Rh6BG086800

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
13551368 .. 13556223
4856 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG086800.1

Sequence Viewer

Length: 1155 bp
ATGTCTTCAATAACGTATGACGTTGCACTGGAAGTGAATACGTTTGGAGTTTTGAATGTGTTAGACTTTGCAAAGAAATGCTTAAATCTGGAGATGGTTGTTCACGTGTCAACAGCTTCTGTGTCTGGTGAGAGGGCGGGGCTGATACTAGAGGACTCATCTTCAATGGATGAGATGGCAAGACAAACTACTCATGATGTTGACTTGAAAGAACATGAAAAGAAGATGGTGGAGCGCAAATTAAAAGAACTACAAGCACAGCACGCTTCTGAAGAAGTTATTACAAATACAATGAAGGACTTTGGCACTGCAAGGGCTAAGTTGTATGGATGGCCATATACCTATCTGTTTACAAAGGTAATGGGAGAAATGTATCTAAGACGCTTGAGAGGTAACCTATCTCTTGCTATTATACGTCCAACTCTGATTACCAGCACTTACAAGGAGCCATTTCCAGGCTGGATTGAAGGTTTCAGATCCTATGATAGCCTAATTGGTAGTTATTGGAAAGGGAAGCTCACATGTGTACCTGTCGATCCTATGTCAGTAACAGATATGATTCCGGTTGACATGGTGGTAAATTCAATTATTACAGCGATGGTAGTCAATGCGAATAAATCTTGTGAAATTATTTACCATGTTGGAACCTCATTACGAAATCCCCTTAAATTCTCTGATTTTCACAAATTTATGTTCCGATACTGCACAAAAAATCCATGGCTTTACAATGATGGAAGGCTTATCAAGGTTGGCAAGTTAAAAATGGTGAGGACCATGACCGCTTTTCGCTTGTACATGCAACCATTGCAGGGATTAAAGTTTTTGAATAAAGAATTTGACCAATATTTCCGAGATGTATACATTAACTATGACCGGAATGTCAAATCGGTGATACGGATGATTGAGTACTATATACCACTTTTGCTATTCCAGGGGATCTTTGACGACACCAATTCAGAAGAATTGCGAAGGATAGCAAGCGAGAACTACATTGATGCAGAAAATTTTAATTTCAACCCAAAATGCATTGACTGGGAAGATTATTATATCCATGCTCACATTCCTGGCCTTGCAAAGCATAAGCTACCACCATCGTCAGTGCCGCCACCAGCATCAAAACCACCACCGCCGTCAACACTGACACTAAAGCCATGA

Protein Analysis

384

Amino Acids

44.26

Weight (kDa)

8.57

Isoelectric Point (pI)

42.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_4 PF07993 5 - 196 3.1e-34 Male sterility protein
Sterile PF03015 292 - 360 1.4e-10 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 878
AccI GTMKAC 1 cut(s) 858
AciI CCGC 4 cut(s) 137, 780, 1103, 1127
AclWI GGATC 3 cut(s) 471, 530, 944
AcoI YGGCCR 1 cut(s) 332
AcsI RAATTY 5 cut(s) 580, 668, 686, 833, 1003
AcuI CTGAAG 1 cut(s) 291
AcvI CACGTG 1 cut(s) 106
AfaI GTAC 3 cut(s) 528, 794, 908
AfiI CCNNNNNNNGG 2 cut(s) 455, 809
AflIII ACRYGT 2 cut(s) 105, 521
AgsI TTSAA 8 cut(s) 9, 55, 165, 208, 467, 585, 826, 1015
AjnI CCWGG 3 cut(s) 454, 930, 1063
AluBI AGCT 3 cut(s) 116, 517, 1084
AluI AGCT 3 cut(s) 116, 517, 1084
AlwI GGATC 3 cut(s) 471, 530, 944
AlwNI CAGNNNCTG 1 cut(s) 119
AoxI GGCC 2 cut(s) 332, 1066
ApoI RAATTY 5 cut(s) 580, 668, 686, 833, 1003
AspLEI GCGC 1 cut(s) 237
AspS9I GGNCC 1 cut(s) 771
AsuHPI GGTGA 3 cut(s) 140, 778, 901
AvaII GGWCC 1 cut(s) 771
BaeI ACNNNNGTAYC 2 cut(s) 510, 543
BalI TGGCCA 1 cut(s) 334
BbrPI CACGTG 1 cut(s) 106
BccI CCATC 7 cut(s) 88, 169, 220, 324, 592, 725, 1099
BceAI ACGGC 1 cut(s) 1114
BciT130I CCWGG 3 cut(s) 456, 932, 1065
BfaI CTAG 1 cut(s) 149
BisI GCNGC 1 cut(s) 1103
BlsI GCNGC 1 cut(s) 1104
BmcAI AGTACT 1 cut(s) 908
Bme1390I CCNGG 3 cut(s) 456, 932, 1065
Bme18I GGWCC 1 cut(s) 771
BmgT120I GGNCC 1 cut(s) 771
BmiI GGNNCC 2 cut(s) 447, 646
BmrFI CCNGG 3 cut(s) 456, 932, 1065
BmrI ACTGGG 1 cut(s) 1042
BmsI GCATC 2 cut(s) 985, 1121
BmuI ACTGGG 1 cut(s) 1042
BpmI CTGGAG 1 cut(s) 110
BpuEI CTTGAG 1 cut(s) 406
BsaAI YACGTR 1 cut(s) 106
BsaJI CCNNGG 2 cut(s) 716, 931
BsaWI WCCGGW 2 cut(s) 562, 873
Bsc4I CCNNNNNNNGG 2 cut(s) 455, 809
Bse1I ACTGG 2 cut(s) 33, 1037
Bse3DI GCAATG 1 cut(s) 803
BseBI CCWGG 3 cut(s) 456, 932, 1065
BseDI CCNNGG 2 cut(s) 716, 931
BseGI GGATG 3 cut(s) 175, 335, 903
BseLI CCNNNNNNNGG 2 cut(s) 455, 809
BseMI GCAATG 1 cut(s) 803
BseNI ACTGG 2 cut(s) 33, 1037
BsgI GTGCAG 1 cut(s) 688
BshFI GGCC 2 cut(s) 334, 1068
BsiSI CCGG 2 cut(s) 563, 874
BslI CCNNNNNNNGG 2 cut(s) 455, 809
BsnI GGCC 2 cut(s) 334, 1068
Bsp1407I TGTACA 1 cut(s) 792
Bsp143I GATC 3 cut(s) 476, 535, 936
Bsp19I CCATGG 1 cut(s) 716
BspACI CCGC 4 cut(s) 137, 780, 1103, 1127
BspANI GGCC 2 cut(s) 334, 1068
BspHI TCATGA 1 cut(s) 193
BspLI GGNNCC 2 cut(s) 447, 646
BspPI GGATC 3 cut(s) 471, 530, 944
BsrDI GCAATG 1 cut(s) 803
BsrGI TGTACA 1 cut(s) 792
BsrI ACTGG 2 cut(s) 33, 1037
BssECI CCNNGG 2 cut(s) 716, 931
BssMI GATC 3 cut(s) 476, 535, 936
BssNAI GTATAC 1 cut(s) 859
BssT1I CCWWGG 1 cut(s) 716
Bst1107I GTATAC 1 cut(s) 859
Bst2UI CCWGG 3 cut(s) 456, 932, 1065
BstAPI GCANNNNNTGC 1 cut(s) 805
BstAUI TGTACA 1 cut(s) 792
BstBAI YACGTR 1 cut(s) 106
BstC8I GCNNGC 2 cut(s) 264, 979
BstDEI CTNAG 2 cut(s) 318, 377
BstDSI CCRYGG 1 cut(s) 716
BstEII GGTNACC 1 cut(s) 392
BstF5I GGATG 3 cut(s) 175, 335, 903
BstHHI GCGC 1 cut(s) 237
BstKTI GATC 3 cut(s) 479, 538, 939
BstMBI GATC 3 cut(s) 476, 535, 936
BstMWI GCNNNNNNNGC 2 cut(s) 263, 805
BstNI CCWGG 3 cut(s) 456, 932, 1065
BstNSI RCATGY 2 cut(s) 525, 799
BstPI GGTNACC 1 cut(s) 392
BstSCI CCNGG 3 cut(s) 454, 930, 1063
BstX2I RGATCY 2 cut(s) 476, 936
BstYI RGATCY 2 cut(s) 476, 936
BstZ17I GTATAC 1 cut(s) 859
BsuRI GGCC 2 cut(s) 334, 1068
BtgI CCRYGG 1 cut(s) 716
BtgZI GCGATG 1 cut(s) 611
BtsCI GGATG 3 cut(s) 175, 335, 903
BtsI GCAGTG 1 cut(s) 306
BtsIMutI CAGTG 4 cut(s) 26, 306, 1104, 1136
Cac8I GCNNGC 2 cut(s) 264, 979
CaiI CAGNNNCTG 1 cut(s) 119
CciI TCATGA 1 cut(s) 193
CfoI GCGC 1 cut(s) 237
Cfr13I GGNCC 1 cut(s) 771
CseI GACGC 1 cut(s) 390
Csp6I GTAC 3 cut(s) 527, 793, 907
CviQI GTAC 3 cut(s) 527, 793, 907
DdeI CTNAG 2 cut(s) 318, 377
DpnI GATC 3 cut(s) 478, 537, 938
DpnII GATC 3 cut(s) 476, 535, 936
DrdI GACNNNNNNGTC 1 cut(s) 878
DseDI GACNNNNNNGTC 1 cut(s) 878
EaeI YGGCCR 1 cut(s) 332
Eco130I CCWWGG 1 cut(s) 716
Eco47I GGWCC 1 cut(s) 771
Eco57I CTGAAG 1 cut(s) 291
Eco72I CACGTG 1 cut(s) 106
Eco91I GGTNACC 1 cut(s) 392
EcoO65I GGTNACC 1 cut(s) 392
EcoRII CCWGG 3 cut(s) 454, 930, 1063
EcoT14I CCWWGG 1 cut(s) 716
EcoT22I ATGCAT 1 cut(s) 1028
ErhI CCWWGG 1 cut(s) 716
FalI AAGNNNNNCTT 2 cut(s) 65, 97
FauI CCCGC 1 cut(s) 130
FblI GTMKAC 1 cut(s) 858
Fnu4HI GCNGC 1 cut(s) 1103
FokI GGATG 3 cut(s) 182, 342, 910
Fsp4HI GCNGC 1 cut(s) 1103
FspBI CTAG 1 cut(s) 149
GlaI GCGC 1 cut(s) 236
GluI GCNGC 1 cut(s) 1103
GsuI CTGGAG 1 cut(s) 110
HaeIII GGCC 2 cut(s) 334, 1068
HapII CCGG 2 cut(s) 563, 874
HgaI GACGC 1 cut(s) 390
HhaI GCGC 1 cut(s) 237
Hin6I GCGC 1 cut(s) 235
HinP1I GCGC 1 cut(s) 235
HincII GTYRAC 4 cut(s) 111, 202, 568, 1134
HindII GTYRAC 4 cut(s) 111, 202, 568, 1134
HinfI GANTC 2 cut(s) 155, 559
HpaII CCGG 2 cut(s) 563, 874
HphI GGTGA 3 cut(s) 140, 778, 901
Hpy166II GTNNAC 8 cut(s) 103, 111, 202, 351, 527, 568, 859, 1134
Hpy188I TCNGA 7 cut(s) 271, 426, 476, 676, 698, 851, 958
Hpy188III TCNNGA 2 cut(s) 89, 194
Hpy8I GTNNAC 8 cut(s) 103, 111, 202, 351, 527, 568, 859, 1134
HpyAV CCTTC 4 cut(s) 289, 461, 729, 963
HpyCH4IV ACGT 5 cut(s) 14, 21, 41, 105, 415
HpyCH4V TGCA 9 cut(s) 26, 71, 311, 705, 799, 808, 998, 1026, 1073
HpyF10VI GCNNNNNNNGC 2 cut(s) 263, 805
HpyF3I CTNAG 2 cut(s) 318, 377
HpySE526I ACGT 5 cut(s) 14, 21, 41, 105, 415
HspAI GCGC 1 cut(s) 235
Kzo9I GATC 3 cut(s) 476, 535, 936
LmnI GCTCC 2 cut(s) 232, 445
LweI GCATC 2 cut(s) 985, 1121
MaeI CTAG 1 cut(s) 149
MaeII ACGT 5 cut(s) 14, 21, 41, 105, 415
MaeIII GTNAC 2 cut(s) 392, 547
MalI GATC 3 cut(s) 478, 537, 938
MboI GATC 3 cut(s) 476, 535, 936
MboII GAAGA 5 cut(s) 153, 235, 284, 971, 1049
MflI RGATCY 2 cut(s) 476, 936
MlsI TGGCCA 1 cut(s) 334
MluNI TGGCCA 1 cut(s) 334
MlyI GAGTC 1 cut(s) 149
MmeI TCCRAC 2 cut(s) 443, 622
MnlI CCTC 5 cut(s) 126, 145, 383, 658, 762
Mox20I TGGCCA 1 cut(s) 334
Mph1103I ATGCAT 1 cut(s) 1028
MscI TGGCCA 1 cut(s) 334
MseI TTAA 7 cut(s) 83, 242, 666, 758, 815, 864, 1008
Msp20I TGGCCA 1 cut(s) 334
MspI CCGG 2 cut(s) 563, 874
MspR9I CCNGG 3 cut(s) 456, 932, 1065
MvaI CCWGG 3 cut(s) 456, 932, 1065
MwoI GCNNNNNNNGC 2 cut(s) 263, 805
NcoI CCATGG 1 cut(s) 716
NdeII GATC 3 cut(s) 476, 535, 936
NlaIV GGNNCC 2 cut(s) 447, 646
NsiI ATGCAT 1 cut(s) 1028
NspI RCATGY 2 cut(s) 525, 799
PagI TCATGA 1 cut(s) 193
PciI ACATGT 1 cut(s) 521
PfeI GAWTC 1 cut(s) 559
PkrI GCNGC 1 cut(s) 1104
PleI GAGTC 1 cut(s) 149
PmaCI CACGTG 1 cut(s) 106
PmlI CACGTG 1 cut(s) 106
PpsI GAGTC 1 cut(s) 149
Ppu21I YACGTR 1 cut(s) 106
PscI ACATGT 1 cut(s) 521
Psp6I CCWGG 3 cut(s) 454, 930, 1063
PspCI CACGTG 1 cut(s) 106
PspEI GGTNACC 1 cut(s) 392
PspGI CCWGG 3 cut(s) 454, 930, 1063
PspN4I GGNNCC 2 cut(s) 447, 646
PspPI GGNCC 1 cut(s) 771
PstNI CAGNNNCTG 1 cut(s) 119
PsuI RGATCY 2 cut(s) 476, 936
RsaI GTAC 3 cut(s) 528, 794, 908
RsaNI GTAC 3 cut(s) 527, 793, 907
SaqAI TTAA 7 cut(s) 83, 242, 666, 758, 815, 864, 1008
SatI GCNGC 1 cut(s) 1103
Sau3AI GATC 3 cut(s) 476, 535, 936
Sau96I GGNCC 1 cut(s) 771
ScaI AGTACT 1 cut(s) 908
SchI GAGTC 1 cut(s) 149
ScrFI CCNGG 3 cut(s) 456, 932, 1065
SfaNI GCATC 2 cut(s) 985, 1121
SinI GGWCC 1 cut(s) 771
SmlI CTYRAG 1 cut(s) 385
SmoI CTYRAG 1 cut(s) 385
SsiI CCGC 4 cut(s) 137, 780, 1103, 1127
SspI AATATT 1 cut(s) 845
SspMI CTAG 1 cut(s) 149
StyD4I CCNGG 3 cut(s) 454, 930, 1063
StyI CCWWGG 1 cut(s) 716
TaiI ACGT 5 cut(s) 17, 24, 44, 108, 418
TaqI TCGA 1 cut(s) 534
TatI WGTACW 2 cut(s) 792, 906
TauI GCSGC 1 cut(s) 1105
TfiI GAWTC 1 cut(s) 559
Tru1I TTAA 7 cut(s) 83, 242, 666, 758, 815, 864, 1008
Tru9I TTAA 7 cut(s) 83, 242, 666, 758, 815, 864, 1008
TscAI CASTG 4 cut(s) 33, 313, 1104, 1143
TspDTI ATGAA 2 cut(s) 231, 308
TspGWI ACGGA 1 cut(s) 910
TspRI CASTG 4 cut(s) 33, 313, 1104, 1143
VpaK11BI GGWCC 1 cut(s) 771
XapI RAATTY 5 cut(s) 580, 668, 686, 833, 1003
XceI RCATGY 2 cut(s) 525, 799
XcmI CCANNNNNNNNNTGG 1 cut(s) 456
XmiI GTMKAC 1 cut(s) 858
XspI CTAG 1 cut(s) 149
ZrmI AGTACT 1 cut(s) 908
Zsp2I ATGCAT 1 cut(s) 1028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.