RchiOBHm_Chr7g0219381

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
37789508 .. 37793254
3747 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19634

Sequence Viewer

Length: 1494 bp
ATGGAATTTGAGAGCATTTCAGGAAACTTGAAGGACAAGAATATCTTAATCACTGGAGCTACCGGCTTTGTAGGAAAGGGATCTCTCATCTTGGTAGAGAAAATATTAAGAGTTCAACCAAACGTGAAAAAGCTCTATCTTCTTTTAAGAGCTTCCGACACCAACTCAGCCGGAAAACGCATGCATAATGAGATCACAGGGAAAGAGTTGTTTAGGGTTCTGAGGGAGAAATGGGGTGCAGATTTTGATTCCTTCATATTAGAAAAAGTTGTTCCTCTGTCTGGAGACGTAATTTTTGAAGACCTAGGAGTGAAGGTAATCAAACAAAAGGAAGAGATATGCAATGAAGTACATATCATAATTAATTCTGCAGCAACCACCAAGTTTGATGAAAGGTATGATGTTGCATTGGAAGTGAATACATTTGGAGTTTTGAATATGTTGGACTTTGCAAAAAAATGCTTGAAATTGGAGATGGTTGTCCACGTGTCAACAGCCTATGTGTGTGGTGAAAGGGTAGGGCTGATACTAGAGGACTCCTCTTCAATGGAAGAGATGGCGAAAAAACCCAGTAAATTTTACTTGAAATCACAGGAAAAAAAAATAGTGGAGAGCAAATTGAAAGAACTACAAGCACAGAATGCTTCGGAAGAAGTTATAACAAATGCAATGAAGGACTTAGGCACTACAAGGTCTAAGTTGTACGGGTGGCCAAATACCTACGTTCTTACAAAGGTGATGGGAGAAATGTATCTAGGGCATGCAAAAGGTAATCTATCCATTGCTATTATACGTCCAACCATGATTACAAGTACATATAAGGAGCCATTTTCAGGCTGGATCGAAGGTTTCAGGACCTATGATAGTCTAATTGGTGGTTATTGGAAAGGGAAGCTCACAGGCATACCTGTCGATCCTATGTCAGTAGTGGATATGATTCCAGTTGACATGGTGGTAAATTCGATAATTACAGCAATGGTAGTTAATGCGAATAAATCTGGCAAAATCATTTACCACGTGGGAACATCATTGCGAAATCCCTTAACATTTTCTGATTTTAACAACTTTATGTTCCAATATTGCACCAAAAATCCGTGGCTTAACAATGATGGAAGCCCCGTCAAGGTTAAAAAGTTGAAAATGTTGAGGAGTATGGACGCTTTTCACTTGTACATGCAAATACCATTGCAGGCATTAAAGTTCATGAACAAGGAATTTGACCAATATTTCCAAGACGTATACGTTAACTATAACAGGAAAGTCAAATCAGTGAAACGGTTGGTTGATCTCTACAGAGCATATTTGCTATTCAAGGGCATCTTTTACGACACTAATACAGAAGAGCTGCGAAGGATAGCAAGTGAGAACTACACAGATGCAGAAAATTTTAATTTTGATCCAAAATGCATAGATTGGGAAGACTACTATATGCATACTCATATTCCGGGCTTTGCACAGCATGTTGTCATCAAACACAGCCGAAGTCGACTCTGA

Protein Analysis

497

Amino Acids

56.91

Weight (kDa)

8.88

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_4 PF07993 17 - 322 3.6e-69 Male sterility protein
Sterile PF03015 394 - 489 1.1e-13 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 659
AccI GTMKAC 2 cut(s) 1239, 1486
AclWI GGATC 4 cut(s) 88, 848, 908, 1391
AcoI YGGCCR 1 cut(s) 710
AcsI RAATTY 5 cut(s) 5, 575, 958, 1214, 1384
AcvI CACGTG 2 cut(s) 487, 1018
AfaI GTAC 4 cut(s) 351, 704, 814, 1172
AfiI CCNNNNNNNGG 3 cut(s) 281, 833, 1123
AflIII ACRYGT 1 cut(s) 486
AluBI AGCT 5 cut(s) 59, 133, 152, 895, 1345
AluI AGCT 5 cut(s) 59, 133, 152, 895, 1345
Alw26I GTCTC 1 cut(s) 279
AlwI GGATC 4 cut(s) 88, 848, 908, 1391
AoxI GGCC 1 cut(s) 710
ApeKI GCWGC 2 cut(s) 371, 1345
ApoI RAATTY 5 cut(s) 5, 575, 958, 1214, 1384
ArsI GACNNNNNNTTYG 2 cut(s) 278, 310
AseI ATTAAT 1 cut(s) 363
AspA2I CCTAGG 1 cut(s) 304
AspS9I GGNCC 1 cut(s) 855
AsuC2I CCSGG 1 cut(s) 1446
AsuHPI GGTGA 2 cut(s) 521, 748
AvaII GGWCC 1 cut(s) 855
AvrII CCTAGG 1 cut(s) 304
BalI TGGCCA 1 cut(s) 712
BbrPI CACGTG 2 cut(s) 487, 1018
BbsI GAAGAC 2 cut(s) 306, 1425
BbvI GCAGC 2 cut(s) 383, 1332
BccI CCATC 4 cut(s) 469, 550, 733, 1103
BcgI CGANNNNNNTGC 2 cut(s) 892, 926
BcnI CCSGG 1 cut(s) 1446
BcoDI GTCTC 1 cut(s) 279
BfaI CTAG 3 cut(s) 305, 530, 755
BfmI CTRYAG 2 cut(s) 369, 1291
BisI GCNGC 2 cut(s) 372, 1346
BlnI CCTAGG 1 cut(s) 304
BlsI GCNGC 2 cut(s) 373, 1347
Bme1390I CCNGG 1 cut(s) 1446
Bme18I GGWCC 1 cut(s) 855
BmgT120I GGNCC 1 cut(s) 855
BmiI GGNNCC 1 cut(s) 825
BmrFI CCNGG 1 cut(s) 1446
BmrI ACTGGG 1 cut(s) 564
BmsI GCATC 2 cut(s) 1326, 1366
BmuI ACTGGG 1 cut(s) 564
BpiI GAAGAC 2 cut(s) 306, 1425
BplI GAGNNNNNCTC 2 cut(s) 524, 556
BpmI CTGGAG 2 cut(s) 75, 303
BpuMI CCSGG 1 cut(s) 1446
BsaAI YACGTR 2 cut(s) 487, 1018
BsaJI CCNNGG 2 cut(s) 304, 1094
BsaXI ACNNNNNCTCC 2 cut(s) 300, 330
Bsc4I CCNNNNNNNGG 3 cut(s) 281, 833, 1123
Bse118I RCCGGY 1 cut(s) 62
Bse1I ACTGG 3 cut(s) 58, 570, 941
Bse3DI GCAATG 6 cut(s) 349, 675, 780, 981, 1028, 1184
BseDI CCNNGG 2 cut(s) 304, 1094
BseLI CCNNNNNNNGG 3 cut(s) 281, 833, 1123
BseMI GCAATG 6 cut(s) 349, 675, 780, 981, 1028, 1184
BseMII CTCAG 2 cut(s) 180, 212
BseNI ACTGG 3 cut(s) 58, 570, 941
BseRI GAGGAG 2 cut(s) 529, 1162
BseXI GCAGC 2 cut(s) 383, 1332
BsgI GTGCAG 1 cut(s) 258
BshFI GGCC 1 cut(s) 712
BsiSI CCGG 3 cut(s) 63, 171, 1445
BslI CCNNNNNNNGG 3 cut(s) 281, 833, 1123
BsmAI GTCTC 1 cut(s) 279
BsmBI CGTCTC 1 cut(s) 279
BsmI GAATGC 1 cut(s) 646
BsnI GGCC 1 cut(s) 712
Bsp1407I TGTACA 1 cut(s) 1170
Bsp143I GATC 6 cut(s) 80, 192, 840, 913, 1285, 1396
BspANI GGCC 1 cut(s) 712
BspCNI CTCAG 2 cut(s) 179, 213
BspHI TCATGA 1 cut(s) 1203
BspLI GGNNCC 1 cut(s) 825
BspMAI CTGCAG 1 cut(s) 373
BspPI GGATC 4 cut(s) 88, 848, 908, 1391
BspQI GCTCTTC 1 cut(s) 1335
BsrDI GCAATG 6 cut(s) 349, 675, 780, 981, 1028, 1184
BsrFI RCCGGY 1 cut(s) 62
BsrGI TGTACA 1 cut(s) 1170
BsrI ACTGG 3 cut(s) 58, 570, 941
BssAI RCCGGY 1 cut(s) 62
BssECI CCNNGG 2 cut(s) 304, 1094
BssMI GATC 6 cut(s) 80, 192, 840, 913, 1285, 1396
BssNAI GTATAC 1 cut(s) 1240
BssT1I CCWWGG 1 cut(s) 304
Bst1107I GTATAC 1 cut(s) 1240
Bst4CI ACNGT 1 cut(s) 1278
Bst6I CTCTTC 4 cut(s) 327, 546, 547, 1335
BstAPI GCANNNNNTGC 1 cut(s) 641
BstAUI TGTACA 1 cut(s) 1170
BstBAI YACGTR 2 cut(s) 487, 1018
BstC8I GCNNGC 3 cut(s) 182, 762, 1191
BstDEI CTNAG 4 cut(s) 166, 221, 679, 696
BstDSI CCRYGG 1 cut(s) 1094
BstKTI GATC 6 cut(s) 83, 195, 843, 916, 1288, 1399
BstMAI GTCTC 1 cut(s) 279
BstMBI GATC 6 cut(s) 80, 192, 840, 913, 1285, 1396
BstMWI GCNNNNNNNGC 1 cut(s) 641
BstNSI RCATGY 4 cut(s) 184, 764, 1177, 1463
BstSCI CCNGG 1 cut(s) 1444
BstSFI CTRYAG 2 cut(s) 369, 1291
BstV1I GCAGC 2 cut(s) 383, 1332
BstV2I GAAGAC 2 cut(s) 306, 1425
BstX2I RGATCY 1 cut(s) 80
BstYI RGATCY 1 cut(s) 80
BstZ17I GTATAC 1 cut(s) 1240
BsuRI GGCC 1 cut(s) 712
BtgI CCRYGG 1 cut(s) 1094
BtsIMutI CAGTG 2 cut(s) 51, 1275
Cac8I GCNNGC 3 cut(s) 182, 762, 1191
CciI TCATGA 1 cut(s) 1203
Cfr10I RCCGGY 1 cut(s) 62
Cfr13I GGNCC 1 cut(s) 855
CseI GACGC 1 cut(s) 1166
Csp6I GTAC 4 cut(s) 350, 703, 813, 1171
CspCI CAANNNNNGTGG 2 cut(s) 367, 402
CviAII CATG 7 cut(s) 181, 761, 802, 949, 1174, 1204, 1460
CviQI GTAC 4 cut(s) 350, 703, 813, 1171
DdeI CTNAG 4 cut(s) 166, 221, 679, 696
DpnI GATC 6 cut(s) 82, 194, 842, 915, 1287, 1398
DpnII GATC 6 cut(s) 80, 192, 840, 913, 1285, 1396
EaeI YGGCCR 1 cut(s) 710
Eam1104I CTCTTC 4 cut(s) 327, 546, 547, 1335
EarI CTCTTC 4 cut(s) 327, 546, 547, 1335
Eco130I CCWWGG 1 cut(s) 304
Eco47I GGWCC 1 cut(s) 855
Eco72I CACGTG 2 cut(s) 487, 1018
EcoO109I RGGNCCY 1 cut(s) 855
EcoT14I CCWWGG 1 cut(s) 304
EcoT22I ATGCAT 3 cut(s) 186, 1409, 1434
ErhI CCWWGG 1 cut(s) 304
Esp3I CGTCTC 1 cut(s) 279
FaeI CATG 7 cut(s) 184, 764, 805, 952, 1177, 1207, 1463
FalI AAGNNNNNCTT 4 cut(s) 29, 61, 1304, 1336
FatI CATG 7 cut(s) 180, 760, 801, 948, 1173, 1203, 1459
FblI GTMKAC 2 cut(s) 1239, 1486
Fnu4HI GCNGC 2 cut(s) 372, 1346
Fsp4HI GCNGC 2 cut(s) 372, 1346
FspBI CTAG 3 cut(s) 305, 530, 755
GluI GCNGC 2 cut(s) 372, 1346
GsuI CTGGAG 2 cut(s) 75, 303
HaeIII GGCC 1 cut(s) 712
HapII CCGG 3 cut(s) 63, 171, 1445
HgaI GACGC 1 cut(s) 1166
Hin1II CATG 7 cut(s) 184, 764, 805, 952, 1177, 1207, 1463
HincII GTYRAC 4 cut(s) 492, 946, 1246, 1487
HindII GTYRAC 4 cut(s) 492, 946, 1246, 1487
HinfI GANTC 4 cut(s) 248, 536, 937, 1488
HpaI GTTAAC 1 cut(s) 1246
HpaII CCGG 3 cut(s) 63, 171, 1445
HphI GGTGA 2 cut(s) 521, 748
Hpy166II GTNNAC 6 cut(s) 484, 492, 946, 1240, 1246, 1487
Hpy188I TCNGA 5 cut(s) 157, 222, 649, 1054, 1493
Hpy188III TCNNGA 4 cut(s) 21, 282, 853, 1204
Hpy8I GTNNAC 6 cut(s) 484, 492, 946, 1240, 1246, 1487
HpyAV CCTTC 6 cut(s) 25, 262, 307, 667, 839, 1344
HpyCH4III ACNGT 1 cut(s) 1278
HpyCH4IV ACGT 8 cut(s) 123, 288, 486, 723, 793, 1017, 1236, 1242
HpyF10VI GCNNNNNNNGC 1 cut(s) 641
HpyF3I CTNAG 4 cut(s) 166, 221, 679, 696
HpySE526I ACGT 8 cut(s) 123, 288, 486, 723, 793, 1017, 1236, 1242
Hsp92II CATG 7 cut(s) 184, 764, 805, 952, 1177, 1207, 1463
KspAI GTTAAC 1 cut(s) 1246
Kzo9I GATC 6 cut(s) 80, 192, 840, 913, 1285, 1396
LguI GCTCTTC 1 cut(s) 1335
LmnI GCTCC 2 cut(s) 56, 823
Lsp1109I GCAGC 2 cut(s) 383, 1332
LweI GCATC 2 cut(s) 1326, 1366
MaeI CTAG 3 cut(s) 305, 530, 755
MaeII ACGT 8 cut(s) 123, 288, 486, 723, 793, 1017, 1236, 1242
MalI GATC 6 cut(s) 82, 194, 842, 915, 1287, 1398
MboI GATC 6 cut(s) 80, 192, 840, 913, 1285, 1396
MboII GAAGA 8 cut(s) 131, 311, 344, 534, 563, 662, 1352, 1430
MflI RGATCY 1 cut(s) 80
MlsI TGGCCA 1 cut(s) 712
MluNI TGGCCA 1 cut(s) 712
MlyI GAGTC 2 cut(s) 530, 1482
MmeI TCCRAC 3 cut(s) 180, 423, 821
MnlI CCTC 5 cut(s) 216, 285, 526, 550, 1140
Mox20I TGGCCA 1 cut(s) 712
Mph1103I ATGCAT 3 cut(s) 186, 1409, 1434
MscI TGGCCA 1 cut(s) 712
Msp20I TGGCCA 1 cut(s) 712
MspI CCGG 3 cut(s) 63, 171, 1445
MspR9I CCNGG 1 cut(s) 1446
Mva1269I GAATGC 1 cut(s) 646
MwoI GCNNNNNNNGC 1 cut(s) 641
NciI CCSGG 1 cut(s) 1446
NdeII GATC 6 cut(s) 80, 192, 840, 913, 1285, 1396
NlaIII CATG 7 cut(s) 184, 764, 805, 952, 1177, 1207, 1463
NlaIV GGNNCC 1 cut(s) 825
NsiI ATGCAT 3 cut(s) 186, 1409, 1434
NspI RCATGY 4 cut(s) 184, 764, 1177, 1463
PaeI GCATGC 2 cut(s) 184, 764
PagI TCATGA 1 cut(s) 1203
PciSI GCTCTTC 1 cut(s) 1335
PctI GAATGC 1 cut(s) 646
PfeI GAWTC 2 cut(s) 248, 937
PkrI GCNGC 2 cut(s) 373, 1347
PleI GAGTC 2 cut(s) 530, 1482
PmaCI CACGTG 2 cut(s) 487, 1018
PmlI CACGTG 2 cut(s) 487, 1018
PpsI GAGTC 2 cut(s) 530, 1482
Ppu21I YACGTR 2 cut(s) 487, 1018
PpuMI RGGWCCY 1 cut(s) 855
PshBI ATTAAT 1 cut(s) 363
PsiI TTATAA 1 cut(s) 659
Psp5II RGGWCCY 1 cut(s) 855
PspCI CACGTG 2 cut(s) 487, 1018
PspN4I GGNNCC 1 cut(s) 825
PspPI GGNCC 1 cut(s) 855
PspPPI RGGWCCY 1 cut(s) 855
PstI CTGCAG 1 cut(s) 373
PsuI RGATCY 1 cut(s) 80
RsaI GTAC 4 cut(s) 351, 704, 814, 1172
RsaNI GTAC 4 cut(s) 350, 703, 813, 1171
SalI GTCGAC 1 cut(s) 1485
SapI GCTCTTC 1 cut(s) 1335
SatI GCNGC 2 cut(s) 372, 1346
Sau3AI GATC 6 cut(s) 80, 192, 840, 913, 1285, 1396
Sau96I GGNCC 1 cut(s) 855
SchI GAGTC 2 cut(s) 530, 1482
ScrFI CCNGG 1 cut(s) 1446
SfaNI GCATC 2 cut(s) 1326, 1366
SfcI CTRYAG 2 cut(s) 369, 1291
SinI GGWCC 1 cut(s) 855
SphI GCATGC 2 cut(s) 184, 764
SspI AATATT 3 cut(s) 105, 1079, 1226
SspMI CTAG 3 cut(s) 305, 530, 755
StyD4I CCNGG 1 cut(s) 1444
StyI CCWWGG 1 cut(s) 304
TaaI ACNGT 1 cut(s) 1278
TaiI ACGT 8 cut(s) 126, 291, 489, 726, 796, 1020, 1239, 1245
TaqI TCGA 4 cut(s) 843, 912, 962, 1486
TatI WGTACW 3 cut(s) 349, 812, 1170
TfiI GAWTC 2 cut(s) 248, 937
TscAI CASTG 2 cut(s) 58, 1275
TseI GCWGC 2 cut(s) 371, 1345
TspDTI ATGAA 6 cut(s) 244, 360, 405, 686, 1192, 1220
TspGWI ACGGA 1 cut(s) 1083
TspRI CASTG 2 cut(s) 58, 1275
VpaK11BI GGWCC 1 cut(s) 855
VspI ATTAAT 1 cut(s) 363
XapI RAATTY 5 cut(s) 5, 575, 958, 1214, 1384
XceI RCATGY 4 cut(s) 184, 764, 1177, 1463
XcmI CCANNNNNNNNNTGG 1 cut(s) 834
XmaJI CCTAGG 1 cut(s) 304
XmiI GTMKAC 2 cut(s) 1239, 1486
XspI CTAG 3 cut(s) 305, 530, 755
Zsp2I ATGCAT 3 cut(s) 186, 1409, 1434
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.