Rorug05G0396100

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
54339202 .. 54398844
59643 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0396100.1

Sequence Viewer

Length: 6444 bp
ATGGACTTTATTACTTCTATTGTCTCTGGAGTTATCGTAAAGATTGCTGAGACTACAGTTGTACCACTTTATCGCCAAGTGGGTTATGTTATTCACTACAAAAGCAACCTTCAAAATCTGAGGGATCAAGTGGAGAACCTAGGTTGTGCTAAAGACAGGATGCAACACACTCTTGATGATGAAGTCAAAAGAAAAGGTAAAAGAGTTGAACGTGATGTTGAGAACTGGCTCACAAAAGTGGATGAGATCACTCAAGAGGTTGATGTTTTCTTGCTAGATGAATGCCATGCAAAGACCAAGTGTTTCCATGGATTTTGTCCTAATCCAATTCTTCGATATCAGCTCAGCAGAAAATCAACAAAATTGGTGCAGAAGGTTGAATTCCATGAAAAGAGAGAATTTACCACTCTTTCATACAGTGTTCCCCCACAAGATGTATGCAGTATTCAATCCCGAGATTACCTAGCTTTTGAATCAAGGCTTTCGATTGTGAAAGATATCATGGAGAAACTGAGAAATCCGGATACCAACATGATTGGGGTGTATGGAATTGGTGGTGTGGGTAAGACCACACTGGCCAAAGAAGTCTATAGACAAGCTACAGAAGAGAAGTTATTTGATGATGTTATTATAGTACTAGATGTCAAACTGATTCCAGACTTGGAAGGCATTCAGAAGACAATTCTTGAAAAATTAGATATGGAGGTTGTTGATGGTCAAAGTATAGCTATAAGAGCGTCTCTTCTATGGGATAGGATAAAAGACAAGAGGGTTCTTATCATTTTAGACGATGTTCCAGAAAGAATTGATTTGGAGACTATGGGAGTTCTGAGTGTGCCAACTTGTAATCTAATGTTCACAGCTAGAGATCGAAGAGTTTTATGCTCTGAGATGCGTACACAAGAGGATTTTCGGCTTGACGTTTTGGGAGAAATAGAAACTTGGAATTTGTTTGAGAAGGTGGCTGGTGATATTGTTAAAGAAAACCCTATAAGAACCGTAGCCATAGAAGTTGCCAAGAAGTGTGGAGGTCTGCCAATTTTAGTGGTCAATGTTGCAAGTGCCTTGAGAGTTAGTACTTTACATGAGTGGAAGGATGCCTTGAGACGGTTAAAAAAGTTTGACATGAAAGAATTGGCAGAAAAAGCATGGTTAACTCTAGAGTGGAGTTACAATCAATTGAAGGGTGAAGAGCTTAAGCAACTATTCCTCCTTTGTGGAATTATTGCTTGGAGTGATAATAGGATAGATCTCAATGACTGCTTCAAATATAGTATGGGATTGGGTTTGTTGAAAAAAGTGGATACAATGGAAGAAGCACAAGTTGCATTTCATTCATTGATTAAAAAGCTTCAAAACTATTGTTTGTTGCCAGATCAGCAAGCCGTTATTGACAATACATTTGTCAGTATGCATGAGCTTGTCCGCAATGTTGCCAACATGATTGCACGCAGAGATCAACATGTCCTCGTAAGAGAATATGAAGAGCAGTTTGAAGAATGGCCAAATAAGGCTTTCTTTGAAAAGTGCACTATGATCTTTCTCCGTTCGTCCAATATTCCCACACTTCCTGAAGTCCCTTGGCAATGTCAAGAACTAAAACTGTTTGCCTTGGAAAGTAAGGATCAGTCGCTACAAATAGGGTCTAACTTTTTCGAAGGGATGAAAGAACTCAAAGTGTTAGATTTGTCCGGGTTTCCTGTGCCATCACTTCCTGCATCTCTTCAGTTCCTAACAAATCTTCAAACCTTGTGTTTAGACCAGTGCGTGTTGGGAGACATAGCCCTAGTTGGACAACTAAGAAGTTTGAAAATTCTTAGCTTGTTTGAATCAAAACTTACACAGTTGCCCGAAGAAATAGGGCAACTTTCCAATCTACAATTGTTGGATTTGACCGGTTGCTCAGAACTTGTACTGATTCCACCTAATGTTATAGCGAGCTTGAAAAGTCTTGAAGATTTGAGAATGGGAAGAAACAGCTTTAAGCAATGGGAGGCTGACGGAATCGTGGGTAGCAAAAGAAGAACAAATTCTAGCCTTTCAGAGCTGAAGCAGTTGTCTAAGCTAACCGCATTAGACATCCATATTCCGGATGCTAGAGTTCTTCCATCAGGCTTGTTCTTGCACTTGGAAAGATATCATGTATTCATCGGTGAAGAGTGGAAATGGCTTTCTTTTGATAATAGTTTCAACACGCTAAAGCTCAAGCTAGCAACAAGCAATCAATTGGACGGAGGTCTAGAGATGTTGGTGAAGAAATCTGAGCATTTGTACTTGGATGTAATGGAAGGTGTCAATGATATATTTCATCTATTAAATAGTGATGGTTATCAGCAACTGAAGCATCTCCAAGTCCAAAACAATGCTGAGATTAGATATGTCATCAATCAGAACGTCTTCCAGAAATTACAATCTTTGACATTGATGAATCTACCAAAGCTTGTTAGTTTCTCCTCCAACAGCAGAACAGTTGTTGCAATTACAACGACGAATGAGCAATTGAAGACTGATGGAGAGTGTAAAGAAATCATTTTGGAGAATGAGATCGGGAGTCCTGTGCAACTTTTCAAGAATGGAGAGATTGTGATGCCAAACTTAACAATCTTGATTGTGCATAAATGTGATGGTTTAAGATTCTTGCTATCATCTTCCATGGCTAAGAGTCTTGTACAACTCAAACATCTTGAGGTACACAACTGTCAAATAATGGAAGAGATTGTATCAACAAAAGAATCCGGTGAAGAAATGACTACAGATGACATCTTTTGTAAGCTGAACCATCTTCAACTACAACATCTACCACAACTCACAAGATTCTGCGTAGGAAATTATATTGAATTCCCGTCCTTGGAGATATTGCATTTAGAAGATTGTACTAAACTGGAGACTTTCATCTTTGATCATGCTATGATCAAAAGTGCAGAAACTGATTCAAAGGATAATCTTGAGACTCCTGGACCATATTTTTTGTTTGATGACAAGGTTGGATTTCCAAGGTTGGAGAGATTGATCATTTATGCCCTTCCTAAGTTGATAACAATATGGCACAACCAACTTCCTCAGGACTCTTTTTGCAGACTCAGAAAAGTTGACGTACAAAGATGCCACAATCTAATAAATATCTTTGCTGCTAGTATTATGAAAAGATTGAATGCTCTGGACACCTTACAGATATGTAATTGCAAGTCAATACAAGTGGTATTTGAACTTGGAGGAATCAATGTTGAGAGACATGATGACCCATCAACTACTCAGATGAGGATGTCTTATTGTCAAAATCTCGATCTAATAGAAATAGATTCATGTGAGAGTTTGAAGAATATCCTTCCAGTATCAGTGGCCAAGGGTCTTGAGCAACTAAGGAAGCTGAGTGTGACTAATTGTGATGGAGTGGAGGCAATTGTTGCAAAGGAAGGACAAGAAACCACCCCTAACTTAGTGTTCCCGAAAGCAACGTCTGTGACATTTTATAGTCTGCTCCAGATCAAGTGTTTCTATAATGGGAGGCACACTTCCAAGTGGCCGTTGCTCAAAGAATTATGGGTGAATGCATGCCCAAATGTGGATATATTTGCCTCGGAATTTTCAAGATTTCAGGAAAACCTTGGGTCTACACAGCCTTTTTTCTTAATTGAGAAGAATTCATTCCCCAATTTGGAATATTTGGGTTTGGGAGGCACGAAGTTGGAGATTTGGGATGGTCCACTGCCAGCGGAGTTGTTTACCAAGCTGAAGCATCTTGCCATTGCATCTTCACACTTCAAGTCATCAGATGCTTTTCTTCAAAAATTACACAACCAGCTTGAAATACTTGAGGTGGAGGAAACCTTTTTGGGGGAAATACATGCAGTTGGGACCCAGCTCCGACGTCTAAGATCTTTGAAGCTTTTTGGGGGAAAGCTTTCCATGTTGATGCATCTAGGGAAGGAGAACTCCCAACTAGTGGTTATTCCGAAGTTGGAAATTCTTGAAGTGGAGCATTGTGTCAGACTACAGAACCTGAGGTCATCTGCAATATCCTTTCAGAATCTAACCACTTTGAAAGTAAATGGTTGTCACGGACTGCAATATTTGACATCTTGTTCGATAGCTCAAAGTTTAGTCCAACTCACACACATGGAAGTTAAGGATTGTCAAAACCTTATGGAAATAGTGGCAGGCAACCAAGATGATGCAGGAAGTGAGATTGCATTCACCCGTCTACAACATTTGGAACTTTCTGCTCTACCAAGTCTCCAAAGATTCTGCTGTGGAAATTGCCTAGTTAAAGTCCCATCCTTGGATACATTAGTCGTGGCTGACTGCCTGGTCAAGTTGAGCATTTCTCCTGATCGGGTACTCCTAACTGATTTTAACCCAGAAAGGTTTCTTCAGAATTTTAATAATCTTGATAACCTTGTGCTGCATGGTGATCACAAAGAGATATTTTTCCATGAAGAAAATAGTGGCGATGAAATACATGCAGTTGTGACCCTCCCGCATTTAACATCTTTGAAACTTTCAGAAATGAACATGCTAATGCATCTAGGGAAGGAGAACTCCCAACCAATTATTCCAAATTTGGAAATTCTAGAGGTGTCACTCTGTGGGAAATTAAAGAATCTAAGCTCACCAGCAATATCCTTTCAGAATCTCAAAACTCTGAAAGCAATTGGTTGTCAAGGGCTGGAATATTTGATAACTAGCTCGATTGCCCGGAGTCTAATGCAACTCACACATTTGGAAGTTAAGGATTGTGAAAGACTGGTGCAAATAGTGGGAAGCAGCAGCGAAGATGAGGCAAGAAATGAGATTGCTTTTAACAAGTTGGAGCATTTGGAACTTTCAGGATTGCCCAGTTTGCAATGTTTTTTCTCGGGTGCCATGCTTTCTCATCAATTTACAATTTGCGATGAAATTGAAGAGAGTGGTGATACGAAGGAGAATCTTGATGGTGCTGTACAATACTTTCTATTTGACAAAAAGGTGGGATTACCTAGATTGGAAACACTGATCGTCCATGACCTACATAAGTTGATGAGAATATGGCACGAACAACTTGCTCCAGACTCCTTTTGTAGACTCAAAACAGTTGATGTTCAGAGATGCAGCAGTCTAATAAATATCTTTGGGGCCAGTATTCTGGGAAGATTGAATGCTCTCGACACTTTAAAGCTAAGGCAGTGCCAGTCGCTACGACTGGTATTCGAACACGTAGGAATCAATGCTGAAGAAGAAGATGATACATCAATCACTCCGTCCAAATTGCCTGAATACTGTCAGAATTTGGTTTCAGTGAAAATAGATTCCTGTGAGAGTTTGAGGAATATCTTTCCAGCCTCAGTAGCCAGAGGTCTTCAGCAGCTGAGGAAGCTGAGTGTAGAGAATTGCGTTAGAGTGGAGGACATTGTTGCGATGGAAGGACTGGGAATGACAACACCTGAGTTTGTGTTCCCAAACGCAACATCTGTGATATTTCAAAATCTGCCACGACTTTCAAGTTTTTATCCAGGGATGCACGCTTCCGTGTGGCCTCTACTCAAGGAGTTGAGAGTGATGTCCTGTGACAATGTGGAGATTTTTGCCCTGTGCTTTGTGGGTACAGCTATCAGGCAACCTTTGTTTCTAATCGAGAAGGGTTCATTCTCCAACTTGGAAATATTGCACTTTTACTCAAAGGTCGGTACAATGAAGAATTGGTGGAGTCGACTCCCAGCAGAGTTCTTCAGCAAATTAAATTCTCTTGGGTCTCAATCTGCTGTGTTTCAATCTGGTTTCCTTCAGAATTTACCTCATCTTGAATACCTTACGCTTTATGGTTTTGAGAAAGAAGTATTTGTCCATGAAGGAATTAGTAGTGGGCAAATTCAGGCAGTTGGAACACTACTCCCGCACTTAAAAAGTTTGTGGGTATTTGATATGCCCGAGCTGATGCATCTAGGGAAGGAAAACTGCCAATCAGTTATTCCAAATTTGGAGTTTCTGGATGTGTGGAAGTGTGAAAAATTAAAGAATCTAAGGTCATCCGCAATATCCTTTCAGAATCTAAAAACTTTGAAAGTCGAGAAATGCCACGGTCTGGAATATTTGACAACTTACTCAATAGCCCAAAGCTTAACGCAACTCGAAGAGATGGAAGTTAAGGATTGTGAAGGACTGATAGAGATAGTGGCTAGCAATCAAGATGATGATGATGCAGTAAATGAGATTTTATTCATGAGATTACAACGTTTGGAACTTTCTGGTCTACCAAGTCTGCAATGCTTTTGCTCTGGAAAGTGCATTGTTAATATCCCATTCTTGGACACTTTGACCGTTACTGAATGCCTGATTGAGTTGAAGATTTCTCCTGAAAAGGTACTCCTGAGCAATTCAAAACCGGAAAGGTTGAAGTTAATAGAGGAAGAGGCAAAAGATCATGACAAACCGGAAGGGTCGGATACGACTGGAACTCAAGCTACATAA

Protein Analysis

2147

Amino Acids

243.55

Weight (kDa)

5.55

Isoelectric Point (pI)

41.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 164 - 323 1.3e-24 NB-ARC domain
LRR_14 PF23598 522 - 809 7.1e-12 Leucine-rich repeat region
LRR_RPS2 PF23247 862 - 967 2.8e-15 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 998 - 1062 4.1e-13 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1087 - 1129 2.5e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1334 - 1435 2.2e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1535 - 1618 1.1e-09 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1662 - 1739 3.3e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1753 - 1790 3.3e-10 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1889 - 2001 3.7e-07 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1999 - 2102 4.3e-14 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 4307
AatII GACGTC 1 cut(s) 3871
AccB1I GGYRCC 1 cut(s) 4859
AccB7I CCANNNNNTGG 2 cut(s) 3943, 6058
AccI GTMKAC 5 cut(s) 3611, 4201, 5059, 5686, 6226
AccIII TCCGGA 2 cut(s) 520, 2089
AciI CCGC 6 cut(s) 1426, 2070, 3713, 4478, 5870, 6006
AclI AACGTT 1 cut(s) 6208
AclWI GGATC 2 cut(s) 132, 1632
AcoI YGGCCR 4 cut(s) 576, 1502, 3339, 3521
AcyI GRCGYC 1 cut(s) 3868
AdeI CACNNNGTG 1 cut(s) 4586
AflII CTTAAG 1 cut(s) 1196
AflIII ACRYGT 2 cut(s) 1462, 5191
AgeI ACCGGT 1 cut(s) 1895
AhlI ACTAGT 1 cut(s) 3940
AjnI CCWGG 3 cut(s) 2953, 4305, 5488
AjuI GAANNNNNNNTTGG 6 cut(s) 1213, 1245, 4536, 4568, 5928, 5960
AleI CACNNNNGTG 1 cut(s) 236
Alw21I GWGCWC 1 cut(s) 1532
Alw44I GTGCAC 1 cut(s) 1528
AlwI GGATC 2 cut(s) 132, 1632
AlwNI CAGNNNCTG 4 cut(s) 2338, 2927, 4000, 5344
Ama87I CYCGRG 3 cut(s) 453, 4855, 5903
Aor13HI TCCGGA 2 cut(s) 520, 2089
AoxI GGCC 6 cut(s) 576, 1502, 3339, 3521, 5112, 5510
ApaLI GTGCAC 1 cut(s) 1528
ApeKI GCWGC 6 cut(s) 3128, 4402, 4764, 4767, 5088, 5341
ArsI GACNNNNNNTTYG 6 cut(s) 1385, 1417, 3440, 3472, 4066, 4098
AsiGI ACCGGT 1 cut(s) 1895
Asp700I GAANNNNTTC 6 cut(s) 669, 2029, 2396, 3644, 3901, 4365
AspA2I CCTAGG 1 cut(s) 139
AspS9I GGNCC 4 cut(s) 2957, 3701, 3855, 5112
AsuC2I CCSGG 2 cut(s) 1693, 4696
AsuII TTCGAA 2 cut(s) 1656, 5187
AsuNHI GCTAGC 2 cut(s) 2209, 6152
AvaI CYCGRG 3 cut(s) 453, 4855, 5903
AvaII GGWCC 3 cut(s) 2957, 3701, 3855
AvrII CCTAGG 1 cut(s) 139
AxyI CCTNAGG 2 cut(s) 3060, 4001
BaeGI GKGCMC 1 cut(s) 1532
BaeI ACNNNNGTAYC 4 cut(s) 45, 78, 4275, 4308
BalI TGGCCA 3 cut(s) 578, 1504, 3341
BanI GGYRCC 1 cut(s) 4859
BbsI GAAGAC 4 cut(s) 683, 2389, 2510, 5327
Bbv12I GWGCWC 1 cut(s) 1532
BbvCI CCTCAGC 1 cut(s) 5345
BbvI GCAGC 6 cut(s) 3115, 4389, 4776, 4779, 5100, 5353
BceAI ACGGC 2 cut(s) 1370, 3508
BcgI CGANNNNNNTGC 2 cut(s) 5021, 5055
BciT130I CCWGG 3 cut(s) 2955, 4307, 5490
BciVI GTATCC 4 cut(s) 517, 1297, 4276, 6412
BclI TGATCA 4 cut(s) 2899, 2910, 3009, 4411
BcnI CCSGG 2 cut(s) 1693, 4696
BcuI ACTAGT 1 cut(s) 3940
BfmI CTRYAG 5 cut(s) 54, 589, 600, 2751, 3992
BfrI CTTAAG 1 cut(s) 1196
BfuI GTATCC 4 cut(s) 517, 1297, 4276, 6412
BglII AGATCT 2 cut(s) 1249, 3875
BisI GCNGC 6 cut(s) 3129, 4403, 4765, 4768, 5089, 5342
BlnI CCTAGG 1 cut(s) 139
BlpI GCTNAGC 1 cut(s) 344
BlsI GCNGC 6 cut(s) 3130, 4404, 4766, 4769, 5090, 5343
BmcAI AGTACT 2 cut(s) 636, 1078
Bme1390I CCNGG 5 cut(s) 1693, 2955, 4307, 4696, 5490
Bme18I GGWCC 3 cut(s) 2957, 3701, 3855
BmeT110I CYCGRG 3 cut(s) 453, 4855, 5903
BmgT120I GGNCC 4 cut(s) 2957, 3701, 3855, 5112
BmiI GGNNCC 4 cut(s) 3856, 3857, 4861, 5113
BmrFI CCNGG 5 cut(s) 1693, 2955, 4307, 4696, 5490
BmrI ACTGGG 2 cut(s) 4830, 5414
BmtI GCTAGC 2 cut(s) 2213, 6156
BmuI ACTGGG 2 cut(s) 4830, 5414
BoxI GACNNNNGTC 1 cut(s) 2235
BpiI GAAGAC 4 cut(s) 683, 2389, 2510, 5327
BplI GAGNNNNNCTC 2 cut(s) 4309, 4341
BpmI CTGGAG 4 cut(s) 48, 2903, 3464, 5028
Bpu10I CCTNAGC 3 cut(s) 5156, 5345, 6344
Bpu1102I GCTNAGC 1 cut(s) 344
Bpu14I TTCGAA 2 cut(s) 1656, 5187
BpuMI CCSGG 2 cut(s) 1693, 4696
BsaAI YACGTR 1 cut(s) 5194
BsaBI GATNNNNATC 1 cut(s) 2328
BsaHI GRCGYC 1 cut(s) 3868
BsaI GGTCTC 1 cut(s) 5733
BsaWI WCCGGW 6 cut(s) 520, 1895, 2089, 2735, 6358, 6406
BsaXI ACNNNNNCTCC 8 cut(s) 21, 51, 1194, 1224, 2568, 2598, 4218, 4248
Bse118I RCCGGY 1 cut(s) 1895
Bse21I CCTNAGG 2 cut(s) 3060, 4001
Bse3DI GCAATG 6 cut(s) 1435, 1592, 1994, 3744, 4850, 6245
Bse8I GATNNNNATC 1 cut(s) 2328
BseAI TCCGGA 2 cut(s) 520, 2089
BseBI CCWGG 3 cut(s) 2955, 4307, 5490
BseJI GATNNNNATC 1 cut(s) 2328
BseMI GCAATG 6 cut(s) 1435, 1592, 1994, 3744, 4850, 6245
BseRI GAGGAG 1 cut(s) 2443
BseSI GKGCMC 1 cut(s) 1532
BseXI GCAGC 6 cut(s) 3115, 4389, 4776, 4779, 5100, 5353
BseYI CCCAGC 2 cut(s) 3858, 5692
BsgI GTGCAG 2 cut(s) 389, 2940
BshFI GGCC 6 cut(s) 578, 1504, 3341, 3523, 5114, 5512
BshNI GGYRCC 1 cut(s) 4859
BshTI ACCGGT 1 cut(s) 1895
BsiHKAI GWGCWC 1 cut(s) 1532
BsiHKCI CYCGRG 3 cut(s) 453, 4855, 5903
BsiSI CCGG 8 cut(s) 521, 1692, 1896, 2090, 2736, 4696, 6359, 6407
BslFI GGGAC 3 cut(s) 1562, 3868, 4256
BsmBI CGTCTC 2 cut(s) 744, 1099
BsmFI GGGAC 3 cut(s) 1562, 3868, 4256
BsmI GAATGC 7 cut(s) 287, 669, 3157, 3553, 4190, 5140, 6308
BsnI GGCC 6 cut(s) 578, 1504, 3341, 3523, 5114, 5512
Bso31I GGTCTC 1 cut(s) 5733
BsoBI CYCGRG 3 cut(s) 453, 4855, 5903
Bsp119I TTCGAA 2 cut(s) 1656, 5187
Bsp1286I GDGCHC 1 cut(s) 1532
Bsp13I TCCGGA 2 cut(s) 520, 2089
Bsp1407I TGTACA 2 cut(s) 2668, 4939
Bsp1720I GCTNAGC 1 cut(s) 344
Bsp19I CCATGG 2 cut(s) 307, 2652
BspACI CCGC 6 cut(s) 1426, 2070, 3713, 4478, 5870, 6006
BspANI GGCC 6 cut(s) 578, 1504, 3341, 3523, 5114, 5512
BspEI TCCGGA 2 cut(s) 520, 2089
BspHI TCATGA 2 cut(s) 6195, 6397
BspLI GGNNCC 4 cut(s) 3856, 3857, 4861, 5113
BspOI GCTAGC 2 cut(s) 2213, 6156
BspPI GGATC 2 cut(s) 132, 1632
BspQI GCTCTTC 2 cut(s) 1185, 1479
BspT104I TTCGAA 2 cut(s) 1656, 5187
BspT107I GGYRCC 1 cut(s) 4859
BspTI CTTAAG 1 cut(s) 1196
BspTNI GGTCTC 1 cut(s) 5733
BsrDI GCAATG 6 cut(s) 1435, 1592, 1994, 3744, 4850, 6245
BsrFI RCCGGY 1 cut(s) 1895
BsrGI TGTACA 2 cut(s) 2668, 4939
BssAI RCCGGY 1 cut(s) 1895
BssNI GRCGYC 1 cut(s) 3868
Bst2UI CCWGG 3 cut(s) 2955, 4307, 5490
BstACI GRCGYC 1 cut(s) 3868
BstAFI CTTAAG 1 cut(s) 1196
BstAPI GCANNNNNTGC 2 cut(s) 1325, 3404
BstAUI TGTACA 2 cut(s) 2668, 4939
BstBAI YACGTR 1 cut(s) 5194
BstBI TTCGAA 2 cut(s) 1656, 5187
BstC8I GCNNGC 9 cut(s) 1383, 1450, 1939, 2211, 3553, 3711, 4159, 5499, 6154
BstDSI CCRYGG 3 cut(s) 307, 2652, 6052
BstMWI GCNNNNNNNGC 9 cut(s) 734, 1145, 1325, 1378, 2341, 3404, 4840, 5324, 5350
BstNI CCWGG 3 cut(s) 2955, 4307, 5490
BstNSI RCATGY 5 cut(s) 1466, 3555, 3848, 4463, 4516
BstPAI GACNNNNGTC 1 cut(s) 2235
BstSCI CCNGG 5 cut(s) 1691, 2953, 4305, 4694, 5488
BstSFI CTRYAG 5 cut(s) 54, 589, 600, 2751, 3992
BstSLI GKGCMC 1 cut(s) 1532
BstV1I GCAGC 6 cut(s) 3115, 4389, 4776, 4779, 5100, 5353
BstV2I GAAGAC 4 cut(s) 683, 2389, 2510, 5327
BstX2I RGATCY 2 cut(s) 1249, 3875
BstXI CCANNNNNNTGG 1 cut(s) 5122
BstYI RGATCY 2 cut(s) 1249, 3875
Bsu36I CCTNAGG 2 cut(s) 3060, 4001
BsuI GTATCC 4 cut(s) 517, 1297, 4276, 6412
BsuRI GGCC 6 cut(s) 578, 1504, 3341, 3523, 5114, 5512
BtgI CCRYGG 3 cut(s) 307, 2652, 6052
BtgZI GCGATG 3 cut(s) 4464, 4905, 5408
BtsI GCAGTG 2 cut(s) 3704, 5168
BtsIMutI CAGTG 8 cut(s) 424, 572, 1769, 3342, 3704, 4988, 5168, 5280
Cac8I GCNNGC 9 cut(s) 1383, 1450, 1939, 2211, 3553, 3711, 4159, 5499, 6154
CaiI CAGNNNCTG 4 cut(s) 2338, 2927, 4000, 5344
CciI TCATGA 2 cut(s) 6195, 6397
Cfr10I RCCGGY 1 cut(s) 1895
Cfr13I GGNCC 4 cut(s) 2957, 3701, 3855, 5112
CseI GACGC 1 cut(s) 726
CspAI ACCGGT 1 cut(s) 1895
CspCI CAANNNNNGTGG 6 cut(s) 1006, 1026, 1041, 1061, 3177, 3212
DraI TTTAAA 1 cut(s) 5151
DraIII CACNNNGTG 1 cut(s) 4586
DrdI GACNNNNNNGTC 1 cut(s) 4307
DseDI GACNNNNNNGTC 1 cut(s) 4307
EaeI YGGCCR 4 cut(s) 576, 1502, 3339, 3521
Eco31I GGTCTC 1 cut(s) 5733
Eco32I GATATC 3 cut(s) 338, 499, 2138
Eco47I GGWCC 3 cut(s) 2957, 3701, 3855
Eco81I CCTNAGG 2 cut(s) 3060, 4001
Eco88I CYCGRG 3 cut(s) 453, 4855, 5903
EcoO109I RGGNCCY 1 cut(s) 3855
EcoRI GAATTC 3 cut(s) 380, 2837, 3640
EcoRII CCWGG 3 cut(s) 2953, 4305, 5488
EcoRV GATATC 3 cut(s) 338, 499, 2138
EcoT22I ATGCAT 5 cut(s) 1416, 3553, 3918, 4524, 5916
Esp3I CGTCTC 2 cut(s) 744, 1099
FalI AAGNNNNNCTT 4 cut(s) 1085, 1117, 1502, 1534
FaqI GGGAC 3 cut(s) 1562, 3868, 4256
FauI CCCGC 2 cut(s) 4485, 5877
FbaI TGATCA 4 cut(s) 2899, 2910, 3009, 4411
FblI GTMKAC 5 cut(s) 3611, 4201, 5059, 5686, 6226
Fnu4HI GCNGC 6 cut(s) 3129, 4403, 4765, 4768, 5089, 5342
Fsp4HI GCNGC 6 cut(s) 3129, 4403, 4765, 4768, 5089, 5342
GluI GCNGC 6 cut(s) 3129, 4403, 4765, 4768, 5089, 5342
GsaI CCCAGC 2 cut(s) 3862, 5696
GsuI CTGGAG 4 cut(s) 48, 2903, 3464, 5028
HaeIII GGCC 6 cut(s) 578, 1504, 3341, 3523, 5114, 5512
HapII CCGG 8 cut(s) 521, 1692, 1896, 2090, 2736, 4696, 6359, 6407
HgaI GACGC 1 cut(s) 726
Hin1I GRCGYC 1 cut(s) 3868
HincII GTYRAC 3 cut(s) 1155, 3091, 5687
HindII GTYRAC 3 cut(s) 1155, 3091, 5687
HindIII AAGCTT 5 cut(s) 1349, 2438, 3884, 3899, 6091
HpaI GTTAAC 1 cut(s) 1155
HpaII CCGG 8 cut(s) 521, 1692, 1896, 2090, 2736, 4696, 6359, 6407
Hpy99I CGWCG 2 cut(s) 2491, 3870
HpyCH4IV ACGT 8 cut(s) 211, 921, 2394, 3093, 3455, 3868, 5193, 6208
HpyF10VI GCNNNNNNNGC 9 cut(s) 734, 1145, 1325, 1378, 2341, 3404, 4840, 5324, 5350
HpySE526I ACGT 8 cut(s) 211, 921, 2394, 3093, 3455, 3868, 5193, 6208
Hsp92I GRCGYC 1 cut(s) 3868
KflI GGGWCCC 1 cut(s) 3855
Kpn2I TCCGGA 2 cut(s) 520, 2089
Ksp22I TGATCA 4 cut(s) 2899, 2910, 3009, 4411
KspAI GTTAAC 1 cut(s) 1155
LguI GCTCTTC 2 cut(s) 1185, 1479
LmnI GCTCC 5 cut(s) 3483, 3867, 3976, 4810, 5047
Lsp1109I GCAGC 6 cut(s) 3115, 4389, 4776, 4779, 5100, 5353
MaeII ACGT 8 cut(s) 211, 921, 2394, 3093, 3455, 3868, 5193, 6208
MaeIII GTNAC 8 cut(s) 1169, 3373, 3460, 4055, 4468, 4578, 5543, 6295
MfeI CAATTG 6 cut(s) 1178, 1880, 2225, 2498, 3399, 4650
MflI RGATCY 2 cut(s) 1249, 3875
MhlI GDGCHC 1 cut(s) 1532
MlsI TGGCCA 3 cut(s) 578, 1504, 3341
MluNI TGGCCA 3 cut(s) 578, 1504, 3341
Mox20I TGGCCA 3 cut(s) 578, 1504, 3341
Mph1103I ATGCAT 5 cut(s) 1416, 3553, 3918, 4524, 5916
MroI TCCGGA 2 cut(s) 520, 2089
MroXI GAANNNNTTC 6 cut(s) 669, 2029, 2396, 3644, 3901, 4365
MscI TGGCCA 3 cut(s) 578, 1504, 3341
MslI CAYNNNNRTG 5 cut(s) 236, 2619, 3911, 4115, 4517
Msp20I TGGCCA 3 cut(s) 578, 1504, 3341
MspA1I CMGCKG 2 cut(s) 3713, 5344
MspCI CTTAAG 1 cut(s) 1196
MspI CCGG 8 cut(s) 521, 1692, 1896, 2090, 2736, 4696, 6359, 6407
MspR9I CCNGG 5 cut(s) 1693, 2955, 4307, 4696, 5490
MunI CAATTG 6 cut(s) 1178, 1880, 2225, 2498, 3399, 4650
Mva1269I GAATGC 7 cut(s) 287, 669, 3157, 3553, 4190, 5140, 6308
MvaI CCWGG 3 cut(s) 2955, 4307, 5490
MwoI GCNNNNNNNGC 9 cut(s) 734, 1145, 1325, 1378, 2341, 3404, 4840, 5324, 5350
NciI CCSGG 2 cut(s) 1693, 4696
NcoI CCATGG 2 cut(s) 307, 2652
NheI GCTAGC 2 cut(s) 2209, 6152
NlaIV GGNNCC 4 cut(s) 3856, 3857, 4861, 5113
NmuCI GTSAC 6 cut(s) 3373, 3460, 4055, 4468, 4578, 5543
NsiI ATGCAT 5 cut(s) 1416, 3553, 3918, 4524, 5916
NspI RCATGY 5 cut(s) 1466, 3555, 3848, 4463, 4516
NspV TTCGAA 2 cut(s) 1656, 5187
OliI CACNNNNGTG 1 cut(s) 236
PaeI GCATGC 1 cut(s) 3555
PagI TCATGA 2 cut(s) 6195, 6397
PciI ACATGT 1 cut(s) 1462
PciSI GCTCTTC 2 cut(s) 1185, 1479
PctI GAATGC 7 cut(s) 287, 669, 3157, 3553, 4190, 5140, 6308
PdmI GAANNNNTTC 6 cut(s) 669, 2029, 2396, 3644, 3901, 4365
PflMI CCANNNNNTGG 2 cut(s) 3943, 6058
PfoI TCCNGGA 1 cut(s) 2953
PinAI ACCGGT 1 cut(s) 1895
PkrI GCNGC 6 cut(s) 3130, 4404, 4766, 4769, 5090, 5343
Ppu21I YACGTR 1 cut(s) 5194
PpuMI RGGWCCY 1 cut(s) 3855
PscI ACATGT 1 cut(s) 1462
PshAI GACNNNNGTC 1 cut(s) 2235
Psp1406I AACGTT 1 cut(s) 6208
Psp5II RGGWCCY 1 cut(s) 3855
Psp6I CCWGG 3 cut(s) 2953, 4305, 5488
PspFI CCCAGC 2 cut(s) 3858, 5692
PspGI CCWGG 3 cut(s) 2953, 4305, 5488
PspN4I GGNNCC 4 cut(s) 3856, 3857, 4861, 5113
PspPI GGNCC 4 cut(s) 2957, 3701, 3855, 5112
PspPPI RGGWCCY 1 cut(s) 3855
PsrI GAACNNNNNNTAC 1 cut(s) 6421
PstNI CAGNNNCTG 4 cut(s) 2338, 2927, 4000, 5344
PsuI RGATCY 2 cut(s) 1249, 3875
PvuII CAGCTG 1 cut(s) 5344
RseI CAYNNNNRTG 5 cut(s) 236, 2619, 3911, 4115, 4517
SalI GTCGAC 1 cut(s) 5685
SapI GCTCTTC 2 cut(s) 1185, 1479
SatI GCNGC 6 cut(s) 3129, 4403, 4765, 4768, 5089, 5342
Sau96I GGNCC 4 cut(s) 2957, 3701, 3855, 5112
ScaI AGTACT 2 cut(s) 636, 1078
ScrFI CCNGG 5 cut(s) 1693, 2955, 4307, 4696, 5490
SduI GDGCHC 1 cut(s) 1532
SfcI CTRYAG 5 cut(s) 54, 589, 600, 2751, 3992
SfuI TTCGAA 2 cut(s) 1656, 5187
SinI GGWCC 3 cut(s) 2957, 3701, 3855
SmiMI CAYNNNNRTG 5 cut(s) 236, 2619, 3911, 4115, 4517
SpeI ACTAGT 1 cut(s) 3940
SphI GCATGC 1 cut(s) 3555
SsiI CCGC 6 cut(s) 1426, 2070, 3713, 4478, 5870, 6006
SspI AATATT 6 cut(s) 1558, 3662, 4070, 4673, 5640, 6065
StyD4I CCNGG 5 cut(s) 1691, 2953, 4305, 4694, 5488
TaiI ACGT 8 cut(s) 214, 924, 2397, 3096, 3458, 3871, 5196, 6211
TatI WGTACW 7 cut(s) 634, 1076, 1912, 2271, 2668, 2873, 4939
TscAI CASTG 8 cut(s) 424, 579, 1769, 3342, 3711, 4995, 5168, 5280
TseFI GTSAC 6 cut(s) 3373, 3460, 4055, 4468, 4578, 5543
TseI GCWGC 6 cut(s) 3128, 4402, 4764, 4767, 5088, 5341
Tsp45I GTSAC 6 cut(s) 3373, 3460, 4055, 4468, 4578, 5543
TspGWI ACGGA 6 cut(s) 1535, 2016, 2247, 4074, 5226, 5494
TspRI CASTG 8 cut(s) 424, 579, 1769, 3342, 3711, 4995, 5168, 5280
Van91I CCANNNNNTGG 2 cut(s) 3943, 6058
Vha464I CTTAAG 1 cut(s) 1196
VneI GTGCAC 1 cut(s) 1528
VpaK11BI GGWCC 3 cut(s) 2957, 3701, 3855
XbaI TCTAGA 3 cut(s) 1159, 2239, 4570
XceI RCATGY 5 cut(s) 1466, 3555, 3848, 4463, 4516
XmaJI CCTAGG 1 cut(s) 139
XmiI GTMKAC 5 cut(s) 3611, 4201, 5059, 5686, 6226
XmnI GAANNNNTTC 6 cut(s) 669, 2029, 2396, 3644, 3901, 4365
ZraI GACGTC 1 cut(s) 3869
ZrmI AGTACT 2 cut(s) 636, 1078
Zsp2I ATGCAT 5 cut(s) 1416, 3553, 3918, 4524, 5916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.