RchiOBHm_Chr3g0483921

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
30243908 .. 30248158
4251 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44865

Sequence Viewer

Length: 1365 bp
ATGGAATTGGAGAGCATACTGGGATACCTGAAGAACAAGACTATCTTAATCACTGGAGCTACCGGCTTTGTAGGAAAGGTCTTGGTAGAGAAAATATTAAGAGTTCAACCAGACGTGAAAAGGCTCTATCTTCTTTTAAGAGCTTCCGATGCCAACTCTGCCACACAACGCATGCATAATGAGATTACAGGGAAAGAGTTGTTCAGGGTTCTGAGGGAGAAATTAGGTGCAGATTTTGATTCTTACATATTGGAAAAAGTTGTTGCTCTGTCGGGAGATGTAATTTTTCAAGATCTAGGAGTGAAGCCAGTCAAACTAAAGGAAGAGATGTGCAATGAAGTACAAATCATACTTAATTCTGCAGCAATCACTAGGTTTGATGAAAGGTATGATGTTGCGTTGGATGTGAATACATTTGGAGTTTTGAATATGTTGGACTTTGCAAAAAAATGCTTGAAATTGGAGATGGTTGTCCACGTGTCAACAGCTTATGTGTGTGGTGAAAGGGCAGGGCTGATACTAGAGGACTCCTCTTCAATGGATGAGATGGCAAAAAAACCCAGTAAATTTGACTTGAAATCGCAGGAAAAGAAAATGGTGGAGAACAAGTTGAAAGAACTACAAGCACAAAACGCTTCAGAAGAAGTTATAACAAGTGCAATGAAGGACTTAGGCACCGCAAGGTCTAAGTTGTACGGGTGGGCAAATACCTATGTGCTTACAAAGGTGATGGGAGAAATGTATCTAGGACATGCAAAAGGTAATCTATCTGTTGCTATTATACGTCCAACTATGATTACAAGTACATACAAGGAGCCATTTTCAGGCTGGATCGAAGGTTTCAGAACATATGATAGTGTAATTGGTGGTTACTGGAAAGGGAAGCTCACAGGCATACCTGTCGATCCTATGTCAGTAGTGGATATGATTCCAGTTGACATGGTGGTAAATTCAATAATTACAGCGATGGTCGTTAATGCAAACAAATCTGGCAAAATCATTTACCACCTGGGAACTTCATTGAGAAATCCCTTAACATTTTCTGATTTTAACAACTTTATGTTCCAATACTGCACCAAAAATCCATGGCTTAACAATGATGGAAGCCCAGTCAAGGTTGGAAAGTTGAAAATGTTGAGGAGTATGGACACTTTTCATTTGTACATGCAAATACCATTACAGGTTTGTTTCTTTGATGACACCAATGCAGAAGAGTTGCGAAGGATAGCAAGTGAGAACTACACAGATGCAGACAATTTTAATTTTGATCCAAAGTGCATAGATTGGGAAGACTACTATATGCATACTCACATTCCTGGCTTTGCAAAGCATGTTGTCATCAAACACAGCCAAAGTCGACTTTGA

Protein Analysis

454

Amino Acids

51.37

Weight (kDa)

7.11

Isoelectric Point (pI)

37.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Epimerase PF01370 15 - 173 7.8e-07 NAD dependent epimerase/dehydratase family
NAD_binding_4 PF07993 17 - 319 8.4e-72 Male sterility protein
Sterile PF03015 393 - 446 1.2e-08 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 650
AccB1I GGYRCC 1 cut(s) 674
AccI GTMKAC 1 cut(s) 1357
AciI CCGC 1 cut(s) 678
AclWI GGATC 3 cut(s) 839, 899, 1262
AcsI RAATTY 2 cut(s) 566, 949
AcuI CTGAAG 2 cut(s) 50, 621
AcvI CACGTG 1 cut(s) 478
AfaI GTAC 4 cut(s) 342, 695, 805, 1163
AfiI CCNNNNNNNGG 2 cut(s) 824, 1114
AflIII ACRYGT 1 cut(s) 477
AgsI TTSAA 9 cut(s) 107, 290, 427, 457, 537, 577, 613, 954, 1129
AjiI CACGTC 1 cut(s) 115
AjnI CCWGG 2 cut(s) 1008, 1315
AluBI AGCT 4 cut(s) 59, 143, 488, 886
AluI AGCT 4 cut(s) 59, 143, 488, 886
AlwI GGATC 3 cut(s) 839, 899, 1262
ApeKI GCWGC 1 cut(s) 362
ApoI RAATTY 2 cut(s) 566, 949
AsuHPI GGTGA 2 cut(s) 512, 739
BanI GGYRCC 1 cut(s) 674
BbrPI CACGTG 1 cut(s) 478
BbsI GAAGAC 1 cut(s) 1296
BbvI GCAGC 1 cut(s) 374
BccI CCATC 5 cut(s) 460, 541, 724, 961, 1094
BcgI CGANNNNNNTGC 2 cut(s) 883, 917
BciT130I CCWGG 2 cut(s) 1010, 1317
BciVI GTATCC 1 cut(s) 17
BfaI CTAG 4 cut(s) 296, 372, 521, 746
BfmI CTRYAG 1 cut(s) 360
BfuI GTATCC 1 cut(s) 17
BglII AGATCT 1 cut(s) 292
BisI GCNGC 1 cut(s) 363
BlsI GCNGC 1 cut(s) 364
Bme1390I CCNGG 2 cut(s) 1010, 1317
BmgBI CACGTC 1 cut(s) 115
BmiI GGNNCC 2 cut(s) 676, 816
BmrFI CCNGG 2 cut(s) 1010, 1317
BmrI ACTGGG 3 cut(s) 29, 555, 1103
BmsI GCATC 2 cut(s) 139, 1237
BmuI ACTGGG 3 cut(s) 29, 555, 1103
BpiI GAAGAC 1 cut(s) 1296
BplI GAGNNNNNCTC 2 cut(s) 515, 547
BpmI CTGGAG 1 cut(s) 75
BsaAI YACGTR 1 cut(s) 478
BsaJI CCNNGG 2 cut(s) 1009, 1085
BsaXI ACNNNNNCTCC 2 cut(s) 593, 623
Bsc4I CCNNNNNNNGG 2 cut(s) 824, 1114
Bse118I RCCGGY 1 cut(s) 62
Bse1I ACTGG 7 cut(s) 24, 58, 308, 561, 878, 932, 1109
Bse3DI GCAATG 2 cut(s) 340, 666
BseBI CCWGG 2 cut(s) 1010, 1317
BseDI CCNNGG 2 cut(s) 1009, 1085
BseGI GGATG 2 cut(s) 409, 547
BseLI CCNNNNNNNGG 2 cut(s) 824, 1114
BseMI GCAATG 2 cut(s) 340, 666
BseMII CTCAG 1 cut(s) 203
BseNI ACTGG 7 cut(s) 24, 58, 308, 561, 878, 932, 1109
BseRI GAGGAG 2 cut(s) 520, 1153
BseXI GCAGC 1 cut(s) 374
BsgI GTGCAG 2 cut(s) 249, 1057
BshNI GGYRCC 1 cut(s) 674
BsiSI CCGG 1 cut(s) 63
BslI CCNNNNNNNGG 2 cut(s) 824, 1114
Bsp1407I TGTACA 1 cut(s) 1161
Bsp143I GATC 4 cut(s) 292, 831, 904, 1267
Bsp19I CCATGG 1 cut(s) 1085
BspACI CCGC 1 cut(s) 678
BspCNI CTCAG 1 cut(s) 204
BspLI GGNNCC 2 cut(s) 676, 816
BspMAI CTGCAG 1 cut(s) 364
BspPI GGATC 3 cut(s) 839, 899, 1262
BspT107I GGYRCC 1 cut(s) 674
BsrDI GCAATG 2 cut(s) 340, 666
BsrFI RCCGGY 1 cut(s) 62
BsrGI TGTACA 1 cut(s) 1161
BsrI ACTGG 7 cut(s) 24, 58, 308, 561, 878, 932, 1109
BssAI RCCGGY 1 cut(s) 62
BssECI CCNNGG 2 cut(s) 1009, 1085
BssMI GATC 4 cut(s) 292, 831, 904, 1267
BssT1I CCWWGG 1 cut(s) 1085
Bst2UI CCWGG 2 cut(s) 1010, 1317
Bst6I CTCTTC 3 cut(s) 318, 538, 1206
BstAUI TGTACA 1 cut(s) 1161
BstBAI YACGTR 1 cut(s) 478
BstC8I GCNNGC 1 cut(s) 173
BstDEI CTNAG 3 cut(s) 212, 670, 687
BstDSI CCRYGG 1 cut(s) 1085
BstF5I GGATG 2 cut(s) 409, 547
BstKTI GATC 4 cut(s) 295, 834, 907, 1270
BstMBI GATC 4 cut(s) 292, 831, 904, 1267
BstMWI GCNNNNNNNGC 3 cut(s) 149, 158, 632
BstNI CCWGG 2 cut(s) 1010, 1317
BstNSI RCATGY 4 cut(s) 175, 755, 1168, 1334
BstSCI CCNGG 2 cut(s) 1008, 1315
BstSFI CTRYAG 1 cut(s) 360
BstV1I GCAGC 1 cut(s) 374
BstV2I GAAGAC 1 cut(s) 1296
BstX2I RGATCY 1 cut(s) 292
BstYI RGATCY 1 cut(s) 292
BsuI GTATCC 1 cut(s) 17
BtgI CCRYGG 1 cut(s) 1085
BtgZI GCGATG 1 cut(s) 980
BtrI CACGTC 1 cut(s) 115
BtsCI GGATG 2 cut(s) 409, 547
BtsIMutI CAGTG 1 cut(s) 51
Cac8I GCNNGC 1 cut(s) 173
Cfr10I RCCGGY 1 cut(s) 62
Csp6I GTAC 4 cut(s) 341, 694, 804, 1162
CviAII CATG 6 cut(s) 172, 752, 940, 1086, 1165, 1331
CviQI GTAC 4 cut(s) 341, 694, 804, 1162
DdeI CTNAG 3 cut(s) 212, 670, 687
DpnI GATC 4 cut(s) 294, 833, 906, 1269
DpnII GATC 4 cut(s) 292, 831, 904, 1267
Eam1104I CTCTTC 3 cut(s) 318, 538, 1206
EarI CTCTTC 3 cut(s) 318, 538, 1206
Eco130I CCWWGG 1 cut(s) 1085
Eco57I CTGAAG 2 cut(s) 50, 621
Eco72I CACGTG 1 cut(s) 478
EcoRII CCWGG 2 cut(s) 1008, 1315
EcoT14I CCWWGG 1 cut(s) 1085
EcoT22I ATGCAT 2 cut(s) 177, 1305
ErhI CCWWGG 1 cut(s) 1085
FaeI CATG 6 cut(s) 175, 755, 943, 1089, 1168, 1334
FalI AAGNNNNNCTT 2 cut(s) 29, 61
FatI CATG 6 cut(s) 171, 751, 939, 1085, 1164, 1330
FauNDI CATATG 1 cut(s) 850
FblI GTMKAC 1 cut(s) 1357
Fnu4HI GCNGC 1 cut(s) 363
FokI GGATG 2 cut(s) 416, 554
Fsp4HI GCNGC 1 cut(s) 363
FspBI CTAG 4 cut(s) 296, 372, 521, 746
GluI GCNGC 1 cut(s) 363
GsuI CTGGAG 1 cut(s) 75
HapII CCGG 1 cut(s) 63
Hin1II CATG 6 cut(s) 175, 755, 943, 1089, 1168, 1334
HincII GTYRAC 3 cut(s) 483, 937, 1358
HindII GTYRAC 3 cut(s) 483, 937, 1358
HinfI GANTC 3 cut(s) 239, 527, 928
HpaII CCGG 1 cut(s) 63
HphI GGTGA 2 cut(s) 512, 739
Hpy166II GTNNAC 4 cut(s) 475, 483, 937, 1358
Hpy188I TCNGA 5 cut(s) 148, 213, 640, 845, 1045
Hpy188III TCNNGA 2 cut(s) 273, 290
Hpy8I GTNNAC 4 cut(s) 475, 483, 937, 1358
HpyAV CCTTC 3 cut(s) 658, 830, 1215
HpyCH4IV ACGT 3 cut(s) 114, 477, 784
HpyF10VI GCNNNNNNNGC 3 cut(s) 149, 158, 632
HpyF3I CTNAG 3 cut(s) 212, 670, 687
HpySE526I ACGT 3 cut(s) 114, 477, 784
Hsp92II CATG 6 cut(s) 175, 755, 943, 1089, 1168, 1334
Kzo9I GATC 4 cut(s) 292, 831, 904, 1267
LmnI GCTCC 2 cut(s) 56, 814
Lsp1109I GCAGC 1 cut(s) 374
LweI GCATC 2 cut(s) 139, 1237
MaeI CTAG 4 cut(s) 296, 372, 521, 746
MaeII ACGT 3 cut(s) 114, 477, 784
MaeIII GTNAC 1 cut(s) 869
MalI GATC 4 cut(s) 294, 833, 906, 1269
MboI GATC 4 cut(s) 292, 831, 904, 1267
MboII GAAGA 7 cut(s) 43, 122, 335, 525, 653, 1223, 1301
MflI RGATCY 1 cut(s) 292
MlyI GAGTC 1 cut(s) 521
MmeI TCCRAC 4 cut(s) 381, 414, 812, 1099
MnlI CCTC 4 cut(s) 207, 517, 541, 1131
Mph1103I ATGCAT 2 cut(s) 177, 1305
MseI TTAA 9 cut(s) 47, 98, 137, 354, 975, 1034, 1050, 1092, 1260
MspI CCGG 1 cut(s) 63
MspR9I CCNGG 2 cut(s) 1010, 1317
MvaI CCWGG 2 cut(s) 1010, 1317
MwoI GCNNNNNNNGC 3 cut(s) 149, 158, 632
NcoI CCATGG 1 cut(s) 1085
NdeI CATATG 1 cut(s) 850
NdeII GATC 4 cut(s) 292, 831, 904, 1267
NlaIII CATG 6 cut(s) 175, 755, 943, 1089, 1168, 1334
NlaIV GGNNCC 2 cut(s) 676, 816
NsiI ATGCAT 2 cut(s) 177, 1305
NspI RCATGY 4 cut(s) 175, 755, 1168, 1334
PaeI GCATGC 1 cut(s) 175
PfeI GAWTC 2 cut(s) 239, 928
PkrI GCNGC 1 cut(s) 364
PleI GAGTC 1 cut(s) 521
PmaCI CACGTG 1 cut(s) 478
PmlI CACGTG 1 cut(s) 478
PpsI GAGTC 1 cut(s) 521
Ppu21I YACGTR 1 cut(s) 478
PsiI TTATAA 1 cut(s) 650
Psp6I CCWGG 2 cut(s) 1008, 1315
PspCI CACGTG 1 cut(s) 478
PspGI CCWGG 2 cut(s) 1008, 1315
PspN4I GGNNCC 2 cut(s) 676, 816
PstI CTGCAG 1 cut(s) 364
PsuI RGATCY 1 cut(s) 292
RsaI GTAC 4 cut(s) 342, 695, 805, 1163
RsaNI GTAC 4 cut(s) 341, 694, 804, 1162
SalI GTCGAC 1 cut(s) 1356
SaqAI TTAA 9 cut(s) 47, 98, 137, 354, 975, 1034, 1050, 1092, 1260
SatI GCNGC 1 cut(s) 363
Sau3AI GATC 4 cut(s) 292, 831, 904, 1267
SchI GAGTC 1 cut(s) 521
ScrFI CCNGG 2 cut(s) 1010, 1317
SfaNI GCATC 2 cut(s) 139, 1237
SfcI CTRYAG 1 cut(s) 360
SphI GCATGC 1 cut(s) 175
SsiI CCGC 1 cut(s) 678
SspI AATATT 1 cut(s) 96
SspMI CTAG 4 cut(s) 296, 372, 521, 746
StyD4I CCNGG 2 cut(s) 1008, 1315
StyI CCWWGG 1 cut(s) 1085
TaiI ACGT 3 cut(s) 117, 480, 787
TaqI TCGA 3 cut(s) 834, 903, 1357
TatI WGTACW 3 cut(s) 340, 803, 1161
TfiI GAWTC 2 cut(s) 239, 928
Tru1I TTAA 9 cut(s) 47, 98, 137, 354, 975, 1034, 1050, 1092, 1260
Tru9I TTAA 9 cut(s) 47, 98, 137, 354, 975, 1034, 1050, 1092, 1260
TscAI CASTG 1 cut(s) 58
TseI GCWGC 1 cut(s) 362
TspDTI ATGAA 5 cut(s) 351, 396, 677, 1008, 1145
TspRI CASTG 1 cut(s) 58
XapI RAATTY 2 cut(s) 566, 949
XceI RCATGY 4 cut(s) 175, 755, 1168, 1334
XcmI CCANNNNNNNNNTGG 1 cut(s) 825
XmiI GTMKAC 1 cut(s) 1357
XspI CTAG 4 cut(s) 296, 372, 521, 746
Zsp2I ATGCAT 2 cut(s) 177, 1305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.