RLG00000020958

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
70486134 .. 70492423
6290 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020958

Sequence Viewer

Length: 726 bp
ATGGGAAAATATGATATATCCTTGAGCATCAATACATTTGGAGTTCTACATATGTTGAGTTTTGCAAACAAATGCTTAAAGGCTAAACTACATGGATGGCCAAACACCTATTCATTTACAAAGGCGATGGGGGAGGTACTTTTAACTCGTCAGTCTAAGAACAATCTACCTTTTGTTATTGTACGTCTACCTGTAGTTTCCAGCACATACAGTGAACCATTTCCAGGCTGGGTTCAAGGTTACAAAACTATTGATAGCATAATTGGTGGTTACTGTAAAGGGAAGCTCAGATTCCTACTGCTCGATCCTATGACAGTATGTGAAATGGTTCCTGTGGATATGGTGGTAAATTCAATAATAGTAGCCATTGTGGTGAATGCAAATAAGTCATCTGGCATCATTTACCATGTGGGAAGCTCACTAAGAAATCCTATAAAACTCTACGATATATGTGGTTTTATGTTCAAATACTTCACCAAATATCCATGGGTTAATAAGGATGAAAAGTCTATCGTAGTGAAGAAGATTTCAATATTCAAGACTAGGTCTACTTTTCATATGTACATGAAAATTCGCTACTCACTTCCTTTGAAGGGATTAAAGTTGGTGAACAAAGCATCTTGCCAATATTTTCAAGATGTATATGTCAAGTATAACCAGAAATTCAAATTGGCGATGCGCATGGTGGAGCTATACCGTCCCTATATGTTATTCAAGGGCATGTAA

Protein Analysis

242

Amino Acids

27.78

Weight (kDa)

9.82

Isoelectric Point (pI)

29.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_4 PF07993 27 - 119 5.9e-22 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 680
AccI GTMKAC 2 cut(s) 187, 548
AclWI GGATC 1 cut(s) 299
AcoI YGGCCR 1 cut(s) 98
AcsI RAATTY 3 cut(s) 349, 570, 662
AfaI GTAC 3 cut(s) 138, 183, 563
AfiI CCNNNNNNNGG 2 cut(s) 224, 593
AgsI TTSAA 9 cut(s) 236, 354, 466, 531, 538, 592, 635, 667, 715
AjnI CCWGG 1 cut(s) 223
AjuI GAANNNNNNNTTGG 4 cut(s) 94, 126, 653, 685
AluBI AGCT 3 cut(s) 286, 417, 691
AluI AGCT 3 cut(s) 286, 417, 691
AlwI GGATC 1 cut(s) 299
AoxI GGCC 1 cut(s) 98
ApoI RAATTY 3 cut(s) 349, 570, 662
Asp700I GAANNNNTTC 2 cut(s) 219, 327
AspLEI GCGC 1 cut(s) 681
AsuHPI GGTGA 3 cut(s) 385, 466, 619
BalI TGGCCA 1 cut(s) 100
BccI CCATC 2 cut(s) 90, 121
BciT130I CCWGG 1 cut(s) 225
BfaI CTAG 1 cut(s) 543
BfmI CTRYAG 1 cut(s) 192
Bme1390I CCNGG 1 cut(s) 225
BmiI GGNNCC 1 cut(s) 330
BmrFI CCNGG 1 cut(s) 225
BmsI GCATC 4 cut(s) 36, 405, 626, 666
BpuEI CTTGAG 1 cut(s) 43
BsaJI CCNNGG 1 cut(s) 485
Bsc4I CCNNNNNNNGG 2 cut(s) 224, 593
BseBI CCWGG 1 cut(s) 225
BseDI CCNNGG 1 cut(s) 485
BseGI GGATG 2 cut(s) 101, 505
BseLI CCNNNNNNNGG 2 cut(s) 224, 593
BseMII CTCAG 1 cut(s) 301
BseYI CCCAGC 1 cut(s) 228
BshFI GGCC 1 cut(s) 100
BslFI GGGAC 1 cut(s) 684
BslI CCNNNNNNNGG 2 cut(s) 224, 593
BsmFI GGGAC 1 cut(s) 684
BsmI GAATGC 1 cut(s) 382
BsnI GGCC 1 cut(s) 100
Bsp1407I TGTACA 1 cut(s) 561
Bsp143I GATC 1 cut(s) 304
Bsp19I CCATGG 1 cut(s) 485
BspANI GGCC 1 cut(s) 100
BspCNI CTCAG 1 cut(s) 300
BspLI GGNNCC 1 cut(s) 330
BspPI GGATC 1 cut(s) 299
BsrGI TGTACA 1 cut(s) 561
BssECI CCNNGG 1 cut(s) 485
BssMI GATC 1 cut(s) 304
BssT1I CCWWGG 1 cut(s) 485
Bst2UI CCWGG 1 cut(s) 225
Bst4CI ACNGT 4 cut(s) 212, 275, 316, 698
BstAUI TGTACA 1 cut(s) 561
BstDEI CTNAG 3 cut(s) 156, 287, 422
BstDSI CCRYGG 1 cut(s) 485
BstF5I GGATG 2 cut(s) 101, 505
BstHHI GCGC 1 cut(s) 681
BstKTI GATC 1 cut(s) 307
BstMBI GATC 1 cut(s) 304
BstNI CCWGG 1 cut(s) 225
BstNSI RCATGY 1 cut(s) 724
BstSCI CCNGG 1 cut(s) 223
BstSFI CTRYAG 1 cut(s) 192
BsuRI GGCC 1 cut(s) 100
BtgI CCRYGG 1 cut(s) 485
BtgZI GCGATG 2 cut(s) 140, 689
BtsCI GGATG 2 cut(s) 101, 505
BtsIMutI CAGTG 1 cut(s) 217
CfoI GCGC 1 cut(s) 681
Csp6I GTAC 3 cut(s) 137, 182, 562
CviAII CATG 6 cut(s) 92, 407, 486, 565, 682, 721
CviJI RGCY 7 cut(s) 83, 100, 228, 286, 365, 417, 691
CviKI_1 RGCY 7 cut(s) 83, 100, 228, 286, 365, 417, 691
CviQI GTAC 3 cut(s) 137, 182, 562
DdeI CTNAG 3 cut(s) 156, 287, 422
DpnI GATC 1 cut(s) 306
DpnII GATC 1 cut(s) 304
EaeI YGGCCR 1 cut(s) 98
Eco130I CCWWGG 1 cut(s) 485
EcoRII CCWGG 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 485
ErhI CCWWGG 1 cut(s) 485
FaeI CATG 6 cut(s) 95, 410, 489, 568, 685, 724
FaqI GGGAC 1 cut(s) 684
FatI CATG 6 cut(s) 91, 406, 485, 564, 681, 720
FauNDI CATATG 2 cut(s) 51, 558
FblI GTMKAC 2 cut(s) 187, 548
FokI GGATG 2 cut(s) 108, 512
FspAI RTGCGCAY 1 cut(s) 680
FspBI CTAG 1 cut(s) 543
FspI TGCGCA 1 cut(s) 680
GlaI GCGC 1 cut(s) 680
GsaI CCCAGC 1 cut(s) 232
HaeIII GGCC 1 cut(s) 100
HhaI GCGC 1 cut(s) 681
Hin1II CATG 6 cut(s) 95, 410, 489, 568, 685, 724
Hin6I GCGC 1 cut(s) 679
HinP1I GCGC 1 cut(s) 679
HinfI GANTC 1 cut(s) 291
HphI GGTGA 3 cut(s) 385, 466, 619
Hpy166II GTNNAC 4 cut(s) 188, 215, 549, 610
Hpy188I TCNGA 1 cut(s) 290
Hpy188III TCNNGA 2 cut(s) 538, 635
Hpy8I GTNNAC 4 cut(s) 188, 215, 549, 610
HpyAV CCTTC 1 cut(s) 586
HpyCH4III ACNGT 4 cut(s) 212, 275, 316, 698
HpyCH4IV ACGT 1 cut(s) 184
HpyCH4V TGCA 2 cut(s) 65, 380
HpyF3I CTNAG 3 cut(s) 156, 287, 422
HpySE526I ACGT 1 cut(s) 184
Hsp92II CATG 6 cut(s) 95, 410, 489, 568, 685, 724
HspAI GCGC 1 cut(s) 679
Kzo9I GATC 1 cut(s) 304
LmnI GCTCC 1 cut(s) 688
LpnPI CCDG 8 cut(s) 204, 210, 214, 214, 237, 345, 378, 671
LweI GCATC 4 cut(s) 36, 405, 626, 666
MaeI CTAG 1 cut(s) 543
MaeII ACGT 1 cut(s) 184
MaeIII GTNAC 2 cut(s) 239, 269
MalI GATC 1 cut(s) 306
MboI GATC 1 cut(s) 304
MboII GAAGA 2 cut(s) 532, 535
MlsI TGGCCA 1 cut(s) 100
MluCI AATT 5 cut(s) 261, 349, 570, 662, 668
MluNI TGGCCA 1 cut(s) 100
MnlI CCTC 1 cut(s) 127
Mox20I TGGCCA 1 cut(s) 100
MroXI GAANNNNTTC 2 cut(s) 219, 327
MscI TGGCCA 1 cut(s) 100
MseI TTAA 4 cut(s) 77, 143, 492, 599
MslI CAYNNNNRTG 1 cut(s) 371
Msp20I TGGCCA 1 cut(s) 100
MspR9I CCNGG 1 cut(s) 225
Mva1269I GAATGC 1 cut(s) 382
MvaI CCWGG 1 cut(s) 225
NcoI CCATGG 1 cut(s) 485
NdeI CATATG 2 cut(s) 51, 558
NdeII GATC 1 cut(s) 304
NlaIII CATG 6 cut(s) 95, 410, 489, 568, 685, 724
NlaIV GGNNCC 1 cut(s) 330
NsbI TGCGCA 1 cut(s) 680
NspI RCATGY 1 cut(s) 724
PctI GAATGC 1 cut(s) 382
PdmI GAANNNNTTC 2 cut(s) 219, 327
PfeI GAWTC 1 cut(s) 291
PflFI GACNNNGTC 1 cut(s) 544
Psp6I CCWGG 1 cut(s) 223
PspFI CCCAGC 1 cut(s) 228
PspGI CCWGG 1 cut(s) 223
PspN4I GGNNCC 1 cut(s) 330
PsyI GACNNNGTC 1 cut(s) 544
RsaI GTAC 3 cut(s) 138, 183, 563
RsaNI GTAC 3 cut(s) 137, 182, 562
RseI CAYNNNNRTG 1 cut(s) 371
SaqAI TTAA 4 cut(s) 77, 143, 492, 599
Sau3AI GATC 1 cut(s) 304
ScrFI CCNGG 1 cut(s) 225
SfaNI GCATC 4 cut(s) 36, 405, 626, 666
SfcI CTRYAG 1 cut(s) 192
SmiMI CAYNNNNRTG 1 cut(s) 371
SmlI CTYRAG 1 cut(s) 22
SmoI CTYRAG 1 cut(s) 22
Sse9I AATT 5 cut(s) 261, 349, 570, 662, 668
SspI AATATT 2 cut(s) 534, 629
SspMI CTAG 1 cut(s) 543
StyD4I CCNGG 1 cut(s) 223
StyI CCWWGG 1 cut(s) 485
TaaI ACNGT 4 cut(s) 212, 275, 316, 698
TaiI ACGT 1 cut(s) 187
TaqI TCGA 1 cut(s) 303
TasI AATT 5 cut(s) 261, 349, 570, 662, 668
TatI WGTACW 1 cut(s) 561
TfiI GAWTC 1 cut(s) 291
Tru1I TTAA 4 cut(s) 77, 143, 492, 599
Tru9I TTAA 4 cut(s) 77, 143, 492, 599
TscAI CASTG 1 cut(s) 217
TspDTI ATGAA 4 cut(s) 102, 516, 545, 581
TspRI CASTG 1 cut(s) 217
Tth111I GACNNNGTC 1 cut(s) 544
XapI RAATTY 3 cut(s) 349, 570, 662
XceI RCATGY 1 cut(s) 724
XcmI CCANNNNNNNNNTGG 1 cut(s) 225
XmiI GTMKAC 2 cut(s) 187, 548
XmnI GAANNNNTTC 2 cut(s) 219, 327
XspI CTAG 1 cut(s) 543
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.