Rh5AG290800

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
39859330 .. 39880822
21493 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG290800.1

Sequence Viewer

Length: 1368 bp
ATGGGGTTGGACAGCATAGTAGGTTATCTGCAGAATAAGACCATTTTGATCACTGGTGCAACTGGCTTCCTTGGAATGGTGTTTGTGGAGAAAATTCTAAGGGTGCAACCAAATGTGAAGAAGCTCTATCTTCTTGTAAGAGCCTCTGATACCAAGTCAGCAACACATCGCATGCAAGATGAGATTCTAGGGAAGGAATTGTTCAAGGTTCTGAGGGAGAAATGGGGGGCAGATTTTGATTCTTTCATTTCCGAAAAAGTTGTTGCTCTCCCAGGAGATGTCACTTTTGAGAACCTCGGAGTGAAAGAACCCAGATTGGTGGAAGAACTATACAATGAAATACAGATAATATTCAACTCTGCAGCCACCACCAACTTTGACGAAAGATATGATATTTCACTGGCGGTAAATACTTTTGGAGTTCTGCAAGTGTTAAGCTTTGCGAACAAATGTTTCAAACTACAAATACTTCTCCATGTATCAACTGCTTATGTGTGTGGGGAAAGGGCGGGGCTCATACCAGAAGACTCATCTTCAATGGAGAAGATGGTAAAGGAGATGGGTAATTTTGATTTTGAAGCAGTGGAAAAGGGCCTTGTGCAGGAGAAATTGAATGAACTAAAAGCACTAGATGCTTCAGAAGAAGTTGTTACAAACATAATGAAGGATTTCGGCATTAAAAGGGCTAGACTATATGGATGGCCAAACACGTATGTGTTCACAAAAGCAATGGGTGAAATATTTCTACAACGCTCGAAAGACAATTTGCCTCTTGTGGTTGTACGTCCAACAATAGTTACTAGCACTTACAAAGAACCATTTTCCGGTTGGATCCAAGGTTTCAGAACTATTGATAGTGTAATTGCTGGTTATTGCAAAGGCAAGCTGACATGCTTGCTTGTCGATCCTGCAACAGTACTCGATATGATTCCTGTTGACATGTTGGTAAATTCAATAATCATAGCAATGGTGGCAAATGCAAATCAGTCTTCTGGAAATATTATTTATCATGTCGGATCTTCACTGAGAAACCCTTTGAATTTCTTTCAAATGCACAACTTTATCTTCCAGTACTTCACCAAGAATCCATGGCTTGATAAGGATGGTAAGCCTGTCATTGTTACCAAGGGTACAATATTGACGACTATGGCTACTTTTCGCATGTACATGAATATTCGCTACATGCTACCTTTGAAGGCTAGTGGGCTAATACGGGTCCATATATACAAAAGCCCTAAAGCTCGGTTCTCTCAGTTCCTAGTAGTTGCAGCATATTCTGGAACTGGAACCGAACCGGAAGGATGCAAAACGGTTCGGGTCTTTGAAAAAACACCTCTCCCAAAACTATACACCCAACCGAACCGGTAG

Protein Analysis

455

Amino Acids

51.24

Weight (kDa)

9.0

Isoelectric Point (pI)

34.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Epimerase PF01370 15 - 179 6.3e-07 NAD dependent epimerase/dehydratase family
NAD_binding_4 PF07993 17 - 319 2.2e-72 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 404, 509
AclWI GGATC 4 cut(s) 826, 839, 899, 1024
AcoI YGGCCR 1 cut(s) 701
AcsI RAATTY 3 cut(s) 93, 949, 1039
AcuI CTGAAG 1 cut(s) 621
AfaI GTAC 5 cut(s) 783, 918, 1073, 1132, 1166
AfiI CCNNNNNNNGG 3 cut(s) 76, 601, 824
AflIII ACRYGT 2 cut(s) 708, 939
AgeI ACCGGT 1 cut(s) 1362
AjnI CCWGG 1 cut(s) 271
AleI CACNNNNGTG 1 cut(s) 713
AluBI AGCT 4 cut(s) 124, 438, 886, 1241
AluI AGCT 4 cut(s) 124, 438, 886, 1241
AlwI GGATC 4 cut(s) 826, 839, 899, 1024
AoxI GGCC 2 cut(s) 592, 701
ApeKI GCWGC 2 cut(s) 362, 1268
ApoI RAATTY 3 cut(s) 93, 949, 1039
AsiGI ACCGGT 1 cut(s) 1362
Asp700I GAANNNNTTC 2 cut(s) 668, 741
AspS9I GGNCC 2 cut(s) 592, 1216
AsuHPI GGTGA 2 cut(s) 746, 1069
AvaII GGWCC 1 cut(s) 1216
BalI TGGCCA 1 cut(s) 703
BamHI GGATCC 1 cut(s) 831
BanII GRGCYC 1 cut(s) 516
BbsI GAAGAC 2 cut(s) 531, 981
BbvI GCAGC 2 cut(s) 374, 1280
BccI CCATC 4 cut(s) 541, 553, 693, 1097
BciT130I CCWGG 1 cut(s) 273
BclI TGATCA 1 cut(s) 48
BfaI CTAG 6 cut(s) 188, 629, 687, 801, 1200, 1259
BfmI CTRYAG 2 cut(s) 29, 360
BisI GCNGC 2 cut(s) 363, 1269
BlsI GCNGC 2 cut(s) 364, 1270
BmcAI AGTACT 2 cut(s) 918, 1073
Bme1390I CCNGG 1 cut(s) 273
Bme18I GGWCC 1 cut(s) 1216
BmgT120I GGNCC 2 cut(s) 592, 1216
BmiI GGNNCC 3 cut(s) 833, 1217, 1288
BmrFI CCNGG 1 cut(s) 273
BmsI GCATC 2 cut(s) 622, 1292
BpiI GAAGAC 2 cut(s) 531, 981
BsaAI YACGTR 1 cut(s) 711
BsaJI CCNNGG 6 cut(s) 70, 271, 295, 835, 1088, 1125
BsaWI WCCGGW 3 cut(s) 824, 1294, 1362
Bsc4I CCNNNNNNNGG 3 cut(s) 76, 601, 824
Bse118I RCCGGY 1 cut(s) 1362
Bse1I ACTGG 5 cut(s) 58, 67, 405, 1069, 1288
Bse3DI GCAATG 2 cut(s) 735, 972
BseBI CCWGG 1 cut(s) 273
BseDI CCNNGG 6 cut(s) 70, 271, 295, 835, 1088, 1125
BseGI GGATG 3 cut(s) 704, 1108, 1307
BseLI CCNNNNNNNGG 3 cut(s) 76, 601, 824
BseMI GCAATG 2 cut(s) 735, 972
BseMII CTCAG 3 cut(s) 203, 1016, 1265
BseNI ACTGG 5 cut(s) 58, 67, 405, 1069, 1288
BseXI GCAGC 2 cut(s) 374, 1280
BsgI GTGCAG 1 cut(s) 620
BshFI GGCC 2 cut(s) 594, 703
BshTI ACCGGT 1 cut(s) 1362
BsiSI CCGG 3 cut(s) 825, 1295, 1363
BslI CCNNNNNNNGG 3 cut(s) 76, 601, 824
BsnI GGCC 2 cut(s) 594, 703
Bsp1286I GDGCHC 1 cut(s) 516
Bsp1407I TGTACA 1 cut(s) 1164
Bsp143I GATC 4 cut(s) 48, 831, 904, 1016
Bsp19I CCATGG 1 cut(s) 1088
BspACI CCGC 2 cut(s) 404, 509
BspANI GGCC 2 cut(s) 594, 703
BspCNI CTCAG 3 cut(s) 204, 1017, 1264
BspLI GGNNCC 3 cut(s) 833, 1217, 1288
BspMAI CTGCAG 2 cut(s) 33, 364
BspPI GGATC 4 cut(s) 826, 839, 899, 1024
BsrDI GCAATG 2 cut(s) 735, 972
BsrFI RCCGGY 1 cut(s) 1362
BsrGI TGTACA 1 cut(s) 1164
BsrI ACTGG 5 cut(s) 58, 67, 405, 1069, 1288
BssAI RCCGGY 1 cut(s) 1362
BssECI CCNNGG 6 cut(s) 70, 271, 295, 835, 1088, 1125
BssMI GATC 4 cut(s) 48, 831, 904, 1016
BssT1I CCWWGG 4 cut(s) 70, 835, 1088, 1125
Bst2UI CCWGG 1 cut(s) 273
Bst4CI ACNGT 2 cut(s) 916, 1312
BstAPI GCANNNNNTGC 1 cut(s) 632
BstAUI TGTACA 1 cut(s) 1164
BstBAI YACGTR 1 cut(s) 711
BstC8I GCNNGC 3 cut(s) 173, 884, 896
BstDEI CTNAG 4 cut(s) 98, 212, 1025, 1251
BstDSI CCRYGG 1 cut(s) 1088
BstENI CCTNNNNNAGG 1 cut(s) 599
BstF5I GGATG 3 cut(s) 704, 1108, 1307
BstKTI GATC 4 cut(s) 51, 834, 907, 1019
BstMBI GATC 4 cut(s) 48, 831, 904, 1016
BstMWI GCNNNNNNNGC 2 cut(s) 632, 971
BstNI CCWGG 1 cut(s) 273
BstNSI RCATGY 5 cut(s) 175, 894, 943, 1165, 1186
BstSCI CCNGG 1 cut(s) 271
BstSFI CTRYAG 2 cut(s) 29, 360
BstV1I GCAGC 2 cut(s) 374, 1280
BstV2I GAAGAC 2 cut(s) 531, 981
BstX2I RGATCY 2 cut(s) 831, 1016
BstXI CCANNNNNNTGG 1 cut(s) 319
BstYI RGATCY 2 cut(s) 831, 1016
BsuRI GGCC 2 cut(s) 594, 703
BtgI CCRYGG 1 cut(s) 1088
BtgZI GCGATG 1 cut(s) 152
BtsCI GGATG 3 cut(s) 704, 1108, 1307
BtsI GCAGTG 1 cut(s) 588
BtsIMutI CAGTG 4 cut(s) 51, 398, 588, 1022
Cac8I GCNNGC 3 cut(s) 173, 884, 896
Cfr10I RCCGGY 1 cut(s) 1362
Cfr13I GGNCC 2 cut(s) 592, 1216
Csp6I GTAC 5 cut(s) 782, 917, 1072, 1131, 1165
CspAI ACCGGT 1 cut(s) 1362
CspCI CAANNNNNGTGG 2 cut(s) 358, 393
CviAII CATG 9 cut(s) 172, 476, 891, 940, 1010, 1089, 1162, 1168, 1183
CviQI GTAC 5 cut(s) 782, 917, 1072, 1131, 1165
DdeI CTNAG 4 cut(s) 98, 212, 1025, 1251
DpnI GATC 4 cut(s) 50, 833, 906, 1018
DpnII GATC 4 cut(s) 48, 831, 904, 1016
EaeI YGGCCR 1 cut(s) 701
Eco130I CCWWGG 4 cut(s) 70, 835, 1088, 1125
Eco24I GRGCYC 1 cut(s) 516
Eco47I GGWCC 1 cut(s) 1216
Eco57I CTGAAG 1 cut(s) 621
EcoNI CCTNNNNNAGG 1 cut(s) 599
EcoO109I RGGNCCY 1 cut(s) 592
EcoRII CCWGG 1 cut(s) 271
EcoT14I CCWWGG 4 cut(s) 70, 835, 1088, 1125
EcoT38I GRGCYC 1 cut(s) 516
ErhI CCWWGG 4 cut(s) 70, 835, 1088, 1125
FaeI CATG 9 cut(s) 175, 479, 894, 943, 1013, 1092, 1165, 1171, 1186
FatI CATG 9 cut(s) 171, 475, 890, 939, 1009, 1088, 1161, 1167, 1182
FauI CCCGC 1 cut(s) 502
FbaI TGATCA 1 cut(s) 48
Fnu4HI GCNGC 2 cut(s) 363, 1269
FokI GGATG 3 cut(s) 711, 1115, 1314
FriOI GRGCYC 1 cut(s) 516
Fsp4HI GCNGC 2 cut(s) 363, 1269
FspBI CTAG 6 cut(s) 188, 629, 687, 801, 1200, 1259
GluI GCNGC 2 cut(s) 363, 1269
HaeIII GGCC 2 cut(s) 594, 703
HapII CCGG 3 cut(s) 825, 1295, 1363
Hin1II CATG 9 cut(s) 175, 479, 894, 943, 1013, 1092, 1165, 1171, 1186
HincII GTYRAC 1 cut(s) 937
HindII GTYRAC 1 cut(s) 937
HindIII AAGCTT 1 cut(s) 436
HinfI GANTC 5 cut(s) 184, 239, 527, 928, 1084
HpaII CCGG 3 cut(s) 825, 1295, 1363
HphI GGTGA 2 cut(s) 746, 1069
Hpy166II GTNNAC 2 cut(s) 720, 937
Hpy188I TCNGA 7 cut(s) 148, 213, 253, 299, 640, 845, 1016
Hpy188III TCNNGA 2 cut(s) 993, 1278
Hpy8I GTNNAC 2 cut(s) 720, 937
HpyAV CCTTC 4 cut(s) 187, 658, 1189, 1292
HpyCH4III ACNGT 2 cut(s) 916, 1312
HpyCH4IV ACGT 2 cut(s) 710, 784
HpyF10VI GCNNNNNNNGC 2 cut(s) 632, 971
HpyF3I CTNAG 4 cut(s) 98, 212, 1025, 1251
HpySE526I ACGT 2 cut(s) 710, 784
Hsp92II CATG 9 cut(s) 175, 479, 894, 943, 1013, 1092, 1165, 1171, 1186
Ksp22I TGATCA 1 cut(s) 48
Kzo9I GATC 4 cut(s) 48, 831, 904, 1016
Lsp1109I GCAGC 2 cut(s) 374, 1280
LweI GCATC 2 cut(s) 622, 1292
MaeI CTAG 6 cut(s) 188, 629, 687, 801, 1200, 1259
MaeII ACGT 2 cut(s) 710, 784
MaeIII GTNAC 4 cut(s) 280, 649, 796, 1120
MalI GATC 4 cut(s) 50, 833, 906, 1018
MboI GATC 4 cut(s) 48, 831, 904, 1016
MflI RGATCY 2 cut(s) 831, 1016
MhlI GDGCHC 1 cut(s) 516
MlsI TGGCCA 1 cut(s) 703
MluCI AATT 8 cut(s) 93, 197, 565, 608, 763, 861, 949, 1039
MluNI TGGCCA 1 cut(s) 703
MlyI GAGTC 1 cut(s) 521
MmeI TCCRAC 3 cut(s) 809, 812, 994
MnlI CCTC 5 cut(s) 154, 207, 305, 780, 1344
Mox20I TGGCCA 1 cut(s) 703
MroXI GAANNNNTTC 2 cut(s) 668, 741
MscI TGGCCA 1 cut(s) 703
MseI TTAA 2 cut(s) 434, 678
MslI CAYNNNNRTG 3 cut(s) 713, 965, 1166
Msp20I TGGCCA 1 cut(s) 703
MspI CCGG 3 cut(s) 825, 1295, 1363
MspR9I CCNGG 1 cut(s) 273
MvaI CCWGG 1 cut(s) 273
MwoI GCNNNNNNNGC 2 cut(s) 632, 971
NcoI CCATGG 1 cut(s) 1088
NdeII GATC 4 cut(s) 48, 831, 904, 1016
NlaIII CATG 9 cut(s) 175, 479, 894, 943, 1013, 1092, 1165, 1171, 1186
NlaIV GGNNCC 3 cut(s) 833, 1217, 1288
NmuCI GTSAC 1 cut(s) 280
NspI RCATGY 5 cut(s) 175, 894, 943, 1165, 1186
OliI CACNNNNGTG 1 cut(s) 713
PaeI GCATGC 1 cut(s) 175
PciI ACATGT 1 cut(s) 939
PdmI GAANNNNTTC 2 cut(s) 668, 741
PfeI GAWTC 4 cut(s) 184, 239, 928, 1084
PinAI ACCGGT 1 cut(s) 1362
PkrI GCNGC 2 cut(s) 364, 1270
PleI GAGTC 1 cut(s) 521
PpsI GAGTC 1 cut(s) 521
Ppu21I YACGTR 1 cut(s) 711
PscI ACATGT 1 cut(s) 939
Psp6I CCWGG 1 cut(s) 271
PspGI CCWGG 1 cut(s) 271
PspN4I GGNNCC 3 cut(s) 833, 1217, 1288
PspPI GGNCC 2 cut(s) 592, 1216
PstI CTGCAG 2 cut(s) 33, 364
PsuI RGATCY 2 cut(s) 831, 1016
RsaI GTAC 5 cut(s) 783, 918, 1073, 1132, 1166
RsaNI GTAC 5 cut(s) 782, 917, 1072, 1131, 1165
RseI CAYNNNNRTG 3 cut(s) 713, 965, 1166
SaqAI TTAA 2 cut(s) 434, 678
SatI GCNGC 2 cut(s) 363, 1269
Sau3AI GATC 4 cut(s) 48, 831, 904, 1016
Sau96I GGNCC 2 cut(s) 592, 1216
ScaI AGTACT 2 cut(s) 918, 1073
SchI GAGTC 1 cut(s) 521
ScrFI CCNGG 1 cut(s) 273
SduI GDGCHC 1 cut(s) 516
SfaNI GCATC 2 cut(s) 622, 1292
SfcI CTRYAG 2 cut(s) 29, 360
SinI GGWCC 1 cut(s) 1216
SmiMI CAYNNNNRTG 3 cut(s) 713, 965, 1166
SphI GCATGC 1 cut(s) 175
Sse9I AATT 8 cut(s) 93, 197, 565, 608, 763, 861, 949, 1039
SsiI CCGC 2 cut(s) 404, 509
SspI AATATT 5 cut(s) 351, 741, 1000, 1137, 1174
SspMI CTAG 6 cut(s) 188, 629, 687, 801, 1200, 1259
StyD4I CCNGG 1 cut(s) 271
StyI CCWWGG 4 cut(s) 70, 835, 1088, 1125
TaaI ACNGT 2 cut(s) 916, 1312
TaiI ACGT 2 cut(s) 713, 787
TaqI TCGA 3 cut(s) 755, 903, 921
TasI AATT 8 cut(s) 93, 197, 565, 608, 763, 861, 949, 1039
TatI WGTACW 3 cut(s) 916, 1071, 1164
TfiI GAWTC 4 cut(s) 184, 239, 928, 1084
Tru1I TTAA 2 cut(s) 434, 678
Tru9I TTAA 2 cut(s) 434, 678
TscAI CASTG 4 cut(s) 58, 405, 588, 1029
TseFI GTSAC 1 cut(s) 280
TseI GCWGC 2 cut(s) 362, 1268
Tsp45I GTSAC 1 cut(s) 280
TspDTI ATGAA 5 cut(s) 235, 351, 630, 677, 1184
TspRI CASTG 4 cut(s) 58, 405, 588, 1029
VpaK11BI GGWCC 1 cut(s) 1216
XagI CCTNNNNNAGG 1 cut(s) 599
XapI RAATTY 3 cut(s) 93, 949, 1039
XceI RCATGY 5 cut(s) 175, 894, 943, 1165, 1186
XcmI CCANNNNNNNNNTGG 1 cut(s) 825
XmnI GAANNNNTTC 2 cut(s) 668, 741
XspI CTAG 6 cut(s) 188, 629, 687, 801, 1200, 1259
ZrmI AGTACT 2 cut(s) 918, 1073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.