Rw2G043200

Catalyzes the reduction of fatty acyl-CoA to fatty alcohols

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
69566719 .. 69576511
9793 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G043200.1

Sequence Viewer

Length: 945 bp
ATGGATAAGAGGGTCAAGAAGATGCTTAGATTTGATTTTGAAGTAGTAGAAAAGAACCTAGTGAATGACAAATTGAATGAACTACAAAAACAAAATGCTTCAGAAGAAGTTATTACAAGTACGATGAAAGATCTCAGCATTGAAAGGGCTAAACTACATGGATGGCCAAACACCTATTCATTTACTAAGGCGATGGGGGAGGTACTTTTAACTCGTCAGTCTAAGAACAATCTACCTTTTGTTATTGTACGTCTACCTGTAGTTTCCAGCACATACAGTGAACCATTTCCAGGCTGGGTTCAAGGTTACAAAACTATTGATAGCATAATTGGTGGTTACTGTAAAGGGAAGCTCAGATTTCTACTGCTCGATCCTATGACAGTATGTGAAATGGTTCCTGTGGATATGGTGGTAAATTCAATAATAGTAGCCATTGTGGTGAATGCAAATAAGTCATCTGGCATCATTTACCATGTGGGAAGCTCACTAAGAAATCCTATAAAACTCTACGATATATGTGGTTTTATGTTCAAATACTTCACCAAATATCCATGGGTTAATAAGGATGAAAAGTCTATCGTAGTGAAGAAGATTTCAATATTCAAGACTAGGTCTACTTTTCATATGTACATGAAAATTCGCTACTCACTTCCTTTGAAGGGATTAAAGTTGGTGAACAAAGCATCTTGCCAATATTTTCAAGATGTATATGTCAAGTATAACCAGAAATTCAAATTGGCGATGCGCATGGTGGAGCTATACCGTCCCTATATGTTATTCAAGGGCATTCTAACAGACTCCAACACAGAGGACTTGCGAAAGATAACGAAAGAAGGTTATATAGAAGCAGAGAACTTTAATTTTGATCCGACATGCATTGATTGGGAAGACTATATTATGAACCGTCACATTCCAGGATTCCTGAAACATGTTCTAATCAAATGA

Protein Analysis

314

Amino Acids

36.64

Weight (kDa)

9.45

Isoelectric Point (pI)

34.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_4 PF07993 30 - 141 2.3e-24 Male sterility protein
Sterile PF03015 215 - 312 2.9e-13 Male sterility protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G44550 AT3G44550 AT3G44560 AT3G44560 AT3G44560
fragaria_vesca FvH4_3g09600 FvH4_3g24560 FvH4_3g24560 FvH4_3g24560 FvH4_3g24570 FvH4_3g24570 FvH4_3g38410 FvH4_3g38410 FvH4_3g38410 FvH4_5g01800 FvH4_7g07480 FvH4_7g07480
malus_domestica MD02G1239300.v1.1 MD03G1141400.v1.1 MD03G1141600.v1.1 MD03G1141700.v1.1 MD10G1066600.v1.1 MD11G1171600.v1.1
prunus_persica Prupe.6G126600_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126700_v2.0.a1 Prupe.6G126800_v2.0.a1
pyrus_communis pycom03g09610 pycom03g09620 pycom03g09650 pycom10g05210 pycom11g13330
rosa_chinensis RchiOBHm_Chr3g0483921 RchiOBHm_Chr5g0043321 RchiOBHm_Chr5g0044031 RchiOBHm_Chr5g0044071 RchiOBHm_Chr5g0069061 RchiOBHm_Chr5g0069111 RchiOBHm_Chr5g0069131 RchiOBHm_Chr6g0256891 RchiOBHm_Chr6g0256901 RchiOBHm_Chr7g0198821 RchiOBHm_Chr7g0198851 RchiOBHm_Chr7g0198861 RchiOBHm_Chr7g0219381 RchiOBHm_Chr7g0230491
rosa_laevigata RLG00000001491 RLG00000003837 RLG00000014654 RLG00000014655 RLG00000020958 RLG00000023252 RLG00000028966 RLG00000034179 RLG00000034211 RLG00000034236 RLG00000034238 RLG00000036034 RLG00000036038
rosa_multiflora Rmu_co8020118.1_g000001 Rmu_sc0000060.1_g000002 Rmu_sc0000060.1_g000026 Rmu_sc0001157.1_g000010 Rmu_sc0001157.1_g000016 Rmu_sc0002252.1_g000009 Rmu_sc0003076.1_g000025 Rmu_sc0008623.1_g000018 Rmu_sc0008623.1_g000021 Rmu_sc0022203.1_g000001
rosa_roxburghii Rroxscaffold_1G00036940 Rroxscaffold_1G00036990 Rroxscaffold_3G00230110 Rroxscaffold_3G00257340 Rroxscaffold_3G00257380 Rroxscaffold_6G00398020 Rroxscaffold_6G00398040 Rroxscaffold_7G00208240 Rroxscaffold_7G00208260
rosa_rugosa Rorug01G0059500 Rorug03G0208700 Rorug03G0208700 Rorug03G0208800 Rorug03G0208900 Rorug03G0208900 Rorug04G0119300 Rorug05G0210300 Rorug05G0210300 Rorug05G0395800 Rorug05G0396000 Rorug05G0396100 Rorug05G0396200 Rorug05G0577200 Rorug07G0050100 Rorug07G0050200 Rorug07G0215200
rosa_samantha Rh1BG061200 Rh2BG536700 Rh2DG545600 Rh3AG257500 Rh3BG294300 Rh3BG322600 Rh3CG292100 Rh3DG287300 Rh4BG178300 Rh5AG290800 Rh5AG291000 Rh5AG294200 Rh5AG294300 Rh5BG297400 Rh5BG302600 Rh5BG303000 Rh5CG329900 Rh5CG330100 Rh5DG307000 Rh5DG311500 Rh5DG311700 Rh6AG095800 Rh6BG086800 Rh6BG086900 Rh6CG082900 Rh6DG078600 Rh6DG078700 Rh7AG173700 Rh7AG174000 Rh7AG174100 Rh7AG327500 Rh7AG412100 Rh7BG177100 Rh7CG182900 Rh7CG183100 Rh7CG344800 Rh7CG429900 Rh7DG176600
rosa_wichuraiana Rw0G003880 Rw0G006090 Rw2G043200 Rw3G023270 Rw3G023310 Rw5G026990 Rw5G027280 Rw5G027300 Rw5G042270 Rw6G008160 Rw7G015210 Rw7G015230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 746
AccI GTMKAC 2 cut(s) 253, 614
AclWI GGATC 2 cut(s) 365, 860
AcoI YGGCCR 1 cut(s) 164
AcsI RAATTY 3 cut(s) 415, 636, 728
AcuI CTGAAG 1 cut(s) 84
AfaI GTAC 4 cut(s) 121, 204, 249, 629
AfiI CCNNNNNNNGG 2 cut(s) 290, 659
AflIII ACRYGT 1 cut(s) 928
AjnI CCWGG 2 cut(s) 289, 913
AjuI GAANNNNNNNTTGG 4 cut(s) 160, 192, 719, 751
AluBI AGCT 3 cut(s) 352, 483, 757
AluI AGCT 3 cut(s) 352, 483, 757
AlwI GGATC 2 cut(s) 365, 860
AoxI GGCC 1 cut(s) 164
ApoI RAATTY 3 cut(s) 415, 636, 728
Asp700I GAANNNNTTC 2 cut(s) 285, 393
AspLEI GCGC 1 cut(s) 747
AsuHPI GGTGA 3 cut(s) 451, 532, 685
BalI TGGCCA 1 cut(s) 166
BbsI GAAGAC 1 cut(s) 894
BccI CCATC 2 cut(s) 156, 187
BciT130I CCWGG 2 cut(s) 291, 915
BfaI CTAG 2 cut(s) 59, 609
BfmI CTRYAG 1 cut(s) 258
BglII AGATCT 1 cut(s) 130
Bme1390I CCNGG 2 cut(s) 291, 915
BmiI GGNNCC 1 cut(s) 396
BmrFI CCNGG 2 cut(s) 291, 915
BmsI GCATC 4 cut(s) 12, 471, 692, 732
BpiI GAAGAC 1 cut(s) 894
BsaJI CCNNGG 1 cut(s) 551
Bsc4I CCNNNNNNNGG 2 cut(s) 290, 659
BseBI CCWGG 2 cut(s) 291, 915
BseDI CCNNGG 1 cut(s) 551
BseGI GGATG 2 cut(s) 167, 571
BseLI CCNNNNNNNGG 2 cut(s) 290, 659
BseMII CTCAG 2 cut(s) 148, 367
BseYI CCCAGC 1 cut(s) 294
BshFI GGCC 1 cut(s) 166
BslFI GGGAC 1 cut(s) 750
BslI CCNNNNNNNGG 2 cut(s) 290, 659
BsmFI GGGAC 1 cut(s) 750
BsmI GAATGC 2 cut(s) 448, 786
BsnI GGCC 1 cut(s) 166
Bsp1407I TGTACA 1 cut(s) 627
Bsp143I GATC 3 cut(s) 130, 370, 865
Bsp19I CCATGG 1 cut(s) 551
BspANI GGCC 1 cut(s) 166
BspCNI CTCAG 2 cut(s) 147, 366
BspLI GGNNCC 1 cut(s) 396
BspPI GGATC 2 cut(s) 365, 860
BsrGI TGTACA 1 cut(s) 627
BssECI CCNNGG 1 cut(s) 551
BssMI GATC 3 cut(s) 130, 370, 865
BssT1I CCWWGG 1 cut(s) 551
Bst2UI CCWGG 2 cut(s) 291, 915
Bst4CI ACNGT 5 cut(s) 278, 341, 382, 764, 905
BstAUI TGTACA 1 cut(s) 627
BstDEI CTNAG 6 cut(s) 26, 134, 186, 222, 353, 488
BstDSI CCRYGG 1 cut(s) 551
BstF5I GGATG 2 cut(s) 167, 571
BstHHI GCGC 1 cut(s) 747
BstKTI GATC 3 cut(s) 133, 373, 868
BstMBI GATC 3 cut(s) 130, 370, 865
BstNI CCWGG 2 cut(s) 291, 915
BstNSI RCATGY 2 cut(s) 876, 932
BstSCI CCNGG 2 cut(s) 289, 913
BstSFI CTRYAG 1 cut(s) 258
BstV2I GAAGAC 1 cut(s) 894
BstX2I RGATCY 1 cut(s) 130
BstYI RGATCY 1 cut(s) 130
BsuRI GGCC 1 cut(s) 166
BtgI CCRYGG 1 cut(s) 551
BtgZI GCGATG 2 cut(s) 206, 755
BtsCI GGATG 2 cut(s) 167, 571
BtsIMutI CAGTG 1 cut(s) 283
CfoI GCGC 1 cut(s) 747
Csp6I GTAC 4 cut(s) 120, 203, 248, 628
CviAII CATG 7 cut(s) 158, 473, 552, 631, 748, 873, 929
CviJI RGCY 7 cut(s) 149, 166, 294, 352, 431, 483, 757
CviKI_1 RGCY 7 cut(s) 149, 166, 294, 352, 431, 483, 757
CviQI GTAC 4 cut(s) 120, 203, 248, 628
DdeI CTNAG 6 cut(s) 26, 134, 186, 222, 353, 488
DpnI GATC 3 cut(s) 132, 372, 867
DpnII GATC 3 cut(s) 130, 370, 865
EaeI YGGCCR 1 cut(s) 164
Eco130I CCWWGG 1 cut(s) 551
Eco57I CTGAAG 1 cut(s) 84
EcoRII CCWGG 2 cut(s) 289, 913
EcoT14I CCWWGG 1 cut(s) 551
EcoT22I ATGCAT 1 cut(s) 878
ErhI CCWWGG 1 cut(s) 551
FaeI CATG 7 cut(s) 161, 476, 555, 634, 751, 876, 932
FaqI GGGAC 1 cut(s) 750
FatI CATG 7 cut(s) 157, 472, 551, 630, 747, 872, 928
FauNDI CATATG 1 cut(s) 624
FblI GTMKAC 2 cut(s) 253, 614
FokI GGATG 2 cut(s) 174, 578
FspAI RTGCGCAY 1 cut(s) 746
FspBI CTAG 2 cut(s) 59, 609
FspI TGCGCA 1 cut(s) 746
GlaI GCGC 1 cut(s) 746
GsaI CCCAGC 1 cut(s) 298
HaeIII GGCC 1 cut(s) 166
HhaI GCGC 1 cut(s) 747
Hin1II CATG 7 cut(s) 161, 476, 555, 634, 751, 876, 932
Hin6I GCGC 1 cut(s) 745
HinP1I GCGC 1 cut(s) 745
HinfI GANTC 2 cut(s) 797, 918
HphI GGTGA 3 cut(s) 451, 532, 685
Hpy166II GTNNAC 4 cut(s) 254, 281, 615, 676
Hpy188I TCNGA 3 cut(s) 103, 356, 870
Hpy188III TCNNGA 4 cut(s) 16, 604, 701, 922
Hpy8I GTNNAC 4 cut(s) 254, 281, 615, 676
HpyAV CCTTC 2 cut(s) 652, 827
HpyCH4III ACNGT 5 cut(s) 278, 341, 382, 764, 905
HpyCH4IV ACGT 1 cut(s) 250
HpyCH4V TGCA 2 cut(s) 446, 876
HpyF3I CTNAG 6 cut(s) 26, 134, 186, 222, 353, 488
HpySE526I ACGT 1 cut(s) 250
Hsp92II CATG 7 cut(s) 161, 476, 555, 634, 751, 876, 932
HspAI GCGC 1 cut(s) 745
Kzo9I GATC 3 cut(s) 130, 370, 865
LmnI GCTCC 1 cut(s) 754
LweI GCATC 4 cut(s) 12, 471, 692, 732
MaeI CTAG 2 cut(s) 59, 609
MaeII ACGT 1 cut(s) 250
MaeIII GTNAC 3 cut(s) 305, 335, 905
MalI GATC 3 cut(s) 132, 372, 867
MboI GATC 3 cut(s) 130, 370, 865
MboII GAAGA 5 cut(s) 31, 116, 598, 601, 899
MflI RGATCY 1 cut(s) 130
MlsI TGGCCA 1 cut(s) 166
MluCI AATT 7 cut(s) 71, 327, 415, 636, 728, 734, 859
MluNI TGGCCA 1 cut(s) 166
MlyI GAGTC 1 cut(s) 791
MmeI TCCRAC 2 cut(s) 825, 893
MnlI CCTC 3 cut(s) 3, 193, 802
Mox20I TGGCCA 1 cut(s) 166
Mph1103I ATGCAT 1 cut(s) 878
MroXI GAANNNNTTC 2 cut(s) 285, 393
MscI TGGCCA 1 cut(s) 166
MseI TTAA 4 cut(s) 209, 558, 665, 858
MslI CAYNNNNRTG 1 cut(s) 437
Msp20I TGGCCA 1 cut(s) 166
MspR9I CCNGG 2 cut(s) 291, 915
Mva1269I GAATGC 2 cut(s) 448, 786
MvaI CCWGG 2 cut(s) 291, 915
NcoI CCATGG 1 cut(s) 551
NdeI CATATG 1 cut(s) 624
NdeII GATC 3 cut(s) 130, 370, 865
NlaIII CATG 7 cut(s) 161, 476, 555, 634, 751, 876, 932
NlaIV GGNNCC 1 cut(s) 396
NmuCI GTSAC 1 cut(s) 905
NsbI TGCGCA 1 cut(s) 746
NsiI ATGCAT 1 cut(s) 878
NspI RCATGY 2 cut(s) 876, 932
PciI ACATGT 1 cut(s) 928
PctI GAATGC 2 cut(s) 448, 786
PdmI GAANNNNTTC 2 cut(s) 285, 393
PfeI GAWTC 1 cut(s) 918
PflFI GACNNNGTC 1 cut(s) 610
PfoI TCCNGGA 1 cut(s) 913
PleI GAGTC 1 cut(s) 791
PpsI GAGTC 1 cut(s) 791
PscI ACATGT 1 cut(s) 928
Psp6I CCWGG 2 cut(s) 289, 913
PspFI CCCAGC 1 cut(s) 294
PspGI CCWGG 2 cut(s) 289, 913
PspN4I GGNNCC 1 cut(s) 396
PsuI RGATCY 1 cut(s) 130
PsyI GACNNNGTC 1 cut(s) 610
RsaI GTAC 4 cut(s) 121, 204, 249, 629
RsaNI GTAC 4 cut(s) 120, 203, 248, 628
RseI CAYNNNNRTG 1 cut(s) 437
SaqAI TTAA 4 cut(s) 209, 558, 665, 858
Sau3AI GATC 3 cut(s) 130, 370, 865
SchI GAGTC 1 cut(s) 791
ScrFI CCNGG 2 cut(s) 291, 915
SfaNI GCATC 4 cut(s) 12, 471, 692, 732
SfcI CTRYAG 1 cut(s) 258
SmiMI CAYNNNNRTG 1 cut(s) 437
Sse9I AATT 7 cut(s) 71, 327, 415, 636, 728, 734, 859
SspI AATATT 2 cut(s) 600, 695
SspMI CTAG 2 cut(s) 59, 609
StyD4I CCNGG 2 cut(s) 289, 913
StyI CCWWGG 1 cut(s) 551
TaaI ACNGT 5 cut(s) 278, 341, 382, 764, 905
TaiI ACGT 1 cut(s) 253
TaqI TCGA 1 cut(s) 369
TasI AATT 7 cut(s) 71, 327, 415, 636, 728, 734, 859
TatI WGTACW 1 cut(s) 627
TfiI GAWTC 1 cut(s) 918
Tru1I TTAA 4 cut(s) 209, 558, 665, 858
Tru9I TTAA 4 cut(s) 209, 558, 665, 858
TscAI CASTG 1 cut(s) 283
TseFI GTSAC 1 cut(s) 905
Tsp45I GTSAC 1 cut(s) 905
TspDTI ATGAA 7 cut(s) 93, 140, 168, 582, 611, 647, 914
TspRI CASTG 1 cut(s) 283
Tth111I GACNNNGTC 1 cut(s) 610
XapI RAATTY 3 cut(s) 415, 636, 728
XceI RCATGY 2 cut(s) 876, 932
XcmI CCANNNNNNNNNTGG 1 cut(s) 291
XmiI GTMKAC 2 cut(s) 253, 614
XmnI GAANNNNTTC 2 cut(s) 285, 393
XspI CTAG 2 cut(s) 59, 609
Zsp2I ATGCAT 1 cut(s) 878
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.