Rorug05G0396000

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
54334393 .. 54334942
550 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0396000.1

Sequence Viewer

Length: 492 bp
ATGGCTGGGGTTGTGAATGATTCGGTGGAAACTTTGAGTCAGACGGACTCGTCGTTGGTGACTCTCGGGGATGCAGGGGCCGCGGCGTTCCAGGACAATCATTGGTACATGGTTGGCCGACTATTGGCGCCGAAGGCAAGGCTTCCAGGTTTGTCATACTCCCTCTTGAAGGGTACAATTTCTACTATCTGGCATATCAGATCAAGCCTGACCATTCAAGATGCAGGGGACCCTGGTTCTATCGTAACACGATGCTTTGTGGTGGGTGAATATGACGGGTTTGCTCCGCCAGAGACGGTGGCTCTGGATTTGATGGAGACTTGGGTCGCGGTGAGGGGTCTTCCTCTTGCTCTGAGGAATAAGACGGCGCTCACTATGGTGGGCACGACTCTAGGGCATGTGGTTCGAATGGATTTGACTGCCCTGAAAAGAAAAGAAGAAGAGCAGCGGATCAAGATCGTGTTTGATGTGAGGCGGCAGATTCGTACCTAG

Protein Analysis

163

Amino Acids

17.85

Weight (kDa)

7.91

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 49
AccB1I GGYRCC 1 cut(s) 127
AccII CGCG 2 cut(s) 83, 329
AciI CCGC 6 cut(s) 81, 83, 287, 329, 448, 475
AclWI GGATC 1 cut(s) 458
AcoI YGGCCR 1 cut(s) 115
AcyI GRCGYC 1 cut(s) 128
AfaI GTAC 3 cut(s) 107, 175, 487
AfiI CCNNNNNNNGG 2 cut(s) 124, 169
AgsI TTSAA 2 cut(s) 169, 218
AjnI CCWGG 3 cut(s) 90, 145, 232
AleI CACNNNNGTG 1 cut(s) 377
Alw26I GTCTC 2 cut(s) 287, 311
AlwI GGATC 1 cut(s) 458
Ama87I CYCGRG 1 cut(s) 65
AoxI GGCC 2 cut(s) 78, 115
ApeKI GCWGC 1 cut(s) 445
AspLEI GCGC 2 cut(s) 130, 370
AspS9I GGNCC 2 cut(s) 78, 229
AsuHPI GGTGA 3 cut(s) 70, 278, 343
AsuII TTCGAA 1 cut(s) 406
AvaI CYCGRG 1 cut(s) 65
AvaII GGWCC 1 cut(s) 229
BaeGI GKGCMC 1 cut(s) 386
BanI GGYRCC 1 cut(s) 127
BbsI GAAGAC 1 cut(s) 332
BbvI GCAGC 1 cut(s) 457
BccI CCATC 1 cut(s) 307
BceAI ACGGC 1 cut(s) 381
BcgI CGANNNNNNTGC 2 cut(s) 386, 420
BciT130I CCWGG 3 cut(s) 92, 147, 234
BcoDI GTCTC 2 cut(s) 287, 311
BfaI CTAG 2 cut(s) 392, 490
BfoI RGCGCY 2 cut(s) 131, 371
BisI GCNGC 4 cut(s) 81, 84, 446, 476
BlsI GCNGC 4 cut(s) 82, 85, 447, 477
Bme1390I CCNGG 3 cut(s) 92, 147, 234
Bme18I GGWCC 1 cut(s) 229
BmeT110I CYCGRG 1 cut(s) 65
BmgT120I GGNCC 2 cut(s) 78, 229
BmiI GGNNCC 4 cut(s) 79, 129, 230, 231
BmrFI CCNGG 3 cut(s) 92, 147, 234
BmsI GCATC 3 cut(s) 61, 211, 242
BoxI GACNNNNGTC 1 cut(s) 323
BpiI GAAGAC 1 cut(s) 332
Bpu14I TTCGAA 1 cut(s) 406
BsaBI GATNNNNATC 1 cut(s) 455
BsaHI GRCGYC 1 cut(s) 128
BsaJI CCNNGG 2 cut(s) 81, 232
Bsc4I CCNNNNNNNGG 2 cut(s) 124, 169
Bse8I GATNNNNATC 1 cut(s) 455
BseBI CCWGG 3 cut(s) 92, 147, 234
BseDI CCNNGG 2 cut(s) 81, 232
BseGI GGATG 1 cut(s) 76
BseJI GATNNNNATC 1 cut(s) 455
BseLI CCNNNNNNNGG 2 cut(s) 124, 169
BseMII CTCAG 1 cut(s) 344
BseSI GKGCMC 1 cut(s) 386
BseXI GCAGC 1 cut(s) 457
BseYI CCCAGC 1 cut(s) 5
Bsh1236I CGCG 2 cut(s) 83, 329
BshFI GGCC 2 cut(s) 80, 117
BshNI GGYRCC 1 cut(s) 127
BsiHKCI CYCGRG 1 cut(s) 65
BslFI GGGAC 1 cut(s) 242
BslI CCNNNNNNNGG 2 cut(s) 124, 169
BsmAI GTCTC 2 cut(s) 287, 311
BsmBI CGTCTC 1 cut(s) 287
BsmFI GGGAC 1 cut(s) 242
BsnI GGCC 2 cut(s) 80, 117
BsoBI CYCGRG 1 cut(s) 65
Bsp119I TTCGAA 1 cut(s) 406
Bsp1286I GDGCHC 1 cut(s) 386
Bsp143I GATC 3 cut(s) 200, 450, 456
BspACI CCGC 6 cut(s) 81, 83, 287, 329, 448, 475
BspANI GGCC 2 cut(s) 80, 117
BspCNI CTCAG 1 cut(s) 345
BspFNI CGCG 2 cut(s) 83, 329
BspLI GGNNCC 4 cut(s) 79, 129, 230, 231
BspPI GGATC 1 cut(s) 458
BspQI GCTCTTC 1 cut(s) 435
BspT104I TTCGAA 1 cut(s) 406
BspT107I GGYRCC 1 cut(s) 127
BssECI CCNNGG 2 cut(s) 81, 232
BssMI GATC 3 cut(s) 200, 450, 456
BssNI GRCGYC 1 cut(s) 128
Bst2UI CCWGG 3 cut(s) 92, 147, 234
Bst4CI ACNGT 1 cut(s) 298
Bst6I CTCTTC 1 cut(s) 435
BstACI GRCGYC 1 cut(s) 128
BstBI TTCGAA 1 cut(s) 406
BstDEI CTNAG 1 cut(s) 353
BstDSI CCRYGG 1 cut(s) 81
BstENI CCTNNNNNAGG 1 cut(s) 167
BstF5I GGATG 1 cut(s) 76
BstFNI CGCG 2 cut(s) 83, 329
BstH2I RGCGCY 2 cut(s) 131, 371
BstHHI GCGC 2 cut(s) 130, 370
BstKTI GATC 3 cut(s) 203, 453, 459
BstMAI GTCTC 2 cut(s) 287, 311
BstMBI GATC 3 cut(s) 200, 450, 456
BstMWI GCNNNNNNNGC 2 cut(s) 80, 134
BstNI CCWGG 3 cut(s) 92, 147, 234
BstNSI RCATGY 1 cut(s) 401
BstPAI GACNNNNGTC 1 cut(s) 323
BstSCI CCNGG 3 cut(s) 90, 145, 232
BstSLI GKGCMC 1 cut(s) 386
BstUI CGCG 2 cut(s) 83, 329
BstV1I GCAGC 1 cut(s) 457
BstV2I GAAGAC 1 cut(s) 332
BsuRI GGCC 2 cut(s) 80, 117
BtgI CCRYGG 1 cut(s) 81
BtsCI GGATG 1 cut(s) 76
CfoI GCGC 2 cut(s) 130, 370
Cfr13I GGNCC 2 cut(s) 78, 229
Cfr42I CCGCGG 1 cut(s) 84
Csp6I GTAC 3 cut(s) 106, 174, 486
CviAII CATG 2 cut(s) 109, 398
CviJI RGCY 6 cut(s) 5, 80, 117, 142, 207, 302
CviKI_1 RGCY 6 cut(s) 5, 80, 117, 142, 207, 302
CviQI GTAC 3 cut(s) 106, 174, 486
DdeI CTNAG 1 cut(s) 353
DinI GGCGCC 1 cut(s) 129
DpnI GATC 3 cut(s) 202, 452, 458
DpnII GATC 3 cut(s) 200, 450, 456
DrdI GACNNNNNNGTC 1 cut(s) 49
DseDI GACNNNNNNGTC 1 cut(s) 49
EaeI YGGCCR 1 cut(s) 115
Eam1104I CTCTTC 1 cut(s) 435
EarI CTCTTC 1 cut(s) 435
EciI GGCGGA 1 cut(s) 276
Eco47I GGWCC 1 cut(s) 229
Eco88I CYCGRG 1 cut(s) 65
EcoNI CCTNNNNNAGG 1 cut(s) 167
EcoO109I RGGNCCY 1 cut(s) 229
EcoRII CCWGG 3 cut(s) 90, 145, 232
EgeI GGCGCC 1 cut(s) 129
EheI GGCGCC 1 cut(s) 129
Esp3I CGTCTC 1 cut(s) 287
FaeI CATG 2 cut(s) 112, 401
FaiI YATR 6 cut(s) 110, 157, 195, 273, 377, 399
FaqI GGGAC 1 cut(s) 242
FatI CATG 2 cut(s) 108, 397
Fnu4HI GCNGC 4 cut(s) 81, 84, 446, 476
FokI GGATG 1 cut(s) 83
Fsp4HI GCNGC 4 cut(s) 81, 84, 446, 476
FspBI CTAG 2 cut(s) 392, 490
GlaI GCGC 2 cut(s) 129, 369
GluI GCNGC 4 cut(s) 81, 84, 446, 476
GsaI CCCAGC 1 cut(s) 9
HaeII RGCGCY 2 cut(s) 131, 371
HaeIII GGCC 2 cut(s) 80, 117
HhaI GCGC 2 cut(s) 130, 370
Hin1I GRCGYC 1 cut(s) 128
Hin1II CATG 2 cut(s) 112, 401
Hin6I GCGC 2 cut(s) 128, 368
HinP1I GCGC 2 cut(s) 128, 368
HinfI GANTC 6 cut(s) 20, 37, 47, 61, 388, 481
HphI GGTGA 3 cut(s) 70, 278, 343
Hpy188I TCNGA 3 cut(s) 42, 200, 354
Hpy188III TCNNGA 4 cut(s) 166, 218, 305, 454
Hpy99I CGWCG 1 cut(s) 55
HpyAV CCTTC 2 cut(s) 127, 163
HpyCH4III ACNGT 1 cut(s) 298
HpyCH4V TGCA 2 cut(s) 74, 224
HpyF10VI GCNNNNNNNGC 2 cut(s) 80, 134
HpyF3I CTNAG 1 cut(s) 353
Hsp92I GRCGYC 1 cut(s) 128
Hsp92II CATG 2 cut(s) 112, 401
HspAI GCGC 2 cut(s) 128, 368
KasI GGCGCC 1 cut(s) 127
KflI GGGWCCC 1 cut(s) 229
KspI CCGCGG 1 cut(s) 84
Kzo9I GATC 3 cut(s) 200, 450, 456
LguI GCTCTTC 1 cut(s) 435
LmnI GCTCC 1 cut(s) 289
Lsp1109I GCAGC 1 cut(s) 457
LweI GCATC 3 cut(s) 61, 211, 242
MaeI CTAG 2 cut(s) 392, 490
MaeIII GTNAC 2 cut(s) 58, 244
MalI GATC 3 cut(s) 202, 452, 458
MboI GATC 3 cut(s) 200, 450, 456
MboII GAAGA 3 cut(s) 332, 449, 452
MhlI GDGCHC 1 cut(s) 386
MluCI AATT 1 cut(s) 177
Mly113I GGCGCC 1 cut(s) 128
MlyI GAGTC 4 cut(s) 41, 46, 55, 382
MnlI CCTC 5 cut(s) 173, 327, 348, 354, 465
MslI CAYNNNNRTG 1 cut(s) 377
MspA1I CMGCKG 2 cut(s) 83, 448
MspR9I CCNGG 3 cut(s) 92, 147, 234
MvaI CCWGG 3 cut(s) 92, 147, 234
MvnI CGCG 2 cut(s) 83, 329
MwoI GCNNNNNNNGC 2 cut(s) 80, 134
NarI GGCGCC 1 cut(s) 128
NdeII GATC 3 cut(s) 200, 450, 456
NlaIII CATG 2 cut(s) 112, 401
NlaIV GGNNCC 4 cut(s) 79, 129, 230, 231
NmuCI GTSAC 1 cut(s) 58
NspI RCATGY 1 cut(s) 401
NspV TTCGAA 1 cut(s) 406
OliI CACNNNNGTG 1 cut(s) 377
PciSI GCTCTTC 1 cut(s) 435
PcsI WCGNNNNNNNCGW 1 cut(s) 50
PfeI GAWTC 2 cut(s) 20, 481
PfoI TCCNGGA 1 cut(s) 90
PkrI GCNGC 4 cut(s) 82, 85, 447, 477
PleI GAGTC 4 cut(s) 41, 45, 55, 382
PluTI GGCGCC 1 cut(s) 131
PpsI GAGTC 4 cut(s) 41, 45, 55, 382
PpuMI RGGWCCY 1 cut(s) 229
PshAI GACNNNNGTC 1 cut(s) 323
Psp5II RGGWCCY 1 cut(s) 229
Psp6I CCWGG 3 cut(s) 90, 145, 232
PspFI CCCAGC 1 cut(s) 5
PspGI CCWGG 3 cut(s) 90, 145, 232
PspN4I GGNNCC 4 cut(s) 79, 129, 230, 231
PspPI GGNCC 2 cut(s) 78, 229
PspPPI RGGWCCY 1 cut(s) 229
RsaI GTAC 3 cut(s) 107, 175, 487
RsaNI GTAC 3 cut(s) 106, 174, 486
RseI CAYNNNNRTG 1 cut(s) 377
SacII CCGCGG 1 cut(s) 84
SapI GCTCTTC 1 cut(s) 435
SatI GCNGC 4 cut(s) 81, 84, 446, 476
Sau3AI GATC 3 cut(s) 200, 450, 456
Sau96I GGNCC 2 cut(s) 78, 229
SchI GAGTC 4 cut(s) 41, 46, 55, 382
ScrFI CCNGG 3 cut(s) 92, 147, 234
SduI GDGCHC 1 cut(s) 386
SetI ASST 2 cut(s) 151, 491
SfaNI GCATC 3 cut(s) 61, 211, 242
SfoI GGCGCC 1 cut(s) 129
Sfr303I CCGCGG 1 cut(s) 84
SfuI TTCGAA 1 cut(s) 406
SgrBI CCGCGG 1 cut(s) 84
SinI GGWCC 1 cut(s) 229
SmiMI CAYNNNNRTG 1 cut(s) 377
Sse9I AATT 1 cut(s) 177
SsiI CCGC 6 cut(s) 81, 83, 287, 329, 448, 475
SspDI GGCGCC 1 cut(s) 127
SspMI CTAG 2 cut(s) 392, 490
StyD4I CCNGG 3 cut(s) 90, 145, 232
TaaI ACNGT 1 cut(s) 298
TaqI TCGA 1 cut(s) 406
TasI AATT 1 cut(s) 177
TauI GCSGC 3 cut(s) 83, 86, 478
TfiI GAWTC 2 cut(s) 20, 481
TseFI GTSAC 1 cut(s) 58
TseI GCWGC 1 cut(s) 445
Tsp45I GTSAC 1 cut(s) 58
TspGWI ACGGA 1 cut(s) 59
VpaK11BI GGWCC 1 cut(s) 229
XagI CCTNNNNNAGG 1 cut(s) 167
XceI RCATGY 1 cut(s) 401
XspI CTAG 2 cut(s) 392, 490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.