Rorug04G0119300

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
18887864 .. 18889783
1920 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0119300.1

Sequence Viewer

Length: 1074 bp
ATGTCGTTTCACAAAACAACAACGTGCTATAAAGACTTCAGGAGCAGTTATCTAGATGTTGTCTGCAAACAATCTGGTCGCTCCAACTTTATGTGCTTAACACGGTCAAGGTTGTTACCCAATGAGACATTATCAAAACGTGAACAGGCTGCGAAATTCTCACAGAAGAATGACTTTTTGTGCCGTGCATTGAAAGTTGAAAATTCATCTTCCTTTTCGACAGGGAAGAAGTTTCAACTTGATGATGTGATTGAAGCTCAACAATTTGATAGAGATATTCTCAGTGCTATTTTTGAAGTTGCACGTGGTATGGAGAAGATTGAGAAGAATTCTCTGGGAAGCCAAATTCTTAAGGTTTTGACTACTGAAAATGCAAGGGAGTTTTCTTCAGCAGCTAAAGGAGAAACTCTTGAAGATTCTATAAGAACTGTTGAAGGTTACTCGGATATAATTGTAATGCGTCACTTTGAGAGTGGGGCAGCAAAAAGAGCTGCAGCAACTGCTGCCATTCCTATAATTAATGCAGGAGATGGTCCTGGACAACATCCAACGCAGGCTCTTTTAGACGTCTACACTATTGAAAGGGAGATAGGAAAGCTAGATGGAATTAGAGTTGCGCTTGTTGGTGATCTTGCTAACGGAAGGACTGTGCGCTCACTGGCATACTTGCTTGCTAGGTATAACGATGTGAAGATCTATTTCGTATCTCCTGATGCGGTTAAAATGAAGGATGATATAAAAGATTATTTGACGTCAAAGGAAGTTGAATGGGAAGAAAGTGCTGATTTGATGGAAGTTGCTTCCAAGTGTGATGTTCTTTATCAAACTCGCATTCAGCGTGAACGGTTTGGAGAAAGAATTGACCTCTATGAAGAAGCTCGAGGCAAGTACATTGTGGACCATCATGTGTTGGATGTGATGCAGAAGCATGCTGTGGTCATGCACCCGCTGCCTAGACTTGATGAGATTACTGTGGATGTTGATGGGGATCCGAGAGCTGCCTATTTCAGACAAGCAAAGAACGGCCTATACATTAGGATGGCACTCTTGAAACTACTACTTGTGGGGTGGTGA

Protein Analysis

357

Amino Acids

40.4

Weight (kDa)

6.68

Isoelectric Point (pI)

30.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OTCace_N PF02729 112 - 194 3.6e-22 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
OTCace PF00185 201 - 352 7e-33 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 570, 755
AccI GTMKAC 1 cut(s) 570
AciI CCGC 2 cut(s) 716, 947
AclWI GGATC 2 cut(s) 983, 996
AcsI RAATTY 4 cut(s) 155, 202, 328, 345
AcuI CTGAAG 2 cut(s) 22, 372
AcvI CACGTG 1 cut(s) 305
AcyI GRCGYC 2 cut(s) 567, 752
AfaI GTAC 1 cut(s) 890
AflII CTTAAG 1 cut(s) 350
AjnI CCWGG 1 cut(s) 535
AluBI AGCT 6 cut(s) 257, 395, 491, 598, 878, 998
AluI AGCT 6 cut(s) 257, 395, 491, 598, 878, 998
Alw26I GTCTC 1 cut(s) 119
AlwI GGATC 2 cut(s) 983, 996
AlwNI CAGNNNCTG 1 cut(s) 500
Ama87I CYCGRG 1 cut(s) 879
AoxI GGCC 1 cut(s) 1024
ApeKI GCWGC 8 cut(s) 149, 392, 479, 491, 494, 503, 949, 998
ApoI RAATTY 4 cut(s) 155, 202, 328, 345
AseI ATTAAT 1 cut(s) 519
AspLEI GCGC 2 cut(s) 619, 654
AspS9I GGNCC 2 cut(s) 533, 898
AsuHPI GGTGA 1 cut(s) 638
AvaI CYCGRG 1 cut(s) 879
AvaII GGWCC 2 cut(s) 533, 898
BamHI GGATCC 1 cut(s) 988
BbrPI CACGTG 1 cut(s) 305
BbvI GCAGC 8 cut(s) 136, 404, 478, 490, 491, 506, 936, 985
BccI CCATC 6 cut(s) 524, 596, 784, 909, 977, 1033
BceAI ACGGC 2 cut(s) 168, 1039
BciT130I CCWGG 1 cut(s) 537
BcoDI GTCTC 1 cut(s) 119
BfaI CTAG 4 cut(s) 53, 599, 675, 954
BfmI CTRYAG 1 cut(s) 492
BfrI CTTAAG 1 cut(s) 350
BglII AGATCT 1 cut(s) 693
BisI GCNGC 8 cut(s) 150, 393, 480, 492, 495, 504, 950, 999
BlsI GCNGC 8 cut(s) 151, 394, 481, 493, 496, 505, 951, 1000
Bme1390I CCNGG 1 cut(s) 537
Bme18I GGWCC 2 cut(s) 533, 898
BmeT110I CYCGRG 1 cut(s) 879
BmgT120I GGNCC 2 cut(s) 533, 898
BmiI GGNNCC 1 cut(s) 990
BmrFI CCNGG 1 cut(s) 537
BmsI GCATC 2 cut(s) 703, 909
BplI GAGNNNNNCTC 2 cut(s) 264, 296
BsaAI YACGTR 1 cut(s) 305
BsaBI GATNNNNATC 1 cut(s) 987
BsaHI GRCGYC 2 cut(s) 567, 752
Bse1I ACTGG 1 cut(s) 663
Bse8I GATNNNNATC 1 cut(s) 987
BseBI CCWGG 1 cut(s) 537
BseGI GGATG 5 cut(s) 544, 736, 919, 982, 1044
BseJI GATNNNNATC 1 cut(s) 987
BseMII CTCAG 1 cut(s) 295
BseNI ACTGG 1 cut(s) 663
BseXI GCAGC 8 cut(s) 136, 404, 478, 490, 491, 506, 936, 985
BshFI GGCC 1 cut(s) 1026
BsiHKCI CYCGRG 1 cut(s) 879
BsmAI GTCTC 1 cut(s) 119
BsmI GAATGC 1 cut(s) 831
BsnI GGCC 1 cut(s) 1026
BsoBI CYCGRG 1 cut(s) 879
Bsp143I GATC 3 cut(s) 628, 693, 988
BspACI CCGC 2 cut(s) 716, 947
BspANI GGCC 1 cut(s) 1026
BspCNI CTCAG 1 cut(s) 294
BspLI GGNNCC 1 cut(s) 990
BspMAI CTGCAG 1 cut(s) 496
BspPI GGATC 2 cut(s) 983, 996
BspTI CTTAAG 1 cut(s) 350
BsrI ACTGG 1 cut(s) 663
BssMI GATC 3 cut(s) 628, 693, 988
BssNI GRCGYC 2 cut(s) 567, 752
Bst2UI CCWGG 1 cut(s) 537
Bst4CI ACNGT 5 cut(s) 105, 430, 649, 846, 973
BstACI GRCGYC 2 cut(s) 567, 752
BstAFI CTTAAG 1 cut(s) 350
BstAPI GCANNNNNTGC 3 cut(s) 500, 503, 949
BstBAI YACGTR 1 cut(s) 305
BstC8I GCNNGC 3 cut(s) 555, 672, 930
BstDEI CTNAG 1 cut(s) 281
BstF5I GGATG 5 cut(s) 544, 736, 919, 982, 1044
BstHHI GCGC 2 cut(s) 619, 654
BstKTI GATC 3 cut(s) 631, 696, 991
BstMAI GTCTC 1 cut(s) 119
BstMBI GATC 3 cut(s) 628, 693, 988
BstMWI GCNNNNNNNGC 4 cut(s) 488, 500, 503, 949
BstNI CCWGG 1 cut(s) 537
BstNSI RCATGY 1 cut(s) 932
BstSCI CCNGG 1 cut(s) 535
BstSFI CTRYAG 1 cut(s) 492
BstV1I GCAGC 8 cut(s) 136, 404, 478, 490, 491, 506, 936, 985
BstX2I RGATCY 2 cut(s) 693, 988
BstYI RGATCY 2 cut(s) 693, 988
BsuRI GGCC 1 cut(s) 1026
BtsCI GGATG 5 cut(s) 544, 736, 919, 982, 1044
BtsIMutI CAGTG 2 cut(s) 289, 656
Cac8I GCNNGC 3 cut(s) 555, 672, 930
CaiI CAGNNNCTG 1 cut(s) 500
CfoI GCGC 2 cut(s) 619, 654
Cfr13I GGNCC 2 cut(s) 533, 898
CseI GACGC 1 cut(s) 449
Csp6I GTAC 1 cut(s) 889
CviAII CATG 3 cut(s) 905, 929, 940
CviQI GTAC 1 cut(s) 889
DdeI CTNAG 1 cut(s) 281
DpnI GATC 3 cut(s) 630, 695, 990
DpnII GATC 3 cut(s) 628, 693, 988
Eco47I GGWCC 2 cut(s) 533, 898
Eco57I CTGAAG 2 cut(s) 22, 372
Eco72I CACGTG 1 cut(s) 305
Eco88I CYCGRG 1 cut(s) 879
EcoRI GAATTC 1 cut(s) 328
EcoRII CCWGG 1 cut(s) 535
FaeI CATG 3 cut(s) 908, 932, 943
FalI AAGNNNNNCTT 2 cut(s) 158, 190
FatI CATG 3 cut(s) 904, 928, 939
FauI CCCGC 1 cut(s) 954
FblI GTMKAC 1 cut(s) 570
Fnu4HI GCNGC 8 cut(s) 150, 393, 480, 492, 495, 504, 950, 999
FokI GGATG 5 cut(s) 531, 743, 926, 989, 1051
Fsp4HI GCNGC 8 cut(s) 150, 393, 480, 492, 495, 504, 950, 999
FspBI CTAG 4 cut(s) 53, 599, 675, 954
GlaI GCGC 2 cut(s) 618, 653
GluI GCNGC 8 cut(s) 150, 393, 480, 492, 495, 504, 950, 999
HaeIII GGCC 1 cut(s) 1026
HgaI GACGC 1 cut(s) 449
HhaI GCGC 2 cut(s) 619, 654
Hin1I GRCGYC 2 cut(s) 567, 752
Hin1II CATG 3 cut(s) 908, 932, 943
Hin6I GCGC 2 cut(s) 617, 652
HinP1I GCGC 2 cut(s) 617, 652
HinfI GANTC 1 cut(s) 416
HphI GGTGA 1 cut(s) 638
Hpy166II GTNNAC 4 cut(s) 143, 571, 842, 898
Hpy188I TCNGA 3 cut(s) 445, 993, 1010
Hpy188III TCNNGA 5 cut(s) 40, 53, 410, 710, 1048
Hpy8I GTNNAC 4 cut(s) 143, 571, 842, 898
HpyAV CCTTC 3 cut(s) 428, 636, 721
HpyCH4III ACNGT 5 cut(s) 105, 430, 649, 846, 973
HpyCH4IV ACGT 5 cut(s) 23, 139, 304, 567, 752
HpyCH4V TGCA 8 cut(s) 66, 188, 302, 374, 494, 524, 922, 943
HpyF10VI GCNNNNNNNGC 4 cut(s) 488, 500, 503, 949
HpyF3I CTNAG 1 cut(s) 281
HpySE526I ACGT 5 cut(s) 23, 139, 304, 567, 752
Hsp92I GRCGYC 2 cut(s) 567, 752
Hsp92II CATG 3 cut(s) 908, 932, 943
HspAI GCGC 2 cut(s) 617, 652
Kzo9I GATC 3 cut(s) 628, 693, 988
LmnI GCTCC 2 cut(s) 42, 86
Lsp1109I GCAGC 8 cut(s) 136, 404, 478, 490, 491, 506, 936, 985
LweI GCATC 2 cut(s) 703, 909
MaeI CTAG 4 cut(s) 53, 599, 675, 954
MaeII ACGT 5 cut(s) 23, 139, 304, 567, 752
MaeIII GTNAC 3 cut(s) 114, 437, 461
MalI GATC 3 cut(s) 630, 695, 990
MboI GATC 3 cut(s) 628, 693, 988
MflI RGATCY 2 cut(s) 693, 988
MluCI AATT 9 cut(s) 155, 202, 263, 328, 345, 450, 516, 606, 858
MmeI TCCRAC 3 cut(s) 108, 572, 891
MnlI CCTC 2 cut(s) 875, 875
MseI TTAA 4 cut(s) 98, 351, 519, 720
MslI CAYNNNNRTG 1 cut(s) 1037
MspA1I CMGCKG 1 cut(s) 949
MspCI CTTAAG 1 cut(s) 350
MspR9I CCNGG 1 cut(s) 537
Mva1269I GAATGC 1 cut(s) 831
MvaI CCWGG 1 cut(s) 537
MwoI GCNNNNNNNGC 4 cut(s) 488, 500, 503, 949
NdeII GATC 3 cut(s) 628, 693, 988
NlaIII CATG 3 cut(s) 908, 932, 943
NlaIV GGNNCC 1 cut(s) 990
NmuCI GTSAC 1 cut(s) 461
NspI RCATGY 1 cut(s) 932
PaeI GCATGC 1 cut(s) 932
PaeR7I CTCGAG 1 cut(s) 879
PcsI WCGNNNNNNNCGW 1 cut(s) 835
PctI GAATGC 1 cut(s) 831
PfeI GAWTC 1 cut(s) 416
PfoI TCCNGGA 1 cut(s) 535
PkrI GCNGC 8 cut(s) 151, 394, 481, 493, 496, 505, 951, 1000
PmaCI CACGTG 1 cut(s) 305
PmlI CACGTG 1 cut(s) 305
Ppu21I YACGTR 1 cut(s) 305
PshBI ATTAAT 1 cut(s) 519
Psp6I CCWGG 1 cut(s) 535
PspCI CACGTG 1 cut(s) 305
PspGI CCWGG 1 cut(s) 535
PspN4I GGNNCC 1 cut(s) 990
PspPI GGNCC 2 cut(s) 533, 898
PspXI VCTCGAGB 1 cut(s) 879
PsrI GAACNNNNNNTAC 2 cut(s) 1013, 1045
PstI CTGCAG 1 cut(s) 496
PstNI CAGNNNCTG 1 cut(s) 500
PsuI RGATCY 2 cut(s) 693, 988
RsaI GTAC 1 cut(s) 890
RsaNI GTAC 1 cut(s) 889
RseI CAYNNNNRTG 1 cut(s) 1037
SaqAI TTAA 4 cut(s) 98, 351, 519, 720
SatI GCNGC 8 cut(s) 150, 393, 480, 492, 495, 504, 950, 999
Sau3AI GATC 3 cut(s) 628, 693, 988
Sau96I GGNCC 2 cut(s) 533, 898
ScrFI CCNGG 1 cut(s) 537
SfaNI GCATC 2 cut(s) 703, 909
SfcI CTRYAG 1 cut(s) 492
Sfr274I CTCGAG 1 cut(s) 879
SinI GGWCC 2 cut(s) 533, 898
SlaI CTCGAG 1 cut(s) 879
SmiMI CAYNNNNRTG 1 cut(s) 1037
SmlI CTYRAG 2 cut(s) 350, 879
SmoI CTYRAG 2 cut(s) 350, 879
SphI GCATGC 1 cut(s) 932
Sse9I AATT 9 cut(s) 155, 202, 263, 328, 345, 450, 516, 606, 858
SsiI CCGC 2 cut(s) 716, 947
SspMI CTAG 4 cut(s) 53, 599, 675, 954
StyD4I CCNGG 1 cut(s) 535
TaaI ACNGT 5 cut(s) 105, 430, 649, 846, 973
TaiI ACGT 5 cut(s) 26, 142, 307, 570, 755
TaqI TCGA 2 cut(s) 218, 880
TasI AATT 9 cut(s) 155, 202, 263, 328, 345, 450, 516, 606, 858
TatI WGTACW 1 cut(s) 888
TfiI GAWTC 1 cut(s) 416
Tru1I TTAA 4 cut(s) 98, 351, 519, 720
Tru9I TTAA 4 cut(s) 98, 351, 519, 720
TscAI CASTG 2 cut(s) 289, 663
TseFI GTSAC 1 cut(s) 461
TseI GCWGC 8 cut(s) 149, 392, 479, 491, 494, 503, 949, 998
Tsp45I GTSAC 1 cut(s) 461
TspDTI ATGAA 3 cut(s) 195, 740, 885
TspGWI ACGGA 1 cut(s) 654
TspRI CASTG 2 cut(s) 289, 663
Vha464I CTTAAG 1 cut(s) 350
VpaK11BI GGWCC 2 cut(s) 533, 898
VspI ATTAAT 1 cut(s) 519
XapI RAATTY 4 cut(s) 155, 202, 328, 345
XbaI TCTAGA 1 cut(s) 52
XceI RCATGY 1 cut(s) 932
XhoI CTCGAG 1 cut(s) 879
XmiI GTMKAC 1 cut(s) 570
XspI CTAG 4 cut(s) 53, 599, 675, 954
ZraI GACGTC 2 cut(s) 568, 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.