Rh6BG086900

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
13568075 .. 13572915
4841 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG086900.1

Sequence Viewer

Length: 1485 bp
ATGGAATTTGAGAGCATTATAGGAAACCTGGAGAACAAGACTATCTTAATTACTGGAGCTACTGGTTTTGTCGGAAAGGTGTTGGTGGAGAAAATACTAAGAGTTCAGCCAAACGTGAAAAAGTTGTATCTTCTTTTAAGAGCTTCTGATGCCAATTCTGCCACACATCGCATGCATAATGAGATCACAGGAAAAGAGTTGTTCAAGATTGTAAGGGAGAAATGGGCAGCAAATTTTGATTCCTTCATATCAGAAAAGGTTGTTGCTCTCTCAGGAGACGTAACTTTGAAAGATCTAGGAGTGAAGGAAATCAAAGTAAAGGAAGAACTGTTCAATGGGATACAGATAATAATTAATTCTGCAGCAAACACAAAGTGGGATGAAAGGTATGATGTTGCACTGGAAGTGAATACATTTGGAGTTTTGAATATGTTAGACTTTGCAAAGAAATGCTTAAATCTGGAGATGGTTGTTCACATGTCAACAGCTTATGTGTCTGGTGATAGGGCAGGGCTGATACTAGAGGACTCATCTTCAATGGATGAGATGGCAAGAAAAACTACTCATGATGTTGACTTGAAAGAACATGAAAAGAAGATGGTGGAGTGCAAACTAAAAGAACTACAAGCACAAGACGTTTCCGAAGAAGTTATTACAAATACAATGAAAGACTTTGGCACCTCAAGGGCTAAGTTGTATGGATGGGAAAATACCTATTTGTTAACAAAGGTAATGGGAGAAATGTATCTAGGACACTCAAAAGGTAACCTATCTGTTGCTGTTATACGTCCAACTATGATTACCAGCACTTACAAGGAGCCATTTTCTGGCTGGATTGAAGGTTTCAGACTATATGATAGCCTAATTGGCAGTTATTGGAAAGGGAAGCTTACATGTATACCTGTCGATCCTATGTCAGTAGTAGATGTGATTCCGGTTGACATGGTGGTAAATTCAATTATTACAGCAATGGTAGTCAATGCAAATACATCTCGTAAAATAATTTACCATGTTGGAACCTCATTGCGGAATCCTCTTAAATTCTCTGATTTTAACAAATTTATGTTCCAATACTGCACAAAAAATCCATGGATTTACAATGATGGAAGGCCTGTCAAGGTTGGCAAGTTGAAAACGGTTACAACCATGGCCGCTTTTCGCTGGTACATGCAACCATTGAAGGGATTAAAGTCCTTGAATAAAGAATTTGACCAATGTTTCCGAGATGTATGCCTTAACGATGACTGGAAAGACAAATCGGTAATACGGTTGATTGAGTTGTACGAACGAATTTTGCTATTCAAGGGAATCTTTGACGACACCAATTCAGAGGAATTGCGAAGGATAGCAAATTGGAGCTACATTGATGCAGAAAATTTTAATTTCAATCCAAAATGTATTGACTGGGAAGATTACTATATCCATAGTCACATTCCTGGCCTTGCGAAGAATGTTATTTTCAAACACAGTCAAAGCCGGCTTTGA

Protein Analysis

494

Amino Acids

56.65

Weight (kDa)

7.98

Isoelectric Point (pI)

28.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Epimerase PF01370 15 - 175 2.5e-09 NAD dependent epimerase/dehydratase family
NAD_binding_4 PF07993 17 - 320 8.8e-70 Male sterility protein
Sterile PF03015 420 - 484 8.6e-09 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 677
AccB7I CCANNNNNTGG 1 cut(s) 827
AccI GTMKAC 1 cut(s) 898
AciI CCGC 2 cut(s) 1027, 1152
AclWI GGATC 1 cut(s) 902
AcoI YGGCCR 1 cut(s) 1149
AcsI RAATTY 8 cut(s) 5, 232, 952, 1040, 1058, 1205, 1290, 1375
AdeI CACNNNGTG 1 cut(s) 375
AfaI GTAC 2 cut(s) 1166, 1283
AfiI CCNNNNNNNGG 3 cut(s) 827, 1026, 1181
AflIII ACRYGT 2 cut(s) 477, 893
AjnI CCWGG 2 cut(s) 27, 1435
AloI GAACNNNNNNTCC 2 cut(s) 314, 346
AluBI AGCT 5 cut(s) 59, 143, 488, 889, 1359
AluI AGCT 5 cut(s) 59, 143, 488, 889, 1359
Alw26I GTCTC 1 cut(s) 270
AlwI GGATC 1 cut(s) 902
AoxI GGCC 3 cut(s) 1109, 1149, 1438
ApeKI GCWGC 2 cut(s) 227, 362
ApoI RAATTY 8 cut(s) 5, 232, 952, 1040, 1058, 1205, 1290, 1375
AseI ATTAAT 1 cut(s) 354
AsuHPI GGTGA 1 cut(s) 512
BanI GGYRCC 1 cut(s) 677
BbvI GCAGC 2 cut(s) 239, 374
BccI CCATC 5 cut(s) 460, 541, 592, 696, 1097
BcgI CGANNNNNNTGC 2 cut(s) 1212, 1246
BciT130I CCWGG 2 cut(s) 29, 1437
BciVI GTATCC 1 cut(s) 333
BcoDI GTCTC 1 cut(s) 270
BfaI CTAG 3 cut(s) 296, 521, 749
BfmI CTRYAG 1 cut(s) 360
BfuI GTATCC 1 cut(s) 333
BglI GCCNNNNNGGC 1 cut(s) 867
BglII AGATCT 1 cut(s) 292
BisI GCNGC 3 cut(s) 228, 363, 1152
BlsI GCNGC 3 cut(s) 229, 364, 1153
Bme1390I CCNGG 2 cut(s) 29, 1437
BmiI GGNNCC 3 cut(s) 679, 819, 1018
BmrFI CCNGG 2 cut(s) 29, 1437
BmrI ACTGGG 1 cut(s) 1414
BmsI GCATC 2 cut(s) 139, 1357
BmuI ACTGGG 1 cut(s) 1414
BpmI CTGGAG 3 cut(s) 50, 75, 482
BpuEI CTTGAG 1 cut(s) 667
BsaJI CCNNGG 2 cut(s) 1088, 1146
BsaWI WCCGGW 1 cut(s) 934
Bsc4I CCNNNNNNNGG 3 cut(s) 827, 1026, 1181
Bse118I RCCGGY 1 cut(s) 1476
Bse1I ACTGG 5 cut(s) 58, 67, 405, 1250, 1409
Bse3DI GCAATG 2 cut(s) 975, 1022
BseBI CCWGG 2 cut(s) 29, 1437
BseDI CCNNGG 2 cut(s) 1088, 1146
BseGI GGATG 3 cut(s) 385, 547, 707
BseLI CCNNNNNNNGG 3 cut(s) 827, 1026, 1181
BseMI GCAATG 2 cut(s) 975, 1022
BseMII CTCAG 1 cut(s) 285
BseNI ACTGG 5 cut(s) 58, 67, 405, 1250, 1409
BseXI GCAGC 2 cut(s) 239, 374
BsgI GTGCAG 1 cut(s) 1060
BshFI GGCC 3 cut(s) 1111, 1151, 1440
BshNI GGYRCC 1 cut(s) 677
BsiSI CCGG 2 cut(s) 935, 1477
BslI CCNNNNNNNGG 3 cut(s) 827, 1026, 1181
BsmAI GTCTC 1 cut(s) 270
BsmBI CGTCTC 1 cut(s) 270
BsnI GGCC 3 cut(s) 1111, 1151, 1440
Bsp143I GATC 3 cut(s) 183, 292, 907
Bsp19I CCATGG 2 cut(s) 1088, 1146
BspACI CCGC 2 cut(s) 1027, 1152
BspANI GGCC 3 cut(s) 1111, 1151, 1440
BspCNI CTCAG 1 cut(s) 284
BspHI TCATGA 1 cut(s) 565
BspLI GGNNCC 3 cut(s) 679, 819, 1018
BspMAI CTGCAG 1 cut(s) 364
BspPI GGATC 1 cut(s) 902
BspT107I GGYRCC 1 cut(s) 677
BsrDI GCAATG 2 cut(s) 975, 1022
BsrFI RCCGGY 1 cut(s) 1476
BsrI ACTGG 5 cut(s) 58, 67, 405, 1250, 1409
BssAI RCCGGY 1 cut(s) 1476
BssECI CCNNGG 2 cut(s) 1088, 1146
BssMI GATC 3 cut(s) 183, 292, 907
BssNAI GTATAC 1 cut(s) 899
BssT1I CCWWGG 2 cut(s) 1088, 1146
Bst1107I GTATAC 1 cut(s) 899
Bst2UI CCWGG 2 cut(s) 29, 1437
Bst4CI ACNGT 4 cut(s) 330, 1138, 1269, 1469
BstC8I GCNNGC 2 cut(s) 173, 1478
BstDEI CTNAG 3 cut(s) 98, 271, 690
BstDSI CCRYGG 2 cut(s) 1088, 1146
BstEII GGTNACC 1 cut(s) 764
BstF5I GGATG 3 cut(s) 385, 547, 707
BstKTI GATC 3 cut(s) 186, 295, 910
BstMAI GTCTC 1 cut(s) 270
BstMBI GATC 3 cut(s) 183, 292, 907
BstMWI GCNNNNNNNGC 3 cut(s) 149, 158, 867
BstNI CCWGG 2 cut(s) 29, 1437
BstNSI RCATGY 4 cut(s) 175, 481, 897, 1171
BstPI GGTNACC 1 cut(s) 764
BstSCI CCNGG 2 cut(s) 27, 1435
BstSFI CTRYAG 1 cut(s) 360
BstV1I GCAGC 2 cut(s) 239, 374
BstX2I RGATCY 1 cut(s) 292
BstYI RGATCY 1 cut(s) 292
BstZ17I GTATAC 1 cut(s) 899
BsuI GTATCC 1 cut(s) 333
BsuRI GGCC 3 cut(s) 1111, 1151, 1440
BtgI CCRYGG 2 cut(s) 1088, 1146
BtgZI GCGATG 1 cut(s) 152
BtsCI GGATG 3 cut(s) 385, 547, 707
BtsIMutI CAGTG 1 cut(s) 398
Cac8I GCNNGC 2 cut(s) 173, 1478
CciI TCATGA 1 cut(s) 565
Cfr10I RCCGGY 1 cut(s) 1476
Csp6I GTAC 2 cut(s) 1165, 1282
CviQI GTAC 2 cut(s) 1165, 1282
DdeI CTNAG 3 cut(s) 98, 271, 690
DpnI GATC 3 cut(s) 185, 294, 909
DpnII GATC 3 cut(s) 183, 292, 907
DraIII CACNNNGTG 1 cut(s) 375
EaeI YGGCCR 1 cut(s) 1149
Eco130I CCWWGG 2 cut(s) 1088, 1146
Eco147I AGGCCT 1 cut(s) 1111
Eco91I GGTNACC 1 cut(s) 764
EcoO65I GGTNACC 1 cut(s) 764
EcoRII CCWGG 2 cut(s) 27, 1435
EcoT14I CCWWGG 2 cut(s) 1088, 1146
EcoT22I ATGCAT 1 cut(s) 177
ErhI CCWWGG 2 cut(s) 1088, 1146
Esp3I CGTCTC 1 cut(s) 270
FalI AAGNNNNNCTT 8 cut(s) 29, 61, 437, 469, 873, 905, 1295, 1327
FblI GTMKAC 1 cut(s) 898
Fnu4HI GCNGC 3 cut(s) 228, 363, 1152
FokI GGATG 3 cut(s) 392, 554, 714
Fsp4HI GCNGC 3 cut(s) 228, 363, 1152
FspBI CTAG 3 cut(s) 296, 521, 749
GluI GCNGC 3 cut(s) 228, 363, 1152
GsuI CTGGAG 3 cut(s) 50, 75, 482
HaeIII GGCC 3 cut(s) 1111, 1151, 1440
HapII CCGG 2 cut(s) 935, 1477
HincII GTYRAC 4 cut(s) 483, 574, 723, 940
HindII GTYRAC 4 cut(s) 483, 574, 723, 940
HindIII AAGCTT 1 cut(s) 887
HinfI GANTC 5 cut(s) 239, 527, 931, 1030, 1308
HpaI GTTAAC 1 cut(s) 723
HpaII CCGG 2 cut(s) 935, 1477
HphI GGTGA 1 cut(s) 512
Hpy166II GTNNAC 6 cut(s) 475, 483, 574, 723, 899, 940
Hpy188I TCNGA 8 cut(s) 74, 148, 253, 643, 848, 1048, 1223, 1330
Hpy188III TCNNGA 4 cut(s) 205, 273, 461, 566
Hpy8I GTNNAC 6 cut(s) 475, 483, 574, 723, 899, 940
HpyAV CCTTC 6 cut(s) 253, 298, 833, 1101, 1174, 1335
HpyCH4III ACNGT 4 cut(s) 330, 1138, 1269, 1469
HpyCH4IV ACGT 4 cut(s) 114, 279, 636, 787
HpyCH4V TGCA 9 cut(s) 175, 362, 398, 443, 609, 983, 1077, 1171, 1370
HpyF10VI GCNNNNNNNGC 3 cut(s) 149, 158, 867
HpyF3I CTNAG 3 cut(s) 98, 271, 690
HpySE526I ACGT 4 cut(s) 114, 279, 636, 787
KroI GCCGGC 1 cut(s) 1476
KroNI GCCGGC 1 cut(s) 1478
KspAI GTTAAC 1 cut(s) 723
Kzo9I GATC 3 cut(s) 183, 292, 907
LmnI GCTCC 3 cut(s) 56, 817, 1356
Lsp1109I GCAGC 2 cut(s) 239, 374
LweI GCATC 2 cut(s) 139, 1357
MaeI CTAG 3 cut(s) 296, 521, 749
MaeII ACGT 4 cut(s) 114, 279, 636, 787
MaeIII GTNAC 4 cut(s) 280, 764, 1138, 1427
MalI GATC 3 cut(s) 185, 294, 909
MboI GATC 3 cut(s) 183, 292, 907
MboII GAAGA 7 cut(s) 122, 335, 525, 607, 656, 1421, 1459
MflI RGATCY 1 cut(s) 292
MlyI GAGTC 1 cut(s) 521
MmeI TCCRAC 3 cut(s) 52, 815, 994
MnlI CCTC 5 cut(s) 517, 691, 1030, 1044, 1324
Mph1103I ATGCAT 1 cut(s) 177
MroNI GCCGGC 1 cut(s) 1476
MspI CCGG 2 cut(s) 935, 1477
MspR9I CCNGG 2 cut(s) 29, 1437
MvaI CCWGG 2 cut(s) 29, 1437
MwoI GCNNNNNNNGC 3 cut(s) 149, 158, 867
NaeI GCCGGC 1 cut(s) 1478
NcoI CCATGG 2 cut(s) 1088, 1146
NdeII GATC 3 cut(s) 183, 292, 907
NgoMIV GCCGGC 1 cut(s) 1476
NlaIV GGNNCC 3 cut(s) 679, 819, 1018
NmuCI GTSAC 1 cut(s) 1427
NsiI ATGCAT 1 cut(s) 177
NspI RCATGY 4 cut(s) 175, 481, 897, 1171
PaeI GCATGC 1 cut(s) 175
PagI TCATGA 1 cut(s) 565
PceI AGGCCT 1 cut(s) 1111
PciI ACATGT 2 cut(s) 477, 893
PdiI GCCGGC 1 cut(s) 1478
PfeI GAWTC 4 cut(s) 239, 931, 1030, 1308
PflMI CCANNNNNTGG 1 cut(s) 827
PkrI GCNGC 3 cut(s) 229, 364, 1153
PleI GAGTC 1 cut(s) 521
PpsI GAGTC 1 cut(s) 521
PscI ACATGT 2 cut(s) 477, 893
PshBI ATTAAT 1 cut(s) 354
Psp6I CCWGG 2 cut(s) 27, 1435
PspEI GGTNACC 1 cut(s) 764
PspGI CCWGG 2 cut(s) 27, 1435
PspN4I GGNNCC 3 cut(s) 679, 819, 1018
PstI CTGCAG 1 cut(s) 364
PsuI RGATCY 1 cut(s) 292
RsaI GTAC 2 cut(s) 1166, 1283
RsaNI GTAC 2 cut(s) 1165, 1282
SatI GCNGC 3 cut(s) 228, 363, 1152
Sau3AI GATC 3 cut(s) 183, 292, 907
SchI GAGTC 1 cut(s) 521
ScrFI CCNGG 2 cut(s) 29, 1437
SfaNI GCATC 2 cut(s) 139, 1357
SfcI CTRYAG 1 cut(s) 360
SmlI CTYRAG 1 cut(s) 682
SmoI CTYRAG 1 cut(s) 682
SphI GCATGC 1 cut(s) 175
SseBI AGGCCT 1 cut(s) 1111
SsiI CCGC 2 cut(s) 1027, 1152
SspMI CTAG 3 cut(s) 296, 521, 749
StuI AGGCCT 1 cut(s) 1111
StyD4I CCNGG 2 cut(s) 27, 1435
StyI CCWWGG 2 cut(s) 1088, 1146
TaaI ACNGT 4 cut(s) 330, 1138, 1269, 1469
TaiI ACGT 4 cut(s) 117, 282, 639, 790
TaqI TCGA 1 cut(s) 906
TauI GCSGC 1 cut(s) 1154
TfiI GAWTC 4 cut(s) 239, 931, 1030, 1308
TscAI CASTG 1 cut(s) 405
TseFI GTSAC 1 cut(s) 1427
TseI GCWGC 2 cut(s) 227, 362
Tsp45I GTSAC 1 cut(s) 1427
TspDTI ATGAA 4 cut(s) 235, 396, 603, 680
TspRI CASTG 1 cut(s) 405
Van91I CCANNNNNTGG 1 cut(s) 827
VspI ATTAAT 1 cut(s) 354
XapI RAATTY 8 cut(s) 5, 232, 952, 1040, 1058, 1205, 1290, 1375
XceI RCATGY 4 cut(s) 175, 481, 897, 1171
XcmI CCANNNNNNNNNTGG 1 cut(s) 828
XmiI GTMKAC 1 cut(s) 898
XspI CTAG 3 cut(s) 296, 521, 749
Zsp2I ATGCAT 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.