1 cut(s) 270
SmlI CTYRAG 1 cut(s) 592
SmoI CTYRAG 1 cut(s) 592
SseBI AGGCCT 1 cut(s) 1021
SsiI CCGC 2 cut(s) 937, 1062
SspMI CTAG 5 cut(s) 20, 206, 408, 431, 659
StuI AGGCCT 1 cut(s) 1021
StyD4I CCNGG 2 cut(s) 27, 1345
StyI CCWWGG 2 cut(s) 998, 1056
TaaI ACNGT 3 cut(s) 240, 762, 1379
TaiI ACGT 2 cut(s) 192, 700
TaqI TCGA 1 cut(s) 668
TauI GCSGC 1 cut(s) 1064
TfiI GAWTC 4 cut(s) 149, 841, 940, 1166
TscAI CASTG 1 cut(s) 315
TseI GCWGC 2 cut(s) 272, 796
TspDTI ATGAA 4 cut(s) 145, 306, 513, 590
TspRI CASTG 1 cut(s) 315
Van91I CCANNNNNTGG 2 cut(s) 737, 786
VspI ATTAAT 1 cut(s) 264
XapI RAATTY 9 cut(s) 5, 142, 367, 862, 950, 968, 1115, 1200, 1285
XceI RCATGY 3 cut(s) 391, 807, 1081
XcmI CCANNNNNNNNNTGG 1 cut(s) 738
XmiI GTMKAC 1 cut(s) 808
XspI CTAG 5 cut(s) 20, 206, 408, 431, 659
Zsp2I ATGCAT 1 cut(s) 1310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.