Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003076.1

Orthogroup ID

OG0000227

Physical Location & Seq

Genomic Coordinates Reverse (-)

118193 .. 125629

Gene Structure 7437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003076.1_g000025.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1272 bp

atgctttgtcctctttaccctaaggccgcgttcgccgtctggtgcaaaattggtctcgtccagtggcgctcgggcgtagggggtggcctccggcctcaccgtcgtcttggtgagtgctgtcggatgggaaatcgatcgatagctattgcccttgggactctgtcgaagaaggctgaggtggtaggttgtgtcgttacaagctggttgtcaatcctcgtggaggccgacgatgtacttgagacggttggatcactgccatggtggtgtaatcatgacgaggcgggttggcggcagggatcagaccaaactcggccgggaagtgacgcacgacgagggtatgacgttgcactggaagtgaatacatttggagttttgaatgtgttagactttgcaaagaaatgcttcaatctggagatggttgttcacgtgtcaacagcttatgtgtctggtgatagggcggggctgatactagaggactcatcttcaatggatgagatggcaagacaaactactcatgatgttgacttgaaagaacatgaaaagaagatggtggagcgcaaattaaaagaactacaagcacagcacgcttctgaagaagttattacaaatacaatgaaagactttggcactgcaagatcctatgatagcctaattggtagttattggaaagggaagctcacatgtgtacctgtcgatcctatgtcagtaacagatatgattccggttgacatggtggtaaattcaattattacagcaatggtagtcaatgcaaataaatctcgtgaaattatttaccatgttggaacctcattacgaaatccccttaaattctctgattttcacaaatttatgttccgatactgcacaaaaaatccatggctttacaatgatggaaggcttatcaaggttggcaagttaaaaatggtgaggaccatgaccgcttttcgcttgtacatgcaaccattgcagggattaaaatttttgaataaagaatttgaccaatatttccaagatgtatgcattaactatgaccggaatgtcaaatcggtgatgcggatgattgagtactatataccacttttgctattccaggggatctttgacgacaccaattctgaagaattgcgaaggacagcaagcgagaactacattgatgcagaaaattttaatttcaacccaaaatgcattgactgggaagactattatatccatgctcacattcctggccttgcaaagcatgttattttcaaacacaaccaaagccggctttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006139 GO:0006163 GO:0006637 GO:0006725 GO:0006732 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009259 GO:0009507 GO:0009536 GO:0009611 GO:0009628 GO:0009651 GO:0009698 GO:0009699 GO:0009987 GO:0010345 GO:0016020 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019637 GO:0019693 GO:0019748 GO:0033865 GO:0033875 GO:0034032 GO:0034641 GO:0035336 GO:0035337 GO:0035383 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046483 GO:0050062 GO:0050896 GO:0051186 GO:0055086 GO:0055114 GO:0071704 GO:0071944 GO:0072521 GO:0080019 GO:1901135 GO:1901360 GO:1901362 GO:1901564 GO:1901568 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00073 ko04146 ko04212 map00073 map04146 map04212

Pfam Domains

Protein Families

NAD_binding_4 Sterile

Protein Analysis

423

Amino Acids

48.42

Weight (kDa)

7.94

Isoelectric Point (pI)

36.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000227)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca	FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica	MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica	Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis	pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis	RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata	RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora	Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii	Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa	Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha	Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana	Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1037
AccII	CGCG	1 cut(s)	29
AciI	CCGC	6 cut(s)	27, 281, 289, 458, 939, 1054
AclWI	GGATC	5 cut(s)	256, 304, 630, 689, 1103
AcoI	YGGCCR	1 cut(s)	311
AcsI	RAATTY	6 cut(s)	739, 827, 845, 977, 992, 1162
AcuI	CTGAAG	2 cut(s)	612, 1137
AcvI	CACGTG	1 cut(s)	427
AfaI	GTAC	4 cut(s)	234, 687, 953, 1067
AfiI	CCNNNNNNNGG	2 cut(s)	220, 968
AflIII	ACRYGT	2 cut(s)	426, 680
AgsI	TTSAA	8 cut(s)	376, 406, 486, 529, 744, 985, 1174, 1249
AjnI	CCWGG	2 cut(s)	1089, 1222
AluBI	AGCT	4 cut(s)	143, 201, 437, 676
AluI	AGCT	4 cut(s)	143, 201, 437, 676
Alw26I	GTCTC	2 cut(s)	59, 233
AlwI	GGATC	5 cut(s)	256, 304, 630, 689, 1103
Ama87I	CYCGRG	1 cut(s)	70
AoxI	GGCC	6 cut(s)	24, 85, 92, 222, 311, 1225
ApoI	RAATTY	6 cut(s)	739, 827, 845, 977, 992, 1162
Asp700I	GAANNNNTTC	1 cut(s)	401
AspLEI	GCGC	2 cut(s)	69, 558
AspS9I	GGNCC	1 cut(s)	930
AsuC2I	CCSGG	1 cut(s)	315
AsuHPI	GGTGA	5 cut(s)	89, 122, 461, 937, 1060
AvaI	CYCGRG	1 cut(s)	70
AvaII	GGWCC	1 cut(s)	930
AxyI	CCTNAGG	1 cut(s)	21
BaeI	ACNNNNGTAYC	2 cut(s)	669, 702
BauI	CACGAG	2 cut(s)	215, 780
BbrPI	CACGTG	1 cut(s)	427
BbsI	GAAGAC	1 cut(s)	1203
BbvCI	CCTCAGC	1 cut(s)	174
BccI	CCATC	5 cut(s)	118, 409, 490, 541, 884
BceAI	ACGGC	1 cut(s)	20
BciT130I	CCWGG	2 cut(s)	1091, 1224
BcnI	CCSGG	1 cut(s)	315
BcoDI	GTCTC	2 cut(s)	59, 233
BfaI	CTAG	1 cut(s)	470
BfoI	RGCGCY	1 cut(s)	70
BisI	GCNGC	2 cut(s)	27, 290
BlsI	GCNGC	2 cut(s)	28, 291
BmcAI	AGTACT	1 cut(s)	1067
Bme1390I	CCNGG	3 cut(s)	315, 1091, 1224
Bme18I	GGWCC	1 cut(s)	930
BmeT110I	CYCGRG	1 cut(s)	70
BmgT120I	GGNCC	1 cut(s)	930
BmiI	GGNNCC	1 cut(s)	805
BmrFI	CCNGG	3 cut(s)	315, 1091, 1224
BmrI	ACTGGG	1 cut(s)	1201
BmsI	GCATC	2 cut(s)	1041, 1144
BmuI	ACTGGG	1 cut(s)	1201
BpiI	GAAGAC	1 cut(s)	1203
BpmI	CTGGAG	1 cut(s)	431
Bpu10I	CCTNAGC	1 cut(s)	174
BpuEI	CTTGAG	1 cut(s)	257
BpuMI	CCSGG	1 cut(s)	315
Bsa29I	ATCGAT	2 cut(s)	133, 137
BsaAI	YACGTR	1 cut(s)	427
BsaI	GGTCTC	1 cut(s)	59
BsaJI	CCNNGG	4 cut(s)	151, 257, 875, 1090
BsaWI	WCCGGW	2 cut(s)	721, 1032
Bsc4I	CCNNNNNNNGG	2 cut(s)	220, 968
Bse118I	RCCGGY	1 cut(s)	1263
Bse1I	ACTGG	3 cut(s)	61, 354, 1196
Bse21I	CCTNAGG	1 cut(s)	21
Bse3DI	GCAATG	2 cut(s)	762, 962
BseBI	CCWGG	2 cut(s)	1091, 1224
BseCI	ATCGAT	2 cut(s)	133, 137
BseDI	CCNNGG	4 cut(s)	151, 257, 875, 1090
BseGI	GGATG	3 cut(s)	129, 496, 1062
BseLI	CCNNNNNNNGG	2 cut(s)	220, 968
BseMI	GCAATG	2 cut(s)	762, 962
BseMII	CTCAG	1 cut(s)	165
BseNI	ACTGG	3 cut(s)	61, 354, 1196
BseX3I	CGGCCG	1 cut(s)	311
BsgI	GTGCAG	1 cut(s)	847
Bsh1236I	CGCG	1 cut(s)	29
Bsh1285I	CGRYCG	2 cut(s)	137, 314
BshFI	GGCC	6 cut(s)	26, 87, 94, 224, 313, 1227
BshVI	ATCGAT	2 cut(s)	133, 137
BsiEI	CGRYCG	2 cut(s)	137, 314
BsiHKCI	CYCGRG	1 cut(s)	70
BsiSI	CCGG	5 cut(s)	91, 314, 722, 1033, 1264
BslFI	GGGAC	1 cut(s)	169
BslI	CCNNNNNNNGG	2 cut(s)	220, 968
BsmAI	GTCTC	2 cut(s)	59, 233
BsmBI	CGTCTC	1 cut(s)	233
BsmFI	GGGAC	1 cut(s)	169
BsnI	GGCC	6 cut(s)	26, 87, 94, 224, 313, 1227
Bso31I	GGTCTC	1 cut(s)	59
BsoBI	CYCGRG	1 cut(s)	70
Bsp1407I	TGTACA	1 cut(s)	951
Bsp143I	GATC	6 cut(s)	134, 248, 296, 635, 694, 1095
Bsp19I	CCATGG	2 cut(s)	257, 875
BspACI	CCGC	6 cut(s)	27, 281, 289, 458, 939, 1054
BspANI	GGCC	6 cut(s)	26, 87, 94, 224, 313, 1227
BspCNI	CTCAG	1 cut(s)	166
BspDI	ATCGAT	2 cut(s)	133, 137
BspFNI	CGCG	1 cut(s)	29
BspHI	TCATGA	2 cut(s)	271, 514
BspLI	GGNNCC	1 cut(s)	805
BspPI	GGATC	5 cut(s)	256, 304, 630, 689, 1103
BspTNI	GGTCTC	1 cut(s)	59
BsrDI	GCAATG	2 cut(s)	762, 962
BsrFI	RCCGGY	1 cut(s)	1263
BsrGI	TGTACA	1 cut(s)	951
BsrI	ACTGG	3 cut(s)	61, 354, 1196
BssAI	RCCGGY	1 cut(s)	1263
BssECI	CCNNGG	4 cut(s)	151, 257, 875, 1090
BssMI	GATC	6 cut(s)	134, 248, 296, 635, 694, 1095
BssSI	CACGAG	2 cut(s)	215, 780
BssT1I	CCWWGG	3 cut(s)	151, 257, 875
Bst2BI	CACGAG	2 cut(s)	215, 780
Bst2UI	CCWGG	2 cut(s)	1091, 1224
Bst4CI	ACNGT	2 cut(s)	101, 244
BstAPI	GCANNNNNTGC	1 cut(s)	964
BstAUI	TGTACA	1 cut(s)	951
BstBAI	YACGTR	1 cut(s)	427
BstC8I	GCNNGC	3 cut(s)	585, 1138, 1265
BstDEI	CTNAG	2 cut(s)	21, 174
BstDSI	CCRYGG	2 cut(s)	257, 875
BstENI	CCTNNNNNAGG	1 cut(s)	218
BstF5I	GGATG	3 cut(s)	129, 496, 1062
BstFNI	CGCG	1 cut(s)	29
BstH2I	RGCGCY	1 cut(s)	70
BstHHI	GCGC	2 cut(s)	69, 558
BstKTI	GATC	6 cut(s)	137, 251, 299, 638, 697, 1098
BstMAI	GTCTC	2 cut(s)	59, 233
BstMBI	GATC	6 cut(s)	134, 248, 296, 635, 694, 1095
BstMCI	CGRYCG	2 cut(s)	137, 314
BstMWI	GCNNNNNNNGC	3 cut(s)	32, 584, 964
BstNI	CCWGG	2 cut(s)	1091, 1224
BstNSI	RCATGY	3 cut(s)	684, 958, 1241
BstSCI	CCNGG	3 cut(s)	313, 1089, 1222
BstUI	CGCG	1 cut(s)	29
BstV2I	GAAGAC	1 cut(s)	1203
BstX2I	RGATCY	2 cut(s)	635, 1095
BstYI	RGATCY	2 cut(s)	635, 1095
BstZI	CGGCCG	1 cut(s)	311
Bsu15I	ATCGAT	2 cut(s)	133, 137
Bsu36I	CCTNAGG	1 cut(s)	21
BsuRI	GGCC	6 cut(s)	26, 87, 94, 224, 313, 1227
BsuTUI	ATCGAT	2 cut(s)	133, 137
BtgI	CCRYGG	2 cut(s)	257, 875
BtsCI	GGATG	3 cut(s)	129, 496, 1062
BtsI	GCAGTG	2 cut(s)	251, 627
BtsIMutI	CAGTG	4 cut(s)	68, 251, 347, 627
Cac8I	GCNNGC	3 cut(s)	585, 1138, 1265
CciI	TCATGA	2 cut(s)	271, 514
CfoI	GCGC	2 cut(s)	69, 558
Cfr10I	RCCGGY	1 cut(s)	1263
Cfr13I	GGNCC	1 cut(s)	930
ClaI	ATCGAT	2 cut(s)	133, 137
CseI	GACGC	1 cut(s)	332
Csp6I	GTAC	4 cut(s)	233, 686, 952, 1066
CspCI	CAANNNNNGTGG	2 cut(s)	198, 233
CviQI	GTAC	4 cut(s)	233, 686, 952, 1066
DdeI	CTNAG	2 cut(s)	21, 174
DpnI	GATC	6 cut(s)	136, 250, 298, 637, 696, 1097
DpnII	GATC	6 cut(s)	134, 248, 296, 635, 694, 1095
DrdI	GACNNNNNNGTC	1 cut(s)	1037
DseDI	GACNNNNNNGTC	1 cut(s)	1037
EaeI	YGGCCR	1 cut(s)	311
EagI	CGGCCG	1 cut(s)	311
EclXI	CGGCCG	1 cut(s)	311
Eco130I	CCWWGG	3 cut(s)	151, 257, 875
Eco31I	GGTCTC	1 cut(s)	59
Eco47I	GGWCC	1 cut(s)	930
Eco52I	CGGCCG	1 cut(s)	311
Eco57I	CTGAAG	2 cut(s)	612, 1137
Eco72I	CACGTG	1 cut(s)	427
Eco81I	CCTNAGG	1 cut(s)	21
Eco88I	CYCGRG	1 cut(s)	70
EcoNI	CCTNNNNNAGG	1 cut(s)	218
EcoRII	CCWGG	2 cut(s)	1089, 1222
EcoT14I	CCWWGG	3 cut(s)	151, 257, 875
EcoT22I	ATGCAT	2 cut(s)	1022, 1187
ErhI	CCWWGG	3 cut(s)	151, 257, 875
Esp3I	CGTCTC	1 cut(s)	233
FalI	AAGNNNNNCTT	2 cut(s)	386, 418
FaqI	GGGAC	1 cut(s)	169
FauI	CCCGC	2 cut(s)	274, 451
Fnu4HI	GCNGC	2 cut(s)	27, 290
FokI	GGATG	3 cut(s)	136, 503, 1069
Fsp4HI	GCNGC	2 cut(s)	27, 290
FspBI	CTAG	1 cut(s)	470
GlaI	GCGC	2 cut(s)	68, 557
GluI	GCNGC	2 cut(s)	27, 290
GsuI	CTGGAG	1 cut(s)	431
HaeII	RGCGCY	1 cut(s)	70
HaeIII	GGCC	6 cut(s)	26, 87, 94, 224, 313, 1227
HapII	CCGG	5 cut(s)	91, 314, 722, 1033, 1264
HgaI	GACGC	1 cut(s)	332
HhaI	GCGC	2 cut(s)	69, 558
Hin6I	GCGC	2 cut(s)	67, 556
HinP1I	GCGC	2 cut(s)	67, 556
HincII	GTYRAC	3 cut(s)	432, 523, 727
HindII	GTYRAC	3 cut(s)	432, 523, 727
HinfI	GANTC	3 cut(s)	157, 476, 718
HpaII	CCGG	5 cut(s)	91, 314, 722, 1033, 1264
HphI	GGTGA	5 cut(s)	89, 122, 461, 937, 1060
Hpy166II	GTNNAC	5 cut(s)	424, 432, 523, 686, 727
Hpy188I	TCNGA	6 cut(s)	123, 301, 592, 835, 857, 1117
Hpy188III	TCNNGA	4 cut(s)	272, 410, 515, 782
Hpy8I	GTNNAC	5 cut(s)	424, 432, 523, 686, 727
Hpy99I	CGWCG	3 cut(s)	105, 230, 333
HpyAV	CCTTC	3 cut(s)	163, 888, 1122
HpyCH4III	ACNGT	2 cut(s)	101, 244
HpyCH4IV	ACGT	2 cut(s)	342, 426
HpyF10VI	GCNNNNNNNGC	3 cut(s)	32, 584, 964
HpyF3I	CTNAG	2 cut(s)	21, 174
HpySE526I	ACGT	2 cut(s)	342, 426
HspAI	GCGC	2 cut(s)	67, 556
KroI	GCCGGC	1 cut(s)	1263
KroNI	GCCGGC	1 cut(s)	1265
Kzo9I	GATC	6 cut(s)	134, 248, 296, 635, 694, 1095
LmnI	GCTCC	1 cut(s)	553
LweI	GCATC	2 cut(s)	1041, 1144
MaeI	CTAG	1 cut(s)	470
MaeII	ACGT	2 cut(s)	342, 426
MaeIII	GTNAC	3 cut(s)	193, 320, 706
MalI	GATC	6 cut(s)	136, 250, 298, 637, 696, 1097
MboI	GATC	6 cut(s)	134, 248, 296, 635, 694, 1095
MboII	GAAGA	6 cut(s)	178, 474, 556, 605, 1130, 1208
MflI	RGATCY	2 cut(s)	635, 1095
MlyI	GAGTC	2 cut(s)	151, 470
MmeI	TCCRAC	3 cut(s)	101, 226, 781
Mph1103I	ATGCAT	2 cut(s)	1022, 1187
MroNI	GCCGGC	1 cut(s)	1263
MroXI	GAANNNNTTC	1 cut(s)	401
MseI	TTAA	6 cut(s)	563, 825, 917, 974, 1023, 1167
MslI	CAYNNNNRTG	2 cut(s)	256, 262
MspI	CCGG	5 cut(s)	91, 314, 722, 1033, 1264
MspR9I	CCNGG	3 cut(s)	315, 1091, 1224
MvaI	CCWGG	2 cut(s)	1091, 1224
MvnI	CGCG	1 cut(s)	29
MwoI	GCNNNNNNNGC	3 cut(s)	32, 584, 964
NaeI	GCCGGC	1 cut(s)	1265
NciI	CCSGG	1 cut(s)	315
NcoI	CCATGG	2 cut(s)	257, 875
NdeII	GATC	6 cut(s)	134, 248, 296, 635, 694, 1095
NgoMIV	GCCGGC	1 cut(s)	1263
NlaIV	GGNNCC	1 cut(s)	805
NmeAIII	GCCGAG	1 cut(s)	289
NmuCI	GTSAC	1 cut(s)	320
NsiI	ATGCAT	2 cut(s)	1022, 1187
NspI	RCATGY	3 cut(s)	684, 958, 1241
PagI	TCATGA	2 cut(s)	271, 514
PciI	ACATGT	1 cut(s)	680
PcsI	WCGNNNNNNNCGW	1 cut(s)	222
PdiI	GCCGGC	1 cut(s)	1265
PdmI	GAANNNNTTC	1 cut(s)	401
PfeI	GAWTC	1 cut(s)	718
PflFI	GACNNNGTC	1 cut(s)	160
PkrI	GCNGC	2 cut(s)	28, 291
Ple19I	CGATCG	1 cut(s)	137
PleI	GAGTC	2 cut(s)	151, 470
PmaCI	CACGTG	1 cut(s)	427
PmlI	CACGTG	1 cut(s)	427
PpsI	GAGTC	2 cut(s)	151, 470
Ppu21I	YACGTR	1 cut(s)	427
PscI	ACATGT	1 cut(s)	680
Psp6I	CCWGG	2 cut(s)	1089, 1222
PspCI	CACGTG	1 cut(s)	427
PspGI	CCWGG	2 cut(s)	1089, 1222
PspN4I	GGNNCC	1 cut(s)	805
PspPI	GGNCC	1 cut(s)	930
PsuI	RGATCY	2 cut(s)	635, 1095
PsyI	GACNNNGTC	1 cut(s)	160
PvuI	CGATCG	1 cut(s)	137
RsaI	GTAC	4 cut(s)	234, 687, 953, 1067
RsaNI	GTAC	4 cut(s)	233, 686, 952, 1066
RseI	CAYNNNNRTG	2 cut(s)	256, 262
SaqAI	TTAA	6 cut(s)	563, 825, 917, 974, 1023, 1167
SatI	GCNGC	2 cut(s)	27, 290
Sau3AI	GATC	6 cut(s)	134, 248, 296, 635, 694, 1095
Sau96I	GGNCC	1 cut(s)	930
ScaI	AGTACT	1 cut(s)	1067
SchI	GAGTC	2 cut(s)	151, 470
ScrFI	CCNGG	3 cut(s)	315, 1091, 1224
SfaNI	GCATC	2 cut(s)	1041, 1144
SinI	GGWCC	1 cut(s)	930
SmiMI	CAYNNNNRTG	2 cut(s)	256, 262
SmlI	CTYRAG	1 cut(s)	236
SmoI	CTYRAG	1 cut(s)	236
SsiI	CCGC	6 cut(s)	27, 281, 289, 458, 939, 1054
SspI	AATATT	1 cut(s)	1004
SspMI	CTAG	1 cut(s)	470
StyD4I	CCNGG	3 cut(s)	313, 1089, 1222
StyI	CCWWGG	3 cut(s)	151, 257, 875
TaaI	ACNGT	2 cut(s)	101, 244
TaiI	ACGT	2 cut(s)	345, 429
TaqI	TCGA	4 cut(s)	133, 137, 164, 693
TatI	WGTACW	3 cut(s)	232, 951, 1065
TauI	GCSGC	2 cut(s)	29, 292
TfiI	GAWTC	1 cut(s)	718
Tru1I	TTAA	6 cut(s)	563, 825, 917, 974, 1023, 1167
Tru9I	TTAA	6 cut(s)	563, 825, 917, 974, 1023, 1167
TscAI	CASTG	4 cut(s)	68, 258, 354, 634
TseFI	GTSAC	1 cut(s)	320
Tsp45I	GTSAC	1 cut(s)	320
TspDTI	ATGAA	2 cut(s)	552, 629
TspRI	CASTG	4 cut(s)	68, 258, 354, 634
Tth111I	GACNNNGTC	1 cut(s)	160
VpaK11BI	GGWCC	1 cut(s)	930
XagI	CCTNNNNNAGG	1 cut(s)	218
XapI	RAATTY	6 cut(s)	739, 827, 845, 977, 992, 1162
XceI	RCATGY	3 cut(s)	684, 958, 1241
XmnI	GAANNNNTTC	1 cut(s)	401
XspI	CTAG	1 cut(s)	470
ZrmI	AGTACT	1 cut(s)	1067
Zsp2I	ATGCAT	2 cut(s)	1022, 1187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.