RchiOBHm_Chr5g0069131

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
75078250 .. 75082393
4144 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34452

Sequence Viewer

Length: 1041 bp
ATGGCCCGTCCGACAACTGTCGAGAGGGCGTGCCCATATGTGTGTGATGAAAAGGTTGGACTCATACTAGAAGACTCAACTTCAATGAGTAAGAGGGTCAAGAAGATGCCTAGATTTGATTTCGAGGTAGTAGAAAAGAGCCTAGTTAATGAGAAATTGAATGAATTGAACACACAAGATGCTTCAAAAGAAGTTATTACAAATACATTGAAGGATCTCGGCATTGAAAGAGCCAAACTACATGGATGGCCAAACCCATATGTATTTACAAAGGCGATGGGAGAAGTACTCTTAAGTCATCATTCTAAGAACAATCTACCTTTTGATATTCTACGTCCACCTATAATTTCCAGCACATACAGTGAACCATTTCCAGGTTGGGTTCAAGGTTACGGAACGGTTGATAGCGTAATTGCTGCTTATTGTAAAGGAAAGCTGACACGCCTACTTATCGATCCTATGACAATAGGTGATATGGTGAGTTTAAGTATTCCTGTGGATATGGTGGTAAATTCAATAATAGTAGCCATTGTGGTGAATGCAAATAAGTCATCTGGCATCATTTACCATGTGGGAAGCTCACTAAGAAATCCTATAAAATTCTACGATATTCTTAGTTTTATGTTCAAATACTTCACCAAATTTCCATGGGTTAATAATGATGAAAAGCCGATCGTAGTGAGGAAGATCTCAACATTCAAGACTATGGCTACTTTTCATATGTATATGAAAATTCGCCACTCACTTCCTTTGAAGGGATTAAAATTGGTGAACAAAGTATCTGGCCAATCTTTCCAAGATGTATATGTCAAGTATAACCGGAAACTCAGATTAGCGATGCGTATGGCGGAGCTATATCGTCCCTATCTGCTATTCAAGGGCATTTTTGACGACAACAACACAGAGGAGTTGCGAAAGATAACAAAAGAAGGTTACATAGAAGCAAAAGATTTTAATTTTGATCCGACATGCATTGATTGGGAAGACTACATTATGAACACTCACATTCCAGGATTCCTGAAACATGTTCTAATCAAATGA

Protein Analysis

346

Amino Acids

39.77

Weight (kDa)

9.21

Isoelectric Point (pI)

33.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_4 PF07993 58 - 173 1.3e-18 Male sterility protein
Sterile PF03015 247 - 344 1.1e-16 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 848
AclWI GGATC 3 cut(s) 222, 449, 956
AcoI YGGCCR 2 cut(s) 248, 784
AcsI RAATTY 4 cut(s) 511, 599, 641, 732
AfaI GTAC 1 cut(s) 288
AfiI CCNNNNNNNGG 2 cut(s) 374, 755
AflII CTTAAG 1 cut(s) 292
AflIII ACRYGT 1 cut(s) 1024
AjnI CCWGG 2 cut(s) 373, 1009
AluBI AGCT 3 cut(s) 436, 579, 853
AluI AGCT 3 cut(s) 436, 579, 853
AlwI GGATC 3 cut(s) 222, 449, 956
AoxI GGCC 3 cut(s) 3, 248, 784
ApeKI GCWGC 1 cut(s) 416
ApoI RAATTY 4 cut(s) 511, 599, 641, 732
Asp700I GAANNNNTTC 1 cut(s) 369
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 5 cut(s) 482, 490, 547, 628, 781
BaeGI GKGCMC 1 cut(s) 35
BalI TGGCCA 2 cut(s) 250, 786
BbsI GAAGAC 2 cut(s) 78, 990
BbvI GCAGC 1 cut(s) 403
BccI CCATC 2 cut(s) 240, 271
BciT130I CCWGG 2 cut(s) 375, 1011
BfaI CTAG 3 cut(s) 68, 111, 143
BfrI CTTAAG 1 cut(s) 292
BglII AGATCT 1 cut(s) 687
BisI GCNGC 1 cut(s) 417
BlsI GCNGC 1 cut(s) 418
BmcAI AGTACT 1 cut(s) 288
Bme1390I CCNGG 2 cut(s) 375, 1011
BmgT120I GGNCC 1 cut(s) 4
BmrFI CCNGG 2 cut(s) 375, 1011
BmsI GCATC 4 cut(s) 96, 169, 567, 828
BoxI GACNNNNGTC 1 cut(s) 17
BpiI GAAGAC 2 cut(s) 78, 990
BplI GAGNNNNNCTC 2 cut(s) 273, 305
Bsa29I ATCGAT 1 cut(s) 453
BsaJI CCNNGG 1 cut(s) 647
BsaWI WCCGGW 1 cut(s) 819
Bsc4I CCNNNNNNNGG 2 cut(s) 374, 755
BseBI CCWGG 2 cut(s) 375, 1011
BseCI ATCGAT 1 cut(s) 453
BseDI CCNNGG 1 cut(s) 647
BseGI GGATG 1 cut(s) 251
BseLI CCNNNNNNNGG 2 cut(s) 374, 755
BseMII CTCAG 1 cut(s) 841
BseRI GAGGAG 1 cut(s) 920
BseSI GKGCMC 1 cut(s) 35
BseXI GCAGC 1 cut(s) 403
Bsh1285I CGRYCG 1 cut(s) 675
BshFI GGCC 3 cut(s) 5, 250, 786
BshVI ATCGAT 1 cut(s) 453
BsiEI CGRYCG 1 cut(s) 675
BsiSI CCGG 1 cut(s) 820
BslFI GGGAC 1 cut(s) 846
BslI CCNNNNNNNGG 2 cut(s) 374, 755
BsmFI GGGAC 1 cut(s) 846
BsmI GAATGC 1 cut(s) 544
BsnI GGCC 3 cut(s) 5, 250, 786
Bsp1286I GDGCHC 1 cut(s) 35
Bsp143I GATC 5 cut(s) 214, 454, 672, 687, 961
Bsp19I CCATGG 1 cut(s) 647
BspACI CCGC 1 cut(s) 848
BspANI GGCC 3 cut(s) 5, 250, 786
BspCNI CTCAG 1 cut(s) 840
BspDI ATCGAT 1 cut(s) 453
BspPI GGATC 3 cut(s) 222, 449, 956
BspTI CTTAAG 1 cut(s) 292
BssECI CCNNGG 1 cut(s) 647
BssMI GATC 5 cut(s) 214, 454, 672, 687, 961
BssT1I CCWWGG 1 cut(s) 647
Bst2UI CCWGG 2 cut(s) 375, 1011
Bst4CI ACNGT 3 cut(s) 19, 362, 400
BstAFI CTTAAG 1 cut(s) 292
BstC8I GCNNGC 1 cut(s) 31
BstDEI CTNAG 4 cut(s) 306, 584, 614, 827
BstDSI CCRYGG 1 cut(s) 647
BstF5I GGATG 1 cut(s) 251
BstKTI GATC 5 cut(s) 217, 457, 675, 690, 964
BstMBI GATC 5 cut(s) 214, 454, 672, 687, 961
BstMCI CGRYCG 1 cut(s) 675
BstNI CCWGG 2 cut(s) 375, 1011
BstNSI RCATGY 2 cut(s) 972, 1028
BstPAI GACNNNNGTC 1 cut(s) 17
BstSCI CCNGG 2 cut(s) 373, 1009
BstSLI GKGCMC 1 cut(s) 35
BstV1I GCAGC 1 cut(s) 403
BstV2I GAAGAC 2 cut(s) 78, 990
BstX2I RGATCY 2 cut(s) 214, 687
BstYI RGATCY 2 cut(s) 214, 687
Bsu15I ATCGAT 1 cut(s) 453
BsuRI GGCC 3 cut(s) 5, 250, 786
BsuTUI ATCGAT 1 cut(s) 453
BtgI CCRYGG 1 cut(s) 647
BtgZI GCGATG 2 cut(s) 290, 851
BtsCI GGATG 1 cut(s) 251
BtsIMutI CAGTG 1 cut(s) 367
Cac8I GCNNGC 1 cut(s) 31
Cfr13I GGNCC 1 cut(s) 4
ClaI ATCGAT 1 cut(s) 453
Csp6I GTAC 1 cut(s) 287
CviAII CATG 5 cut(s) 242, 569, 648, 969, 1025
CviQI GTAC 1 cut(s) 287
DdeI CTNAG 4 cut(s) 306, 584, 614, 827
DpnI GATC 5 cut(s) 216, 456, 674, 689, 963
DpnII GATC 5 cut(s) 214, 454, 672, 687, 961
EaeI YGGCCR 2 cut(s) 248, 784
EciI GGCGGA 1 cut(s) 863
Eco130I CCWWGG 1 cut(s) 647
EcoRII CCWGG 2 cut(s) 373, 1009
EcoT14I CCWWGG 1 cut(s) 647
EcoT22I ATGCAT 1 cut(s) 974
ErhI CCWWGG 1 cut(s) 647
FaeI CATG 5 cut(s) 245, 572, 651, 972, 1028
FaqI GGGAC 1 cut(s) 846
FatI CATG 5 cut(s) 241, 568, 647, 968, 1024
FauNDI CATATG 3 cut(s) 37, 259, 720
Fnu4HI GCNGC 1 cut(s) 417
FokI GGATG 1 cut(s) 258
Fsp4HI GCNGC 1 cut(s) 417
FspBI CTAG 3 cut(s) 68, 111, 143
GluI GCNGC 1 cut(s) 417
HaeIII GGCC 3 cut(s) 5, 250, 786
HapII CCGG 1 cut(s) 820
Hin1II CATG 5 cut(s) 245, 572, 651, 972, 1028
HinfI GANTC 3 cut(s) 60, 74, 1014
HpaII CCGG 1 cut(s) 820
HphI GGTGA 5 cut(s) 482, 490, 547, 628, 781
Hpy166II GTNNAC 3 cut(s) 338, 365, 772
Hpy188I TCNGA 3 cut(s) 12, 830, 966
Hpy188III TCNNGA 4 cut(s) 22, 100, 700, 1018
Hpy8I GTNNAC 3 cut(s) 338, 365, 772
HpyAV CCTTC 3 cut(s) 205, 748, 923
HpyCH4III ACNGT 3 cut(s) 19, 362, 400
HpyCH4IV ACGT 1 cut(s) 334
HpyCH4V TGCA 2 cut(s) 542, 972
HpyF3I CTNAG 4 cut(s) 306, 584, 614, 827
HpySE526I ACGT 1 cut(s) 334
Hsp92II CATG 5 cut(s) 245, 572, 651, 972, 1028
Kzo9I GATC 5 cut(s) 214, 454, 672, 687, 961
LmnI GCTCC 1 cut(s) 850
Lsp1109I GCAGC 1 cut(s) 403
LweI GCATC 4 cut(s) 96, 169, 567, 828
MaeI CTAG 3 cut(s) 68, 111, 143
MaeII ACGT 1 cut(s) 334
MaeIII GTNAC 2 cut(s) 389, 932
MalI GATC 5 cut(s) 216, 456, 674, 689, 963
MboI GATC 5 cut(s) 214, 454, 672, 687, 961
MboII GAAGA 4 cut(s) 83, 115, 697, 995
MflI RGATCY 2 cut(s) 214, 687
MhlI GDGCHC 1 cut(s) 35
MlsI TGGCCA 2 cut(s) 250, 786
MluNI TGGCCA 2 cut(s) 250, 786
MlyI GAGTC 2 cut(s) 54, 68
MmeI TCCRAC 3 cut(s) 35, 37, 989
MnlI CCTC 5 cut(s) 18, 87, 118, 675, 898
Mox20I TGGCCA 2 cut(s) 250, 786
Mph1103I ATGCAT 1 cut(s) 974
MroXI GAANNNNTTC 1 cut(s) 369
MscI TGGCCA 2 cut(s) 250, 786
MseI TTAA 6 cut(s) 147, 293, 485, 654, 761, 954
MslI CAYNNNNRTG 2 cut(s) 40, 533
Msp20I TGGCCA 2 cut(s) 250, 786
MspCI CTTAAG 1 cut(s) 292
MspI CCGG 1 cut(s) 820
MspR9I CCNGG 2 cut(s) 375, 1011
Mva1269I GAATGC 1 cut(s) 544
MvaI CCWGG 2 cut(s) 375, 1011
NcoI CCATGG 1 cut(s) 647
NdeI CATATG 3 cut(s) 37, 259, 720
NdeII GATC 5 cut(s) 214, 454, 672, 687, 961
NlaIII CATG 5 cut(s) 245, 572, 651, 972, 1028
NmeAIII GCCGAG 1 cut(s) 198
NsiI ATGCAT 1 cut(s) 974
NspI RCATGY 2 cut(s) 972, 1028
PciI ACATGT 1 cut(s) 1024
PctI GAATGC 1 cut(s) 544
PdmI GAANNNNTTC 1 cut(s) 369
PfeI GAWTC 1 cut(s) 1014
PfoI TCCNGGA 1 cut(s) 1009
PkrI GCNGC 1 cut(s) 418
Ple19I CGATCG 1 cut(s) 675
PleI GAGTC 2 cut(s) 54, 68
PpsI GAGTC 2 cut(s) 54, 68
PscI ACATGT 1 cut(s) 1024
PshAI GACNNNNGTC 1 cut(s) 17
Psp6I CCWGG 2 cut(s) 373, 1009
PspGI CCWGG 2 cut(s) 373, 1009
PspPI GGNCC 1 cut(s) 4
PsuI RGATCY 2 cut(s) 214, 687
PvuI CGATCG 1 cut(s) 675
RsaI GTAC 1 cut(s) 288
RsaNI GTAC 1 cut(s) 287
RseI CAYNNNNRTG 2 cut(s) 40, 533
SaqAI TTAA 6 cut(s) 147, 293, 485, 654, 761, 954
SatI GCNGC 1 cut(s) 417
Sau3AI GATC 5 cut(s) 214, 454, 672, 687, 961
Sau96I GGNCC 1 cut(s) 4
ScaI AGTACT 1 cut(s) 288
SchI GAGTC 2 cut(s) 54, 68
ScrFI CCNGG 2 cut(s) 375, 1011
SduI GDGCHC 1 cut(s) 35
SfaNI GCATC 4 cut(s) 96, 169, 567, 828
SmiMI CAYNNNNRTG 2 cut(s) 40, 533
SmlI CTYRAG 1 cut(s) 292
SmoI CTYRAG 1 cut(s) 292
SsiI CCGC 1 cut(s) 848
SspMI CTAG 3 cut(s) 68, 111, 143
StyD4I CCNGG 2 cut(s) 373, 1009
StyI CCWWGG 1 cut(s) 647
TaaI ACNGT 3 cut(s) 19, 362, 400
TaiI ACGT 1 cut(s) 337
TaqI TCGA 3 cut(s) 21, 123, 453
TatI WGTACW 1 cut(s) 286
TfiI GAWTC 1 cut(s) 1014
Tru1I TTAA 6 cut(s) 147, 293, 485, 654, 761, 954
Tru9I TTAA 6 cut(s) 147, 293, 485, 654, 761, 954
TscAI CASTG 1 cut(s) 367
TseI GCWGC 1 cut(s) 416
TspDTI ATGAA 6 cut(s) 63, 177, 678, 707, 743, 1010
TspGWI ACGGA 1 cut(s) 408
TspRI CASTG 1 cut(s) 367
Vha464I CTTAAG 1 cut(s) 292
XapI RAATTY 4 cut(s) 511, 599, 641, 732
XceI RCATGY 2 cut(s) 972, 1028
XcmI CCANNNNNNNNNTGG 1 cut(s) 375
XmnI GAANNNNTTC 1 cut(s) 369
XspI CTAG 3 cut(s) 68, 111, 143
ZrmI AGTACT 1 cut(s) 288
Zsp2I ATGCAT 1 cut(s) 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.